AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91383

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91383.t1 MTR_1g105605 98.257 746 8 1 1 741 1 746 0.0 1516
MS.gene91383.t1 MTR_3g084740 44.503 764 391 13 7 740 10 770 0.0 652
MS.gene91383.t1 MTR_8g011270 43.191 771 395 11 2 740 4 763 0.0 637
MS.gene91383.t1 MTR_3g084740 42.815 682 359 12 7 660 10 688 0.0 556
MS.gene91383.t1 MTR_6g452530 52.414 145 58 2 522 656 11 154 1.18e-42 152
MS.gene91383.t1 MTR_6g452520 52.414 145 58 2 522 656 11 154 1.51e-42 153
MS.gene91383.t1 MTR_6g452510 52.414 145 58 2 522 656 11 154 1.51e-42 153
MS.gene91383.t1 MTR_3g083830 41.350 237 63 8 225 459 32 194 2.57e-36 136
MS.gene91383.t1 MTR_7g110640 22.128 705 447 23 34 706 164 798 1.22e-20 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91383.t1 AT5G43670 61.104 797 251 8 1 741 1 794 0.0 1004
MS.gene91383.t1 AT3G23660 44.868 760 392 11 5 740 8 764 0.0 666
MS.gene91383.t1 AT3G23660 43.639 786 390 13 5 740 8 790 0.0 654
MS.gene91383.t1 AT1G05520 42.455 782 405 11 1 740 4 782 0.0 635
MS.gene91383.t1 AT4G14160 43.963 762 399 11 4 740 13 771 0.0 631
MS.gene91383.t1 AT4G14160 43.775 763 400 11 4 740 13 772 0.0 630
MS.gene91383.t1 AT2G21630 43.061 771 395 10 2 740 3 761 0.0 599
MS.gene91383.t1 AT4G14160 40.271 591 327 10 4 571 13 600 4.53e-141 428
MS.gene91383.t1 AT4G01810 22.254 692 438 18 51 706 200 827 8.99e-24 107
MS.gene91383.t1 AT4G01810 22.254 692 438 18 51 706 200 827 8.99e-24 107
MS.gene91383.t1 AT4G01810 22.254 692 438 18 51 706 200 827 8.99e-24 107

Find 192 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCCCAGCTCTGCATTTA+TGG 0.146142 1.3:-72080220 MS.gene91383:CDS
TCCTTAGGTGGAACATAAAT+TGG 0.153708 1.3:+72079905 None:intergenic
TTCCTTGTGGTGATCCATTA+TGG 0.166108 1.3:-72079679 MS.gene91383:CDS
ACTAATGATGTCAAAATTTC+TGG 0.170175 1.3:-72080396 MS.gene91383:CDS
CATTTGAATCCGATCAATTT+AGG 0.188915 1.3:-72080503 MS.gene91383:CDS
CTAAACTCACATTCTGAAAT+TGG 0.225580 1.3:+72080933 None:intergenic
CTGATGAAACTGCGTATTTC+CGG 0.234643 1.3:-72079849 MS.gene91383:CDS
TGTTCCAAAACAGGGATTTC+TGG 0.241058 1.3:-72080958 MS.gene91383:CDS
AGAATCATGGTATTCACTTC+TGG 0.244413 1.3:-72080777 MS.gene91383:CDS
TCCTTGTGGTGATCCATTAT+GGG 0.259198 1.3:-72079678 MS.gene91383:CDS
GGAACCAGAAATCCCTGTTT+TGG 0.272568 1.3:+72080954 None:intergenic
CTTCTTCCACTGAGCAATCT+TGG 0.278201 1.3:+72079654 None:intergenic
TTCTAAAATTCTCATGGTTT+GGG 0.281291 1.3:+72079614 None:intergenic
GGAACATAAATTGGGGATAA+AGG 0.283463 1.3:+72079914 None:intergenic
GTGTAGGTTGAATCATTATA+AGG 0.283660 1.3:+72079794 None:intergenic
TCGATTATCAATCACGTATC+TGG 0.284665 1.3:-72082066 MS.gene91383:CDS
CATAATGGATTTCGTTGAAT+TGG 0.291830 1.3:-72082272 None:intergenic
TGTTAGAGACATCAATAAAT+TGG 0.296694 1.3:+72079878 None:intergenic
TTTCTAAAATTCTCATGGTT+TGG 0.298952 1.3:+72079613 None:intergenic
TCTAGATCAATTGCAGATAC+TGG 0.318050 1.3:-72079392 MS.gene91383:CDS
GTCAAAATTTCTGGAGCTCT+TGG 0.335108 1.3:-72080387 MS.gene91383:CDS
AGGGATTGTTAGGTCTGATT+TGG 0.339917 1.3:+72082201 None:intergenic
CTAAATCTTGCAGTTTCTAT+AGG 0.340834 1.3:-72080656 MS.gene91383:CDS
CGGAAGGAAGAAGGATCTTC+TGG 0.343028 1.3:+72079955 None:intergenic
AGGTCTGATTTGGTTGTTGA+TGG 0.354224 1.3:+72082211 None:intergenic
AACTGTTCTGCATCCAGTTC+TGG 0.361114 1.3:+72079577 None:intergenic
GAGCAATCTTGGACCCATAA+TGG 0.371953 1.3:+72079665 None:intergenic
CACATAGTCCCCAAACTTAG+AGG 0.376203 1.3:+72079978 None:intergenic
AACACAGCCTGTTCCAAAAC+AGG 0.376787 1.3:-72080967 MS.gene91383:CDS
TGGTTCGGATATCATCTTTA+CGG 0.381108 1.3:-72079437 MS.gene91383:CDS
TGATGGTTAGAGGGATTGTT+AGG 0.382749 1.3:+72082191 None:intergenic
GTGGCCCATCAAACGAATAT+TGG 0.386146 1.3:+72079767 None:intergenic
GTACCTGATCGGAAGAAAAT+TGG 0.386477 1.3:+72081723 None:intergenic
GTTGAATTGGAGGCAGTAGA+AGG 0.388619 1.3:-72082259 MS.gene91383:CDS
CCTTAGGTGGAACATAAATT+GGG 0.391307 1.3:+72079906 None:intergenic
ACTTCTGGGCCTGCTACTCT+TGG 0.397015 1.3:-72080762 MS.gene91383:CDS
TTTGATTACGTTTGATTCCA+TGG 0.403247 1.3:-72081807 MS.gene91383:CDS
GAATCATGGTATTCACTTCT+GGG 0.404127 1.3:-72080776 MS.gene91383:CDS
AAAGCAACAAGAGCAGTATC+AGG 0.409675 1.3:+72081827 None:intergenic
CGGAAATACGCAGTTTCATC+AGG 0.417657 1.3:+72079850 None:intergenic
TTCATTCTACGTATAACTTC+AGG 0.419580 1.3:-72080887 MS.gene91383:CDS
CTGAACCATAAATGCAGAGC+TGG 0.420001 1.3:+72080215 None:intergenic
GAACATAAATTGGGGATAAA+GGG 0.420979 1.3:+72079915 None:intergenic
TTGCAGCTCCAGTGGACCTC+GGG 0.424808 1.3:+72080850 None:intergenic
AGAACAGTTGGTGGCTGAAC+GGG 0.425965 1.3:-72079563 MS.gene91383:CDS
CAATAAATTGGGATCTCCTT+AGG 0.428237 1.3:+72079890 None:intergenic
GCTGTTGGAAGCTCCAGAAC+TGG 0.430961 1.3:-72079590 MS.gene91383:CDS
TGAGCGCTCGGGTGGATTTG+TGG 0.435162 1.3:-72080538 MS.gene91383:CDS
CAAGATAGAATCGGGGCAAA+TGG 0.435352 1.3:+72079717 None:intergenic
ATTAGTAGTCACTATTTCAA+TGG 0.435439 1.3:+72080413 None:intergenic
GGTGTGGACGGCTAATGTTT+AGG 0.443719 1.3:+72081006 None:intergenic
TCCGTTGGTCATGGAATTCA+TGG 0.445862 1.3:-72082234 MS.gene91383:CDS
AAATCCACCCGAGCGCTCAA+TGG 0.446015 1.3:+72080542 None:intergenic
ATGCCCGTGATGTTGTTAGA+TGG 0.450547 1.3:-72080026 MS.gene91383:CDS
AGAAGCAGCAGCTTCGGTTA+TGG 0.452065 1.3:-72080082 MS.gene91383:CDS
AGGGTTACGTTGAGAACAAA+AGG 0.452981 1.3:+72082036 None:intergenic
CGTAACAGATGGATTCAACT+TGG 0.453726 1.3:+72079480 None:intergenic
ATCAAAGAGCAAGATAGAAT+CGG 0.454307 1.3:+72079708 None:intergenic
TTGATCGGATTCAAATGATT+CGG 0.454750 1.3:+72080509 None:intergenic
GTTAGAGACATCAATAAATT+GGG 0.455707 1.3:+72079879 None:intergenic
CGTCCACACCAGCTGCATAC+TGG 0.456155 1.3:-72080993 MS.gene91383:CDS
TGATCAAGAAGCAGCAGCTT+CGG 0.456711 1.3:-72080088 MS.gene91383:CDS
ACGGTACAGGCAGGGGAACA+TGG 0.459727 1.3:-72080184 MS.gene91383:CDS
GCTGCAATTTCAGCTGCCAT+TGG 0.460310 1.3:-72080834 MS.gene91383:CDS
CATTCCACAGATATTGCTGC+TGG 0.461956 1.3:-72080114 MS.gene91383:CDS
TGGTCACATCTTATAACCTT+TGG 0.463433 1.3:+72079532 None:intergenic
TATACATTTCCTAAATTGAT+CGG 0.463943 1.3:+72080494 None:intergenic
CCCCAAACTTAGAGGTAAAA+CGG 0.465443 1.3:+72079986 None:intergenic
TCAAAGAGCAAGATAGAATC+GGG 0.465693 1.3:+72079709 None:intergenic
TGTAGGTTGAATCATTATAA+GGG 0.466734 1.3:+72079795 None:intergenic
GTTTATAACACGGTACAGGC+AGG 0.471778 1.3:-72080193 MS.gene91383:CDS
ACACGTCTCTGCTCGGAGAA+TGG 0.475673 1.3:+72080050 None:intergenic
AATGTCATTGTGGGTTCTCA+TGG 0.475832 1.3:+72080704 None:intergenic
TTCAACATACACAGATGGTT+CGG 0.479217 1.3:-72079452 MS.gene91383:CDS
AATCCACCCGAGCGCTCAAT+GGG 0.481475 1.3:+72080543 None:intergenic
CCCATTGAAAATGTCATTGT+GGG 0.482404 1.3:+72080695 None:intergenic
CCCAATTTATGTTCCACCTA+AGG 0.483319 1.3:-72079906 MS.gene91383:CDS
TGATAATCGAGACGAGCGTA+AGG 0.486726 1.3:+72082079 None:intergenic
TCGAGAACCCATTGAGCGCT+CGG 0.488153 1.3:-72080550 MS.gene91383:CDS
AAATGCAGAGCTGGGCTGAA+TGG 0.489105 1.3:+72080224 None:intergenic
AATGGATTTCGTTGAATTGG+AGG 0.489303 1.3:-72082269 MS.gene91383:CDS
GAAGAAGCTTGGTTATGATA+AGG 0.491651 1.3:-72079638 MS.gene91383:CDS
CTGAACCGCGAAGGAGTAGT+TGG 0.492465 1.3:-72079820 MS.gene91383:CDS
TGGTCTGTTTATCACTAACT+TGG 0.492841 1.3:+72080244 None:intergenic
TCTACGTATAACTTCAGGTC+TGG 0.494651 1.3:-72080882 MS.gene91383:CDS
AGTCCAGGTCCAAGAGTAGC+AGG 0.496349 1.3:+72080753 None:intergenic
GTGCAGAGGAGAGGATCGTA+AGG 0.498794 1.3:+72082124 None:intergenic
GTGTTTGTCCAGTATGCAGC+TGG 0.501667 1.3:+72080985 None:intergenic
TCGGCGATGGAGCGAGGGAA+AGG 0.502976 1.3:+72082016 None:intergenic
CAGCAACTCCAACTTGGTCA+AGG 0.503030 1.3:+72080577 None:intergenic
ACAGCTTTCTAAAATTCTCA+TGG 0.505567 1.3:+72079608 None:intergenic
ATGTGACCAGCATAGTAGTC+AGG 0.507191 1.3:-72079518 MS.gene91383:CDS
CATCTTATAACCTTTGGCAC+TGG 0.507470 1.3:+72079538 None:intergenic
GCTTGCTCCCTTGACCAAGT+TGG 0.508759 1.3:-72080585 MS.gene91383:CDS
AGAGGATCGTAAGGGAGAAG+AGG 0.512714 1.3:+72082133 None:intergenic
TAAGTAGGAAAGAGTTCAGC+GGG 0.512994 1.3:+72081983 None:intergenic
ACCGTGCAAAAGAACAATCC+TGG 0.513092 1.3:+72081751 None:intergenic
CACCACTGCTGCACGACGAT+GGG 0.514134 1.3:-72080145 MS.gene91383:CDS
ATATCTAGAAGTACAGGAAT+GGG 0.517316 1.3:+72079745 None:intergenic
CGAGAACCCATTGAGCGCTC+GGG 0.517565 1.3:-72080549 MS.gene91383:CDS
TCAGAGTCCACAACGAGTCC+AGG 0.518023 1.3:+72080738 None:intergenic
GAACGAATATCTAGAAGTAC+AGG 0.518525 1.3:+72079739 None:intergenic
AATATCTAGAAGTACAGGAA+TGG 0.522926 1.3:+72079744 None:intergenic
GGGCCTGCTACTCTTGGACC+TGG 0.524957 1.3:-72080756 MS.gene91383:CDS
CTTTGATTCGTTCTTCCTTG+TGG 0.525311 1.3:-72079692 MS.gene91383:CDS
GAAGATAAACGGAAGGAAGA+AGG 0.526796 1.3:+72079946 None:intergenic
TAGAAGGCCTCCGTTGGTCA+TGG 0.530254 1.3:-72082243 MS.gene91383:CDS
GAAGCTCAGCAACTCCAACT+TGG 0.535939 1.3:+72080571 None:intergenic
CGGCGATGGAGCGAGGGAAA+GGG 0.536686 1.3:+72082017 None:intergenic
AACCCATCGTCGTGCAGCAG+TGG 0.542579 1.3:+72080143 None:intergenic
ATTGCTCAGTGGAAGAAGCT+TGG 0.543785 1.3:-72079649 MS.gene91383:CDS
AAATGCTGGCTCTAGAATCA+TGG 0.548937 1.3:-72080790 MS.gene91383:CDS
CGGTACAGGCAGGGGAACAT+GGG 0.552230 1.3:-72080183 MS.gene91383:CDS
TATTCAACAGTGGTGTAAGT+AGG 0.553342 1.3:+72081968 None:intergenic
TTCAGTTTATAACACGGTAC+AGG 0.554307 1.3:-72080197 MS.gene91383:CDS
CAGAACAGTTGGTGGCTGAA+CGG 0.558794 1.3:-72079564 MS.gene91383:CDS
TCAGTGCCGCGTTGAGAGAG+TGG 0.559047 1.3:+72082160 None:intergenic
AACGAATATTGGAAAAGTGT+AGG 0.560902 1.3:+72079778 None:intergenic
TCAGTGAGTGAGACCGAGGT+TGG 0.560984 1.3:-72080333 MS.gene91383:CDS
TCTTGGACCTGGACTCGTTG+TGG 0.564738 1.3:-72080745 MS.gene91383:CDS
GAACCCATTGAGCGCTCGGG+TGG 0.564852 1.3:-72080546 MS.gene91383:CDS
ACCTAGCCTGACTACTATGC+TGG 0.565891 1.3:+72079512 None:intergenic
TTATAACACGGTACAGGCAG+GGG 0.567860 1.3:-72080191 MS.gene91383:CDS
GGGATCCAACTACTCCTTCG+CGG 0.568133 1.3:+72079815 None:intergenic
TCACCACTGCTGCACGACGA+TGG 0.569982 1.3:-72080146 MS.gene91383:CDS
AGAACTGGATGCAGAACAGT+TGG 0.570733 1.3:-72079575 MS.gene91383:CDS
TTTAAACATGATGATGATGA+GGG 0.572026 1.3:-72080462 MS.gene91383:CDS
AGCAACTCCAACTTGGTCAA+GGG 0.572830 1.3:+72080578 None:intergenic
GGTGTGCACATGATGGTTAG+AGG 0.573658 1.3:+72082181 None:intergenic
GCCATGAATTCCATGACCAA+CGG 0.578093 1.3:+72082233 None:intergenic
AAAAGCAATGCAAGTTCGGT+CGG 0.578544 1.3:+72080272 None:intergenic
CAGCAGCAATATCTGTGGAA+TGG 0.580313 1.3:+72080115 None:intergenic
CGGCTTATGCTGAACCGCGA+AGG 0.581017 1.3:-72079829 MS.gene91383:CDS
AGCTGAAATTGCAGCTCCAG+TGG 0.583120 1.3:+72080842 None:intergenic
TGAACCATAAATGCAGAGCT+GGG 0.583186 1.3:+72080216 None:intergenic
TAGCATCGGCGATGGAGCGA+GGG 0.583470 1.3:+72082011 None:intergenic
TTTATAACACGGTACAGGCA+GGG 0.591863 1.3:-72080192 MS.gene91383:CDS
TGAACGGGTTCCAGTGCCAA+AGG 0.596266 1.3:-72079548 MS.gene91383:CDS
AAAATTTGAAGATAAACGGA+AGG 0.596325 1.3:+72079939 None:intergenic
GGGCATGACACGTCTCTGCT+CGG 0.596609 1.3:+72080043 None:intergenic
GCCCATTGAAAATGTCATTG+TGG 0.599300 1.3:+72080694 None:intergenic
ATTGCAGCTCCAGTGGACCT+CGG 0.601250 1.3:+72080849 None:intergenic
CAGTATGCAGCTGGTGTGGA+CGG 0.601268 1.3:+72080994 None:intergenic
GTTTAAACATGATGATGATG+AGG 0.601853 1.3:-72080463 MS.gene91383:CDS
GGTACCACCTTGTCCAACCT+CGG 0.602216 1.3:+72080320 None:intergenic
TAAATTGGGATCTCCTTAGG+TGG 0.605088 1.3:+72079893 None:intergenic
TTAGCATCGGCGATGGAGCG+AGG 0.606203 1.3:+72082010 None:intergenic
AAGCCATCTAACAACATCAC+GGG 0.606998 1.3:+72080023 None:intergenic
GATCGTAAGGGAGAAGAGGT+AGG 0.607864 1.3:+72082137 None:intergenic
GATAATCGAGACGAGCGTAA+GGG 0.611343 1.3:+72082080 None:intergenic
GGGAAGATTAGCATCGGCGA+TGG 0.612383 1.3:+72082003 None:intergenic
ATTCCACAGATATTGCTGCT+GGG 0.613853 1.3:-72080113 MS.gene91383:CDS
CGGCGCCGCATCGAGTGCAG+AGG 0.614220 1.3:+72082110 None:intergenic
CAAAATTCAACATACACAGA+TGG 0.616886 1.3:-72079457 MS.gene91383:CDS
GACAAGGTGGTACCTGCGTG+TGG 0.618247 1.3:-72080311 MS.gene91383:CDS
AATATCATGAAGATAAACCA+TGG 0.621259 1.3:+72081790 None:intergenic
CTTAATCGGAGGTACCTGAT+CGG 0.622586 1.3:+72081712 None:intergenic
ACGAGCGTAAGGGTTTAAAA+CGG 0.624354 1.3:+72082090 None:intergenic
ACTGGATGCAGAACAGTTGG+TGG 0.626186 1.3:-72079572 MS.gene91383:CDS
CCGCATCGAGTGCAGAGGAG+AGG 0.628258 1.3:+72082115 None:intergenic
AGTGAGACCGAGGTTGGACA+AGG 0.628463 1.3:-72080327 MS.gene91383:CDS
CGCTTCAGTGAGTGAGACCG+AGG 0.630186 1.3:-72080337 MS.gene91383:CDS
GGGTTACGTTGAGAACAAAA+GGG 0.630742 1.3:+72082037 None:intergenic
TTGCAGATACTGGCAGTGCA+AGG 0.631681 1.3:-72079382 MS.gene91383:CDS
CTTCGCGGTTCAGCATAAGC+CGG 0.634012 1.3:+72079830 None:intergenic
TGCAGCTCCAGTGGACCTCG+GGG 0.636160 1.3:+72080851 None:intergenic
AGGCAGTAGAAGGCCTCCGT+TGG 0.638703 1.3:-72082249 MS.gene91383:CDS
TTCAGCGGGAAGATTAGCAT+CGG 0.640049 1.3:+72081997 None:intergenic
ACAACACTCTAAAAGACCAA+TGG 0.640553 1.3:+72080818 None:intergenic
AGAGAGTGGTGTGCACATGA+TGG 0.640666 1.3:+72082174 None:intergenic
CTTAGGTGGAACATAAATTG+GGG 0.641068 1.3:+72079907 None:intergenic
CAAGCCATCTAACAACATCA+CGG 0.645432 1.3:+72080022 None:intergenic
GTGTGCACATGATGGTTAGA+GGG 0.648276 1.3:+72082182 None:intergenic
TGCAGAGGAGAGGATCGTAA+GGG 0.656194 1.3:+72082125 None:intergenic
AAACCCAGCAGCAATATCTG+TGG 0.656981 1.3:+72080110 None:intergenic
AGAAGAAGAGTATTCAACAG+TGG 0.657516 1.3:+72081958 None:intergenic
TCTAGAAGTACAGGAATGGG+TGG 0.661190 1.3:+72079748 None:intergenic
ACACAGCCTGTTCCAAAACA+GGG 0.661300 1.3:-72080966 MS.gene91383:CDS
ACCAGCATAGTAGTCAGGCT+AGG 0.662465 1.3:-72079513 MS.gene91383:CDS
ATGAATTCCATGACCAACGG+AGG 0.664818 1.3:+72082236 None:intergenic
TGTCCAGTATGCAGCTGGTG+TGG 0.665544 1.3:+72080990 None:intergenic
ACCCATAATGGATCACCACA+AGG 0.667206 1.3:+72079677 None:intergenic
TTATGGTTCAGTTTATAACA+CGG 0.670322 1.3:-72080203 MS.gene91383:CDS
CCTCTCCTCTGCACTCGATG+CGG 0.680345 1.3:-72082115 MS.gene91383:CDS
TGTATTCAACTTCCACACGC+AGG 0.686684 1.3:+72080299 None:intergenic
TCTATAGGCAGATTGCGAAG+AGG 0.694661 1.3:-72080641 MS.gene91383:CDS
GAGACCGAGGTTGGACAAGG+TGG 0.712733 1.3:-72080324 MS.gene91383:CDS
CAAAGAGCAAGATAGAATCG+GGG 0.712881 1.3:+72079710 None:intergenic
GCAGCTCCAGTGGACCTCGG+GGG 0.714974 1.3:+72080852 None:intergenic
GTAAGTAGGAAAGAGTTCAG+CGG 0.716936 1.3:+72081982 None:intergenic
ATGGGTCCAAGATTGCTCAG+TGG 0.775938 1.3:-72079660 MS.gene91383:CDS
TGCACACCACTCTCTCAACG+CGG 0.808428 1.3:-72082166 MS.gene91383:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTAATTTTACATTAAATTTG+AGG - chr1.3:72080479-72080498 MS.gene91383:CDS 15.0%
!! TATACATTTCCTAAATTGAT+CGG + chr1.3:72081155-72081174 None:intergenic 20.0%
!! TATGGCTCAAATAAAATAAT+CGG + chr1.3:72080315-72080334 None:intergenic 20.0%
! AAAATTTGAAGATAAACGGA+AGG + chr1.3:72081710-72081729 None:intergenic 25.0%
! AATATCATGAAGATAAACCA+TGG + chr1.3:72079859-72079878 None:intergenic 25.0%
! ACTAATGATGTCAAAATTTC+TGG - chr1.3:72081250-72081269 MS.gene91383:intron 25.0%
! ATAACAGTGTATGAATGAAA+AGG + chr1.3:72079962-72079981 None:intergenic 25.0%
! ATTAGTAGTCACTATTTCAA+TGG + chr1.3:72081236-72081255 None:intergenic 25.0%
! GGGAAAAATTTGAAGATAAA+CGG + chr1.3:72081714-72081733 None:intergenic 25.0%
! GTTAGAGACATCAATAAATT+GGG + chr1.3:72081770-72081789 None:intergenic 25.0%
! TAGCTTATGAAAACAACTTA+TGG + chr1.3:72080333-72080352 None:intergenic 25.0%
! TGTTAGAGACATCAATAAAT+TGG + chr1.3:72081771-72081790 None:intergenic 25.0%
! TTATGGTTCAGTTTATAACA+CGG - chr1.3:72081443-72081462 MS.gene91383:intron 25.0%
!! TGTAGGTTGAATCATTATAA+GGG + chr1.3:72081854-72081873 None:intergenic 25.0%
!! TTTAAACATGATGATGATGA+GGG - chr1.3:72081184-72081203 MS.gene91383:intron 25.0%
!! TTTTCCAATATTCGTTTGAT+GGG - chr1.3:72081875-72081894 MS.gene91383:CDS 25.0%
!!! TTCTAAAATTCTCATGGTTT+GGG + chr1.3:72082035-72082054 None:intergenic 25.0%
!!! TTTCTAAAATTCTCATGGTT+TGG + chr1.3:72082036-72082055 None:intergenic 25.0%
!!! TTTTTTTTGTCTCTCAGATA+CGG - chr1.3:72080612-72080631 MS.gene91383:CDS 25.0%
AACAAGCTGAAAACAACTTA+TGG - chr1.3:72080371-72080390 MS.gene91383:CDS 30.0%
AGAAAAAAGCAATGCAAGTT+CGG + chr1.3:72081381-72081400 None:intergenic 30.0%
ATCAAAGAGCAAGATAGAAT+CGG + chr1.3:72081941-72081960 None:intergenic 30.0%
ATTAATGCAAGATGTTCTCT+AGG - chr1.3:72080090-72080109 MS.gene91383:CDS 30.0%
ATTACAAAAACAAAAGCAGG+AGG + chr1.3:72079729-72079748 None:intergenic 30.0%
CAAAATTCAACATACACAGA+TGG - chr1.3:72082189-72082208 MS.gene91383:CDS 30.0%
CATTTGAATCCGATCAATTT+AGG - chr1.3:72081143-72081162 MS.gene91383:intron 30.0%
CTAAATCTTGCAGTTTCTAT+AGG - chr1.3:72080990-72081009 MS.gene91383:CDS 30.0%
GAACATAAATTGGGGATAAA+GGG + chr1.3:72081734-72081753 None:intergenic 30.0%
GAGAACATCTTGCATTAATT+CGG + chr1.3:72080089-72080108 None:intergenic 30.0%
TCGATTACAAAAACAAAAGC+AGG + chr1.3:72079732-72079751 None:intergenic 30.0%
TTCATTCTACGTATAACTTC+AGG - chr1.3:72080759-72080778 MS.gene91383:CDS 30.0%
TTGATCGGATTCAAATGATT+CGG + chr1.3:72081140-72081159 None:intergenic 30.0%
TTTGATTACGTTTGATTCCA+TGG - chr1.3:72079839-72079858 MS.gene91383:CDS 30.0%
! AACGAATATTGGAAAAGTGT+AGG + chr1.3:72081871-72081890 None:intergenic 30.0%
! AATATCTAGAAGTACAGGAA+TGG + chr1.3:72081905-72081924 None:intergenic 30.0%
! ATATCTAGAAGTACAGGAAT+GGG + chr1.3:72081904-72081923 None:intergenic 30.0%
! CTTTTCCAATATTCGTTTGA+TGG - chr1.3:72081874-72081893 MS.gene91383:CDS 30.0%
! GTGTAGGTTGAATCATTATA+AGG + chr1.3:72081855-72081874 None:intergenic 30.0%
! GTTTAAACATGATGATGATG+AGG - chr1.3:72081183-72081202 MS.gene91383:intron 30.0%
!! ACAGCTTTCTAAAATTCTCA+TGG + chr1.3:72082041-72082060 None:intergenic 30.0%
!! CTAAACTCACATTCTGAAAT+TGG + chr1.3:72080716-72080735 None:intergenic 30.0%
!! TGAATGAAAAGGTGCTTAAT+CGG + chr1.3:72079951-72079970 None:intergenic 30.0%
!! TGAGAATTTTAGAAAGCTGT+TGG - chr1.3:72082041-72082060 MS.gene91383:CDS 30.0%
!!! TTTTTTCTAAGAGACATGCA+AGG + chr1.3:72081286-72081305 None:intergenic 30.0%
AGAATCATGGTATTCACTTC+TGG - chr1.3:72080869-72080888 MS.gene91383:CDS 35.0%
CAATAAATTGGGATCTCCTT+AGG + chr1.3:72081759-72081778 None:intergenic 35.0%
CCCATTGAAAATGTCATTGT+GGG + chr1.3:72080954-72080973 None:intergenic 35.0%
CCTTAGGTGGAACATAAATT+GGG + chr1.3:72081743-72081762 None:intergenic 35.0%
CTTAGGTGGAACATAAATTG+GGG + chr1.3:72081742-72081761 None:intergenic 35.0%
CTTCACACTTAGACATTGTT+TGG - chr1.3:72080211-72080230 MS.gene91383:CDS 35.0%
GAAGAAGCTTGGTTATGATA+AGG - chr1.3:72082008-72082027 MS.gene91383:CDS 35.0%
GAATCATGGTATTCACTTCT+GGG - chr1.3:72080870-72080889 MS.gene91383:CDS 35.0%
GGAACATAAATTGGGGATAA+AGG + chr1.3:72081735-72081754 None:intergenic 35.0%
GTAATAATCAATCAGTGCTC+TGG - chr1.3:72080181-72080200 MS.gene91383:CDS 35.0%
TATTCAACAGTGGTGTAAGT+AGG + chr1.3:72079681-72079700 None:intergenic 35.0%
TCAAAGAGCAAGATAGAATC+GGG + chr1.3:72081940-72081959 None:intergenic 35.0%
TCCTTAGGTGGAACATAAAT+TGG + chr1.3:72081744-72081763 None:intergenic 35.0%
TCGATTATCAATCACGTATC+TGG - chr1.3:72079580-72079599 MS.gene91383:CDS 35.0%
TCTAGATCAATTGCAGATAC+TGG - chr1.3:72082254-72082273 MS.gene91383:CDS 35.0%
TCTCAACTAAGTAACTAAGC+TGG + chr1.3:72080510-72080529 None:intergenic 35.0%
TGGTCACATCTTATAACCTT+TGG + chr1.3:72082117-72082136 None:intergenic 35.0%
TGGTCTGTTTATCACTAACT+TGG + chr1.3:72081405-72081424 None:intergenic 35.0%
TTCAACATACACAGATGGTT+CGG - chr1.3:72082194-72082213 MS.gene91383:CDS 35.0%
TTCAGTTTATAACACGGTAC+AGG - chr1.3:72081449-72081468 MS.gene91383:intron 35.0%
! ACAACACTCTAAAAGACCAA+TGG + chr1.3:72080831-72080850 None:intergenic 35.0%
! ACCCACAATGACATTTTCAA+TGG - chr1.3:72080950-72080969 MS.gene91383:CDS 35.0%
! ATCCGTTTTACCTCTAAGTT+TGG - chr1.3:72081658-72081677 MS.gene91383:intron 35.0%
! CCCACAATGACATTTTCAAT+GGG - chr1.3:72080951-72080970 MS.gene91383:CDS 35.0%
! GAACGAATATCTAGAAGTAC+AGG + chr1.3:72081910-72081929 None:intergenic 35.0%
! GTTGAATTTTGCGTAACAGA+TGG + chr1.3:72082180-72082199 None:intergenic 35.0%
! TCCGTTTTACCTCTAAGTTT+GGG - chr1.3:72081659-72081678 MS.gene91383:intron 35.0%
! TGGTTCGGATATCATCTTTA+CGG - chr1.3:72082209-72082228 MS.gene91383:CDS 35.0%
!! AGAAGAAGAGTATTCAACAG+TGG + chr1.3:72079691-72079710 None:intergenic 35.0%
!! GTTGTTTTCATAAGCTATCC+TGG - chr1.3:72080336-72080355 MS.gene91383:CDS 35.0%
!!! GAGTGTTGTTTTGTAAATGC+TGG - chr1.3:72080842-72080861 MS.gene91383:CDS 35.0%
AAAAGCAATGCAAGTTCGGT+CGG + chr1.3:72081377-72081396 None:intergenic 40.0%
AAAGCAACAAGAGCAGTATC+AGG + chr1.3:72079822-72079841 None:intergenic 40.0%
AAGCCATCTAACAACATCAC+GGG + chr1.3:72081626-72081645 None:intergenic 40.0%
AATGTCATTGTGGGTTCTCA+TGG + chr1.3:72080945-72080964 None:intergenic 40.0%
ACGAGCGTAAGGGTTTAAAA+CGG + chr1.3:72079559-72079578 None:intergenic 40.0%
AGGGATTGTTAGGTCTGATT+TGG + chr1.3:72079448-72079467 None:intergenic 40.0%
AGGGTTACGTTGAGAACAAA+AGG + chr1.3:72079613-72079632 None:intergenic 40.0%
ATTCCACAGATATTGCTGCT+GGG - chr1.3:72081533-72081552 MS.gene91383:intron 40.0%
CAAAGAGCAAGATAGAATCG+GGG + chr1.3:72081939-72081958 None:intergenic 40.0%
CAAGCCATCTAACAACATCA+CGG + chr1.3:72081627-72081646 None:intergenic 40.0%
CATCTTATAACCTTTGGCAC+TGG + chr1.3:72082111-72082130 None:intergenic 40.0%
CCCAATTTATGTTCCACCTA+AGG - chr1.3:72081740-72081759 MS.gene91383:CDS 40.0%
CCCCAAACTTAGAGGTAAAA+CGG + chr1.3:72081663-72081682 None:intergenic 40.0%
CCTAACTAACTACCTGTCTA+AGG + chr1.3:72080431-72080450 None:intergenic 40.0%
CCTTAGACAGGTAGTTAGTT+AGG - chr1.3:72080428-72080447 MS.gene91383:CDS 40.0%
CTGATGAAACTGCGTATTTC+CGG - chr1.3:72081797-72081816 MS.gene91383:CDS 40.0%
GAAGATAAACGGAAGGAAGA+AGG + chr1.3:72081703-72081722 None:intergenic 40.0%
GCCCATTGAAAATGTCATTG+TGG + chr1.3:72080955-72080974 None:intergenic 40.0%
GGGTTACGTTGAGAACAAAA+GGG + chr1.3:72079612-72079631 None:intergenic 40.0%
GTAAGTAGGAAAGAGTTCAG+CGG + chr1.3:72079667-72079686 None:intergenic 40.0%
GTACCTGATCGGAAGAAAAT+TGG + chr1.3:72079926-72079945 None:intergenic 40.0%
TAAATTGGGATCTCCTTAGG+TGG + chr1.3:72081756-72081775 None:intergenic 40.0%
TAAGTAGGAAAGAGTTCAGC+GGG + chr1.3:72079666-72079685 None:intergenic 40.0%
TAGACAGGTAGTTAGTTAGG+TGG - chr1.3:72080431-72080450 MS.gene91383:CDS 40.0%
TCCTTGTGGTGATCCATTAT+GGG - chr1.3:72081968-72081987 MS.gene91383:CDS 40.0%
TCTACGTATAACTTCAGGTC+TGG - chr1.3:72080764-72080783 MS.gene91383:CDS 40.0%
TGAACCATAAATGCAGAGCT+GGG + chr1.3:72081433-72081452 None:intergenic 40.0%
TGATGGTTAGAGGGATTGTT+AGG + chr1.3:72079458-72079477 None:intergenic 40.0%
TGTTCCAAAACAGGGATTTC+TGG - chr1.3:72080688-72080707 MS.gene91383:CDS 40.0%
TTCCTTGTGGTGATCCATTA+TGG - chr1.3:72081967-72081986 MS.gene91383:CDS 40.0%
TTTATAACACGGTACAGGCA+GGG - chr1.3:72081454-72081473 MS.gene91383:intron 40.0%
! ACACCAATTTTCTTCCGATC+AGG - chr1.3:72079920-72079939 MS.gene91383:CDS 40.0%
! CAATGACATTTTCAATGGGC+AGG - chr1.3:72080955-72080974 MS.gene91383:CDS 40.0%
! CCGTTTTACCTCTAAGTTTG+GGG - chr1.3:72081660-72081679 MS.gene91383:intron 40.0%
! CGTAACAGATGGATTCAACT+TGG + chr1.3:72082169-72082188 None:intergenic 40.0%
! CTTTGATTCGTTCTTCCTTG+TGG - chr1.3:72081954-72081973 MS.gene91383:CDS 40.0%
! TCCAGGATTGTTCTTTTGCA+CGG - chr1.3:72079894-72079913 MS.gene91383:CDS 40.0%
! TCGTTGTGGACTCTGATTTT+CGG - chr1.3:72080915-72080934 MS.gene91383:CDS 40.0%
! TTCAGTTTTCTCACTGTTCC+AGG - chr1.3:72079877-72079896 MS.gene91383:CDS 40.0%
!! AAATGCTGGCTCTAGAATCA+TGG - chr1.3:72080856-72080875 MS.gene91383:CDS 40.0%
!! AGGTCTGATTTGGTTGTTGA+TGG + chr1.3:72079438-72079457 None:intergenic 40.0%
!! ATGAAAAGGTGCTTAATCGG+AGG + chr1.3:72079948-72079967 None:intergenic 40.0%
!! GTCAAAATTTCTGGAGCTCT+TGG - chr1.3:72081259-72081278 MS.gene91383:intron 40.0%
!!! AGAAATCCCTGTTTTGGAAC+AGG + chr1.3:72080689-72080708 None:intergenic 40.0%
AAACCCAGCAGCAATATCTG+TGG + chr1.3:72081539-72081558 None:intergenic 45.0%
AACACAGCCTGTTCCAAAAC+AGG - chr1.3:72080679-72080698 MS.gene91383:CDS 45.0%
AACTACCTGTCTAAGGACGT+AGG + chr1.3:72080424-72080443 None:intergenic 45.0%
AACTGTTCTGCATCCAGTTC+TGG + chr1.3:72082072-72082091 None:intergenic 45.0%
ACACAGCCTGTTCCAAAACA+GGG - chr1.3:72080680-72080699 MS.gene91383:CDS 45.0%
ACCGTGCAAAAGAACAATCC+TGG + chr1.3:72079898-72079917 None:intergenic 45.0%
ACTACCTGTCTAAGGACGTA+GGG + chr1.3:72080423-72080442 None:intergenic 45.0%
AGAACTGGATGCAGAACAGT+TGG - chr1.3:72082071-72082090 MS.gene91383:CDS 45.0%
AGCAACTCCAACTTGGTCAA+GGG + chr1.3:72081071-72081090 None:intergenic 45.0%
ATGAATTCCATGACCAACGG+AGG + chr1.3:72079413-72079432 None:intergenic 45.0%
ATGCCCGTGATGTTGTTAGA+TGG - chr1.3:72081620-72081639 MS.gene91383:intron 45.0%
ATGTGACCAGCATAGTAGTC+AGG - chr1.3:72082128-72082147 MS.gene91383:CDS 45.0%
ATTGCTCAGTGGAAGAAGCT+TGG - chr1.3:72081997-72082016 MS.gene91383:CDS 45.0%
CAAGATAGAATCGGGGCAAA+TGG + chr1.3:72081932-72081951 None:intergenic 45.0%
CACATAGTCCCCAAACTTAG+AGG + chr1.3:72081671-72081690 None:intergenic 45.0%
CAGCAGCAATATCTGTGGAA+TGG + chr1.3:72081534-72081553 None:intergenic 45.0%
CATTCCACAGATATTGCTGC+TGG - chr1.3:72081532-72081551 MS.gene91383:intron 45.0%
CGGAAATACGCAGTTTCATC+AGG + chr1.3:72081799-72081818 None:intergenic 45.0%
CTGAACCATAAATGCAGAGC+TGG + chr1.3:72081434-72081453 None:intergenic 45.0%
CTTCTTCCACTGAGCAATCT+TGG + chr1.3:72081995-72082014 None:intergenic 45.0%
GAGCAATCTTGGACCCATAA+TGG + chr1.3:72081984-72082003 None:intergenic 45.0%
GATAATCGAGACGAGCGTAA+GGG + chr1.3:72079569-72079588 None:intergenic 45.0%
GCCATGAATTCCATGACCAA+CGG + chr1.3:72079416-72079435 None:intergenic 45.0%
GTGGCCCATCAAACGAATAT+TGG + chr1.3:72081882-72081901 None:intergenic 45.0%
GTGTGCACATGATGGTTAGA+GGG + chr1.3:72079467-72079486 None:intergenic 45.0%
GTTGAATTGGAGGCAGTAGA+AGG - chr1.3:72079387-72079406 MS.gene91383:CDS 45.0%
GTTTATAACACGGTACAGGC+AGG - chr1.3:72081453-72081472 MS.gene91383:intron 45.0%
TCCGTTGGTCATGGAATTCA+TGG - chr1.3:72079412-72079431 MS.gene91383:CDS 45.0%
TCTATAGGCAGATTGCGAAG+AGG - chr1.3:72081005-72081024 MS.gene91383:CDS 45.0%
TGATAATCGAGACGAGCGTA+AGG + chr1.3:72079570-72079589 None:intergenic 45.0%
TGATCAAGAAGCAGCAGCTT+CGG - chr1.3:72081558-72081577 MS.gene91383:intron 45.0%
TGTATTCAACTTCCACACGC+AGG + chr1.3:72081350-72081369 None:intergenic 45.0%
TTATAACACGGTACAGGCAG+GGG - chr1.3:72081455-72081474 MS.gene91383:intron 45.0%
TTCAGCGGGAAGATTAGCAT+CGG + chr1.3:72079652-72079671 None:intergenic 45.0%
! AAGCTATCCTGGAGTGCTTA+CGG - chr1.3:72080347-72080366 MS.gene91383:CDS 45.0%
! GGAACCAGAAATCCCTGTTT+TGG + chr1.3:72080695-72080714 None:intergenic 45.0%
! TCTAGAAGTACAGGAATGGG+TGG + chr1.3:72081901-72081920 None:intergenic 45.0%
!! ACCCATAATGGATCACCACA+AGG + chr1.3:72081972-72081991 None:intergenic 45.0%
!! CTTAATCGGAGGTACCTGAT+CGG + chr1.3:72079937-72079956 None:intergenic 45.0%
AAATGCAGAGCTGGGCTGAA+TGG + chr1.3:72081425-72081444 None:intergenic 50.0%
ACCAGCATAGTAGTCAGGCT+AGG - chr1.3:72082133-72082152 MS.gene91383:CDS 50.0%
ACCTAGCCTGACTACTATGC+TGG + chr1.3:72082137-72082156 None:intergenic 50.0%
ACTGGATGCAGAACAGTTGG+TGG - chr1.3:72082074-72082093 MS.gene91383:CDS 50.0%
AGAAGCAGCAGCTTCGGTTA+TGG - chr1.3:72081564-72081583 MS.gene91383:intron 50.0%
AGAGAGTGGTGTGCACATGA+TGG + chr1.3:72079475-72079494 None:intergenic 50.0%
AGAGGATCGTAAGGGAGAAG+AGG + chr1.3:72079516-72079535 None:intergenic 50.0%
AGCTGAAATTGCAGCTCCAG+TGG + chr1.3:72080807-72080826 None:intergenic 50.0%
ATGGGTCCAAGATTGCTCAG+TGG - chr1.3:72081986-72082005 MS.gene91383:CDS 50.0%
CAGCAACTCCAACTTGGTCA+AGG + chr1.3:72081072-72081091 None:intergenic 50.0%
CGGAAGGAAGAAGGATCTTC+TGG + chr1.3:72081694-72081713 None:intergenic 50.0%
GAAGCTCAGCAACTCCAACT+TGG + chr1.3:72081078-72081097 None:intergenic 50.0%
GATCGTAAGGGAGAAGAGGT+AGG + chr1.3:72079512-72079531 None:intergenic 50.0%
GCTGCAATTTCAGCTGCCAT+TGG - chr1.3:72080812-72080831 MS.gene91383:CDS 50.0%
GGTGTGCACATGATGGTTAG+AGG + chr1.3:72079468-72079487 None:intergenic 50.0%
GGTGTGGACGGCTAATGTTT+AGG + chr1.3:72080643-72080662 None:intergenic 50.0%
GTGTTTGTCCAGTATGCAGC+TGG + chr1.3:72080664-72080683 None:intergenic 50.0%
TCAGCCCAGCTCTGCATTTA+TGG - chr1.3:72081426-72081445 MS.gene91383:intron 50.0%
TGCAGAGGAGAGGATCGTAA+GGG + chr1.3:72079524-72079543 None:intergenic 50.0%
TTGCAGATACTGGCAGTGCA+AGG - chr1.3:72082264-72082283 MS.gene91383:CDS 50.0%
!! AGAACAGTTGGTGGCTGAAC+GGG - chr1.3:72082083-72082102 MS.gene91383:CDS 50.0%
!! CAGAACAGTTGGTGGCTGAA+CGG - chr1.3:72082082-72082101 MS.gene91383:CDS 50.0%
AAATCCACCCGAGCGCTCAA+TGG + chr1.3:72081107-72081126 None:intergenic 55.0%
AATCCACCCGAGCGCTCAAT+GGG + chr1.3:72081106-72081125 None:intergenic 55.0%
ACACGTCTCTGCTCGGAGAA+TGG + chr1.3:72081599-72081618 None:intergenic 55.0%
ACTTCTGGGCCTGCTACTCT+TGG - chr1.3:72080884-72080903 MS.gene91383:CDS 55.0%
AGTCCAGGTCCAAGAGTAGC+AGG + chr1.3:72080896-72080915 None:intergenic 55.0%
AGTGAGACCGAGGTTGGACA+AGG - chr1.3:72081319-72081338 MS.gene91383:intron 55.0%
ATTGCAGCTCCAGTGGACCT+CGG + chr1.3:72080800-72080819 None:intergenic 55.0%
CAGTATGCAGCTGGTGTGGA+CGG + chr1.3:72080655-72080674 None:intergenic 55.0%
CTCTCCCTACGTCCTTAGAC+AGG - chr1.3:72080416-72080435 MS.gene91383:CDS 55.0%
CTGAACCGCGAAGGAGTAGT+TGG - chr1.3:72081826-72081845 MS.gene91383:CDS 55.0%
CTTCGCGGTTCAGCATAAGC+CGG + chr1.3:72081819-72081838 None:intergenic 55.0%
CTTGTTGCCGTAAGCACTCC+AGG + chr1.3:72080357-72080376 None:intergenic 55.0%
GCTGTTGGAAGCTCCAGAAC+TGG - chr1.3:72082056-72082075 MS.gene91383:CDS 55.0%
GCTTGCTCCCTTGACCAAGT+TGG - chr1.3:72081061-72081080 MS.gene91383:intron 55.0%
GGGATCCAACTACTCCTTCG+CGG + chr1.3:72081834-72081853 None:intergenic 55.0%
GGTACCACCTTGTCCAACCT+CGG + chr1.3:72081329-72081348 None:intergenic 55.0%
GTGCAGAGGAGAGGATCGTA+AGG + chr1.3:72079525-72079544 None:intergenic 55.0%
TAGAAGGCCTCCGTTGGTCA+TGG - chr1.3:72079403-72079422 MS.gene91383:CDS 55.0%
TCAGAGTCCACAACGAGTCC+AGG + chr1.3:72080911-72080930 None:intergenic 55.0%
TCAGTGAGTGAGACCGAGGT+TGG - chr1.3:72081313-72081332 MS.gene91383:intron 55.0%
TCGAGAACCCATTGAGCGCT+CGG - chr1.3:72081096-72081115 MS.gene91383:intron 55.0%
TCTTGGACCTGGACTCGTTG+TGG - chr1.3:72080901-72080920 MS.gene91383:CDS 55.0%
TGCACACCACTCTCTCAACG+CGG - chr1.3:72079480-72079499 MS.gene91383:CDS 55.0%
TGTCCAGTATGCAGCTGGTG+TGG + chr1.3:72080659-72080678 None:intergenic 55.0%
! TGAACGGGTTCCAGTGCCAA+AGG - chr1.3:72082098-72082117 MS.gene91383:CDS 55.0%
!! GGGAAGATTAGCATCGGCGA+TGG + chr1.3:72079646-72079665 None:intergenic 55.0%
AACCCATCGTCGTGCAGCAG+TGG + chr1.3:72081506-72081525 None:intergenic 60.0%
ACGGTACAGGCAGGGGAACA+TGG - chr1.3:72081462-72081481 MS.gene91383:intron 60.0%
AGGCAGTAGAAGGCCTCCGT+TGG - chr1.3:72079397-72079416 MS.gene91383:CDS 60.0%
CACCACTGCTGCACGACGAT+GGG - chr1.3:72081501-72081520 MS.gene91383:intron 60.0%
CCTCTCCTCTGCACTCGATG+CGG - chr1.3:72079531-72079550 MS.gene91383:CDS 60.0%
CGAGAACCCATTGAGCGCTC+GGG - chr1.3:72081097-72081116 MS.gene91383:intron 60.0%
CGCTTCAGTGAGTGAGACCG+AGG - chr1.3:72081309-72081328 MS.gene91383:intron 60.0%
CGGCTTATGCTGAACCGCGA+AGG - chr1.3:72081817-72081836 MS.gene91383:CDS 60.0%
CGGTACAGGCAGGGGAACAT+GGG - chr1.3:72081463-72081482 MS.gene91383:intron 60.0%
CGTCCACACCAGCTGCATAC+TGG - chr1.3:72080653-72080672 MS.gene91383:CDS 60.0%
GACAAGGTGGTACCTGCGTG+TGG - chr1.3:72081335-72081354 MS.gene91383:intron 60.0%
GAGACCGAGGTTGGACAAGG+TGG - chr1.3:72081322-72081341 MS.gene91383:intron 60.0%
GGGCATGACACGTCTCTGCT+CGG + chr1.3:72081606-72081625 None:intergenic 60.0%
TCACCACTGCTGCACGACGA+TGG - chr1.3:72081500-72081519 MS.gene91383:intron 60.0%
TCAGTGCCGCGTTGAGAGAG+TGG + chr1.3:72079489-72079508 None:intergenic 60.0%
TTGCAGCTCCAGTGGACCTC+GGG + chr1.3:72080799-72080818 None:intergenic 60.0%
! TGAGCGCTCGGGTGGATTTG+TGG - chr1.3:72081108-72081127 MS.gene91383:intron 60.0%
!! TAGCATCGGCGATGGAGCGA+GGG + chr1.3:72079638-72079657 None:intergenic 60.0%
!! TTAGCATCGGCGATGGAGCG+AGG + chr1.3:72079639-72079658 None:intergenic 60.0%
CCGCATCGAGTGCAGAGGAG+AGG + chr1.3:72079534-72079553 None:intergenic 65.0%
CGGCGATGGAGCGAGGGAAA+GGG + chr1.3:72079632-72079651 None:intergenic 65.0%
GAACCCATTGAGCGCTCGGG+TGG - chr1.3:72081100-72081119 MS.gene91383:intron 65.0%
GGGCCTGCTACTCTTGGACC+TGG - chr1.3:72080890-72080909 MS.gene91383:CDS 65.0%
TCGGCGATGGAGCGAGGGAA+AGG + chr1.3:72079633-72079652 None:intergenic 65.0%
TGCAGCTCCAGTGGACCTCG+GGG + chr1.3:72080798-72080817 None:intergenic 65.0%
CTCCAGTGGACCTCGGGGGA+CGG + chr1.3:72080793-72080812 None:intergenic 70.0%
GCAGCTCCAGTGGACCTCGG+GGG + chr1.3:72080797-72080816 None:intergenic 70.0%
AGCCGTCCCCCGAGGTCCAC+TGG - chr1.3:72080788-72080807 MS.gene91383:CDS 75.0%
CGGCGCCGCATCGAGTGCAG+AGG + chr1.3:72079539-72079558 None:intergenic 75.0%
GGTCTGGAAGCCGTCCCCCG+AGG - chr1.3:72080780-72080799 MS.gene91383:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 72079378 72082290 72079378 ID=MS.gene91383
chr1.3 mRNA 72079378 72082290 72079378 ID=MS.gene91383.t1;Parent=MS.gene91383
chr1.3 exon 72081727 72082290 72081727 ID=MS.gene91383.t1.exon1;Parent=MS.gene91383.t1
chr1.3 CDS 72081727 72082290 72081727 ID=cds.MS.gene91383.t1;Parent=MS.gene91383.t1
chr1.3 exon 72079378 72081039 72079378 ID=MS.gene91383.t1.exon2;Parent=MS.gene91383.t1
chr1.3 CDS 72079378 72081039 72079378 ID=cds.MS.gene91383.t1;Parent=MS.gene91383.t1
Gene Sequence

>MS.gene91383

ATGGATTTCGTTGAATTGGAGGCAGTAGAAGGCCTCCGTTGGTCATGGAATTCATGGCCATCAACAACCAAATCAGACCTAACAATCCCTCTAACCATCATGTGCACACCACTCTCTCAACGCGGCACTGACCTACCTCTTCTCCCTTACGATCCTCTCCTCTGCACTCGATGCGGCGCCGTTTTAAACCCTTACGCTCGTCTCGATTATCAATCACGTATCTGGCACTGTCCCTTTTGTTCTCAACGTAACCCTTTCCCTCGCTCCATCGCCGATGCTAATCTTCCCGCTGAACTCTTTCCTACTTACACCACTGTTGAATACTCTTCTTCTTCTTCACTTTTTCATCCTCCTGCTTTTGTTTTTGTAATCGATGTTTCAACTTCTCAAGATGAGCTTTGTTCACTTAAGAATGAGATTTTACTTCTTCTTCATCATTTGCCTGATACTGCTCTTGTTGCTTTGATTACGTTTGATTCCATGGTTTATCTTCATGATATTCAGTTTTCTCACTGTTCCAGGATTGTTCTTTTGCACGGTGAACACCAATTTTCTTCCGATCAGGTACCTCCGATTAAGCACCTTTTCATTCATACACTGTTATATTGTATATGATTATGATTATCATTATGCTTTCTCTCTAATTCAGTATTAATCAGTACTTTGATTAGATTCATGCTTAGACAGTTAGTTAGTTAGTTAAGTAAGCCGAATTAATGCAAGATGTTCTCTAGGTTTACATTACAGTTGAGTGCACTGCTGCTTAGTTTTCTTTTTAACTACATTGCTTTCTTTCTAATTTAGTAATAATCAATCAGTGCTCTGGTTATTAGCTTCACACTTAGACATTGTTTGGATAAACAACTTCATTAAGCGCTTATCATATTTTTATATGAGCTATAAGCTATTTCTATAACAAAAGATAAAATGAAGTCCGATTATTTTATTTGAGCCATAAGTTGTTTTCATAAGCTATCCTGGAGTGCTTACGGCAACAAGCTGAAAACAACTTATGGAGTCATAATCTGTCTCTATAAGCTCTCCCTACGTCCTTAGACAGGTAGTTAGTTAGGTGGTTGCTAAATTAATGCAAGATATTTGCTAATTTTACATTAAATTTGAGGACACTCCAGCTTAGTTACTTAGTTGAGAAATTGCTTATTAATGCAATCTGTTGATAGTTTTTACATTATAGTTGAGTGCACTACACTGCTTTCTGCTGATTATTTGTTTTTTTTTTTTGTCTCTCAGATACGGCAGTTCCTAAACATTAGCCGTCCACACCAGCTGCATACTGGACAAACACAGCCTGTTCCAAAACAGGGATTTCTGGTTCCAATTTCAGAATGTGAGTTTAGTATCACAGCTGCAATTGAAGATATTCATTCTACGTATAACTTCAGGTCTGGAAGCCGTCCCCCGAGGTCCACTGGAGCTGCAATTTCAGCTGCCATTGGTCTTTTAGAGTGTTGTTTTGTAAATGCTGGCTCTAGAATCATGGTATTCACTTCTGGGCCTGCTACTCTTGGACCTGGACTCGTTGTGGACTCTGATTTTCGGCAATCCATGAGAACCCACAATGACATTTTCAATGGGCAGGCGAGACATCATTCTAAATCTTGCAGTTTCTATAGGCAGATTGCGAAGAGGCTGTCTGATGCGTCTGTAGTTCTTGATCTGTTTGCTTGCTCCCTTGACCAAGTTGGAGTTGCTGAGCTTCGAGAACCCATTGAGCGCTCGGGTGGATTTGTGGTTCTTGCCGAATCATTTGAATCCGATCAATTTAGGAAATGTATAAGACACTTGTTTAAACATGATGATGATGAGGGATTTTTGAAGATGAATTTTGATGCAACCATTGAAATAGTGACTACTAATGATGTCAAAATTTCTGGAGCTCTTGGACCTTGCATGTCTCTTAGAAAAAAGAACGCTTCAGTGAGTGAGACCGAGGTTGGACAAGGTGGTACCTGCGTGTGGAAGTTGAATACACTCACCGACCGAACTTGCATTGCTTTTTTCTTCCAAGTTAGTGATAAACAGACCATTCAGCCCAGCTCTGCATTTATGGTTCAGTTTATAACACGGTACAGGCAGGGGAACATGGGTCTCAGAAAAAGAGTCACCACTGCTGCACGACGATGGGTTGCAAACCATTCCACAGATATTGCTGCTGGGTTTGATCAAGAAGCAGCAGCTTCGGTTATGGCAAGACTTGCCATTCTCCGAGCAGAGACGTGTCATGCCCGTGATGTTGTTAGATGGCTTGATGACACACTTATCCGTTTTACCTCTAAGTTTGGGGACTATGTGCCAGAAGATCCTTCTTCCTTCCGTTTATCTTCAAATTTTTCCCTTTATCCCCAATTTATGTTCCACCTAAGGAGATCCCAATTTATTGATGTCTCTAACACTACTCCTGATGAAACTGCGTATTTCCGGCTTATGCTGAACCGCGAAGGAGTAGTTGGATCCCTTATAATGATTCAACCTACACTTTTCCAATATTCGTTTGATGGGCCACCCATTCCTGTACTTCTAGATATTCGTTCCATTTGCCCCGATTCTATCTTGCTCTTTGATTCGTTCTTCCTTGTGGTGATCCATTATGGGTCCAAGATTGCTCAGTGGAAGAAGCTTGGTTATGATAAGGACCCAAACCATGAGAATTTTAGAAAGCTGTTGGAAGCTCCAGAACTGGATGCAGAACAGTTGGTGGCTGAACGGGTTCCAGTGCCAAAGGTTATAAGATGTGACCAGCATAGTAGTCAGGCTAGGTTTCTTCTTGCCAAGTTGAATCCATCTGTTACGCAAAATTCAACATACACAGATGGTTCGGATATCATCTTTACGGATGACTTGAGCTTGCAAGTTTTTCTAGATCAATTGCAGATACTGGCAGTGCAAGGCTGA
Protein sequence

>MS.gene91383.t1

MDFVELEAVEGLRWSWNSWPSTTKSDLTIPLTIMCTPLSQRGTDLPLLPYDPLLCTRCGAVLNPYARLDYQSRIWHCPFCSQRNPFPRSIADANLPAELFPTYTTVEYSSSSSLFHPPAFVFVIDVSTSQDELCSLKNEILLLLHHLPDTALVALITFDSMVYLHDIQFSHCSRIVLLHGEHQFSSDQIRQFLNISRPHQLHTGQTQPVPKQGFLVPISECEFSITAAIEDIHSTYNFRSGSRPPRSTGAAISAAIGLLECCFVNAGSRIMVFTSGPATLGPGLVVDSDFRQSMRTHNDIFNGQARHHSKSCSFYRQIAKRLSDASVVLDLFACSLDQVGVAELREPIERSGGFVVLAESFESDQFRKCIRHLFKHDDDEGFLKMNFDATIEIVTTNDVKISGALGPCMSLRKKNASVSETEVGQGGTCVWKLNTLTDRTCIAFFFQVSDKQTIQPSSAFMVQFITRYRQGNMGLRKRVTTAARRWVANHSTDIAAGFDQEAAASVMARLAILRAETCHARDVVRWLDDTLIRFTSKFGDYVPEDPSSFRLSSNFSLYPQFMFHLRRSQFIDVSNTTPDETAYFRLMLNREGVVGSLIMIQPTLFQYSFDGPPIPVLLDIRSICPDSILLFDSFFLVVIHYGSKIAQWKKLGYDKDPNHENFRKLLEAPELDAEQLVAERVPVPKVIRCDQHSSQARFLLAKLNPSVTQNSTYTDGSDIIFTDDLSLQVFLDQLQILAVQG