AlfalfaGEDB | MS.gene05878

M. sativa cultivar XinJiangDaYe / MS.gene05878

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene05878.t1	XP_013447314.1	89.9	207	21	0	1	207	1	207	3.40E-100	374.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene05878.t1	I3S9W1	89.9	207	21	0	1	207	1	207	2.5e-100	374.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04919	MS.gene05878	0.818667	1.74E-52	-1.69E-46
MS.gene04920	MS.gene05878	0.8248	6.63E-54	-1.69E-46
MS.gene049283	MS.gene05878	0.828064	1.11E-54	-1.69E-46
MS.gene049499	MS.gene05878	0.802045	6.76E-49	-1.69E-46
MS.gene049983	MS.gene05878	0.800441	1.44E-48	-1.69E-46
MS.gene051699	MS.gene05878	0.813564	2.40E-51	-1.69E-46
MS.gene052533	MS.gene05878	0.806482	8.05E-50	-1.69E-46
MS.gene053879	MS.gene05878	0.801137	1.04E-48	-1.69E-46
MS.gene053963	MS.gene05878	0.820427	6.90E-53	-1.69E-46
MS.gene054892	MS.gene05878	0.834278	3.29E-56	-1.69E-46
MS.gene054893	MS.gene05878	0.849375	3.37E-60	-1.69E-46
MS.gene054957	MS.gene05878	0.803319	3.69E-49	-1.69E-46
MS.gene055150	MS.gene05878	0.867813	1.04E-65	-1.69E-46
MS.gene05624	MS.gene05878	0.817148	3.83E-52	-1.69E-46
MS.gene057622	MS.gene05878	0.819286	1.26E-52	-1.69E-46
MS.gene058095	MS.gene05878	0.81112	8.20E-51	-1.69E-46
MS.gene058159	MS.gene05878	0.806906	6.55E-50	-1.69E-46
MS.gene058592	MS.gene05878	0.826254	3.00E-54	-1.69E-46
MS.gene05878	MS.gene059436	0.800453	1.43E-48	-1.69E-46
MS.gene05878	MS.gene05952	0.909204	7.37E-82	-1.69E-46
MS.gene05878	MS.gene05956	0.896765	2.69E-76	-1.69E-46
MS.gene05878	MS.gene05985	-0.816702	4.83E-52	-1.69E-46
MS.gene05878	MS.gene059901	-0.806222	9.13E-50	-1.69E-46
MS.gene05878	MS.gene06023	0.842468	2.54E-58	-1.69E-46
MS.gene05878	MS.gene060412	0.812684	3.75E-51	-1.69E-46
MS.gene05878	MS.gene060933	0.800048	1.73E-48	-1.69E-46
MS.gene05878	MS.gene060937	0.816204	6.24E-52	-1.69E-46
MS.gene05878	MS.gene061729	0.800963	1.13E-48	-1.69E-46
MS.gene05878	MS.gene061782	0.865596	5.27E-65	-1.69E-46
MS.gene05878	MS.gene062288	0.810891	9.20E-51	-1.69E-46
MS.gene05878	MS.gene062327	0.823088	1.67E-53	-1.69E-46
MS.gene05878	MS.gene064638	0.803053	4.19E-49	-1.69E-46
MS.gene05878	MS.gene064969	0.823999	1.02E-53	-1.69E-46
MS.gene05878	MS.gene065069	0.82272	2.04E-53	-1.69E-46
MS.gene05878	MS.gene065510	0.81864	1.76E-52	-1.69E-46
MS.gene05878	MS.gene066012	0.820025	8.53E-53	-1.69E-46
MS.gene05878	MS.gene066272	0.811965	5.38E-51	-1.69E-46
MS.gene05878	MS.gene066513	0.803666	3.13E-49	-1.69E-46
MS.gene05878	MS.gene066879	0.833116	6.42E-56	-1.69E-46
MS.gene05878	MS.gene068941	0.84291	1.94E-58	-1.69E-46
MS.gene05878	MS.gene069807	0.808607	2.85E-50	-1.69E-46
MS.gene05878	MS.gene070275	0.810218	1.29E-50	-1.69E-46
MS.gene05878	MS.gene070918	0.83128	1.83E-55	-1.69E-46
MS.gene05878	MS.gene071556	0.820551	6.46E-53	-1.69E-46
MS.gene05878	MS.gene071557	0.818768	1.65E-52	-1.69E-46
MS.gene05878	MS.gene071569	0.889318	2.70E-73	-1.69E-46
MS.gene05878	MS.gene071949	0.835959	1.24E-56	-1.69E-46
MS.gene05878	MS.gene072029	0.83424	3.36E-56	-1.69E-46
MS.gene05878	MS.gene072153	0.800712	1.27E-48	-1.69E-46
MS.gene05878	MS.gene073244	0.807773	4.29E-50	-1.69E-46
MS.gene05878	MS.gene073306	0.80473	1.88E-49	-1.69E-46
MS.gene05878	MS.gene07346	0.827899	1.21E-54	-1.69E-46
MS.gene05878	MS.gene073500	0.829739	4.35E-55	-1.69E-46
MS.gene05878	MS.gene07450	0.844911	5.64E-59	-1.69E-46
MS.gene05878	MS.gene07815	0.813831	2.10E-51	-1.69E-46
MS.gene05878	MS.gene08120	0.815085	1.11E-51	-1.69E-46
MS.gene05878	MS.gene08582	0.828326	9.57E-55	-1.69E-46
MS.gene05878	MS.gene09061	0.819337	1.22E-52	-1.69E-46
MS.gene05878	MS.gene21437	0.814385	1.58E-51	-1.69E-46
MS.gene05878	MS.gene21853	0.802823	4.67E-49	-1.69E-46
MS.gene05878	MS.gene22992	-0.811468	6.90E-51	-1.69E-46
MS.gene05878	MS.gene23651	0.805996	1.02E-49	-1.69E-46
MS.gene05878	MS.gene23695	0.807116	5.91E-50	-1.69E-46
MS.gene05878	MS.gene24851	0.821711	3.49E-53	-1.69E-46
MS.gene05878	MS.gene24852	0.81754	3.13E-52	-1.69E-46
MS.gene05878	MS.gene25688	0.801702	7.95E-49	-1.69E-46
MS.gene05878	MS.gene25991	0.800573	1.35E-48	-1.69E-46
MS.gene05878	MS.gene27204	0.83184	1.33E-55	-1.69E-46
MS.gene05878	MS.gene27997	0.835906	1.28E-56	-1.69E-46
MS.gene05878	MS.gene29036	0.824386	8.30E-54	-1.69E-46
MS.gene05878	MS.gene29096	0.82207	2.88E-53	-1.69E-46
MS.gene05878	MS.gene30878	0.813929	2.00E-51	-1.69E-46
MS.gene05878	MS.gene30961	0.816987	4.16E-52	-1.69E-46
MS.gene05878	MS.gene31072	0.812227	4.71E-51	-1.69E-46
MS.gene05878	MS.gene32409	0.800966	1.12E-48	-1.69E-46
MS.gene05878	MS.gene32411	0.801184	1.01E-48	-1.69E-46
MS.gene05878	MS.gene32688	0.815704	8.07E-52	-1.69E-46
MS.gene05878	MS.gene32801	0.803679	3.11E-49	-1.69E-46
MS.gene05878	MS.gene32866	0.807721	4.40E-50	-1.69E-46
MS.gene05878	MS.gene32929	0.85396	1.69E-61	-1.69E-46
MS.gene05878	MS.gene34078	0.802574	5.26E-49	-1.69E-46
MS.gene05878	MS.gene35858	0.807465	4.99E-50	-1.69E-46
MS.gene05878	MS.gene36100	0.847905	8.60E-60	-1.69E-46
MS.gene05878	MS.gene36571	0.815011	1.15E-51	-1.69E-46
MS.gene05878	MS.gene37412	0.816649	4.96E-52	-1.69E-46
MS.gene05878	MS.gene37471	0.801891	7.27E-49	-1.69E-46
MS.gene05878	MS.gene38368	0.843184	1.64E-58	-1.69E-46
MS.gene05878	MS.gene38759	0.803416	3.52E-49	-1.69E-46
MS.gene05878	MS.gene39037	0.876685	1.15E-68	-1.69E-46
MS.gene05878	MS.gene40608	0.822547	2.24E-53	-1.69E-46
MS.gene05878	MS.gene40991	0.807856	4.12E-50	-1.69E-46
MS.gene05878	MS.gene41022	0.806953	6.40E-50	-1.69E-46
MS.gene05878	MS.gene42516	0.803399	3.55E-49	-1.69E-46
MS.gene05878	MS.gene42653	0.813855	2.07E-51	-1.69E-46
MS.gene05878	MS.gene42752	0.81382	2.11E-51	-1.69E-46
MS.gene05878	MS.gene43381	0.833358	5.58E-56	-1.69E-46
MS.gene05878	MS.gene43682	0.806519	7.91E-50	-1.69E-46
MS.gene05878	MS.gene43808	0.815189	1.05E-51	-1.69E-46
MS.gene05878	MS.gene44909	0.865766	4.65E-65	-1.69E-46
MS.gene05878	MS.gene45290	0.807407	5.13E-50	-1.69E-46
MS.gene05878	MS.gene45708	0.803884	2.82E-49	-1.69E-46
MS.gene05878	MS.gene46055	0.862761	4.03E-64	-1.69E-46
MS.gene05878	MS.gene46408	0.822558	2.22E-53	-1.69E-46
MS.gene05878	MS.gene46442	0.816015	6.88E-52	-1.69E-46
MS.gene05878	MS.gene47195	0.801106	1.05E-48	-1.69E-46
MS.gene05878	MS.gene47967	0.812122	4.97E-51	-1.69E-46
MS.gene05878	MS.gene48078	0.807326	5.34E-50	-1.69E-46
MS.gene05878	MS.gene49627	0.839575	1.46E-57	-1.69E-46
MS.gene05878	MS.gene49733	0.822048	2.92E-53	-1.69E-46
MS.gene05878	MS.gene52122	0.816379	5.70E-52	-1.69E-46
MS.gene05878	MS.gene52994	0.821851	3.24E-53	-1.69E-46
MS.gene05878	MS.gene53391	0.838718	2.43E-57	-1.69E-46
MS.gene05878	MS.gene53612	0.803949	2.73E-49	-1.69E-46
MS.gene05878	MS.gene54123	0.800541	1.37E-48	-1.69E-46
MS.gene05878	MS.gene54704	0.817399	3.37E-52	-1.69E-46
MS.gene05878	MS.gene55699	0.839686	1.37E-57	-1.69E-46
MS.gene05878	MS.gene55707	0.836444	9.32E-57	-1.69E-46
MS.gene05878	MS.gene55755	0.837945	3.85E-57	-1.69E-46
MS.gene05878	MS.gene56300	0.812859	3.43E-51	-1.69E-46
MS.gene05878	MS.gene57028	0.818586	1.81E-52	-1.69E-46
MS.gene05878	MS.gene57128	0.840046	1.10E-57	-1.69E-46
MS.gene05878	MS.gene57783	0.821364	4.20E-53	-1.69E-46
MS.gene05878	MS.gene57980	0.81868	1.73E-52	-1.69E-46
MS.gene05878	MS.gene58527	0.832943	7.08E-56	-1.69E-46
MS.gene05878	MS.gene59032	0.818724	1.69E-52	-1.69E-46
MS.gene05878	MS.gene59086	0.801109	1.05E-48	-1.69E-46
MS.gene05878	MS.gene59616	0.806316	8.73E-50	-1.69E-46
MS.gene05878	MS.gene59697	0.834949	2.23E-56	-1.69E-46
MS.gene05878	MS.gene60384	0.808469	3.05E-50	-1.69E-46
MS.gene05878	MS.gene61064	0.833513	5.11E-56	-1.69E-46
MS.gene05878	MS.gene62676	0.874415	6.88E-68	-1.69E-46
MS.gene05878	MS.gene62677	0.878689	2.29E-69	-1.69E-46
MS.gene05878	MS.gene62895	0.80093	1.14E-48	-1.69E-46
MS.gene05878	MS.gene62926	0.804093	2.55E-49	-1.69E-46
MS.gene05878	MS.gene63430	0.827566	1.46E-54	-1.69E-46
MS.gene05878	MS.gene63577	0.81778	2.76E-52	-1.69E-46
MS.gene05878	MS.gene64284	0.825697	4.07E-54	-1.69E-46
MS.gene05878	MS.gene65294	0.814728	1.33E-51	-1.69E-46
MS.gene05878	MS.gene65295	0.822172	2.73E-53	-1.69E-46
MS.gene05878	MS.gene67131	0.804704	1.90E-49	-1.69E-46
MS.gene05878	MS.gene68086	0.833356	5.59E-56	-1.69E-46
MS.gene05878	MS.gene69691	0.837357	5.45E-57	-1.69E-46
MS.gene05878	MS.gene70154	0.854752	9.98E-62	-1.69E-46
MS.gene05878	MS.gene70742	0.8294	5.26E-55	-1.69E-46
MS.gene05878	MS.gene71828	0.812732	3.66E-51	-1.69E-46
MS.gene05878	MS.gene71867	0.827112	1.87E-54	-1.69E-46
MS.gene05878	MS.gene71945	0.812597	3.91E-51	-1.69E-46
MS.gene05878	MS.gene72748	0.830953	2.20E-55	-1.69E-46
MS.gene05878	MS.gene72950	-0.80077	1.23E-48	-1.69E-46
MS.gene05878	MS.gene73236	0.83605	1.17E-56	-1.69E-46
MS.gene05878	MS.gene73644	0.846064	2.75E-59	-1.69E-46
MS.gene05878	MS.gene73678	0.846289	2.39E-59	-1.69E-46
MS.gene05878	MS.gene74510	0.81398	1.94E-51	-1.69E-46
MS.gene05878	MS.gene74604	0.822351	2.48E-53	-1.69E-46
MS.gene05878	MS.gene75343	0.819511	1.12E-52	-1.69E-46
MS.gene05878	MS.gene76244	0.826512	2.61E-54	-1.69E-46
MS.gene05878	MS.gene76884	0.807979	3.88E-50	-1.69E-46
MS.gene05878	MS.gene77361	0.816933	4.28E-52	-1.69E-46
MS.gene05878	MS.gene78366	0.835496	1.62E-56	-1.69E-46
MS.gene05878	MS.gene78773	0.808576	2.89E-50	-1.69E-46
MS.gene05878	MS.gene79120	0.802782	4.76E-49	-1.69E-46
MS.gene05878	MS.gene79698	0.813628	2.32E-51	-1.69E-46
MS.gene05878	MS.gene79770	0.81731	3.52E-52	-1.69E-46
MS.gene05878	MS.gene80201	0.817036	4.06E-52	-1.69E-46
MS.gene05878	MS.gene80557	0.815921	7.21E-52	-1.69E-46
MS.gene05878	MS.gene80558	0.830039	3.68E-55	-1.69E-46
MS.gene05878	MS.gene81272	0.807254	5.53E-50	-1.69E-46
MS.gene05878	MS.gene81397	0.817146	3.84E-52	-1.69E-46
MS.gene05878	MS.gene81401	0.809544	1.80E-50	-1.69E-46
MS.gene05878	MS.gene83022	0.844816	5.98E-59	-1.69E-46
MS.gene05878	MS.gene83687	0.856207	3.76E-62	-1.69E-46
MS.gene05878	MS.gene83853	0.809828	1.56E-50	-1.69E-46
MS.gene05878	MS.gene84162	0.81119	7.93E-51	-1.69E-46
MS.gene05878	MS.gene84179	0.828505	8.66E-55	-1.69E-46
MS.gene05878	MS.gene84734	0.80176	7.73E-49	-1.69E-46
MS.gene05878	MS.gene85401	0.800813	1.21E-48	-1.69E-46
MS.gene05878	MS.gene85636	0.812784	3.56E-51	-1.69E-46
MS.gene05878	MS.gene86038	0.801505	8.73E-49	-1.69E-46
MS.gene05878	MS.gene86311	0.806297	8.81E-50	-1.69E-46
MS.gene05878	MS.gene86455	0.832377	9.79E-56	-1.69E-46
MS.gene05878	MS.gene87118	0.807339	5.31E-50	-1.69E-46
MS.gene05878	MS.gene88351	0.816217	6.20E-52	-1.69E-46
MS.gene05878	MS.gene88803	0.822692	2.07E-53	-1.69E-46
MS.gene05878	MS.gene89254	0.803574	3.27E-49	-1.69E-46
MS.gene05878	MS.gene89255	0.815031	1.14E-51	-1.69E-46
MS.gene05878	MS.gene89256	0.860243	2.37E-63	-1.69E-46
MS.gene05878	MS.gene89702	0.858707	6.85E-63	-1.69E-46
MS.gene05878	MS.gene90604	0.802528	5.37E-49	-1.69E-46
MS.gene05878	MS.gene92076	0.859307	4.53E-63	-1.69E-46
MS.gene05878	MS.gene92364	0.812771	3.59E-51	-1.69E-46
MS.gene05878	MS.gene92905	0.816569	5.17E-52	-1.69E-46
MS.gene05878	MS.gene93972	0.803903	2.79E-49	-1.69E-46
MS.gene05878	MS.gene94266	0.855915	4.58E-62	-1.69E-46
MS.gene05878	MS.gene94674	0.821417	4.08E-53	-1.69E-46
MS.gene05878	MS.gene95332	0.831343	1.76E-55	-1.69E-46
MS.gene05878	MS.gene95614	0.825693	4.08E-54	-1.69E-46
MS.gene05878	MS.gene96973	0.809404	1.92E-50	-1.69E-46
MS.gene05878	MS.gene97447	0.802203	6.27E-49	-1.69E-46
MS.gene05878	MS.gene98636	0.815835	7.54E-52	-1.69E-46
MS.gene05878	MS.gene99431	0.804864	1.76E-49	-1.69E-46
MS.gene05878	MS.gene99483	0.801269	9.75E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene05878.t1	MTR_8g102755	89.855	207	21	0	1	207	1	207	2.38e-140	390

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 31 sgRNAs with CRISPR-Local

Find 44 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAATGATATTGAAATGAATT+TGG	0.220117	4.4:-3399713	MS.gene05878:CDS
AAGACAGAAACAAAGAAATT+TGG	0.303541	4.4:-3400099	MS.gene05878:CDS
ATTGAAGATGATGCTACTTT+TGG	0.318948	4.4:-3400154	MS.gene05878:CDS
CAAAGCTTTCATGATGAAAA+TGG	0.325691	4.4:-3399832	MS.gene05878:CDS
CAGGTTTGCAATCAAGAAAT+AGG	0.331402	4.4:-3399621	MS.gene05878:CDS
ACTGTTCATGTTGATACTTC+AGG	0.350166	4.4:-3399640	MS.gene05878:CDS
ATTCAAATCAAGCTTGTTGC+TGG	0.398775	4.4:-3400075	MS.gene05878:CDS
ATCTATTACACCATTATTTG+CGG	0.399079	4.4:+3399861	None:intergenic
GGATGTGGACATAAATTGTT+TGG	0.414508	4.4:-3400054	MS.gene05878:CDS
GAATCTACCTTTCCTGAGTC+AGG	0.424703	4.4:+3399991	None:intergenic
AAAAGGGTCTAACGTAAAAC+AGG	0.453639	4.4:-3400178	MS.gene05878:CDS
ATCAAGCTTGTTGCTGGATG+TGG	0.461106	4.4:-3400069	MS.gene05878:CDS
GTGGAGAGTGCCGCAAATAA+TGG	0.466076	4.4:-3399871	MS.gene05878:CDS
AGAATGGAGTATCAATCTCT+TGG	0.471194	4.4:-3400216	MS.gene05878:CDS
CATAAATTGTTTGGACGGAA+AGG	0.490271	4.4:-3400045	MS.gene05878:CDS
GATATTGAAATGAATTTGGA+AGG	0.502773	4.4:-3399709	MS.gene05878:CDS
TCAGGAAAAGCTCTTTCATC+GGG	0.511579	4.4:+3400009	None:intergenic
ATAAATTGTTTGGACGGAAA+GGG	0.528425	4.4:-3400044	MS.gene05878:CDS
GTCAGGAAAAGCTCTTTCAT+CGG	0.531583	4.4:+3400008	None:intergenic
AGTATTTATGAAGTCACGTA+TGG	0.536293	4.4:-3399742	MS.gene05878:CDS
TCAGGAAAGGTAGATTCTGT+TGG	0.537763	4.4:-3399985	MS.gene05878:CDS
GTAGACGAAGAAATTAATAC+AGG	0.538396	4.4:-3399667	MS.gene05878:CDS
GTGGACATAAATTGTTTGGA+CGG	0.566125	4.4:-3400050	MS.gene05878:CDS
TGGAGTATCAATCTCTTGGA+AGG	0.588423	4.4:-3400212	MS.gene05878:CDS
ACAACTTGGAGTTGAAGAGA+AGG	0.600247	4.4:-3399917	MS.gene05878:CDS
CAACTTGGAGTTGAAGAGAA+GGG	0.601023	4.4:-3399916	MS.gene05878:CDS
CTTGATTTGATATAACAACC+AGG	0.620765	4.4:+3400122	None:intergenic
GTTTGCAATCAAGAAATAGG+TGG	0.639196	4.4:-3399618	MS.gene05878:CDS
AAATAATGGTGTAATAGATG+AGG	0.639630	4.4:-3399857	MS.gene05878:CDS
GAAAATGGTGTTCCGCCTGA+CGG	0.653575	4.4:-3399817	MS.gene05878:CDS
AATGGTGTTCCGCCTGACGG+TGG	0.691121	4.4:-3399814	MS.gene05878:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATGATATTGAAATGAATT+TGG	-	chr4.4:3400112-3400131	MS.gene05878:CDS	15.0%
!!!	CAACTTTTAGAATAGTAAAT+TGG	-	chr4.4:3400048-3400067	MS.gene05878:CDS	20.0%
!	AAATAATGGTGTAATAGATG+AGG	-	chr4.4:3399968-3399987	MS.gene05878:CDS	25.0%
!	AAGACAGAAACAAAGAAATT+TGG	-	chr4.4:3399726-3399745	MS.gene05878:CDS	25.0%
!	ATCTATTACACCATTATTTG+CGG	+	chr4.4:3399967-3399986	None:intergenic	25.0%
!	GATATTGAAATGAATTTGGA+AGG	-	chr4.4:3400116-3400135	MS.gene05878:CDS	25.0%
!!	AAAGAAAAAGAAGTACAACT+TGG	-	chr4.4:3399894-3399913	MS.gene05878:CDS	25.0%
	AAACAAGATGCAGAAAAATG+AGG	-	chr4.4:3399932-3399951	MS.gene05878:CDS	30.0%
	AGTATTTATGAAGTCACGTA+TGG	-	chr4.4:3400083-3400102	MS.gene05878:CDS	30.0%
	ATAAATTGTTTGGACGGAAA+GGG	-	chr4.4:3399781-3399800	MS.gene05878:CDS	30.0%
	CAAAGCTTTCATGATGAAAA+TGG	-	chr4.4:3399993-3400012	MS.gene05878:CDS	30.0%
	GTAGACGAAGAAATTAATAC+AGG	-	chr4.4:3400158-3400177	MS.gene05878:CDS	30.0%
!	CATTTTCATCATGAAAGCTT+TGG	+	chr4.4:3399995-3400014	None:intergenic	30.0%
!	CTTGATTTGATATAACAACC+AGG	+	chr4.4:3399706-3399725	None:intergenic	30.0%
!!!	ATTGAAGATGATGCTACTTT+TGG	-	chr4.4:3399671-3399690	MS.gene05878:CDS	30.0%
	AAAAGGGTCTAACGTAAAAC+AGG	-	chr4.4:3399647-3399666	MS.gene05878:CDS	35.0%
	ACTGTTCATGTTGATACTTC+AGG	-	chr4.4:3400185-3400204	MS.gene05878:CDS	35.0%
	CAGGTTTGCAATCAAGAAAT+AGG	-	chr4.4:3400204-3400223	MS.gene05878:CDS	35.0%
	CATAAATTGTTTGGACGGAA+AGG	-	chr4.4:3399780-3399799	MS.gene05878:CDS	35.0%
	GGATGTGGACATAAATTGTT+TGG	-	chr4.4:3399771-3399790	MS.gene05878:CDS	35.0%
	GTGGACATAAATTGTTTGGA+CGG	-	chr4.4:3399775-3399794	MS.gene05878:CDS	35.0%
	GTTTGCAATCAAGAAATAGG+TGG	-	chr4.4:3400207-3400226	MS.gene05878:CDS	35.0%
!	TGTTTTACGTTAGACCCTTT+TGG	+	chr4.4:3399648-3399667	None:intergenic	35.0%
!!	ATTCAAATCAAGCTTGTTGC+TGG	-	chr4.4:3399750-3399769	MS.gene05878:CDS	35.0%
!!	GAAGGTACCAAAAACCAAAA+GGG	-	chr4.4:3399631-3399650	MS.gene05878:CDS	35.0%
	ACAACTTGGAGTTGAAGAGA+AGG	-	chr4.4:3399908-3399927	MS.gene05878:CDS	40.0%
	CAACTTGGAGTTGAAGAGAA+GGG	-	chr4.4:3399909-3399928	MS.gene05878:CDS	40.0%
	CAAGATGCAGAAAAATGAGG+TGG	-	chr4.4:3399935-3399954	MS.gene05878:CDS	40.0%
	GTCAGGAAAAGCTCTTTCAT+CGG	+	chr4.4:3399820-3399839	None:intergenic	40.0%
	TCAGGAAAAGCTCTTTCATC+GGG	+	chr4.4:3399819-3399838	None:intergenic	40.0%
	TCAGGAAAGGTAGATTCTGT+TGG	-	chr4.4:3399840-3399859	MS.gene05878:CDS	40.0%
!	TGGAGTATCAATCTCTTGGA+AGG	-	chr4.4:3399613-3399632	MS.gene05878:CDS	40.0%
!!	GGAAGGTACCAAAAACCAAA+AGG	-	chr4.4:3399630-3399649	MS.gene05878:CDS	40.0%
!!!	CGTTAGACCCTTTTGGTTTT+TGG	+	chr4.4:3399641-3399660	None:intergenic	40.0%
	GAATCTACCTTTCCTGAGTC+AGG	+	chr4.4:3399837-3399856	None:intergenic	45.0%
!	AGCTTTTCCTGACTCAGGAA+AGG	-	chr4.4:3399827-3399846	MS.gene05878:CDS	45.0%
!	ATGTTTTCTTCACCACCGTC+AGG	+	chr4.4:3400026-3400045	None:intergenic	45.0%
!	GAAAGAGCTTTTCCTGACTC+AGG	-	chr4.4:3399822-3399841	MS.gene05878:CDS	45.0%
!!	ATCAAGCTTGTTGCTGGATG+TGG	-	chr4.4:3399756-3399775	MS.gene05878:CDS	45.0%
!!	TACTTTTGGCTGTTTGTGCC+TGG	-	chr4.4:3399685-3399704	MS.gene05878:CDS	45.0%
	GAAAATGGTGTTCCGCCTGA+CGG	-	chr4.4:3400008-3400027	MS.gene05878:CDS	50.0%
!	TTTTCTTCACCACCGTCAGG+CGG	+	chr4.4:3400023-3400042	None:intergenic	50.0%
!!	GTGGAGAGTGCCGCAAATAA+TGG	-	chr4.4:3399954-3399973	MS.gene05878:CDS	50.0%
	AATGGTGTTCCGCCTGACGG+TGG	-	chr4.4:3400011-3400030	MS.gene05878:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	3399612	3400235	3399612	ID=MS.gene05878
chr4.4	mRNA	3399612	3400235	3399612	ID=MS.gene05878.t1;Parent=MS.gene05878
chr4.4	exon	3399612	3400235	3399612	ID=MS.gene05878.t1.exon1;Parent=MS.gene05878.t1
chr4.4	CDS	3399612	3400235	3399612	ID=cds.MS.gene05878.t1;Parent=MS.gene05878.t1

Gene Sequence

>MS.gene05878

ATGGAGTATCAATCTCTTGGAAGGTACCAAAAACCAAAAGGGTCTAACGTAAAACAGGTATTGAAGATGATGCTACTTTTGGCTGTTTGTGCCTGGTTGTTATATCAAATCAAGAAGACAGAAACAAAGAAATTTGGTATTCAAATCAAGCTTGTTGCTGGATGTGGACATAAATTGTTTGGACGGAAAGGGATGCTATCACGTCCCGATGAAAGAGCTTTTCCTGACTCAGGAAAGGTAGATTCTGTTGGAGAAGTAACAAATGAGTTTAAAAGTAATGACAAAGAAAAAGAAGTACAACTTGGAGTTGAAGAGAAGGGAAACAAGATGCAGAAAAATGAGGTGGAGAGTGCCGCAAATAATGGTGTAATAGATGAGGTCCAAAGCTTTCATGATGAAAATGGTGTTCCGCCTGACGGTGGTGAAGAAAACATGTCAACTTTTAGAATAGTAAATTGGCTTAAAAAGATCAGTATTTATGAAGTCACGTATGGAGAAGATAATGATATTGAAATGAATTTGGAAGGAACGACGAATGCTACAACAGTAGACGAAGAAATTAATACAGGAACTACTGTTCATGTTGATACTTCAGGTTTGCAATCAAGAAATAGGTGGAGATAA

Protein sequence

>MS.gene05878.t1

MEYQSLGRYQKPKGSNVKQVLKMMLLLAVCAWLLYQIKKTETKKFGIQIKLVAGCGHKLFGRKGMLSRPDERAFPDSGKVDSVGEVTNEFKSNDKEKEVQLGVEEKGNKMQKNEVESAANNGVIDEVQSFHDENGVPPDGGEENMSTFRIVNWLKKISIYEVTYGEDNDIEMNLEGTTNATTVDEEINTGTTVHVDTSGLQSRNRWR