Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91122.t1 | XP_003589763.1 | 94.6 | 409 | 22 | 0 | 20 | 428 | 38 | 446 | 1.50E-230 | 808.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91122.t1 | Q55DP8 | 46.9 | 397 | 194 | 8 | 20 | 409 | 15 | 401 | 3.7e-97 | 356.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91122.t1 | G7IBI0 | 94.6 | 409 | 22 | 0 | 20 | 428 | 38 | 446 | 1.1e-230 | 808.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65894 | MS.gene91122 | PPI |
| MS.gene91122 | MS.gene94073 | PPI |
| MS.gene99939 | MS.gene91122 | PPI |
| MS.gene053778 | MS.gene91122 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91122.t1 | MTR_1g039010 | 94.621 | 409 | 22 | 0 | 20 | 428 | 38 | 446 | 0.0 | 814 |
| MS.gene91122.t1 | MTR_1g038920 | 84.597 | 409 | 63 | 0 | 20 | 428 | 41 | 449 | 0.0 | 718 |
| MS.gene91122.t1 | MTR_1g038920 | 83.981 | 412 | 63 | 1 | 20 | 428 | 41 | 452 | 0.0 | 712 |
| MS.gene91122.t1 | MTR_5g058430 | 56.509 | 338 | 147 | 0 | 69 | 406 | 4 | 341 | 9.57e-143 | 411 |
| MS.gene91122.t1 | MTR_0400s0010 | 85.876 | 177 | 22 | 1 | 218 | 391 | 1 | 177 | 7.27e-108 | 316 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91122.t1 | AT4G38220 | 68.949 | 409 | 119 | 2 | 20 | 428 | 30 | 430 | 0.0 | 602 |
| MS.gene91122.t1 | AT4G38220 | 68.447 | 412 | 119 | 3 | 20 | 428 | 30 | 433 | 0.0 | 597 |
| MS.gene91122.t1 | AT1G44820 | 57.431 | 397 | 169 | 0 | 20 | 416 | 35 | 431 | 0.0 | 511 |
| MS.gene91122.t1 | AT1G44180 | 57.431 | 397 | 169 | 0 | 20 | 416 | 37 | 433 | 2.60e-178 | 505 |
| MS.gene91122.t1 | AT1G44180 | 57.431 | 397 | 169 | 0 | 20 | 416 | 37 | 433 | 2.60e-178 | 505 |
| MS.gene91122.t1 | AT1G44180 | 57.431 | 397 | 169 | 0 | 20 | 416 | 37 | 433 | 2.60e-178 | 505 |
Find 120 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTAAGAGGACTGTTTATT+TGG | 0.186701 | 1.3:+22112979 | MS.gene91122:CDS |
| GATGATGAAGGAAGGATTTA+TGG | 0.212624 | 1.3:+22112878 | MS.gene91122:CDS |
| GGGAGTTGGCTTGTGTTATT+AGG | 0.222795 | 1.3:-22112688 | None:intergenic |
| CTTCTCCGGATGAGCATTAC+AGG | 0.286955 | 1.3:+22114312 | MS.gene91122:CDS |
| CTGATACGAATTCGATGGTT+TGG | 0.317592 | 1.3:-22112724 | None:intergenic |
| ACTTGCTCATAACTCATCTT+TGG | 0.320089 | 1.3:-22116523 | None:intergenic |
| GGCTGGTGATCAAAGCCGTT+GGG | 0.328468 | 1.3:+22114363 | MS.gene91122:CDS |
| TTTGGTGAAGACTGGTTTCC+CGG | 0.337727 | 1.3:-22115551 | None:intergenic |
| TGAAGCTATTAGGAGGCTTA+AGG | 0.363093 | 1.3:+22112943 | MS.gene91122:CDS |
| ACCAAATAAACAGTCCTCTT+AGG | 0.367447 | 1.3:-22112980 | None:intergenic |
| ATAAACAGGGCTGGCTTCTC+CGG | 0.367977 | 1.3:+22114298 | MS.gene91122:intron |
| CAAACCATCGAATTCGTATC+AGG | 0.368098 | 1.3:+22112725 | MS.gene91122:CDS |
| ATCAAAGCCGTTGGGGCTCC+AGG | 0.372650 | 1.3:+22114371 | MS.gene91122:CDS |
| TGATACGAATTCGATGGTTT+GGG | 0.373353 | 1.3:-22112723 | None:intergenic |
| CTGGTAGACTGAGTGTAGTT+TGG | 0.387176 | 1.3:-22112662 | None:intergenic |
| GAGCATTACAGGGCATTCTA+TGG | 0.390291 | 1.3:+22114323 | MS.gene91122:CDS |
| CGAATTCGATGGTTTGGGAT+TGG | 0.391937 | 1.3:-22112718 | None:intergenic |
| GGCTTGTGTTATTAGGAAAC+TGG | 0.392111 | 1.3:-22112681 | None:intergenic |
| TCCCACTTGTCGTGCTCGGC+GGG | 0.401516 | 1.3:-22112830 | None:intergenic |
| AATCTTGGATTGCCGACAAT+TGG | 0.404897 | 1.3:+22115688 | MS.gene91122:CDS |
| TTTGCTCCTGATGAGGAGAT+TGG | 0.412203 | 1.3:+22113004 | MS.gene91122:CDS |
| CAGCCATCTGAAGCTGAAGC+TGG | 0.414163 | 1.3:+22115059 | MS.gene91122:CDS |
| GAAGCTATTAGGAGGCTTAA+GGG | 0.415102 | 1.3:+22112944 | MS.gene91122:CDS |
| TGCAGTATCTTGAAGCTATT+AGG | 0.416175 | 1.3:+22112933 | MS.gene91122:CDS |
| TGGATTGGAACTGTCAGTTT+TGG | 0.419255 | 1.3:-22115569 | None:intergenic |
| AGCATAATGGATGGAAGGTC+TGG | 0.419913 | 1.3:-22112785 | None:intergenic |
| AACTGCTGATACAAAATCAT+TGG | 0.425634 | 1.3:+22115103 | MS.gene91122:CDS |
| TAAAGCTTGGACCCATGTCC+TGG | 0.432681 | 1.3:-22114389 | None:intergenic |
| GTCCATTTGAGAAGGATTAG+TGG | 0.437705 | 1.3:-22112752 | None:intergenic |
| ATATCTGTGCATGATGCGTC+CGG | 0.443659 | 1.3:+22115532 | MS.gene91122:CDS |
| ATACAATTTGTACACGTTTG+AGG | 0.443672 | 1.3:+22112441 | MS.gene91122:CDS |
| GCCGTTGGGGCTCCAGGACA+TGG | 0.444312 | 1.3:+22114377 | MS.gene91122:CDS |
| ATTGTGAGGTGCGGTACCTT+TGG | 0.445404 | 1.3:-22114457 | None:intergenic |
| TAACAATGCCCACCATGGAT+TGG | 0.452495 | 1.3:-22115584 | None:intergenic |
| AGCCACTAATCCTTCTCAAA+TGG | 0.454799 | 1.3:+22112750 | MS.gene91122:CDS |
| GACTGAGTGTAGTTTGGAGT+TGG | 0.459119 | 1.3:-22112656 | None:intergenic |
| TGCCCACCAATCTCCTCATC+AGG | 0.459300 | 1.3:-22113010 | None:intergenic |
| ACAAAACTGAATACTTGAAA+GGG | 0.463617 | 1.3:+22116433 | MS.gene91122:CDS |
| AGCAGAATTATCATAAAGCT+TGG | 0.468785 | 1.3:-22114402 | None:intergenic |
| CACAAAACTGAATACTTGAA+AGG | 0.469759 | 1.3:+22116432 | MS.gene91122:CDS |
| GGATTGGAGTGAGAGGGAGT+TGG | 0.471183 | 1.3:-22112702 | None:intergenic |
| TGGAGTTCCAGCCTTCAAAA+AGG | 0.477753 | 1.3:-22114537 | None:intergenic |
| TATTAGGAGGCTTAAGGGAT+GGG | 0.494392 | 1.3:+22112949 | MS.gene91122:CDS |
| TGGCTGGTGATCAAAGCCGT+TGG | 0.496755 | 1.3:+22114362 | MS.gene91122:CDS |
| AATGCCCTGTAATGCTCATC+CGG | 0.497131 | 1.3:-22114317 | None:intergenic |
| TTGTGGTCATGGAGTAGAAT+GGG | 0.501280 | 1.3:-22115733 | None:intergenic |
| GCTTTATGATAATTCTGCTA+TGG | 0.512050 | 1.3:+22114406 | MS.gene91122:CDS |
| CGTTTGAGGTTGTCAAAGCC+AGG | 0.512198 | 1.3:+22112455 | MS.gene91122:CDS |
| GATGGGGATTTCAGCCTAAG+AGG | 0.513820 | 1.3:+22112966 | MS.gene91122:CDS |
| TGAGAGTAGAGCATAATGGA+TGG | 0.515103 | 1.3:-22112794 | None:intergenic |
| CCCATGTCCTGGAGCCCCAA+CGG | 0.515485 | 1.3:-22114378 | None:intergenic |
| GATTTATGGAAGAGGGTCAC+AGG | 0.520997 | 1.3:+22112892 | MS.gene91122:CDS |
| AGAGAGGAGCCCGTGGTGGC+TGG | 0.525075 | 1.3:+22114346 | MS.gene91122:CDS |
| AAGGAAGGATTTATGGAAGA+GGG | 0.525427 | 1.3:+22112885 | MS.gene91122:CDS |
| TTGTTCCTGTCCATTTGAGA+AGG | 0.530486 | 1.3:-22112760 | None:intergenic |
| CTTTGATCACCAGCCACCAC+GGG | 0.533837 | 1.3:-22114355 | None:intergenic |
| ATGATCCCACTTGTCGTGCT+CGG | 0.536205 | 1.3:-22112834 | None:intergenic |
| CTCACAATTCGACTTGATCA+AGG | 0.536874 | 1.3:+22114472 | MS.gene91122:CDS |
| GACAATTGGATTCTCACCTA+TGG | 0.538385 | 1.3:+22115702 | MS.gene91122:CDS |
| AAAGACATATTGCGCGAAGT+AGG | 0.538593 | 1.3:-22115152 | None:intergenic |
| TCATCCACATGGGCTTCAAA+CGG | 0.541420 | 1.3:-22112860 | None:intergenic |
| GCTCCTGATGAGGAGATTGG+TGG | 0.542503 | 1.3:+22113007 | MS.gene91122:CDS |
| AAGCGTCCATCTGTGGAGGC+AGG | 0.544453 | 1.3:-22115658 | None:intergenic |
| CAATTCGACTTGATCAAGGC+CGG | 0.544976 | 1.3:+22114476 | MS.gene91122:CDS |
| ATTGTGGTCATGGAGTAGAA+TGG | 0.545521 | 1.3:-22115734 | None:intergenic |
| GAAGGAAGGATTTATGGAAG+AGG | 0.546972 | 1.3:+22112884 | MS.gene91122:CDS |
| ATTAGGAGGCTTAAGGGATG+GGG | 0.548007 | 1.3:+22112950 | MS.gene91122:CDS |
| CTTTCCTGATACGAATTCGA+TGG | 0.548307 | 1.3:-22112729 | None:intergenic |
| ATCACTTCCATGTTCATCAA+AGG | 0.549613 | 1.3:-22116493 | None:intergenic |
| CCCATGTGGATGATGAAGGA+AGG | 0.550956 | 1.3:+22112870 | MS.gene91122:CDS |
| CTAATCCTTCTCAAATGGAC+AGG | 0.555270 | 1.3:+22112755 | MS.gene91122:CDS |
| TGGTTTGGGATTGGAGTGAG+AGG | 0.563120 | 1.3:-22112709 | None:intergenic |
| CTCCTGATGAGGAGATTGGT+GGG | 0.565880 | 1.3:+22113008 | MS.gene91122:CDS |
| GAGGAGATTGGTGGGCATGA+TGG | 0.565892 | 1.3:+22113016 | MS.gene91122:CDS |
| GAGTGTAGTTTGGAGTTGGA+TGG | 0.570690 | 1.3:-22112652 | None:intergenic |
| TATCTGTGCATGATGCGTCC+GGG | 0.571204 | 1.3:+22115533 | MS.gene91122:CDS |
| TCCCCGCCGAGCACGACAAG+TGG | 0.577788 | 1.3:+22112828 | MS.gene91122:CDS |
| ATCCCACTTGTCGTGCTCGG+CGG | 0.581557 | 1.3:-22112831 | None:intergenic |
| TCCTTCCTTCATCATCCACA+TGG | 0.582261 | 1.3:-22112871 | None:intergenic |
| GGTTTGGGATTGGAGTGAGA+GGG | 0.583038 | 1.3:-22112708 | None:intergenic |
| TCACAGGATATGAAATGTGT+TGG | 0.583308 | 1.3:+22112908 | MS.gene91122:CDS |
| GGTTGACTTACTGTTGGTGA+TGG | 0.584190 | 1.3:-22114557 | None:intergenic |
| GAGGCGAATTGCTGAAGAGT+GGG | 0.587890 | 1.3:+22115127 | MS.gene91122:CDS |
| CTATTAGGAGGCTTAAGGGA+TGG | 0.590583 | 1.3:+22112948 | MS.gene91122:CDS |
| TATGCATCCTTTGATGAACA+TGG | 0.592492 | 1.3:+22116486 | MS.gene91122:CDS |
| ATAGGTGAGAATCCAATTGT+CGG | 0.592933 | 1.3:-22115700 | None:intergenic |
| AGTAGAGCATAATGGATGGA+AGG | 0.593746 | 1.3:-22112790 | None:intergenic |
| GAAGCCCATGTGGATGATGA+AGG | 0.596013 | 1.3:+22112866 | MS.gene91122:CDS |
| AATCCAGCTTCAGCTTCAGA+TGG | 0.598480 | 1.3:-22115062 | None:intergenic |
| AAACTGACAGTTCCAATCCA+TGG | 0.601500 | 1.3:+22115572 | MS.gene91122:CDS |
| GCTTTGATCACCAGCCACCA+CGG | 0.601669 | 1.3:-22114356 | None:intergenic |
| AGAATGGGAGTGTTTGCCAT+AGG | 0.604592 | 1.3:-22115718 | None:intergenic |
| AGTGTGAGAGTAGAGCATAA+TGG | 0.606810 | 1.3:-22112798 | None:intergenic |
| CCCCGCCGAGCACGACAAGT+GGG | 0.610171 | 1.3:+22112829 | MS.gene91122:CDS |
| CCGTTGGGGCTCCAGGACAT+GGG | 0.610540 | 1.3:+22114378 | MS.gene91122:CDS |
| CCCACTTGTCGTGCTCGGCG+GGG | 0.615711 | 1.3:-22112829 | None:intergenic |
| GCTGGTGATCAAAGCCGTTG+GGG | 0.621458 | 1.3:+22114364 | MS.gene91122:CDS |
| GTTGGTGTAGTGCTTGATGA+AGG | 0.623673 | 1.3:+22113082 | MS.gene91122:CDS |
| ATGCTGTCGAAGAGGCTGGT+GGG | 0.624106 | 1.3:+22115611 | MS.gene91122:CDS |
| ATCTCCGTCAGCTTTCAAGC+CGG | 0.626830 | 1.3:-22114495 | None:intergenic |
| AATGCTGTCGAAGAGGCTGG+TGG | 0.631642 | 1.3:+22115610 | MS.gene91122:CDS |
| AGATGTTGTGTCTATTAACA+TGG | 0.632370 | 1.3:+22114514 | MS.gene91122:CDS |
| TGACAGTTCCAATCCATGGT+GGG | 0.633440 | 1.3:+22115576 | MS.gene91122:CDS |
| AGTATCTTGAAGCTATTAGG+AGG | 0.635913 | 1.3:+22112936 | MS.gene91122:CDS |
| TCTACTCCATGACCACAATG+AGG | 0.639705 | 1.3:+22115738 | MS.gene91122:CDS |
| CCTTCCTTCATCATCCACAT+GGG | 0.640538 | 1.3:-22112870 | None:intergenic |
| AGAGGCGAATTGCTGAAGAG+TGG | 0.646393 | 1.3:+22115126 | MS.gene91122:CDS |
| ACAGGGCATTCTATGGAGAG+AGG | 0.650910 | 1.3:+22114330 | MS.gene91122:CDS |
| CTGATACAAAATCATTGGAG+AGG | 0.650969 | 1.3:+22115108 | MS.gene91122:CDS |
| AAGGCCGGCTTGAAAGCTGA+CGG | 0.653018 | 1.3:+22114491 | MS.gene91122:CDS |
| TTGTCGGCAATCCAAGATTG+CGG | 0.655026 | 1.3:-22115684 | None:intergenic |
| ATGGAGAGAGGAGCCCGTGG+TGG | 0.659419 | 1.3:+22114342 | MS.gene91122:CDS |
| CTGACAGTTCCAATCCATGG+TGG | 0.664549 | 1.3:+22115575 | MS.gene91122:CDS |
| CTTGATCAAGTCGAATTGTG+AGG | 0.676306 | 1.3:-22114471 | None:intergenic |
| TTCTCCGGATGAGCATTACA+GGG | 0.677025 | 1.3:+22114313 | MS.gene91122:CDS |
| TCATCCGTTTGAAGCCCATG+TGG | 0.677166 | 1.3:+22112856 | MS.gene91122:CDS |
| AGAGTATTGAAAGCATCCAA+AGG | 0.678043 | 1.3:+22114441 | MS.gene91122:CDS |
| TCTATGGAGAGAGGAGCCCG+TGG | 0.679052 | 1.3:+22114339 | MS.gene91122:CDS |
| TCAAGTCGAATTGTGAGGTG+CGG | 0.696697 | 1.3:-22114466 | None:intergenic |
| ATGAACATGGAAGTGATGCA+AGG | 0.707843 | 1.3:+22116499 | MS.gene91122:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGATTAATCATATAATA+AGG | - | chr1.3:22114854-22114873 | None:intergenic | 10.0% |
| !!! | GTTTGAAATTTTTAAAAAAT+TGG | + | chr1.3:22113497-22113516 | MS.gene91122:intron | 10.0% |
| !! | AATTCAATTATACTTTGTAA+TGG | + | chr1.3:22114872-22114891 | MS.gene91122:intron | 15.0% |
| !! | ATACTTGAAATTTGAAAAAT+AGG | + | chr1.3:22113407-22113426 | MS.gene91122:intron | 15.0% |
| !! | TACTTGAAATTTGAAAAATA+GGG | + | chr1.3:22113408-22113427 | MS.gene91122:intron | 15.0% |
| !! | TTAATCATATAATAAGGAAA+AGG | - | chr1.3:22114848-22114867 | None:intergenic | 15.0% |
| !!! | ATAGTTTTTTGAAAACTTTT+AGG | + | chr1.3:22113469-22113488 | MS.gene91122:intron | 15.0% |
| !!! | TGCAATTTTTCAAATTTTTA+GGG | + | chr1.3:22113438-22113457 | MS.gene91122:intron | 15.0% |
| !!! | TTGCAATTTTTCAAATTTTT+AGG | + | chr1.3:22113437-22113456 | MS.gene91122:intron | 15.0% |
| !!! | TTTTCATTTACAAATAAACA+GGG | + | chr1.3:22114285-22114304 | MS.gene91122:intron | 15.0% |
| !!! | TTTTTCATTTACAAATAAAC+AGG | + | chr1.3:22114284-22114303 | MS.gene91122:intron | 15.0% |
| !!! | TTTTTTAAAATTTTGCAAGT+TGG | - | chr1.3:22113525-22113544 | None:intergenic | 15.0% |
| !! | ATAAAAATATAAAGCGAAGT+GGG | - | chr1.3:22115197-22115216 | None:intergenic | 20.0% |
| !! | CTATAAAATGTGAATATCAT+TGG | - | chr1.3:22113558-22113577 | None:intergenic | 20.0% |
| !! | TAAAATTTACTCAAGGTTAA+TGG | + | chr1.3:22113764-22113783 | MS.gene91122:intron | 20.0% |
| !! | TAGTGAATAAAATTTACTCA+AGG | + | chr1.3:22113757-22113776 | MS.gene91122:intron | 20.0% |
| !! | TATTAATTATACATCTGTGT+GGG | + | chr1.3:22115992-22116011 | MS.gene91122:intron | 20.0% |
| !! | TATTGTGTATTTACAATACA+TGG | - | chr1.3:22115223-22115242 | None:intergenic | 20.0% |
| !! | TTAGAGGAAAAATCTAATAA+GGG | - | chr1.3:22115481-22115500 | None:intergenic | 20.0% |
| !! | TTATTAATTATACATCTGTG+TGG | + | chr1.3:22115991-22116010 | MS.gene91122:intron | 20.0% |
| !!! | AAAATATCAGTTTTATCTCA+AGG | - | chr1.3:22113950-22113969 | None:intergenic | 20.0% |
| !!! | AATCGGAAATTTAGAATTTT+AGG | + | chr1.3:22113264-22113283 | MS.gene91122:intron | 20.0% |
| !!! | ATTTCAAATTTCTAGCTTTT+AGG | + | chr1.3:22113590-22113609 | MS.gene91122:intron | 20.0% |
| !!! | CATTTCTAAATGTTTTTGTT+TGG | + | chr1.3:22113316-22113335 | MS.gene91122:intron | 20.0% |
| !!! | GCAATTTTTCAAATTTTTAG+GGG | + | chr1.3:22113439-22113458 | MS.gene91122:intron | 20.0% |
| !!! | TATTCACATTTTATAGAGTA+AGG | + | chr1.3:22113562-22113581 | MS.gene91122:intron | 20.0% |
| !!! | TCATTTTCTCAAATTATTGT+TGG | - | chr1.3:22115863-22115882 | None:intergenic | 20.0% |
| ! | AAATAGTAAAGCAATCCAAT+TGG | + | chr1.3:22113674-22113693 | MS.gene91122:intron | 25.0% |
| ! | ACAAAACTGAATACTTGAAA+GGG | + | chr1.3:22116433-22116452 | MS.gene91122:CDS | 25.0% |
| ! | AGAAATTTGATCAACTATCA+AGG | + | chr1.3:22114965-22114984 | MS.gene91122:intron | 25.0% |
| ! | ATACAATACAATCATTACAG+AGG | - | chr1.3:22114998-22115017 | None:intergenic | 25.0% |
| ! | GATAAAAATATAAAGCGAAG+TGG | - | chr1.3:22115198-22115217 | None:intergenic | 25.0% |
| ! | GATAAAATTACAGAAGATGA+AGG | - | chr1.3:22115350-22115369 | None:intergenic | 25.0% |
| ! | GATACAACCAAAAAACAATA+AGG | - | chr1.3:22116327-22116346 | None:intergenic | 25.0% |
| ! | GTATAATTCAGTGTAATCAT+AGG | + | chr1.3:22115885-22115904 | MS.gene91122:intron | 25.0% |
| ! | GTTAGAGGAAAAATCTAATA+AGG | - | chr1.3:22115482-22115501 | None:intergenic | 25.0% |
| ! | TAGAGGAAAAATCTAATAAG+GGG | - | chr1.3:22115480-22115499 | None:intergenic | 25.0% |
| ! | TTATAAGAAAAACCTCATTG+TGG | - | chr1.3:22115753-22115772 | None:intergenic | 25.0% |
| ! | TTGTTAACAGAAGAGATATA+AGG | - | chr1.3:22112544-22112563 | None:intergenic | 25.0% |
| !! | TGAAAAGTTTTCGAATTCAA+AGG | + | chr1.3:22113042-22113061 | MS.gene91122:CDS | 25.0% |
| !!! | ATCACCAAATTAGTTTGTTT+AGG | - | chr1.3:22114189-22114208 | None:intergenic | 25.0% |
| !!! | ATGCATTGCACATTTTTTTT+TGG | + | chr1.3:22116291-22116310 | MS.gene91122:intron | 25.0% |
| !!! | CTCGAAAGAGTAATTTTAAT+TGG | + | chr1.3:22113837-22113856 | MS.gene91122:intron | 25.0% |
| !!! | GGTAATTTGTTCTCAAAAAA+AGG | - | chr1.3:22115459-22115478 | None:intergenic | 25.0% |
| !!! | TGATCTGATATGTTCTAAAA+AGG | - | chr1.3:22115324-22115343 | None:intergenic | 25.0% |
| AACTGCTGATACAAAATCAT+TGG | + | chr1.3:22115103-22115122 | MS.gene91122:CDS | 30.0% | |
| ACGTTATGTATGAAATTCTG+AGG | - | chr1.3:22115415-22115434 | None:intergenic | 30.0% | |
| ACTTCAATATTCCATCAAAG+TGG | + | chr1.3:22114581-22114600 | MS.gene91122:intron | 30.0% | |
| AGATGTTGTGTCTATTAACA+TGG | + | chr1.3:22114514-22114533 | MS.gene91122:CDS | 30.0% | |
| AGCAGAATTATCATAAAGCT+TGG | - | chr1.3:22114405-22114424 | None:intergenic | 30.0% | |
| ATACAATTTGTACACGTTTG+AGG | + | chr1.3:22112441-22112460 | MS.gene91122:CDS | 30.0% | |
| CAAAGTTAGGTATACCATAT+AGG | - | chr1.3:22114218-22114237 | None:intergenic | 30.0% | |
| CACAAAACTGAATACTTGAA+AGG | + | chr1.3:22116432-22116451 | MS.gene91122:CDS | 30.0% | |
| CTATATGGTATACCTAACTT+TGG | + | chr1.3:22114216-22114235 | MS.gene91122:intron | 30.0% | |
| CTCACCTAAACAAACTAATT+TGG | + | chr1.3:22114182-22114201 | MS.gene91122:intron | 30.0% | |
| CTTTGATGGAATATTGAAGT+CGG | - | chr1.3:22114581-22114600 | None:intergenic | 30.0% | |
| GCTTTATGATAATTCTGCTA+TGG | + | chr1.3:22114406-22114425 | MS.gene91122:CDS | 30.0% | |
| TGTAATCATAGGTATCATGT+TGG | + | chr1.3:22115896-22115915 | MS.gene91122:intron | 30.0% | |
| TTGAACTCTAAACAAAATGC+AGG | - | chr1.3:22116373-22116392 | None:intergenic | 30.0% | |
| ! | AATGATTTTGTATCAGCAGT+TGG | - | chr1.3:22115104-22115123 | None:intergenic | 30.0% |
| ! | ACAATAAGAAGCATGACATT+AGG | - | chr1.3:22116349-22116368 | None:intergenic | 30.0% |
| ! | ACTCTTTTCTTGCATGTTTA+TGG | - | chr1.3:22116150-22116169 | None:intergenic | 30.0% |
| ! | ATCTTTTCTTTGAACTGTCA+GGG | - | chr1.3:22115514-22115533 | None:intergenic | 30.0% |
| ! | ATGTTTGATTCTGAAGATGA+AGG | - | chr1.3:22112593-22112612 | None:intergenic | 30.0% |
| ! | ATTAACCTTTTCACAGAGAA+AGG | - | chr1.3:22115380-22115399 | None:intergenic | 30.0% |
| ! | CACATTTTATAGAGTAAGGA+AGG | + | chr1.3:22113566-22113585 | MS.gene91122:intron | 30.0% |
| ! | GAGATATAAGGATGATGTTT+TGG | - | chr1.3:22112532-22112551 | None:intergenic | 30.0% |
| ! | TATCTTTTCTTTGAACTGTC+AGG | - | chr1.3:22115515-22115534 | None:intergenic | 30.0% |
| ! | TATTAACATGGCCTTTTTGA+AGG | + | chr1.3:22114526-22114545 | MS.gene91122:CDS | 30.0% |
| ! | TGTATTCTGAGAAATGTTGT+AGG | + | chr1.3:22116197-22116216 | MS.gene91122:intron | 30.0% |
| ! | TTCGAATTCAAAGGTTTTTC+AGG | + | chr1.3:22113051-22113070 | MS.gene91122:CDS | 30.0% |
| !! | ACTCTAAAACTTTGATGTTG+CGG | + | chr1.3:22114720-22114739 | MS.gene91122:intron | 30.0% |
| !! | ATATAAGGATGATGTTTTGG+CGG | - | chr1.3:22112529-22112548 | None:intergenic | 30.0% |
| !! | TGAAGGTACTTTAAATGTTG+TGG | + | chr1.3:22113099-22113118 | MS.gene91122:intron | 30.0% |
| !! | TTCTGGTTTGTAGATATTGT+TGG | - | chr1.3:22112628-22112647 | None:intergenic | 30.0% |
| !! | TTGGTGATGATATACCTATA+TGG | + | chr1.3:22114201-22114220 | MS.gene91122:intron | 30.0% |
| !!! | AAGTGTGTTTGGTTTTACTT+TGG | + | chr1.3:22113903-22113922 | MS.gene91122:intron | 30.0% |
| !!! | CTTTGCACCTTATTGTTTTT+TGG | + | chr1.3:22116317-22116336 | MS.gene91122:intron | 30.0% |
| !!! | GTTTTTCAGGAATTGAATGT+TGG | + | chr1.3:22113064-22113083 | MS.gene91122:CDS | 30.0% |
| AAGGAAGGATTTATGGAAGA+GGG | + | chr1.3:22112885-22112904 | MS.gene91122:CDS | 35.0% | |
| ACCAAATAAACAGTCCTCTT+AGG | - | chr1.3:22112983-22113002 | None:intergenic | 35.0% | |
| AGCAATACTAATCCAGTTGT+TGG | + | chr1.3:22116043-22116062 | MS.gene91122:intron | 35.0% | |
| AGTATCTTGAAGCTATTAGG+AGG | + | chr1.3:22112936-22112955 | MS.gene91122:CDS | 35.0% | |
| AGTCAAGGTTGTATTCTACT+TGG | + | chr1.3:22116228-22116247 | MS.gene91122:intron | 35.0% | |
| ATAGGTGAGAATCCAATTGT+CGG | - | chr1.3:22115703-22115722 | None:intergenic | 35.0% | |
| ATCACTTCCATGTTCATCAA+AGG | - | chr1.3:22116496-22116515 | None:intergenic | 35.0% | |
| CATTTACAAATAAACAGGGC+TGG | + | chr1.3:22114289-22114308 | MS.gene91122:intron | 35.0% | |
| CCATGTACTTAGCATTTCAT+AGG | + | chr1.3:22113808-22113827 | MS.gene91122:intron | 35.0% | |
| CCTATGAAATGCTAAGTACA+TGG | - | chr1.3:22113811-22113830 | None:intergenic | 35.0% | |
| CTGATACAAAATCATTGGAG+AGG | + | chr1.3:22115108-22115127 | MS.gene91122:CDS | 35.0% | |
| GACATGTTTAACCACTTTGA+TGG | - | chr1.3:22114595-22114614 | None:intergenic | 35.0% | |
| GATGATGAAGGAAGGATTTA+TGG | + | chr1.3:22112878-22112897 | MS.gene91122:CDS | 35.0% | |
| GCAATATGTCTTTCACTGTA+AGG | + | chr1.3:22115162-22115181 | MS.gene91122:intron | 35.0% | |
| GTTAAAAAATGCTGTCGAAG+AGG | + | chr1.3:22115603-22115622 | MS.gene91122:CDS | 35.0% | |
| TAAGAGTCGCAATGTTAAGT+GGG | - | chr1.3:22116024-22116043 | None:intergenic | 35.0% | |
| TATGCATCCTTTGATGAACA+TGG | + | chr1.3:22116486-22116505 | MS.gene91122:CDS | 35.0% | |
| TCACAGGATATGAAATGTGT+TGG | + | chr1.3:22112908-22112927 | MS.gene91122:CDS | 35.0% | |
| TGATACGAATTCGATGGTTT+GGG | - | chr1.3:22112726-22112745 | None:intergenic | 35.0% | |
| TGCAGTATCTTGAAGCTATT+AGG | + | chr1.3:22112933-22112952 | MS.gene91122:CDS | 35.0% | |
| TGTCTGTGTTACAACTGATT+TGG | + | chr1.3:22113698-22113717 | MS.gene91122:intron | 35.0% | |
| TTCTCAGAATACAAAGTCTG+AGG | - | chr1.3:22116190-22116209 | None:intergenic | 35.0% | |
| TTGTAACACAGACAACCAAT+TGG | - | chr1.3:22113692-22113711 | None:intergenic | 35.0% | |
| TTTCACAGAGAAAGGAAAAG+AGG | - | chr1.3:22115372-22115391 | None:intergenic | 35.0% | |
| TTTCCATCGTCTTCTATTCA+TGG | - | chr1.3:22114806-22114825 | None:intergenic | 35.0% | |
| TTTGTGTAACAACGATGTTC+TGG | - | chr1.3:22116265-22116284 | None:intergenic | 35.0% | |
| ! | AACGTAGTGTGTGAGTTTTA+AGG | + | chr1.3:22113169-22113188 | MS.gene91122:intron | 35.0% |
| ! | CTTTTCCTTTCTCTGTGAAA+AGG | + | chr1.3:22115372-22115391 | MS.gene91122:intron | 35.0% |
| ! | GCATCGATAAGCATACAATT+AGG | - | chr1.3:22115787-22115806 | None:intergenic | 35.0% |
| ! | TGAATTAGCCTCTTTAGCTA+CGG | + | chr1.3:22116077-22116096 | MS.gene91122:intron | 35.0% |
| !! | AGAGTATTGAAAGCATCCAA+AGG | + | chr1.3:22114441-22114460 | MS.gene91122:CDS | 35.0% |
| !! | GTGTTACAACTGATTTGGAT+AGG | + | chr1.3:22113703-22113722 | MS.gene91122:intron | 35.0% |
| !! | TATACCTAACTTTGGAGCAT+TGG | + | chr1.3:22114224-22114243 | MS.gene91122:intron | 35.0% |
| !!! | GCAACATCAAAGTTTTAGAG+TGG | - | chr1.3:22114721-22114740 | None:intergenic | 35.0% |
| !!! | TATTTTTTTGCTGTGCACCA+GGG | + | chr1.3:22115020-22115039 | MS.gene91122:intron | 35.0% |
| !!! | TCTAGCTTTTAGGGATTTGA+AGG | + | chr1.3:22113727-22113746 | MS.gene91122:intron | 35.0% |
| !!! | TGGATAGGTTCTAGCTTTTA+GGG | + | chr1.3:22113718-22113737 | MS.gene91122:intron | 35.0% |
| !!! | TTATTTTTTTGCTGTGCACC+AGG | + | chr1.3:22115019-22115038 | MS.gene91122:intron | 35.0% |
| !!! | TTGGATAGGTTCTAGCTTTT+AGG | + | chr1.3:22113717-22113736 | MS.gene91122:intron | 35.0% |
| !!! | TTTTGCTGTTTATCATCACC+TGG | - | chr1.3:22112476-22112495 | None:intergenic | 35.0% |
| !!! | TTTTTTAACAATGCCCACCA+TGG | - | chr1.3:22115592-22115611 | None:intergenic | 35.0% |
| AAACTGACAGTTCCAATCCA+TGG | + | chr1.3:22115572-22115591 | MS.gene91122:CDS | 40.0% | |
| AAAGACATATTGCGCGAAGT+AGG | - | chr1.3:22115155-22115174 | None:intergenic | 40.0% | |
| AAATGCGTGCTAAGTGTGTT+TGG | + | chr1.3:22113892-22113911 | MS.gene91122:intron | 40.0% | |
| AAGCAGAATATGCCAACAAC+TGG | - | chr1.3:22116058-22116077 | None:intergenic | 40.0% | |
| AATCTTGGATTGCCGACAAT+TGG | + | chr1.3:22115688-22115707 | MS.gene91122:CDS | 40.0% | |
| AATCTTTCCCTGATGACATG+AGG | + | chr1.3:22113225-22113244 | MS.gene91122:intron | 40.0% | |
| ACACAATACTCTCCGCTAAT+AGG | + | chr1.3:22115235-22115254 | MS.gene91122:intron | 40.0% | |
| AGCCACTAATCCTTCTCAAA+TGG | + | chr1.3:22112750-22112769 | MS.gene91122:CDS | 40.0% | |
| AGTCCATGAATAGAAGACGA+TGG | + | chr1.3:22114800-22114819 | MS.gene91122:intron | 40.0% | |
| AGTGTGAGAGTAGAGCATAA+TGG | - | chr1.3:22112801-22112820 | None:intergenic | 40.0% | |
| ATGAACATGGAAGTGATGCA+AGG | + | chr1.3:22116499-22116518 | MS.gene91122:CDS | 40.0% | |
| ATTGTGGTCATGGAGTAGAA+TGG | - | chr1.3:22115737-22115756 | None:intergenic | 40.0% | |
| CAAACCATCGAATTCGTATC+AGG | + | chr1.3:22112725-22112744 | MS.gene91122:CDS | 40.0% | |
| CAAATAAGCCGTAGCTAAAG+AGG | - | chr1.3:22116088-22116107 | None:intergenic | 40.0% | |
| CATAGGTATCATGTTGGTGT+CGG | + | chr1.3:22115902-22115921 | MS.gene91122:intron | 40.0% | |
| CATCAGGGAAAGATTTCCTT+TGG | - | chr1.3:22113220-22113239 | None:intergenic | 40.0% | |
| CATTGTCTGTCTATGAAGCA+CGG | + | chr1.3:22115816-22115835 | MS.gene91122:intron | 40.0% | |
| CTAAGAGTCGCAATGTTAAG+TGG | - | chr1.3:22116025-22116044 | None:intergenic | 40.0% | |
| CTAATCCTTCTCAAATGGAC+AGG | + | chr1.3:22112755-22112774 | MS.gene91122:CDS | 40.0% | |
| CTGATACGAATTCGATGGTT+TGG | - | chr1.3:22112727-22112746 | None:intergenic | 40.0% | |
| CTTGATCAAGTCGAATTGTG+AGG | - | chr1.3:22114474-22114493 | None:intergenic | 40.0% | |
| CTTTCCTGATACGAATTCGA+TGG | - | chr1.3:22112732-22112751 | None:intergenic | 40.0% | |
| GAAAAACCTCATTGTGGTCA+TGG | - | chr1.3:22115747-22115766 | None:intergenic | 40.0% | |
| GAAGCTATTAGGAGGCTTAA+GGG | + | chr1.3:22112944-22112963 | MS.gene91122:CDS | 40.0% | |
| GAAGGAAGGATTTATGGAAG+AGG | + | chr1.3:22112884-22112903 | MS.gene91122:CDS | 40.0% | |
| GACAATTGGATTCTCACCTA+TGG | + | chr1.3:22115702-22115721 | MS.gene91122:CDS | 40.0% | |
| GCAAATTCATGACAAAACCC+TGG | - | chr1.3:22115040-22115059 | None:intergenic | 40.0% | |
| GCCTAAGAGGACTGTTTATT+TGG | + | chr1.3:22112979-22112998 | MS.gene91122:CDS | 40.0% | |
| GCGTGTTTGGATGATGTAAT+CGG | + | chr1.3:22113247-22113266 | MS.gene91122:intron | 40.0% | |
| GGTTGTATTCTACTTGGAGA+AGG | + | chr1.3:22116234-22116253 | MS.gene91122:intron | 40.0% | |
| GTCCATTTGAGAAGGATTAG+TGG | - | chr1.3:22112755-22112774 | None:intergenic | 40.0% | |
| GTGCAGACAACTATGAAGTA+CGG | - | chr1.3:22115964-22115983 | None:intergenic | 40.0% | |
| TATTAGGAGGCTTAAGGGAT+GGG | + | chr1.3:22112949-22112968 | MS.gene91122:CDS | 40.0% | |
| TCACTTTGTCTACACACCAA+AGG | + | chr1.3:22113201-22113220 | MS.gene91122:intron | 40.0% | |
| TGAAGCTATTAGGAGGCTTA+AGG | + | chr1.3:22112943-22112962 | MS.gene91122:CDS | 40.0% | |
| TTAGCTACGGCTTATTTGTC+AGG | + | chr1.3:22116090-22116109 | MS.gene91122:intron | 40.0% | |
| TTCATAGTTGTCTGCACTGT+AGG | + | chr1.3:22115967-22115986 | MS.gene91122:intron | 40.0% | |
| TTGTAGGTTTGTCTGAGTCA+AGG | + | chr1.3:22116213-22116232 | MS.gene91122:intron | 40.0% | |
| TTGTGGTCATGGAGTAGAAT+GGG | - | chr1.3:22115736-22115755 | None:intergenic | 40.0% | |
| TTGTTCCTGTCCATTTGAGA+AGG | - | chr1.3:22112763-22112782 | None:intergenic | 40.0% | |
| ! | CTCACAATTCGACTTGATCA+AGG | + | chr1.3:22114472-22114491 | MS.gene91122:CDS | 40.0% |
| ! | GATTTTGTATCAGCAGTTGG+TGG | - | chr1.3:22115101-22115120 | None:intergenic | 40.0% |
| ! | GGCTTGTGTTATTAGGAAAC+TGG | - | chr1.3:22112684-22112703 | None:intergenic | 40.0% |
| ! | TGAGAGTAGAGCATAATGGA+TGG | - | chr1.3:22112797-22112816 | None:intergenic | 40.0% |
| !! | AGTAGAGCATAATGGATGGA+AGG | - | chr1.3:22112793-22112812 | None:intergenic | 40.0% |
| !! | GAAATGAAGTGTCGTTTCGA+AGG | - | chr1.3:22114921-22114940 | None:intergenic | 40.0% |
| !! | TGGATTGGAACTGTCAGTTT+TGG | - | chr1.3:22115572-22115591 | None:intergenic | 40.0% |
| !!! | TTTGGTTTTTGCTCCTGATG+AGG | + | chr1.3:22112997-22113016 | MS.gene91122:CDS | 40.0% |
| AAAAATGCTGTCGAAGAGGC+TGG | + | chr1.3:22115607-22115626 | MS.gene91122:CDS | 45.0% | |
| AAACACGCCTCATGTCATCA+GGG | - | chr1.3:22113235-22113254 | None:intergenic | 45.0% | |
| AATCCAGCTTCAGCTTCAGA+TGG | - | chr1.3:22115065-22115084 | None:intergenic | 45.0% | |
| AATGCCCTGTAATGCTCATC+CGG | - | chr1.3:22114320-22114339 | None:intergenic | 45.0% | |
| AATGTGACACTCGTCAACGA+AGG | + | chr1.3:22113638-22113657 | MS.gene91122:intron | 45.0% | |
| ACGAAGCAGACACCTATTAG+CGG | - | chr1.3:22115250-22115269 | None:intergenic | 45.0% | |
| ATATCTGTGCATGATGCGTC+CGG | + | chr1.3:22115532-22115551 | MS.gene91122:CDS | 45.0% | |
| ATTAGGAGGCTTAAGGGATG+GGG | + | chr1.3:22112950-22112969 | MS.gene91122:CDS | 45.0% | |
| CAAGCCAATGCTCCAAAGTT+AGG | - | chr1.3:22114231-22114250 | None:intergenic | 45.0% | |
| CCTTCCTTCATCATCCACAT+GGG | - | chr1.3:22112873-22112892 | None:intergenic | 45.0% | |
| CGAAGGTAAGCATAGACTGT+TGG | - | chr1.3:22114904-22114923 | None:intergenic | 45.0% | |
| CTAACACCACCAGTAGAAGA+TGG | + | chr1.3:22112496-22112515 | MS.gene91122:intron | 45.0% | |
| CTATTAGGAGGCTTAAGGGA+TGG | + | chr1.3:22112948-22112967 | MS.gene91122:CDS | 45.0% | |
| CTGGTAGACTGAGTGTAGTT+TGG | - | chr1.3:22112665-22112684 | None:intergenic | 45.0% | |
| GAATTGCGTTGCAGATGATC+AGG | + | chr1.3:22114692-22114711 | MS.gene91122:intron | 45.0% | |
| GATTTATGGAAGAGGGTCAC+AGG | + | chr1.3:22112892-22112911 | MS.gene91122:CDS | 45.0% | |
| GGTTGAACACCATCTTCTAC+TGG | - | chr1.3:22112508-22112527 | None:intergenic | 45.0% | |
| GTTGGTGTAGTGCTTGATGA+AGG | + | chr1.3:22113082-22113101 | MS.gene91122:CDS | 45.0% | |
| TAACAATGCCCACCATGGAT+TGG | - | chr1.3:22115587-22115606 | None:intergenic | 45.0% | |
| TAATTGGCTGCATAGTGCTG+TGG | + | chr1.3:22113853-22113872 | MS.gene91122:intron | 45.0% | |
| TATGAAGTACGGACACTCCT+CGG | - | chr1.3:22115953-22115972 | None:intergenic | 45.0% | |
| TCAAGTCGAATTGTGAGGTG+CGG | - | chr1.3:22114469-22114488 | None:intergenic | 45.0% | |
| TCAGGGCTAAAAGCTGTTAG+AGG | - | chr1.3:22115497-22115516 | None:intergenic | 45.0% | |
| TCATCCACATGGGCTTCAAA+CGG | - | chr1.3:22112863-22112882 | None:intergenic | 45.0% | |
| TCCTTCCTTCATCATCCACA+TGG | - | chr1.3:22112874-22112893 | None:intergenic | 45.0% | |
| TCTACTCCATGACCACAATG+AGG | + | chr1.3:22115738-22115757 | MS.gene91122:CDS | 45.0% | |
| TGAACACCATCTTCTACTGG+TGG | - | chr1.3:22112505-22112524 | None:intergenic | 45.0% | |
| TGACAGTTCCAATCCATGGT+GGG | + | chr1.3:22115576-22115595 | MS.gene91122:CDS | 45.0% | |
| TGGAGTTCCAGCCTTCAAAA+AGG | - | chr1.3:22114540-22114559 | None:intergenic | 45.0% | |
| TTCTCCGGATGAGCATTACA+GGG | + | chr1.3:22114313-22114332 | MS.gene91122:CDS | 45.0% | |
| TTGTCGGCAATCCAAGATTG+CGG | - | chr1.3:22115687-22115706 | None:intergenic | 45.0% | |
| TTTGCTCCTGATGAGGAGAT+TGG | + | chr1.3:22113004-22113023 | MS.gene91122:CDS | 45.0% | |
| ! | ATTTTTCCTGCCTCCACAGA+TGG | + | chr1.3:22115652-22115671 | MS.gene91122:CDS | 45.0% |
| ! | CAATTCGACTTGATCAAGGC+CGG | + | chr1.3:22114476-22114495 | MS.gene91122:CDS | 45.0% |
| ! | CGAATTCGATGGTTTGGGAT+TGG | - | chr1.3:22112721-22112740 | None:intergenic | 45.0% |
| ! | GAAGTCGGTTGACTTACTGT+TGG | - | chr1.3:22114566-22114585 | None:intergenic | 45.0% |
| ! | GACTGAGTGTAGTTTGGAGT+TGG | - | chr1.3:22112659-22112678 | None:intergenic | 45.0% |
| ! | GAGCATTACAGGGCATTCTA+TGG | + | chr1.3:22114323-22114342 | MS.gene91122:CDS | 45.0% |
| ! | GAGTGTAGTTTGGAGTTGGA+TGG | - | chr1.3:22112655-22112674 | None:intergenic | 45.0% |
| ! | GGTTGACTTACTGTTGGTGA+TGG | - | chr1.3:22114560-22114579 | None:intergenic | 45.0% |
| !! | AACATGGCCTTTTTGAAGGC+TGG | + | chr1.3:22114530-22114549 | MS.gene91122:CDS | 45.0% |
| !! | AGAATGGGAGTGTTTGCCAT+AGG | - | chr1.3:22115721-22115740 | None:intergenic | 45.0% |
| !! | AGCATAATGGATGGAAGGTC+TGG | - | chr1.3:22112788-22112807 | None:intergenic | 45.0% |
| !! | CTGTCAGTTTTGGTGAAGAC+TGG | - | chr1.3:22115562-22115581 | None:intergenic | 45.0% |
| !! | GGGAGTTGGCTTGTGTTATT+AGG | - | chr1.3:22112691-22112710 | None:intergenic | 45.0% |
| !! | TATCATGTTGGTGTCGGTGT+CGG | + | chr1.3:22115908-22115927 | MS.gene91122:intron | 45.0% |
| !! | TTTGGTGAAGACTGGTTTCC+CGG | - | chr1.3:22115554-22115573 | None:intergenic | 45.0% |
| !!! | TTTGAAATTTTTAAAAAATT+GGG | + | chr1.3:22113498-22113517 | MS.gene91122:intron | 5.0% |
| AGAGGCGAATTGCTGAAGAG+TGG | + | chr1.3:22115126-22115145 | MS.gene91122:CDS | 50.0% | |
| ATCTCCGTCAGCTTTCAAGC+CGG | - | chr1.3:22114498-22114517 | None:intergenic | 50.0% | |
| ATGATCCCACTTGTCGTGCT+CGG | - | chr1.3:22112837-22112856 | None:intergenic | 50.0% | |
| ATTGTGAGGTGCGGTACCTT+TGG | - | chr1.3:22114460-22114479 | None:intergenic | 50.0% | |
| CAAACACGCCTCATGTCATC+AGG | - | chr1.3:22113236-22113255 | None:intergenic | 50.0% | |
| CCCATGTGGATGATGAAGGA+AGG | + | chr1.3:22112870-22112889 | MS.gene91122:CDS | 50.0% | |
| CTCCTGATGAGGAGATTGGT+GGG | + | chr1.3:22113008-22113027 | MS.gene91122:CDS | 50.0% | |
| CTGACAGTTCCAATCCATGG+TGG | + | chr1.3:22115575-22115594 | MS.gene91122:CDS | 50.0% | |
| CTGATGACATGAGGCGTGTT+TGG | + | chr1.3:22113234-22113253 | MS.gene91122:intron | 50.0% | |
| CTTCTCCGGATGAGCATTAC+AGG | + | chr1.3:22114312-22114331 | MS.gene91122:CDS | 50.0% | |
| GAAGCCCATGTGGATGATGA+AGG | + | chr1.3:22112866-22112885 | MS.gene91122:CDS | 50.0% | |
| GAGGCGAATTGCTGAAGAGT+GGG | + | chr1.3:22115127-22115146 | MS.gene91122:CDS | 50.0% | |
| GAGTCGCAATGTTAAGTGGG+AGG | - | chr1.3:22116021-22116040 | None:intergenic | 50.0% | |
| GATGGGGATTTCAGCCTAAG+AGG | + | chr1.3:22112966-22112985 | MS.gene91122:CDS | 50.0% | |
| GTGGAGGCAGGAAAAATCTC+TGG | - | chr1.3:22115649-22115668 | None:intergenic | 50.0% | |
| GTTCTCCACAACCATGACTG+CGG | - | chr1.3:22114746-22114765 | None:intergenic | 50.0% | |
| TAAAGCTTGGACCCATGTCC+TGG | - | chr1.3:22114392-22114411 | None:intergenic | 50.0% | |
| TATCTGTGCATGATGCGTCC+GGG | + | chr1.3:22115533-22115552 | MS.gene91122:CDS | 50.0% | |
| TGGAGTTGGATGGTCTGTTC+TGG | - | chr1.3:22112645-22112664 | None:intergenic | 50.0% | |
| TGTCTATGAAGCACGGACAC+CGG | + | chr1.3:22115823-22115842 | MS.gene91122:intron | 50.0% | |
| ! | ACAGGGCATTCTATGGAGAG+AGG | + | chr1.3:22114330-22114349 | MS.gene91122:CDS | 50.0% |
| ! | CGTTTGAGGTTGTCAAAGCC+AGG | + | chr1.3:22112455-22112474 | MS.gene91122:CDS | 50.0% |
| ! | GGTTTGGGATTGGAGTGAGA+GGG | - | chr1.3:22112711-22112730 | None:intergenic | 50.0% |
| ! | TCATCCGTTTGAAGCCCATG+TGG | + | chr1.3:22112856-22112875 | MS.gene91122:CDS | 50.0% |
| ! | TGGTTTGGGATTGGAGTGAG+AGG | - | chr1.3:22112712-22112731 | None:intergenic | 50.0% |
| !! | ATAAACAGGGCTGGCTTCTC+CGG | + | chr1.3:22114298-22114317 | MS.gene91122:intron | 50.0% |
| !! | GAAAAAGCGTCCATCTGTGG+AGG | - | chr1.3:22115665-22115684 | None:intergenic | 50.0% |
| !!! | GGACGCTTTTTCCGCAATCT+TGG | + | chr1.3:22115673-22115692 | MS.gene91122:CDS | 50.0% |
| AATGCTGTCGAAGAGGCTGG+TGG | + | chr1.3:22115610-22115629 | MS.gene91122:CDS | 55.0% | |
| ATGCTGTCGAAGAGGCTGGT+GGG | + | chr1.3:22115611-22115630 | MS.gene91122:CDS | 55.0% | |
| CTTTGATCACCAGCCACCAC+GGG | - | chr1.3:22114358-22114377 | None:intergenic | 55.0% | |
| GCTCCTGATGAGGAGATTGG+TGG | + | chr1.3:22113007-22113026 | MS.gene91122:CDS | 55.0% | |
| GCTGGTGATCAAAGCCGTTG+GGG | + | chr1.3:22114364-22114383 | MS.gene91122:CDS | 55.0% | |
| GCTTTGATCACCAGCCACCA+CGG | - | chr1.3:22114359-22114378 | None:intergenic | 55.0% | |
| GGATTGGAGTGAGAGGGAGT+TGG | - | chr1.3:22112705-22112724 | None:intergenic | 55.0% | |
| GGCTGGTGATCAAAGCCGTT+GGG | + | chr1.3:22114363-22114382 | MS.gene91122:CDS | 55.0% | |
| GTACGGACACTCCTCGGATT+AGG | - | chr1.3:22115947-22115966 | None:intergenic | 55.0% | |
| TGCCCACCAATCTCCTCATC+AGG | - | chr1.3:22113013-22113032 | None:intergenic | 55.0% | |
| TGGCTGGTGATCAAAGCCGT+TGG | + | chr1.3:22114362-22114381 | MS.gene91122:CDS | 55.0% | |
| ! | CAGCCATCTGAAGCTGAAGC+TGG | + | chr1.3:22115059-22115078 | MS.gene91122:CDS | 55.0% |
| ! | GAGGAGATTGGTGGGCATGA+TGG | + | chr1.3:22113016-22113035 | MS.gene91122:CDS | 55.0% |
| !! | AAGGCCGGCTTGAAAGCTGA+CGG | + | chr1.3:22114491-22114510 | MS.gene91122:CDS | 55.0% |
| !! | GCGGAAAAAGCGTCCATCTG+TGG | - | chr1.3:22115668-22115687 | None:intergenic | 55.0% |
| AAGCGTCCATCTGTGGAGGC+AGG | - | chr1.3:22115661-22115680 | None:intergenic | 60.0% | |
| ATCAAAGCCGTTGGGGCTCC+AGG | + | chr1.3:22114371-22114390 | MS.gene91122:CDS | 60.0% | |
| ATCCCACTTGTCGTGCTCGG+CGG | - | chr1.3:22112834-22112853 | None:intergenic | 60.0% | |
| TCTATGGAGAGAGGAGCCCG+TGG | + | chr1.3:22114339-22114358 | MS.gene91122:CDS | 60.0% | |
| TGATGTTGCGGCCGCAGTCA+TGG | + | chr1.3:22114732-22114751 | MS.gene91122:intron | 60.0% | |
| ! | GTTGGTGTCCGTGTCGTGTC+CGG | - | chr1.3:22115845-22115864 | None:intergenic | 60.0% |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr1.3:22115937-22115956 | None:intergenic | 60.0% |
| !! | TTGGTGTCGGTGTCGGACAC+CGG | + | chr1.3:22115915-22115934 | MS.gene91122:intron | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | + | chr1.3:22115933-22115952 | MS.gene91122:intron | 65.0% | |
| ATGGAGAGAGGAGCCCGTGG+TGG | + | chr1.3:22114342-22114361 | MS.gene91122:CDS | 65.0% | |
| CACGGACACCGGACACGACA+CGG | + | chr1.3:22115834-22115853 | MS.gene91122:intron | 65.0% | |
| CCCATGTCCTGGAGCCCCAA+CGG | - | chr1.3:22114381-22114400 | None:intergenic | 65.0% | |
| CCGTTGGGGCTCCAGGACAT+GGG | + | chr1.3:22114378-22114397 | MS.gene91122:CDS | 65.0% | |
| TCCCACTTGTCGTGCTCGGC+GGG | - | chr1.3:22112833-22112852 | None:intergenic | 65.0% | |
| TGCGGCCGCAGTCATGGTTG+TGG | + | chr1.3:22114738-22114757 | MS.gene91122:intron | 65.0% | |
| !! | TGGTGTCGGTGTCGGACACC+GGG | + | chr1.3:22115916-22115935 | MS.gene91122:intron | 65.0% |
| AGAGAGGAGCCCGTGGTGGC+TGG | + | chr1.3:22114346-22114365 | MS.gene91122:CDS | 70.0% | |
| CCCACTTGTCGTGCTCGGCG+GGG | - | chr1.3:22112832-22112851 | None:intergenic | 70.0% | |
| CCCCGCCGAGCACGACAAGT+GGG | + | chr1.3:22112829-22112848 | MS.gene91122:CDS | 70.0% | |
| GCCGTTGGGGCTCCAGGACA+TGG | + | chr1.3:22114377-22114396 | MS.gene91122:CDS | 70.0% | |
| TCCCCGCCGAGCACGACAAG+TGG | + | chr1.3:22112828-22112847 | MS.gene91122:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 22112403 | 22116539 | 22112403 | ID=MS.gene91122 |
| chr1.3 | mRNA | 22112403 | 22116539 | 22112403 | ID=MS.gene91122.t1;Parent=MS.gene91122 |
| chr1.3 | exon | 22112403 | 22112476 | 22112403 | ID=MS.gene91122.t1.exon1;Parent=MS.gene91122.t1 |
| chr1.3 | CDS | 22112403 | 22112476 | 22112403 | ID=cds.MS.gene91122.t1;Parent=MS.gene91122.t1 |
| chr1.3 | exon | 22112646 | 22113103 | 22112646 | ID=MS.gene91122.t1.exon2;Parent=MS.gene91122.t1 |
| chr1.3 | CDS | 22112646 | 22113103 | 22112646 | ID=cds.MS.gene91122.t1;Parent=MS.gene91122.t1 |
| chr1.3 | exon | 22114306 | 22114568 | 22114306 | ID=MS.gene91122.t1.exon3;Parent=MS.gene91122.t1 |
| chr1.3 | CDS | 22114306 | 22114568 | 22114306 | ID=cds.MS.gene91122.t1;Parent=MS.gene91122.t1 |
| chr1.3 | exon | 22115041 | 22115178 | 22115041 | ID=MS.gene91122.t1.exon4;Parent=MS.gene91122.t1 |
| chr1.3 | CDS | 22115041 | 22115178 | 22115041 | ID=cds.MS.gene91122.t1;Parent=MS.gene91122.t1 |
| chr1.3 | exon | 22115520 | 22115759 | 22115520 | ID=MS.gene91122.t1.exon5;Parent=MS.gene91122.t1 |
| chr1.3 | CDS | 22115520 | 22115759 | 22115520 | ID=cds.MS.gene91122.t1;Parent=MS.gene91122.t1 |
| chr1.3 | exon | 22116426 | 22116539 | 22116426 | ID=MS.gene91122.t1.exon6;Parent=MS.gene91122.t1 |
| chr1.3 | CDS | 22116426 | 22116539 | 22116426 | ID=cds.MS.gene91122.t1;Parent=MS.gene91122.t1 |
| Gene Sequence |
| Protein sequence |
