Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92905.t1 | XP_003614096.1 | 97.5 | 400 | 7 | 1 | 1 | 400 | 1 | 397 | 2.30E-214 | 754.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92905.t1 | Q9ZQ89 | 77.9 | 403 | 81 | 3 | 1 | 400 | 1 | 398 | 7.2e-172 | 604.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92905.t1 | G7JY00 | 97.5 | 400 | 7 | 1 | 1 | 400 | 1 | 397 | 1.7e-214 | 754.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054684 | MS.gene92905 | 0.813357 | 2.67E-51 | -1.69E-46 |
| MS.gene055150 | MS.gene92905 | 0.822449 | 2.36E-53 | -1.69E-46 |
| MS.gene05878 | MS.gene92905 | 0.816569 | 5.17E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene92905 | 0.826324 | 2.89E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92905.t1 | MTR_5g044710 | 97.500 | 400 | 7 | 1 | 1 | 400 | 1 | 397 | 0.0 | 793 |
| MS.gene92905.t1 | MTR_5g045530 | 88.337 | 403 | 42 | 3 | 1 | 400 | 1 | 401 | 0.0 | 665 |
| MS.gene92905.t1 | MTR_5g045520 | 82.469 | 405 | 62 | 3 | 1 | 400 | 27 | 427 | 0.0 | 647 |
| MS.gene92905.t1 | MTR_5g045520 | 82.469 | 405 | 62 | 3 | 1 | 400 | 1 | 401 | 0.0 | 646 |
| MS.gene92905.t1 | MTR_5g044710 | 97.538 | 325 | 5 | 1 | 76 | 400 | 2 | 323 | 0.0 | 639 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92905.t1 | AT2G03530 | 77.916 | 403 | 81 | 3 | 1 | 400 | 1 | 398 | 0.0 | 619 |
| MS.gene92905.t1 | AT2G03530 | 77.916 | 403 | 81 | 3 | 1 | 400 | 1 | 398 | 0.0 | 619 |
| MS.gene92905.t1 | AT2G03590 | 76.750 | 400 | 83 | 2 | 1 | 400 | 1 | 390 | 0.0 | 607 |
| MS.gene92905.t1 | AT2G03590 | 76.750 | 400 | 83 | 2 | 1 | 400 | 1 | 390 | 0.0 | 607 |
| MS.gene92905.t1 | AT2G03530 | 77.690 | 381 | 77 | 3 | 1 | 378 | 1 | 376 | 0.0 | 585 |
| MS.gene92905.t1 | AT2G03520 | 68.889 | 405 | 117 | 3 | 1 | 400 | 1 | 401 | 0.0 | 542 |
| MS.gene92905.t1 | AT1G26440 | 67.726 | 409 | 115 | 4 | 1 | 400 | 9 | 409 | 0.0 | 531 |
| MS.gene92905.t1 | AT1G26440 | 67.726 | 409 | 115 | 4 | 1 | 400 | 9 | 409 | 0.0 | 531 |
| MS.gene92905.t1 | AT2G03530 | 77.358 | 318 | 67 | 2 | 83 | 400 | 1 | 313 | 2.69e-169 | 476 |
| MS.gene92905.t1 | AT2G03530 | 77.358 | 318 | 67 | 2 | 83 | 400 | 1 | 313 | 2.69e-169 | 476 |
| MS.gene92905.t1 | AT1G26440 | 61.520 | 408 | 106 | 5 | 1 | 400 | 9 | 373 | 4.58e-164 | 465 |
| MS.gene92905.t1 | AT1G26440 | 61.369 | 409 | 106 | 5 | 1 | 400 | 9 | 374 | 6.74e-164 | 465 |
| MS.gene92905.t1 | AT1G26440 | 67.781 | 329 | 94 | 2 | 76 | 400 | 16 | 336 | 9.89e-154 | 437 |
| MS.gene92905.t1 | AT1G26440 | 67.781 | 329 | 94 | 2 | 76 | 400 | 16 | 336 | 9.89e-154 | 437 |
| MS.gene92905.t1 | AT2G03600 | 63.450 | 342 | 102 | 5 | 1 | 336 | 1 | 325 | 3.55e-148 | 424 |
| MS.gene92905.t1 | AT2G03600 | 62.130 | 338 | 105 | 4 | 1 | 336 | 1 | 317 | 3.88e-143 | 410 |
| MS.gene92905.t1 | AT1G26440 | 55.941 | 404 | 109 | 5 | 1 | 400 | 9 | 347 | 1.47e-136 | 394 |
| MS.gene92905.t1 | AT2G03600 | 70.000 | 270 | 67 | 2 | 1 | 270 | 1 | 256 | 1.78e-133 | 383 |
| MS.gene92905.t1 | AT2G03600 | 70.000 | 270 | 67 | 2 | 1 | 270 | 1 | 256 | 1.78e-133 | 383 |
| MS.gene92905.t1 | AT1G26440 | 59.878 | 329 | 85 | 3 | 76 | 400 | 16 | 301 | 1.93e-128 | 372 |
| MS.gene92905.t1 | AT2G03600 | 64.828 | 290 | 65 | 3 | 1 | 267 | 1 | 276 | 8.42e-128 | 369 |
| MS.gene92905.t1 | AT2G03600 | 66.489 | 188 | 49 | 2 | 83 | 270 | 1 | 174 | 1.14e-79 | 243 |
Find 88 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCACTTGTGAGCACTTTC+TGG | 0.038144 | 5.1:+33093700 | MS.gene92905:CDS |
| ATCATCATTGAAGGCTTATT+TGG | 0.095179 | 5.1:+33093400 | MS.gene92905:CDS |
| TGGGAATGGCCTTCAATTTA+TGG | 0.121139 | 5.1:+33093475 | MS.gene92905:CDS |
| TAAGCCTTCAATGATGATTT+TGG | 0.158866 | 5.1:-33093395 | None:intergenic |
| GCTGGTTTCCTTGTTGTTCT+TGG | 0.192853 | 5.1:+33089908 | MS.gene92905:CDS |
| AGGCAGTATAAACACTTAAA+TGG | 0.211882 | 5.1:-33093292 | None:intergenic |
| GCTGGTCTACTTTGTGGATT+TGG | 0.221208 | 5.1:+33093455 | MS.gene92905:CDS |
| CTGGTTTCCTTGTTGTTCTT+GGG | 0.222511 | 5.1:+33089909 | MS.gene92905:CDS |
| GGAATATCGACTTGCCTTAA+TGG | 0.249356 | 5.1:-33092889 | None:intergenic |
| GCTTTCACCTTTGGTCAAAT+TGG | 0.256882 | 5.1:+33090035 | MS.gene92905:CDS |
| GTTATCATTGCTTTCACCTT+TGG | 0.272469 | 5.1:+33090026 | MS.gene92905:CDS |
| GCAGTGCTCATGGCATCATC+TGG | 0.290022 | 5.1:+33093813 | MS.gene92905:CDS |
| GCCAGCTGTGATGACTTTAT+TGG | 0.290683 | 5.1:+33089938 | MS.gene92905:CDS |
| TTAGCTATAACTTTCTTTGC+AGG | 0.305190 | 5.1:+33093191 | MS.gene92905:CDS |
| CTGGTCTACTTTGTGGATTT+GGG | 0.310127 | 5.1:+33093456 | MS.gene92905:CDS |
| TGAAGGCTTATTTGGGAGAT+TGG | 0.323288 | 5.1:+33093408 | MS.gene92905:CDS |
| GGCAGTATAAACACTTAAAT+GGG | 0.325531 | 5.1:-33093291 | None:intergenic |
| TCCACTTGTGAGCACTTTCT+GGG | 0.325696 | 5.1:+33093701 | MS.gene92905:CDS |
| TCAAGTATAACTGTTGTTAT+AGG | 0.331374 | 5.1:+33092145 | MS.gene92905:CDS |
| CCTTGTTGTTCTTGGGGACA+TGG | 0.348148 | 5.1:+33089916 | MS.gene92905:CDS |
| GGGAATGGCCTTCAATTTAT+GGG | 0.348344 | 5.1:+33093476 | MS.gene92905:CDS |
| TTCTATTTGCAATGGCTGGT+GGG | 0.362399 | 5.1:+33092044 | MS.gene92905:CDS |
| AAACACTGCAGTTCCTGCTT+TGG | 0.374306 | 5.1:-33092841 | None:intergenic |
| CAGTGGAACACTTTAGATAA+AGG | 0.378993 | 5.1:+33093263 | MS.gene92905:CDS |
| GGAAACCAGCATGCATACTA+TGG | 0.384971 | 5.1:-33089895 | None:intergenic |
| GATTCAAAGGATTTAGAGAA+TGG | 0.387178 | 5.1:+33092804 | MS.gene92905:CDS |
| AGTGGAACACTTTAGATAAA+GGG | 0.388576 | 5.1:+33093264 | MS.gene92905:CDS |
| TCATCATTGAAGGCTTATTT+GGG | 0.389547 | 5.1:+33093401 | MS.gene92905:CDS |
| TTGTTGGCTGGTCTACTTTG+TGG | 0.391876 | 5.1:+33093449 | MS.gene92905:CDS |
| GAAAGTTGAGACAAGAAGTT+AGG | 0.396418 | 5.1:-33090068 | None:intergenic |
| AGAGGTTGGGCATTGTTGGC+TGG | 0.396797 | 5.1:+33093437 | MS.gene92905:CDS |
| CTTCTTGTCTCAACTTTCTC+AGG | 0.400214 | 5.1:+33090073 | MS.gene92905:CDS |
| TGGTAGAGGTTGGGCATTGT+TGG | 0.400672 | 5.1:+33093433 | MS.gene92905:CDS |
| AGTTCAAGACAGGGTGATAA+AGG | 0.402264 | 5.1:-33093370 | None:intergenic |
| TCTGTTCTATTTGCAATGGC+TGG | 0.404500 | 5.1:+33092040 | MS.gene92905:CDS |
| TTAAACCATTTGCAGGTGTT+TGG | 0.421342 | 5.1:+33093149 | MS.gene92905:intron |
| CTACTTTGTGGATTTGGGAA+TGG | 0.422579 | 5.1:+33093461 | MS.gene92905:CDS |
| TTGGGAGATTGGAATGGTAG+AGG | 0.433035 | 5.1:+33093419 | MS.gene92905:CDS |
| TTTGGAAAGAGCACTTTCAT+TGG | 0.435170 | 5.1:+33093167 | MS.gene92905:CDS |
| CTTACCAAAATCATCATTGA+AGG | 0.436598 | 5.1:+33093391 | MS.gene92905:CDS |
| TTTGTCCACTCAGTATGCTT+GGG | 0.439898 | 5.1:+33092087 | MS.gene92905:CDS |
| ATTTGTCCACTCAGTATGCT+TGG | 0.448183 | 5.1:+33092086 | MS.gene92905:CDS |
| GGTGGGGTTGTCCTTAGCAT+TGG | 0.454459 | 5.1:+33092061 | MS.gene92905:CDS |
| CTACACCATCACTAATCTCT+TGG | 0.456636 | 5.1:+33089998 | MS.gene92905:CDS |
| AGTGATGGTGTAGTCAAGAT+AGG | 0.456695 | 5.1:-33089988 | None:intergenic |
| AGGAGAACATATACATTGCT+TGG | 0.456969 | 5.1:+33093759 | MS.gene92905:CDS |
| GCCTTCTGTTCTATTTGCAA+TGG | 0.461913 | 5.1:+33092036 | MS.gene92905:CDS |
| GTTCTATTTGCAATGGCTGG+TGG | 0.473832 | 5.1:+33092043 | MS.gene92905:CDS |
| AATGTATATGGTGGAGAGCA+AGG | 0.477899 | 5.1:+33089866 | None:intergenic |
| GAAGGTGATGTTTAGAATGA+TGG | 0.478524 | 5.1:-33093348 | None:intergenic |
| GAGATTGGAATGGTAGAGGT+TGG | 0.480321 | 5.1:+33093423 | MS.gene92905:CDS |
| TGCAGCTGTCGCAGTGCTCA+TGG | 0.495704 | 5.1:+33093803 | MS.gene92905:CDS |
| AGATTGGAATGGTAGAGGTT+GGG | 0.498339 | 5.1:+33093424 | MS.gene92905:CDS |
| TCCAATAAAGTCATCACAGC+TGG | 0.498538 | 5.1:-33089939 | None:intergenic |
| TGGTTTCCTTGTTGTTCTTG+GGG | 0.501836 | 5.1:+33089910 | MS.gene92905:CDS |
| CTTGTCCACCCATAAATTGA+AGG | 0.504503 | 5.1:-33093484 | None:intergenic |
| AATATAAACAGATGATTCAA+AGG | 0.505153 | 5.1:+33092791 | MS.gene92905:intron |
| TTTGTTGCTAAATTGAATGC+TGG | 0.505932 | 5.1:-33093236 | None:intergenic |
| TTTATGGGTGGACAAGCTGC+TGG | 0.509933 | 5.1:+33093491 | MS.gene92905:CDS |
| TCTATTTGCAATGGCTGGTG+GGG | 0.519530 | 5.1:+33092045 | MS.gene92905:CDS |
| GGAGAACATATACATTGCTT+GGG | 0.522179 | 5.1:+33093760 | MS.gene92905:CDS |
| GCTTATTTGGGAGATTGGAA+TGG | 0.541985 | 5.1:+33093413 | MS.gene92905:CDS |
| ATCTAATACTGCTGATAACA+AGG | 0.543347 | 5.1:+33092384 | MS.gene92905:CDS |
| CCCCAGAAAGTGCTCACAAG+TGG | 0.548827 | 5.1:-33093702 | None:intergenic |
| CTTTATCTAAAGTGTTCCAC+TGG | 0.550283 | 5.1:-33093262 | None:intergenic |
| CAGTGCTCATGGCATCATCT+GGG | 0.551445 | 5.1:+33093814 | MS.gene92905:CDS |
| GCCATTGCAAATAGAACAGA+AGG | 0.555972 | 5.1:-33092037 | None:intergenic |
| AGTGCAAACAAAGCCAAAGC+AGG | 0.564487 | 5.1:+33092828 | MS.gene92905:CDS |
| CTGTGATGACTTTATTGGAA+AGG | 0.567287 | 5.1:+33089943 | MS.gene92905:CDS |
| CCACTTGTGAGCACTTTCTG+GGG | 0.568469 | 5.1:+33093702 | MS.gene92905:CDS |
| TGGACAAATTTCCAATGCTA+AGG | 0.572809 | 5.1:-33092072 | None:intergenic |
| ATGTATATGGTGGAGAGCAA+GGG | 0.579654 | 5.1:+33089867 | MS.gene92905:CDS |
| ATCAGTGCCAATTTGACCAA+AGG | 0.592220 | 5.1:-33090042 | None:intergenic |
| GTGGAACACTTTAGATAAAG+GGG | 0.598850 | 5.1:+33093265 | MS.gene92905:CDS |
| CAAGACAGGGTGATAAAGGA+AGG | 0.599842 | 5.1:-33093366 | None:intergenic |
| AGGTGCCATAGTATGCATGC+TGG | 0.613318 | 5.1:+33089890 | MS.gene92905:CDS |
| GCGAGTATAGAAAATCATCA+AGG | 0.624685 | 5.1:+33093739 | MS.gene92905:CDS |
| AGCAGCCAAGAGATTAGTGA+TGG | 0.628687 | 5.1:-33090003 | None:intergenic |
| AATGGCCTTCAATTTATGGG+TGG | 0.631921 | 5.1:+33093479 | MS.gene92905:CDS |
| TGATAACAAGGCTAAGCTCA+AGG | 0.632197 | 5.1:+33092396 | MS.gene92905:CDS |
| ATGACTTTATTGGAAAGGAG+AGG | 0.632269 | 5.1:+33089948 | MS.gene92905:CDS |
| CCATGTCCCCAAGAACAACA+AGG | 0.634994 | 5.1:-33089916 | None:intergenic |
| ATTTAGCAACAAATGACCAG+TGG | 0.636828 | 5.1:+33093246 | MS.gene92905:CDS |
| TATATGGTGGAGAGCAAGGG+AGG | 0.646098 | 5.1:+33089870 | MS.gene92905:CDS |
| ACTTTGAATGAAGAAAGTAA+AGG | 0.657392 | 5.1:+33092710 | MS.gene92905:CDS |
| TAGTCAAGATAGGTGTGCTG+AGG | 0.663042 | 5.1:-33089978 | None:intergenic |
| GCAGTATAAACACTTAAATG+GGG | 0.664993 | 5.1:-33093290 | None:intergenic |
| AAAAGCCCAAGCATACTGAG+TGG | 0.720310 | 5.1:-33092092 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAAAAAAATATGCTT+TGG | - | chr5.1:33091573-33091592 | None:intergenic | 10.0% |
| !! | ATATTAAAAATATTAATGAC+TGG | - | chr5.1:33090856-33090875 | None:intergenic | 10.0% |
| !! | TATATACAAACATAAATAAT+AGG | + | chr5.1:33090191-33090210 | MS.gene92905:intron | 10.0% |
| !! | TATTAAAAAAAATATGCTTT+GGG | - | chr5.1:33091572-33091591 | None:intergenic | 10.0% |
| !!! | CTAATTTTCATTTTTTTATT+GGG | - | chr5.1:33091102-33091121 | None:intergenic | 10.0% |
| !!! | TAAAATATTTTAATACAACT+AGG | - | chr5.1:33090699-33090718 | None:intergenic | 10.0% |
| !!! | TAAGAAAATGTTTATTTTTA+GGG | + | chr5.1:33090936-33090955 | MS.gene92905:intron | 10.0% |
| !!! | TCTAATTTTCATTTTTTTAT+TGG | - | chr5.1:33091103-33091122 | None:intergenic | 10.0% |
| !!! | TGACAAAAAATTTAAATTTT+AGG | - | chr5.1:33091805-33091824 | None:intergenic | 10.0% |
| !!! | TTAAGAAAATGTTTATTTTT+AGG | + | chr5.1:33090935-33090954 | MS.gene92905:intron | 10.0% |
| !! | CATCTGTTTATATTAATAAA+GGG | - | chr5.1:33092785-33092804 | None:intergenic | 15.0% |
| !! | TCATCTGTTTATATTAATAA+AGG | - | chr5.1:33092786-33092805 | None:intergenic | 15.0% |
| !!! | ATATTTTAAACGATAAAAAG+AGG | + | chr5.1:33090711-33090730 | MS.gene92905:intron | 15.0% |
| !!! | ATTTTGTTCTAAATTACTTT+TGG | + | chr5.1:33092565-33092584 | MS.gene92905:intron | 15.0% |
| !!! | ATTTTTTGGCTTAATAAATT+TGG | - | chr5.1:33090400-33090419 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAGTTTTAAATTG+TGG | - | chr5.1:33093086-33093105 | None:intergenic | 15.0% |
| !!! | TTTTCTATGTTAATTCTAAA+TGG | + | chr5.1:33090113-33090132 | MS.gene92905:intron | 15.0% |
| !! | AAAAAACACAAACTCTTATT+TGG | - | chr5.1:33090369-33090388 | None:intergenic | 20.0% |
| !! | AAAAACAGAAGAAAAAATCT+AGG | + | chr5.1:33091384-33091403 | MS.gene92905:intron | 20.0% |
| !! | AAAGTAAAGGTAACAATATT+TGG | + | chr5.1:33092723-33092742 | MS.gene92905:intron | 20.0% |
| !! | AATATAAACAGATGATTCAA+AGG | + | chr5.1:33092791-33092810 | MS.gene92905:intron | 20.0% |
| !! | TAGAAAAATAAAGACAAACA+CGG | + | chr5.1:33093012-33093031 | MS.gene92905:intron | 20.0% |
| !!! | ATGATTGTAGTTTTAAACTT+CGG | - | chr5.1:33092963-33092982 | None:intergenic | 20.0% |
| !!! | ATTTTTATTTGTGATTGTCA+GGG | - | chr5.1:33091871-33091890 | None:intergenic | 20.0% |
| !!! | CACAACATTGAATTATTTTT+TGG | + | chr5.1:33092276-33092295 | MS.gene92905:CDS | 20.0% |
| !!! | CCAAAATTTGAATTTTTTGT+CGG | + | chr5.1:33091700-33091719 | MS.gene92905:intron | 20.0% |
| !!! | CTAAATTACTTTTGGTTAAT+TGG | + | chr5.1:33092573-33092592 | MS.gene92905:intron | 20.0% |
| !!! | TATTTCTCTTGTAAGTTTTA+AGG | + | chr5.1:33090873-33090892 | MS.gene92905:intron | 20.0% |
| !!! | TTGATGATATTTTTAGTCAT+GGG | + | chr5.1:33090158-33090177 | MS.gene92905:intron | 20.0% |
| ! | AAAAAAATCTGTTGCATTCT+TGG | + | chr5.1:33091330-33091349 | MS.gene92905:intron | 25.0% |
| ! | AAGGTTCATACAAATACATT+TGG | + | chr5.1:33090892-33090911 | MS.gene92905:intron | 25.0% |
| ! | AATTTGAGCCAAAAAATAGT+TGG | - | chr5.1:33090342-33090361 | None:intergenic | 25.0% |
| ! | ACATAATTTAATCGATATGG+TGG | - | chr5.1:33090802-33090821 | None:intergenic | 25.0% |
| ! | ACTTTGAATGAAGAAAGTAA+AGG | + | chr5.1:33092710-33092729 | MS.gene92905:CDS | 25.0% |
| ! | AGAGACTGAAAAATAAAAGA+AGG | - | chr5.1:33093315-33093334 | None:intergenic | 25.0% |
| ! | AGTCCTTAAAAACTAAAACA+GGG | + | chr5.1:33091824-33091843 | MS.gene92905:intron | 25.0% |
| ! | ATAGCTACTACTAATATGAT+TGG | - | chr5.1:33092482-33092501 | None:intergenic | 25.0% |
| ! | ATGAAAAACATTCAACTTGT+AGG | + | chr5.1:33091122-33091141 | MS.gene92905:intron | 25.0% |
| ! | CATAGTTCCTAAAAAATGAT+TGG | - | chr5.1:33091507-33091526 | None:intergenic | 25.0% |
| ! | GTGACATAATTTAATCGATA+TGG | - | chr5.1:33090805-33090824 | None:intergenic | 25.0% |
| ! | TAATAAGGCAAACAATAAGA+CGG | + | chr5.1:33091239-33091258 | MS.gene92905:intron | 25.0% |
| ! | TCAAGTATAACTGTTGTTAT+AGG | + | chr5.1:33092145-33092164 | MS.gene92905:CDS | 25.0% |
| ! | TGAGAAAAAAAGATCCATTA+AGG | + | chr5.1:33092875-33092894 | MS.gene92905:CDS | 25.0% |
| ! | TGTTAATTCTAAATGGAAAG+AGG | + | chr5.1:33090120-33090139 | MS.gene92905:intron | 25.0% |
| ! | TTCATACAAATACATTTGGA+CGG | + | chr5.1:33090896-33090915 | MS.gene92905:intron | 25.0% |
| ! | TTGAAAAATGCGAAAGAAAT+GGG | - | chr5.1:33090660-33090679 | None:intergenic | 25.0% |
| ! | TTTGCATTCAAACTCTTATT+TGG | - | chr5.1:33090549-33090568 | None:intergenic | 25.0% |
| !! | AATCATTTCTGATTTTGTCT+TGG | + | chr5.1:33092616-33092635 | MS.gene92905:intron | 25.0% |
| !! | AATCTCTCATGCTTTTAATA+AGG | + | chr5.1:33091224-33091243 | MS.gene92905:intron | 25.0% |
| !! | CCGACAAAAAATTCAAATTT+TGG | - | chr5.1:33091703-33091722 | None:intergenic | 25.0% |
| !! | TATTAATAAAGGGCATGAAT+AGG | - | chr5.1:33092775-33092794 | None:intergenic | 25.0% |
| !! | TTTTATTCAGATACTCCATT+TGG | + | chr5.1:33093612-33093631 | MS.gene92905:intron | 25.0% |
| !!! | AAAATCTGTTATTTTTCCAG+GGG | + | chr5.1:33092674-33092693 | MS.gene92905:intron | 25.0% |
| !!! | AGTGCCTTTTTAAGTATTTT+GGG | + | chr5.1:33091778-33091797 | MS.gene92905:intron | 25.0% |
| !!! | ATTCCCTGTTTTAGTTTTTA+AGG | - | chr5.1:33091727-33091746 | None:intergenic | 25.0% |
| !!! | CAAAATCTGTTATTTTTCCA+GGG | + | chr5.1:33092673-33092692 | MS.gene92905:intron | 25.0% |
| !!! | CAAACTCTTATTTGGTTTTT+AGG | - | chr5.1:33090541-33090560 | None:intergenic | 25.0% |
| !!! | CATTTTTATTTGTGATTGTC+AGG | - | chr5.1:33091872-33091891 | None:intergenic | 25.0% |
| !!! | CTTGATGATATTTTTAGTCA+TGG | + | chr5.1:33090157-33090176 | MS.gene92905:intron | 25.0% |
| !!! | GCTTTCTTTACACAATTTTT+TGG | - | chr5.1:33090414-33090433 | None:intergenic | 25.0% |
| !!! | TAGTGCCTTTTTAAGTATTT+TGG | + | chr5.1:33091777-33091796 | MS.gene92905:intron | 25.0% |
| !!! | TCTTATTTGGTTTTTAGGAA+GGG | - | chr5.1:33090536-33090555 | None:intergenic | 25.0% |
| AAAAACATTCAACTTGTAGG+AGG | + | chr5.1:33091125-33091144 | MS.gene92905:intron | 30.0% | |
| AACACAGAGAAAAAATAAGC+TGG | + | chr5.1:33090574-33090593 | MS.gene92905:intron | 30.0% | |
| AATAAGGCAAACAATAAGAC+GGG | + | chr5.1:33091240-33091259 | MS.gene92905:intron | 30.0% | |
| AATTCAGCAGAATTCAATAC+TGG | - | chr5.1:33092233-33092252 | None:intergenic | 30.0% | |
| ACGGAAAAACGATAAATACA+AGG | + | chr5.1:33090444-33090463 | MS.gene92905:intron | 30.0% | |
| ACGTATATTTCGCTATTTGA+AGG | + | chr5.1:33093657-33093676 | MS.gene92905:intron | 30.0% | |
| AGGCAGTATAAACACTTAAA+TGG | - | chr5.1:33093295-33093314 | None:intergenic | 30.0% | |
| AGTGGAACACTTTAGATAAA+GGG | + | chr5.1:33093264-33093283 | MS.gene92905:CDS | 30.0% | |
| ATCATCATTGAAGGCTTATT+TGG | + | chr5.1:33093400-33093419 | MS.gene92905:CDS | 30.0% | |
| ATCTAATACTGCTGATAACA+AGG | + | chr5.1:33092384-33092403 | MS.gene92905:CDS | 30.0% | |
| CAGTCCTTAAAAACTAAAAC+AGG | + | chr5.1:33091823-33091842 | MS.gene92905:intron | 30.0% | |
| CTTACCAAAATCATCATTGA+AGG | + | chr5.1:33093391-33093410 | MS.gene92905:CDS | 30.0% | |
| GATTCAAAGGATTTAGAGAA+TGG | + | chr5.1:33092804-33092823 | MS.gene92905:CDS | 30.0% | |
| GCAGTATAAACACTTAAATG+GGG | - | chr5.1:33093293-33093312 | None:intergenic | 30.0% | |
| GGCAGTATAAACACTTAAAT+GGG | - | chr5.1:33093294-33093313 | None:intergenic | 30.0% | |
| GGTCCTTAAAAACTAAAACA+GGG | + | chr5.1:33091721-33091740 | MS.gene92905:intron | 30.0% | |
| GTTGAAAAATGCGAAAGAAA+TGG | - | chr5.1:33090661-33090680 | None:intergenic | 30.0% | |
| TACAAGGTACAGTATATATG+CGG | + | chr5.1:33090460-33090479 | MS.gene92905:intron | 30.0% | |
| TCATCATTGAAGGCTTATTT+GGG | + | chr5.1:33093401-33093420 | MS.gene92905:CDS | 30.0% | |
| TTAGCTATAACTTTCTTTGC+AGG | + | chr5.1:33093191-33093210 | MS.gene92905:CDS | 30.0% | |
| TTCCCTTCTTCTATCTATAT+GGG | + | chr5.1:33091545-33091564 | MS.gene92905:intron | 30.0% | |
| TTTGTTGCTAAATTGAATGC+TGG | - | chr5.1:33093239-33093258 | None:intergenic | 30.0% | |
| ! | ACATAACTTTTCTTTCAGTG+AGG | + | chr5.1:33093570-33093589 | MS.gene92905:intron | 30.0% |
| ! | ATAACTTTTCTTTCAGTGAG+GGG | + | chr5.1:33093572-33093591 | MS.gene92905:intron | 30.0% |
| ! | CATAACTTTTCTTTCAGTGA+GGG | + | chr5.1:33093571-33093590 | MS.gene92905:intron | 30.0% |
| ! | CCTGGAAAAATAACAGATTT+TGG | - | chr5.1:33092675-33092694 | None:intergenic | 30.0% |
| ! | TAAGCCTTCAATGATGATTT+TGG | - | chr5.1:33093398-33093417 | None:intergenic | 30.0% |
| ! | TTTTCCACTTTCTTCTTTGT+GGG | + | chr5.1:33090618-33090637 | MS.gene92905:intron | 30.0% |
| ! | TTTTTCCACTTTCTTCTTTG+TGG | + | chr5.1:33090617-33090636 | MS.gene92905:intron | 30.0% |
| !! | ATTTTGGTAAGTTCAAGACA+GGG | - | chr5.1:33093382-33093401 | None:intergenic | 30.0% |
| !! | GGCCAATAAATTTGTTAAGA+CGG | + | chr5.1:33091845-33091864 | MS.gene92905:intron | 30.0% |
| !!! | AAATCTGTTATTTTTCCAGG+GGG | + | chr5.1:33092675-33092694 | MS.gene92905:intron | 30.0% |
| !!! | CCAAAATCTGTTATTTTTCC+AGG | + | chr5.1:33092672-33092691 | MS.gene92905:intron | 30.0% |
| !!! | CTCTTATTTGGTTTTTAGGA+AGG | - | chr5.1:33090537-33090556 | None:intergenic | 30.0% |
| !!! | GTGCCTTTTTAAGTATTTTG+GGG | + | chr5.1:33091779-33091798 | MS.gene92905:intron | 30.0% |
| !!! | TCACTCTCCAATCATTTTTT+AGG | + | chr5.1:33091497-33091516 | MS.gene92905:intron | 30.0% |
| !!! | TCCTTCATCCAACTATTTTT+TGG | + | chr5.1:33090331-33090350 | MS.gene92905:intron | 30.0% |
| !!! | TTTTTGGTTGCAGTTTGTTT+AGG | + | chr5.1:33092346-33092365 | MS.gene92905:CDS | 30.0% |
| AAAAAACTGAGAGTGGAGTA+TGG | + | chr5.1:33091282-33091301 | MS.gene92905:intron | 35.0% | |
| AAAAACTGAGAGTGGAGTAT+GGG | + | chr5.1:33091283-33091302 | MS.gene92905:intron | 35.0% | |
| AACCTTGTTCAATTTGTCAC+AGG | + | chr5.1:33092253-33092272 | MS.gene92905:intron | 35.0% | |
| AGGAGAACATATACATTGCT+TGG | + | chr5.1:33093759-33093778 | MS.gene92905:CDS | 35.0% | |
| AGGCCCCAAAATACTTAAAA+AGG | - | chr5.1:33091785-33091804 | None:intergenic | 35.0% | |
| ATAAGGCAAACAATAAGACG+GGG | + | chr5.1:33091241-33091260 | MS.gene92905:intron | 35.0% | |
| ATGACTTTATTGGAAAGGAG+AGG | + | chr5.1:33089948-33089967 | MS.gene92905:CDS | 35.0% | |
| ATGTAGCAAAAAACTGAGAG+TGG | + | chr5.1:33091275-33091294 | MS.gene92905:intron | 35.0% | |
| ATTTAGCAACAAATGACCAG+TGG | + | chr5.1:33093246-33093265 | MS.gene92905:CDS | 35.0% | |
| CAACCTCTATCGTATATATG+TGG | + | chr5.1:33090498-33090517 | MS.gene92905:intron | 35.0% | |
| CACTTAGTGAAATTGACTAG+AGG | - | chr5.1:33090775-33090794 | None:intergenic | 35.0% | |
| CAGCTTATAATAGCAAAGAG+AGG | + | chr5.1:33090283-33090302 | MS.gene92905:intron | 35.0% | |
| CAGTGGAACACTTTAGATAA+AGG | + | chr5.1:33093263-33093282 | MS.gene92905:CDS | 35.0% | |
| CGGTCCTTAAAAACTAAAAC+AGG | + | chr5.1:33091720-33091739 | MS.gene92905:intron | 35.0% | |
| CGTTCGTGAAAATTTCAATG+AGG | - | chr5.1:33092913-33092932 | None:intergenic | 35.0% | |
| CTGCAAATGGTTTAACACAA+AGG | - | chr5.1:33093144-33093163 | None:intergenic | 35.0% | |
| CTGTGATGACTTTATTGGAA+AGG | + | chr5.1:33089943-33089962 | MS.gene92905:CDS | 35.0% | |
| CTTCCCTTCTTCTATCTATA+TGG | + | chr5.1:33091544-33091563 | MS.gene92905:intron | 35.0% | |
| CTTTGTGTTAAACCATTTGC+AGG | + | chr5.1:33093142-33093161 | MS.gene92905:intron | 35.0% | |
| GAAAGTTGAGACAAGAAGTT+AGG | - | chr5.1:33090071-33090090 | None:intergenic | 35.0% | |
| GATAAATTGCTCTGCTTCAT+TGG | + | chr5.1:33091642-33091661 | MS.gene92905:intron | 35.0% | |
| GCCAAAAAATAGTTGGATGA+AGG | - | chr5.1:33090335-33090354 | None:intergenic | 35.0% | |
| GCGAGTATAGAAAATCATCA+AGG | + | chr5.1:33093739-33093758 | MS.gene92905:CDS | 35.0% | |
| GGAGAACATATACATTGCTT+GGG | + | chr5.1:33093760-33093779 | MS.gene92905:CDS | 35.0% | |
| GGCCGTCTTAACAAATTTAT+TGG | - | chr5.1:33091850-33091869 | None:intergenic | 35.0% | |
| GTGGAACACTTTAGATAAAG+GGG | + | chr5.1:33093265-33093284 | MS.gene92905:CDS | 35.0% | |
| GTTATCATTGCTTTCACCTT+TGG | + | chr5.1:33090026-33090045 | MS.gene92905:CDS | 35.0% | |
| GTTCCACATATATACGATAG+AGG | - | chr5.1:33090504-33090523 | None:intergenic | 35.0% | |
| TCCCTTCTTCTATCTATATG+GGG | + | chr5.1:33091546-33091565 | MS.gene92905:intron | 35.0% | |
| TGCGTATATTGAAGTCCAAA+TGG | - | chr5.1:33093630-33093649 | None:intergenic | 35.0% | |
| TGGACAAATTTCCAATGCTA+AGG | - | chr5.1:33092075-33092094 | None:intergenic | 35.0% | |
| TTAAACCATTTGCAGGTGTT+TGG | + | chr5.1:33093149-33093168 | MS.gene92905:intron | 35.0% | |
| ! | AAAGAAAGCACAAACTTGGA+CGG | + | chr5.1:33090425-33090444 | MS.gene92905:intron | 35.0% |
| ! | AAAGCTGAGATTCTTTTTCC+AGG | + | chr5.1:33092313-33092332 | MS.gene92905:CDS | 35.0% |
| ! | CTTTATCTAAAGTGTTCCAC+TGG | - | chr5.1:33093265-33093284 | None:intergenic | 35.0% |
| ! | GAAGGTGATGTTTAGAATGA+TGG | - | chr5.1:33093351-33093370 | None:intergenic | 35.0% |
| ! | GAATGTGTGATTTTTGATGC+AGG | + | chr5.1:33092006-33092025 | MS.gene92905:intron | 35.0% |
| ! | GTGTAAAGAAAGCACAAACT+TGG | + | chr5.1:33090421-33090440 | MS.gene92905:intron | 35.0% |
| !! | GATTTTGGTAAGTTCAAGAC+AGG | - | chr5.1:33093383-33093402 | None:intergenic | 35.0% |
| !! | TTTGGAAAGAGCACTTTCAT+TGG | + | chr5.1:33093167-33093186 | MS.gene92905:CDS | 35.0% |
| !! | TTTTTAGGAAGGGAGTTTTG+AGG | - | chr5.1:33090526-33090545 | None:intergenic | 35.0% |
| !!! | TGGCCCTGTTTTAGTTTTTA+AGG | - | chr5.1:33091830-33091849 | None:intergenic | 35.0% |
| AAAACTGAGAGTGGAGTATG+GGG | + | chr5.1:33091284-33091303 | MS.gene92905:intron | 40.0% | |
| AACCACACACTCTGTAATCA+AGG | - | chr5.1:33091674-33091693 | None:intergenic | 40.0% | |
| AATGGCCTTCAATTTATGGG+TGG | + | chr5.1:33093479-33093498 | MS.gene92905:CDS | 40.0% | |
| AGATTGGAATGGTAGAGGTT+GGG | + | chr5.1:33093424-33093443 | MS.gene92905:CDS | 40.0% | |
| AGTAGATAAATTAGTCCCCC+TGG | - | chr5.1:33092693-33092712 | None:intergenic | 40.0% | |
| AGTTCAAGACAGGGTGATAA+AGG | - | chr5.1:33093373-33093392 | None:intergenic | 40.0% | |
| ATCAGTGCCAATTTGACCAA+AGG | - | chr5.1:33090045-33090064 | None:intergenic | 40.0% | |
| ATGACCCACAAAGAAGAAAG+TGG | - | chr5.1:33090625-33090644 | None:intergenic | 40.0% | |
| ATTACAGAGTGTGTGGTTGT+GGG | + | chr5.1:33091676-33091695 | MS.gene92905:intron | 40.0% | |
| ATTTGTCCACTCAGTATGCT+TGG | + | chr5.1:33092086-33092105 | MS.gene92905:CDS | 40.0% | |
| CTACACCATCACTAATCTCT+TGG | + | chr5.1:33089998-33090017 | MS.gene92905:CDS | 40.0% | |
| CTACTTTGTGGATTTGGGAA+TGG | + | chr5.1:33093461-33093480 | MS.gene92905:CDS | 40.0% | |
| CTGGTCTACTTTGTGGATTT+GGG | + | chr5.1:33093456-33093475 | MS.gene92905:CDS | 40.0% | |
| CTTCTTGTCTCAACTTTCTC+AGG | + | chr5.1:33090073-33090092 | MS.gene92905:CDS | 40.0% | |
| CTTGTCCACCCATAAATTGA+AGG | - | chr5.1:33093487-33093506 | None:intergenic | 40.0% | |
| GAAAGTGGAAAAACCTGTTC+TGG | - | chr5.1:33090610-33090629 | None:intergenic | 40.0% | |
| GCCATTGCAAATAGAACAGA+AGG | - | chr5.1:33092040-33092059 | None:intergenic | 40.0% | |
| GCCCCATATAGATAGAAGAA+GGG | - | chr5.1:33091550-33091569 | None:intergenic | 40.0% | |
| GCCTTCTGTTCTATTTGCAA+TGG | + | chr5.1:33092036-33092055 | MS.gene92905:CDS | 40.0% | |
| GCTTATTTGGGAGATTGGAA+TGG | + | chr5.1:33093413-33093432 | MS.gene92905:CDS | 40.0% | |
| GCTTTCACCTTTGGTCAAAT+TGG | + | chr5.1:33090035-33090054 | MS.gene92905:CDS | 40.0% | |
| GGGAATGGCCTTCAATTTAT+GGG | + | chr5.1:33093476-33093495 | MS.gene92905:CDS | 40.0% | |
| TAAATTGTGGTCTGCAACTG+CGG | - | chr5.1:33093073-33093092 | None:intergenic | 40.0% | |
| TCCAATAAAGTCATCACAGC+TGG | - | chr5.1:33089942-33089961 | None:intergenic | 40.0% | |
| TCTGTTCTATTTGCAATGGC+TGG | + | chr5.1:33092040-33092059 | MS.gene92905:CDS | 40.0% | |
| TCTTTCCAAACACCTGCAAA+TGG | - | chr5.1:33093157-33093176 | None:intergenic | 40.0% | |
| TGAAGGCTTATTTGGGAGAT+TGG | + | chr5.1:33093408-33093427 | MS.gene92905:CDS | 40.0% | |
| TGATAACAAGGCTAAGCTCA+AGG | + | chr5.1:33092396-33092415 | MS.gene92905:CDS | 40.0% | |
| TGCCTGTGACAAATTGAACA+AGG | - | chr5.1:33092258-33092277 | None:intergenic | 40.0% | |
| TGGGAATGGCCTTCAATTTA+TGG | + | chr5.1:33093475-33093494 | MS.gene92905:CDS | 40.0% | |
| TTCTATTTGCAATGGCTGGT+GGG | + | chr5.1:33092044-33092063 | MS.gene92905:CDS | 40.0% | |
| TTGTCTCAACTTTCTCAGGT+AGG | + | chr5.1:33090077-33090096 | MS.gene92905:intron | 40.0% | |
| TTTGTCCACTCAGTATGCTT+GGG | + | chr5.1:33092087-33092106 | MS.gene92905:CDS | 40.0% | |
| ! | AGTGATGGTGTAGTCAAGAT+AGG | - | chr5.1:33089991-33090010 | None:intergenic | 40.0% |
| ! | ATGTATATGGTGGAGAGCAA+GGG | + | chr5.1:33089867-33089886 | MS.gene92905:CDS | 40.0% |
| ! | GAGATTCTTTTTCCAGGAGT+TGG | + | chr5.1:33092319-33092338 | MS.gene92905:CDS | 40.0% |
| !! | AATGCGAAAGAAATGGGTTG+AGG | - | chr5.1:33090654-33090673 | None:intergenic | 40.0% |
| !! | CTGGTTTCCTTGTTGTTCTT+GGG | + | chr5.1:33089909-33089928 | MS.gene92905:CDS | 40.0% |
| !! | GGAATATCGACTTGCCTTAA+TGG | - | chr5.1:33092892-33092911 | None:intergenic | 40.0% |
| !! | TGGTTTCCTTGTTGTTCTTG+GGG | + | chr5.1:33089910-33089929 | MS.gene92905:CDS | 40.0% |
| AAAAGCCCAAGCATACTGAG+TGG | - | chr5.1:33092095-33092114 | None:intergenic | 45.0% | |
| AAACACTGCAGTTCCTGCTT+TGG | - | chr5.1:33092844-33092863 | None:intergenic | 45.0% | |
| AAACTGAGAGTGGAGTATGG+GGG | + | chr5.1:33091285-33091304 | MS.gene92905:intron | 45.0% | |
| ACCAAAAAGCAACCAACTCC+TGG | - | chr5.1:33092334-33092353 | None:intergenic | 45.0% | |
| AGCAGCCAAGAGATTAGTGA+TGG | - | chr5.1:33090006-33090025 | None:intergenic | 45.0% | |
| AGTGCAAACAAAGCCAAAGC+AGG | + | chr5.1:33092828-33092847 | MS.gene92905:CDS | 45.0% | |
| CAAGACAGGGTGATAAAGGA+AGG | - | chr5.1:33093369-33093388 | None:intergenic | 45.0% | |
| CTCCTTGATTACAGAGTGTG+TGG | + | chr5.1:33091669-33091688 | MS.gene92905:intron | 45.0% | |
| GAGATTGGAATGGTAGAGGT+TGG | + | chr5.1:33093423-33093442 | MS.gene92905:CDS | 45.0% | |
| GATTACAGAGTGTGTGGTTG+TGG | + | chr5.1:33091675-33091694 | MS.gene92905:intron | 45.0% | |
| GCCAGCTGTGATGACTTTAT+TGG | + | chr5.1:33089938-33089957 | MS.gene92905:CDS | 45.0% | |
| GGAAACCAGCATGCATACTA+TGG | - | chr5.1:33089898-33089917 | None:intergenic | 45.0% | |
| GGCCCCATATAGATAGAAGA+AGG | - | chr5.1:33091551-33091570 | None:intergenic | 45.0% | |
| GTTCTATTTGCAATGGCTGG+TGG | + | chr5.1:33092043-33092062 | MS.gene92905:CDS | 45.0% | |
| TAGTCAAGATAGGTGTGCTG+AGG | - | chr5.1:33089981-33090000 | None:intergenic | 45.0% | |
| TCCACTTGTGAGCACTTTCT+GGG | + | chr5.1:33093701-33093720 | MS.gene92905:CDS | 45.0% | |
| TCTATTTGCAATGGCTGGTG+GGG | + | chr5.1:33092045-33092064 | MS.gene92905:CDS | 45.0% | |
| TGGCAAAGAGAATCCAGAAC+AGG | + | chr5.1:33090594-33090613 | MS.gene92905:intron | 45.0% | |
| TTCCACTTGTGAGCACTTTC+TGG | + | chr5.1:33093700-33093719 | MS.gene92905:CDS | 45.0% | |
| TTGGGAGATTGGAATGGTAG+AGG | + | chr5.1:33093419-33093438 | MS.gene92905:CDS | 45.0% | |
| ! | CAGTATGCTTGGGCTTTTGT+TGG | + | chr5.1:33092097-33092116 | MS.gene92905:CDS | 45.0% |
| ! | GCTGGTCTACTTTGTGGATT+TGG | + | chr5.1:33093455-33093474 | MS.gene92905:CDS | 45.0% |
| !! | GCTGGTTTCCTTGTTGTTCT+TGG | + | chr5.1:33089908-33089927 | MS.gene92905:CDS | 45.0% |
| !! | TGAAGGAGTGTTGTTTGTGC+AGG | + | chr5.1:33093674-33093693 | MS.gene92905:intron | 45.0% |
| !! | TTGTTGGCTGGTCTACTTTG+TGG | + | chr5.1:33093449-33093468 | MS.gene92905:CDS | 45.0% |
| !!! | TCCAGGAGTTGGTTGCTTTT+TGG | + | chr5.1:33092330-33092349 | MS.gene92905:CDS | 45.0% |
| !!! | TTCTGGGGCGTTGTTTTGTT+CGG | + | chr5.1:33093717-33093736 | MS.gene92905:CDS | 45.0% |
| CAGTGCTCATGGCATCATCT+GGG | + | chr5.1:33093814-33093833 | MS.gene92905:CDS | 50.0% | |
| CCACTTGTGAGCACTTTCTG+GGG | + | chr5.1:33093702-33093721 | MS.gene92905:CDS | 50.0% | |
| CCATGTCCCCAAGAACAACA+AGG | - | chr5.1:33089919-33089938 | None:intergenic | 50.0% | |
| TGTGTTCAGACTGAGCAGTG+CGG | - | chr5.1:33091161-33091180 | None:intergenic | 50.0% | |
| TTTATGGGTGGACAAGCTGC+TGG | + | chr5.1:33093491-33093510 | MS.gene92905:CDS | 50.0% | |
| ! | AGGTGCCATAGTATGCATGC+TGG | + | chr5.1:33089890-33089909 | MS.gene92905:CDS | 50.0% |
| ! | TATATGGTGGAGAGCAAGGG+AGG | + | chr5.1:33089870-33089889 | MS.gene92905:CDS | 50.0% |
| ! | TGGTAGAGGTTGGGCATTGT+TGG | + | chr5.1:33093433-33093452 | MS.gene92905:CDS | 50.0% |
| !! | CCTTGTTGTTCTTGGGGACA+TGG | + | chr5.1:33089916-33089935 | MS.gene92905:CDS | 50.0% |
| GCAGTGCTCATGGCATCATC+TGG | + | chr5.1:33093813-33093832 | MS.gene92905:CDS | 55.0% | |
| GGTGGGGTTGTCCTTAGCAT+TGG | + | chr5.1:33092061-33092080 | MS.gene92905:CDS | 55.0% | |
| ! | AGAGGTTGGGCATTGTTGGC+TGG | + | chr5.1:33093437-33093456 | MS.gene92905:CDS | 55.0% |
| !! | CCCCAGAAAGTGCTCACAAG+TGG | - | chr5.1:33093705-33093724 | None:intergenic | 55.0% |
| TGCAGCTGTCGCAGTGCTCA+TGG | + | chr5.1:33093803-33093822 | MS.gene92905:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 33089867 | 33093848 | 33089867 | ID=MS.gene92905 |
| chr5.1 | mRNA | 33089867 | 33093848 | 33089867 | ID=MS.gene92905.t1;Parent=MS.gene92905 |
| chr5.1 | exon | 33089867 | 33090094 | 33089867 | ID=MS.gene92905.t1.exon1;Parent=MS.gene92905.t1 |
| chr5.1 | CDS | 33089867 | 33090094 | 33089867 | ID=cds.MS.gene92905.t1;Parent=MS.gene92905.t1 |
| chr5.1 | exon | 33092028 | 33092166 | 33092028 | ID=MS.gene92905.t1.exon2;Parent=MS.gene92905.t1 |
| chr5.1 | CDS | 33092028 | 33092166 | 33092028 | ID=cds.MS.gene92905.t1;Parent=MS.gene92905.t1 |
| chr5.1 | exon | 33092275 | 33092449 | 33092275 | ID=MS.gene92905.t1.exon3;Parent=MS.gene92905.t1 |
| chr5.1 | CDS | 33092275 | 33092449 | 33092275 | ID=cds.MS.gene92905.t1;Parent=MS.gene92905.t1 |
| chr5.1 | exon | 33092694 | 33092731 | 33092694 | ID=MS.gene92905.t1.exon4;Parent=MS.gene92905.t1 |
| chr5.1 | CDS | 33092694 | 33092731 | 33092694 | ID=cds.MS.gene92905.t1;Parent=MS.gene92905.t1 |
| chr5.1 | exon | 33092802 | 33092896 | 33092802 | ID=MS.gene92905.t1.exon5;Parent=MS.gene92905.t1 |
| chr5.1 | CDS | 33092802 | 33092896 | 33092802 | ID=cds.MS.gene92905.t1;Parent=MS.gene92905.t1 |
| chr5.1 | exon | 33093164 | 33093538 | 33093164 | ID=MS.gene92905.t1.exon6;Parent=MS.gene92905.t1 |
| chr5.1 | CDS | 33093164 | 33093538 | 33093164 | ID=cds.MS.gene92905.t1;Parent=MS.gene92905.t1 |
| chr5.1 | exon | 33093696 | 33093848 | 33093696 | ID=MS.gene92905.t1.exon7;Parent=MS.gene92905.t1 |
| chr5.1 | CDS | 33093696 | 33093848 | 33093696 | ID=cds.MS.gene92905.t1;Parent=MS.gene92905.t1 |
| Gene Sequence |
| Protein sequence |
