AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93283


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93283.t1 MTR_4g008630 94.624 465 24 1 1 465 1 464 0.0 890
MS.gene93283.t1 MTR_1g029540 86.481 466 57 3 1 465 1 461 0.0 818
MS.gene93283.t1 MTR_8g090095 67.749 462 142 5 10 465 21 481 0.0 631
MS.gene93283.t1 MTR_5g087620 31.187 497 284 18 15 465 11 495 2.07e-56 195
MS.gene93283.t1 MTR_4g485630 30.879 489 273 16 15 463 10 473 1.91e-55 192
MS.gene93283.t1 MTR_6g005600 30.462 476 275 14 15 456 7 460 2.49e-54 189
MS.gene93283.t1 MTR_7g117170 30.769 481 270 16 9 452 10 464 2.76e-54 189
MS.gene93283.t1 MTR_5g464760 29.352 494 291 16 8 463 6 479 3.10e-54 189
MS.gene93283.t1 MTR_8g008990 29.677 465 286 10 15 452 7 457 8.30e-54 187
MS.gene93283.t1 MTR_6g038230 28.803 493 280 17 6 465 2 456 1.01e-53 187
MS.gene93283.t1 MTR_7g071040 31.992 497 270 20 2 452 5 479 1.35e-53 187
MS.gene93283.t1 MTR_0184s0040 30.835 467 275 15 15 452 22 469 1.36e-53 187
MS.gene93283.t1 MTR_0078s0190 30.835 467 275 15 15 452 22 469 1.36e-53 187
MS.gene93283.t1 MTR_8g009055 30.022 463 285 11 15 452 7 455 2.83e-53 186
MS.gene93283.t1 MTR_8g027870 30.932 472 273 14 14 456 18 465 3.78e-53 186
MS.gene93283.t1 MTR_7g070660 30.309 485 277 17 8 452 5 468 7.12e-53 185
MS.gene93283.t1 MTR_0078s0010 30.508 413 252 11 77 461 58 463 1.16e-52 184
MS.gene93283.t1 MTR_7g047030 29.375 480 283 15 15 461 7 463 1.70e-52 184
MS.gene93283.t1 MTR_7g047270 29.375 480 283 15 15 461 7 463 1.70e-52 184
MS.gene93283.t1 MTR_6g488280 28.481 474 300 11 10 459 2 460 2.57e-52 183
MS.gene93283.t1 MTR_0428s0010 28.481 474 300 11 10 459 2 460 2.57e-52 183
MS.gene93283.t1 MTR_8g066610 28.427 496 296 14 7 463 2 477 4.32e-52 183
MS.gene93283.t1 MTR_8g027885 30.444 473 274 14 14 456 18 465 4.78e-52 182
MS.gene93283.t1 MTR_8g006270 30.445 427 251 14 66 465 58 465 5.15e-52 182
MS.gene93283.t1 MTR_5g464810 29.328 491 285 19 9 460 7 474 6.18e-52 182
MS.gene93283.t1 MTR_5g064240 29.328 491 285 19 9 460 7 474 6.18e-52 182
MS.gene93283.t1 MTR_8g009050 31.330 466 275 15 15 452 7 455 6.47e-52 182
MS.gene93283.t1 MTR_8g077590 39.231 260 146 5 199 452 202 455 7.03e-52 182
MS.gene93283.t1 MTR_3g008010 28.513 491 283 17 16 463 12 477 1.04e-51 182
MS.gene93283.t1 MTR_7g070800 29.448 489 273 16 10 452 2 464 1.69e-51 181
MS.gene93283.t1 MTR_7g102460 28.571 490 296 16 16 465 11 486 2.10e-51 181
MS.gene93283.t1 MTR_6g023665 28.482 481 305 12 3 459 2 467 4.20e-51 180
MS.gene93283.t1 MTR_7g046490 30.786 471 286 9 15 461 7 461 5.24e-51 179
MS.gene93283.t1 MTR_6g033675 28.661 478 288 16 14 459 4 460 5.52e-51 180
MS.gene93283.t1 MTR_4g031800 29.980 497 266 19 15 463 10 472 6.98e-51 180
MS.gene93283.t1 MTR_8g009063 28.842 475 300 12 1 452 3 462 7.84e-51 179
MS.gene93283.t1 MTR_0536s0020 37.847 288 159 9 191 460 191 476 9.76e-51 179
MS.gene93283.t1 MTR_4g108250 29.979 487 284 15 8 452 5 476 1.29e-50 179
MS.gene93283.t1 MTR_7g070940 36.842 304 171 8 173 463 177 472 1.36e-50 179
MS.gene93283.t1 MTR_7g117405 29.752 484 287 15 16 463 14 480 4.12e-50 177
MS.gene93283.t1 MTR_7g070860 29.691 485 259 16 12 452 5 451 1.11e-49 176
MS.gene93283.t1 MTR_7g102550 30.020 493 286 16 11 460 6 482 1.88e-49 176
MS.gene93283.t1 MTR_8g465670 27.066 484 301 14 10 460 3 467 2.34e-49 176
MS.gene93283.t1 MTR_0288s0020 29.158 487 270 17 15 463 11 460 2.50e-49 175
MS.gene93283.t1 MTR_4g117890 35.836 293 168 9 191 465 186 476 2.60e-49 176
MS.gene93283.t1 MTR_4g118000 28.216 482 283 17 18 465 16 468 5.68e-49 174
MS.gene93283.t1 MTR_7g102490 28.169 497 299 17 12 465 7 488 6.03e-49 175
MS.gene93283.t1 MTR_4g485640 35.216 301 171 9 177 460 370 663 9.02e-49 177
MS.gene93283.t1 MTR_4g117960 30.247 486 273 19 18 460 15 477 9.39e-49 174
MS.gene93283.t1 MTR_6g038200 27.992 493 284 17 6 465 2 456 9.69e-49 173
MS.gene93283.t1 MTR_8g012630 42.180 211 112 2 257 459 203 411 1.00e-48 172
MS.gene93283.t1 MTR_8g012745 37.050 278 153 7 195 459 196 464 1.03e-48 174
MS.gene93283.t1 MTR_7g055710 29.158 487 284 18 8 452 5 472 1.44e-48 174
MS.gene93283.t1 MTR_7g070930 28.906 512 290 17 1 463 1 487 1.86e-48 174
MS.gene93283.t1 MTR_2g008210 27.459 488 290 18 16 463 13 476 1.86e-48 173
MS.gene93283.t1 MTR_7g102450 34.589 292 169 7 191 465 187 473 1.97e-48 173
MS.gene93283.t1 MTR_8g009073 30.323 465 282 15 15 453 7 455 2.10e-48 172
MS.gene93283.t1 MTR_1g019510 29.654 462 287 11 15 453 7 453 2.44e-48 172
MS.gene93283.t1 MTR_6g038240 29.263 475 289 16 10 463 6 454 2.65e-48 172
MS.gene93283.t1 MTR_2g035040 37.945 253 140 7 229 465 137 388 3.56e-48 170
MS.gene93283.t1 MTR_4g485620 32.759 290 175 7 184 463 175 454 3.63e-48 172
MS.gene93283.t1 MTR_3g069690 29.211 469 284 13 15 463 9 449 4.13e-48 172
MS.gene93283.t1 MTR_8g012635 40.084 237 131 3 231 459 234 467 5.35e-48 172
MS.gene93283.t1 MTR_8g008970 29.828 466 280 12 13 450 5 451 7.65e-48 176
MS.gene93283.t1 MTR_8g008970 36.000 250 145 5 204 452 542 777 2.02e-38 149
MS.gene93283.t1 MTR_8g012650 39.419 241 135 3 231 463 234 471 1.04e-47 171
MS.gene93283.t1 MTR_8g009073 32.432 333 206 8 133 453 1 326 1.05e-47 167
MS.gene93283.t1 MTR_6g038220 27.292 480 282 16 16 465 13 455 1.11e-47 171
MS.gene93283.t1 MTR_0078s0060 28.810 479 286 17 15 461 7 462 1.32e-47 171
MS.gene93283.t1 MTR_7g102560 34.589 292 165 8 194 465 200 485 1.37e-47 171
MS.gene93283.t1 MTR_5g058320 26.358 497 273 14 16 463 12 464 1.51e-47 170
MS.gene93283.t1 MTR_6g035265 28.482 481 291 18 18 465 15 475 1.63e-47 171
MS.gene93283.t1 MTR_7g070610 29.098 488 278 18 11 452 10 475 1.83e-47 171
MS.gene93283.t1 MTR_3g479490 24.400 500 298 16 15 465 7 475 1.98e-47 170
MS.gene93283.t1 MTR_4g117980 36.082 291 163 10 194 465 197 483 2.34e-47 170
MS.gene93283.t1 MTR_7g070810 29.375 480 278 16 12 452 7 464 2.39e-47 170
MS.gene93283.t1 MTR_0184s0030 35.016 317 182 8 154 459 160 463 2.77e-47 170
MS.gene93283.t1 MTR_3g079480 25.720 486 305 14 15 463 22 488 3.76e-47 170
MS.gene93283.t1 MTR_6g013440 26.653 499 284 16 16 463 13 480 4.34e-47 169
MS.gene93283.t1 MTR_8g071070 29.184 490 283 19 9 460 2 465 4.89e-47 169
MS.gene93283.t1 MTR_6g033625 26.834 477 296 15 15 459 5 460 5.03e-47 169
MS.gene93283.t1 MTR_6g014250 26.775 493 289 15 16 463 12 477 6.72e-47 169
MS.gene93283.t1 MTR_6g014270 26.884 491 295 15 16 463 9 478 7.10e-47 169
MS.gene93283.t1 MTR_7g070910 29.412 493 276 19 8 452 5 473 7.92e-47 169
MS.gene93283.t1 MTR_6g033725 27.721 487 272 16 14 456 4 454 8.74e-47 169
MS.gene93283.t1 MTR_8g006260 30.688 378 225 11 111 461 99 466 9.40e-47 168
MS.gene93283.t1 MTR_6g013450 26.139 505 298 14 7 463 3 480 1.25e-46 168
MS.gene93283.t1 MTR_5g031840 29.339 484 279 14 15 463 6 461 1.39e-46 167
MS.gene93283.t1 MTR_6g014170 27.651 481 284 16 16 463 12 461 1.49e-46 167
MS.gene93283.t1 MTR_0036s0220 28.000 475 269 17 9 439 7 452 1.55e-46 168
MS.gene93283.t1 MTR_7g070740 29.175 497 287 16 8 460 5 480 1.64e-46 168
MS.gene93283.t1 MTR_6g035185 34.629 283 156 9 209 465 205 484 1.64e-46 168
MS.gene93283.t1 MTR_8g009067 30.563 373 236 9 96 453 91 455 1.97e-46 167
MS.gene93283.t1 MTR_5g045960 28.118 473 290 15 16 449 11 472 2.01e-46 168
MS.gene93283.t1 MTR_8g007585 27.948 458 244 16 15 463 11 391 2.31e-46 166
MS.gene93283.t1 MTR_8g009067 36.863 255 152 5 205 453 86 337 2.96e-46 164
MS.gene93283.t1 MTR_5g016480 27.273 495 293 17 9 463 3 470 3.08e-46 167
MS.gene93283.t1 MTR_8g006710 34.628 309 189 8 162 463 163 465 3.35e-46 167
MS.gene93283.t1 MTR_6g014290 26.327 490 297 16 15 463 11 477 3.78e-46 167
MS.gene93283.t1 MTR_6g014200 26.789 489 296 14 16 463 9 476 5.62e-46 166
MS.gene93283.t1 MTR_3g009510 33.212 274 167 5 201 460 202 473 6.39e-46 166
MS.gene93283.t1 MTR_6g014310 26.667 495 291 16 15 463 12 480 7.22e-46 166
MS.gene93283.t1 MTR_7g012120 36.237 287 160 9 201 465 200 485 7.82e-46 166
MS.gene93283.t1 MTR_4g024020 26.572 493 305 16 16 465 11 489 9.73e-46 166
MS.gene93283.t1 MTR_2g046750 27.521 476 306 14 15 465 6 467 2.39e-45 164
MS.gene93283.t1 MTR_6g013920 27.416 507 287 17 7 463 3 478 2.58e-45 165
MS.gene93283.t1 MTR_8g006730 35.632 261 158 4 204 459 207 462 2.80e-45 164
MS.gene93283.t1 MTR_5g045970 28.231 503 280 20 15 463 17 492 3.24e-45 165
MS.gene93283.t1 MTR_2g034990 37.795 254 139 8 229 465 232 483 3.45e-45 164
MS.gene93283.t1 MTR_8g012730 43.350 203 97 3 260 450 99 295 3.60e-45 160
MS.gene93283.t1 MTR_7g070780 29.615 493 290 17 8 460 5 480 3.98e-45 164
MS.gene93283.t1 MTR_6g014150 26.327 490 299 13 15 463 8 476 4.60e-45 164
MS.gene93283.t1 MTR_4g117950 28.879 464 295 14 18 460 10 459 5.72e-45 164
MS.gene93283.t1 MTR_3g479520 26.025 488 301 17 15 463 16 482 7.02e-45 164
MS.gene93283.t1 MTR_6g014020 25.703 498 308 13 7 463 3 479 7.95e-45 163
MS.gene93283.t1 MTR_6g033615 26.452 465 299 13 15 459 5 446 8.35e-45 163
MS.gene93283.t1 MTR_6g014187 25.662 491 301 13 15 463 11 479 9.88e-45 163
MS.gene93283.t1 MTR_7g011470 27.557 479 287 15 16 463 12 461 1.28e-44 162
MS.gene93283.t1 MTR_2g040530 27.826 460 281 17 31 465 33 466 1.45e-44 162
MS.gene93283.t1 MTR_3g479470 26.834 477 288 13 15 452 14 468 2.15e-44 162
MS.gene93283.t1 MTR_1g019520 39.810 211 119 4 257 462 3 210 2.96e-44 155
MS.gene93283.t1 MTR_7g067120 26.829 451 293 13 15 463 10 425 3.12e-44 160
MS.gene93283.t1 MTR_4g094220 27.419 496 288 19 15 463 8 478 3.32e-44 162
MS.gene93283.t1 MTR_6g038300 27.386 482 300 15 6 464 2 456 3.36e-44 161
MS.gene93283.t1 MTR_6g014220 26.327 490 295 16 16 463 12 477 3.52e-44 161
MS.gene93283.t1 MTR_2g046820 27.880 434 255 15 64 465 57 464 3.53e-44 161
MS.gene93283.t1 MTR_6g033660 27.349 479 286 17 14 456 4 456 3.54e-44 161
MS.gene93283.t1 MTR_7g011470 27.216 485 285 15 16 463 12 465 4.91e-44 161
MS.gene93283.t1 MTR_1g062380 27.347 490 302 17 15 463 17 493 1.01e-43 160
MS.gene93283.t1 MTR_8g006220 26.572 493 301 15 10 460 2 475 1.02e-43 160
MS.gene93283.t1 MTR_6g013990 26.839 503 278 16 15 463 11 477 1.10e-43 160
MS.gene93283.t1 MTR_6g014040 25.703 498 309 13 7 463 3 480 1.18e-43 160
MS.gene93283.t1 MTR_3g069710 29.167 480 268 16 15 463 13 451 1.51e-43 159
MS.gene93283.t1 MTR_5g067170 36.759 253 143 7 229 465 230 481 2.47e-43 159
MS.gene93283.t1 MTR_6g013900 38.426 216 115 4 248 463 281 478 2.71e-43 159
MS.gene93283.t1 MTR_5g090630 28.601 486 284 19 15 463 6 465 3.04e-43 159
MS.gene93283.t1 MTR_0891s0010 36.245 229 122 6 235 452 63 278 3.84e-43 154
MS.gene93283.t1 MTR_6g014190 36.111 216 120 4 248 463 89 286 6.88e-43 153
MS.gene93283.t1 MTR_0477s0010 36.111 216 120 4 248 463 119 316 8.84e-43 154
MS.gene93283.t1 MTR_0009s0240 27.673 477 297 17 9 460 2 455 1.15e-42 157
MS.gene93283.t1 MTR_2g035020 37.751 249 138 7 233 465 236 483 1.51e-42 157
MS.gene93283.t1 MTR_4g064987 27.660 470 290 17 15 463 9 449 1.52e-42 156
MS.gene93283.t1 MTR_4g485590 37.963 216 118 5 192 400 175 381 1.66e-42 155
MS.gene93283.t1 MTR_5g029800 35.294 289 161 9 201 465 193 479 1.81e-42 157
MS.gene93283.t1 MTR_0536s0010 35.135 259 149 7 222 465 224 478 3.17e-42 156
MS.gene93283.t1 MTR_8g059425 26.230 488 298 16 16 463 12 477 3.50e-42 156
MS.gene93283.t1 MTR_5g035580 26.585 489 280 17 11 464 10 454 3.51e-42 155
MS.gene93283.t1 MTR_4g095008 25.726 482 306 13 10 463 7 464 5.51e-42 157
MS.gene93283.t1 MTR_4g064987 27.409 467 289 16 15 463 9 443 6.26e-42 155
MS.gene93283.t1 MTR_5g090700 26.804 485 305 15 15 463 6 476 7.85e-42 155
MS.gene93283.t1 MTR_8g032950 28.629 496 283 17 15 465 13 482 9.20e-42 155
MS.gene93283.t1 MTR_4g094920 32.374 278 167 7 200 463 209 479 1.85e-41 154
MS.gene93283.t1 MTR_7g067330 27.523 436 263 14 15 438 10 404 3.15e-41 152
MS.gene93283.t1 MTR_5g035560 25.558 493 288 16 6 463 3 451 4.16e-41 154
MS.gene93283.t1 MTR_5g019580 38.498 213 121 3 237 439 242 454 4.69e-41 153
MS.gene93283.t1 MTR_7g080935 28.392 479 283 19 11 463 8 452 6.31e-41 152
MS.gene93283.t1 MTR_5g019580 38.498 213 121 3 237 439 266 478 6.49e-41 153
MS.gene93283.t1 MTR_2g059240 26.804 485 291 15 15 464 14 469 7.58e-41 152
MS.gene93283.t1 MTR_5g031830 28.715 498 284 18 6 463 4 470 8.14e-41 152
MS.gene93283.t1 MTR_5g090660 27.869 488 292 18 15 463 6 472 8.79e-41 154
MS.gene93283.t1 MTR_7g470610 37.229 231 124 6 202 421 68 288 1.19e-40 147
MS.gene93283.t1 MTR_7g070583 37.229 231 124 6 202 421 68 288 1.19e-40 147
MS.gene93283.t1 MTR_5g072860 28.747 487 269 21 15 463 19 465 2.39e-40 151
MS.gene93283.t1 MTR_6g014050 32.319 263 153 5 210 463 234 480 3.26e-40 150
MS.gene93283.t1 MTR_6g011340 33.080 263 151 5 210 463 233 479 4.70e-40 150
MS.gene93283.t1 MTR_3g479610 34.434 212 126 4 252 463 114 312 5.12e-40 146
MS.gene93283.t1 MTR_6g013960 35.648 216 121 4 248 463 282 479 7.02e-40 150
MS.gene93283.t1 MTR_8g044140 33.577 274 161 7 206 463 180 448 8.14e-40 149
MS.gene93283.t1 MTR_1g107350 26.052 499 298 13 8 465 2 470 1.15e-39 149
MS.gene93283.t1 MTR_3g049970 25.466 483 315 14 9 463 4 469 1.19e-39 149
MS.gene93283.t1 MTR_5g098930 34.979 243 139 8 235 463 230 467 1.29e-39 149
MS.gene93283.t1 MTR_5g090620 27.181 493 292 18 15 463 6 475 1.54e-39 149
MS.gene93283.t1 MTR_5g031860 27.733 494 293 15 6 463 4 469 1.63e-39 149
MS.gene93283.t1 MTR_7g102520 28.343 501 304 14 4 463 2 488 1.90e-39 149
MS.gene93283.t1 MTR_4g128690 37.719 228 123 6 237 464 245 453 2.51e-39 147
MS.gene93283.t1 MTR_5g090580 27.789 493 288 18 15 463 6 474 2.72e-39 148
MS.gene93283.t1 MTR_6g014240 25.311 482 296 16 9 463 2 446 3.08e-39 147
MS.gene93283.t1 MTR_2g098430 29.545 484 291 20 15 461 7 477 3.20e-39 148
MS.gene93283.t1 MTR_1g107380 31.489 235 143 5 237 463 248 472 4.47e-39 147
MS.gene93283.t1 MTR_5g075440 25.866 491 276 19 15 463 11 455 5.00e-39 147
MS.gene93283.t1 MTR_1g107375 25.510 490 295 16 9 465 3 455 5.34e-39 147
MS.gene93283.t1 MTR_7g071050 27.463 477 264 16 1 448 1 424 5.90e-39 146
MS.gene93283.t1 MTR_8g043470 35.266 207 120 3 257 463 185 377 6.21e-39 145
MS.gene93283.t1 MTR_8g064870 26.994 489 302 15 9 463 6 473 6.44e-39 147
MS.gene93283.t1 MTR_7g080940 25.971 489 282 17 11 463 8 452 7.14e-39 146
MS.gene93283.t1 MTR_7g070870 37.445 227 128 5 176 396 187 405 8.09e-39 147
MS.gene93283.t1 MTR_1g107360 33.333 210 126 2 256 465 268 463 8.10e-39 147
MS.gene93283.t1 MTR_5g090600 27.101 476 292 16 15 463 6 453 2.03e-38 145
MS.gene93283.t1 MTR_7g080950 35.885 209 119 4 252 460 251 444 2.34e-38 145
MS.gene93283.t1 MTR_5g016660 25.000 496 320 17 6 463 2 483 3.45e-38 145
MS.gene93283.t1 MTR_7g013180 26.797 459 281 16 16 450 7 434 3.72e-38 144
MS.gene93283.t1 MTR_8g074550 33.471 242 132 6 235 452 241 477 3.78e-38 145
MS.gene93283.t1 MTR_5g090670 35.918 245 134 10 235 463 239 476 1.01e-37 144
MS.gene93283.t1 MTR_1g107365 25.673 483 292 14 15 465 46 493 1.63e-37 144
MS.gene93283.t1 MTR_5g090610 33.195 241 144 8 235 463 225 460 1.89e-37 143
MS.gene93283.t1 MTR_5g070090 26.186 485 289 20 15 464 12 462 3.04e-37 142
MS.gene93283.t1 MTR_8g088560 25.767 489 285 18 15 465 11 459 8.98e-37 140
MS.gene93283.t1 MTR_7g080900 27.049 488 278 20 9 460 7 452 1.22e-36 140
MS.gene93283.t1 MTR_4g082820 34.231 260 159 6 208 460 206 460 1.23e-36 140
MS.gene93283.t1 MTR_6g014300 25.502 498 303 16 1 463 1 465 2.13e-36 140
MS.gene93283.t1 MTR_1g107285 24.949 493 302 15 10 465 4 465 2.74e-36 140
MS.gene93283.t1 MTR_8g466240 27.651 481 286 18 12 463 6 453 4.03e-36 139
MS.gene93283.t1 MTR_3g084530 35.878 262 150 7 216 463 215 472 5.05e-36 139
MS.gene93283.t1 MTR_5g072810 28.074 488 267 21 15 464 13 454 5.12e-36 139
MS.gene93283.t1 MTR_8g083290 26.707 498 271 17 15 460 5 460 6.74e-36 138
MS.gene93283.t1 MTR_4g082810 40.957 188 102 3 208 390 212 395 7.45e-36 137
MS.gene93283.t1 MTR_5g072820 27.542 472 287 16 15 464 11 449 9.07e-36 138
MS.gene93283.t1 MTR_7g013220 23.932 468 306 13 16 460 7 447 2.00e-35 137
MS.gene93283.t1 MTR_5g027210 38.021 192 105 3 258 441 275 460 2.47e-35 137
MS.gene93283.t1 MTR_8g083280 36.715 207 115 4 258 463 270 461 3.97e-35 136
MS.gene93283.t1 MTR_3g084540 35.115 262 153 6 216 463 215 473 7.66e-35 135
MS.gene93283.t1 MTR_1g040310 32.130 277 158 8 206 463 218 483 7.92e-35 136
MS.gene93283.t1 MTR_7g070760 34.842 221 99 5 189 400 17 201 5.24e-34 127
MS.gene93283.t1 MTR_1g107315 26.025 488 294 14 15 463 9 468 8.85e-34 133
MS.gene93283.t1 MTR_8g064880 25.726 482 321 13 9 463 4 475 1.01e-33 132
MS.gene93283.t1 MTR_5g072830 27.824 478 278 20 15 464 11 449 1.29e-33 132
MS.gene93283.t1 MTR_5g040030 31.734 271 164 7 206 460 219 484 1.76e-33 132
MS.gene93283.t1 MTR_7g013240 31.513 238 133 4 231 461 223 437 2.44e-33 131
MS.gene93283.t1 MTR_3g084520 36.530 219 124 5 250 463 264 472 4.06e-33 131
MS.gene93283.t1 MTR_1g032490 26.195 481 306 12 15 465 11 472 4.26e-33 130
MS.gene93283.t1 MTR_7g013200 23.391 466 300 11 16 460 7 436 7.63e-33 129
MS.gene93283.t1 MTR_5g072840 33.898 236 132 6 235 463 230 448 2.14e-32 128
MS.gene93283.t1 MTR_2086s0010 35.260 173 99 4 280 452 1 160 4.19e-32 121
MS.gene93283.t1 MTR_1996s0010 35.260 173 99 4 280 452 1 160 4.19e-32 121
MS.gene93283.t1 MTR_4g128720 26.243 503 276 18 5 464 6 456 4.71e-32 127
MS.gene93283.t1 MTR_8g056740 30.041 243 140 5 203 436 112 333 5.83e-32 126
MS.gene93283.t1 MTR_6g035295 30.435 276 165 7 206 463 218 484 5.99e-32 128
MS.gene93283.t1 MTR_3g009490 35.870 184 110 3 284 460 3 185 7.96e-32 120
MS.gene93283.t1 MTR_7g013260 30.672 238 135 4 231 461 224 438 1.51e-31 126
MS.gene93283.t1 MTR_3g031400 33.649 211 121 4 255 463 256 449 3.58e-31 125
MS.gene93283.t1 MTR_3g031450 32.719 217 127 4 250 464 253 452 5.10e-31 125
MS.gene93283.t1 MTR_5g070040 34.894 235 131 11 235 460 242 463 6.64e-31 124
MS.gene93283.t1 MTR_5g004940 31.429 210 117 4 257 465 196 379 2.18e-30 122
MS.gene93283.t1 MTR_5g039900 30.037 273 164 7 206 460 217 480 6.14e-30 122
MS.gene93283.t1 MTR_8g009840 38.095 189 99 5 275 452 333 514 8.66e-30 122
MS.gene93283.t1 MTR_5g098960 33.803 213 116 6 256 465 258 448 2.03e-29 120
MS.gene93283.t1 MTR_0536s0030 41.104 163 86 4 308 460 186 348 7.50e-29 117
MS.gene93283.t1 MTR_7g039550 30.488 246 145 6 233 460 21 258 1.48e-28 114
MS.gene93283.t1 MTR_8g068360 23.861 461 287 11 15 440 13 444 2.28e-28 117
MS.gene93283.t1 MTR_5g066390 38.462 143 79 3 322 463 80 214 3.30e-28 111
MS.gene93283.t1 MTR_8g068340 25.439 456 287 13 15 440 13 445 6.43e-28 116
MS.gene93283.t1 MTR_2g008226 25.941 478 273 20 7 438 3 445 6.17e-27 113
MS.gene93283.t1 MTR_6g078320 31.364 220 138 6 236 450 255 466 9.15e-27 112
MS.gene93283.t1 MTR_6g036650 34.872 195 102 5 203 389 219 396 1.27e-26 112
MS.gene93283.t1 MTR_7g070995 43.307 127 60 3 334 450 7 131 1.58e-26 105
MS.gene93283.t1 MTR_8g007565 31.154 260 146 9 217 465 223 460 6.07e-26 110
MS.gene93283.t1 MTR_2g046620 34.066 182 103 4 260 438 270 437 9.50e-26 109
MS.gene93283.t1 MTR_4g077960 32.796 186 110 4 260 443 246 418 1.02e-25 109
MS.gene93283.t1 MTR_8g068330 33.871 186 108 3 259 440 267 441 1.15e-25 109
MS.gene93283.t1 MTR_8g007650 31.154 260 146 9 217 465 223 460 1.25e-25 109
MS.gene93283.t1 MTR_2g008225 28.413 271 166 8 203 465 214 464 1.62e-25 109
MS.gene93283.t1 MTR_6g042310 28.854 253 152 8 201 443 210 444 1.66e-25 108
MS.gene93283.t1 MTR_5g072850 23.958 384 221 11 15 393 11 328 2.86e-25 107
MS.gene93283.t1 MTR_4g123553 28.516 256 150 8 189 435 202 433 3.28e-25 108
MS.gene93283.t1 MTR_2g008220 32.778 180 108 3 260 438 273 440 3.47e-25 108
MS.gene93283.t1 MTR_3g435310 33.708 178 103 4 260 435 228 392 3.70e-25 107
MS.gene93283.t1 MTR_6g014185 30.918 207 100 4 258 463 180 344 7.24e-25 105
MS.gene93283.t1 MTR_6g014000 38.583 127 72 2 336 462 34 154 1.64e-24 106
MS.gene93283.t1 MTR_5g066410 32.407 216 122 6 254 465 241 436 1.64e-24 105
MS.gene93283.t1 MTR_6g014186 23.156 488 277 16 16 463 9 438 1.23e-23 103
MS.gene93283.t1 MTR_6g014160 25.658 304 131 7 170 463 174 392 1.34e-23 102
MS.gene93283.t1 MTR_1g090270 25.161 465 291 16 2 437 3 439 2.99e-23 102
MS.gene93283.t1 MTR_6g013680 30.093 216 81 7 248 463 229 374 4.41e-23 100
MS.gene93283.t1 MTR_5g090690 32.323 198 109 6 232 423 164 342 4.77e-22 97.8
MS.gene93283.t1 MTR_1g107325 34.091 132 86 1 334 465 224 354 7.46e-21 94.4
MS.gene93283.t1 MTR_4g079270 31.068 206 133 3 195 400 199 395 4.20e-20 92.8
MS.gene93283.t1 MTR_2g014900 23.007 439 287 13 15 429 8 419 7.80e-20 92.0
MS.gene93283.t1 MTR_4g059370 29.528 254 151 8 196 437 129 366 7.41e-19 88.6
MS.gene93283.t1 MTR_4g079250 27.801 241 163 4 195 435 199 428 2.03e-18 87.8
MS.gene93283.t1 MTR_7g080960 26.291 213 85 4 257 463 324 470 1.01e-17 85.9
MS.gene93283.t1 MTR_2g083430 26.860 242 162 6 204 442 208 437 1.39e-16 82.4
MS.gene93283.t1 MTR_2g083380 23.922 464 296 15 8 442 19 454 2.98e-15 78.2
MS.gene93283.t1 MTR_2g083490 23.861 461 300 16 8 442 2 437 1.15e-14 76.3
MS.gene93283.t1 MTR_2g083480 25.417 240 164 6 206 442 210 437 1.42e-13 72.8
MS.gene93283.t1 MTR_2g083420 26.721 247 134 8 206 445 210 416 1.05e-12 70.1
MS.gene93283.t1 MTR_8g006230 28.780 205 121 6 123 308 51 249 2.02e-12 68.2
MS.gene93283.t1 MTR_1g090280 32.143 168 99 5 277 437 130 289 3.98e-12 67.4
MS.gene93283.t1 MTR_2g009740 38.776 98 45 3 249 346 196 278 1.20e-11 65.9
MS.gene93283.t1 MTR_0078s0200 36.893 103 62 2 203 304 205 305 4.29e-11 64.3
MS.gene93283.t1 MTR_0475s0030 42.424 66 38 0 350 415 11 76 7.20e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93283.t1 AT2G15490 28.660 485 307 12 9 463 2 477 3.24e-56 194
MS.gene93283.t1 AT2G15490 28.689 488 306 12 9 463 2 480 1.12e-55 192
MS.gene93283.t1 AT4G34131 28.953 487 292 12 15 464 11 480 2.72e-54 189
MS.gene93283.t1 AT2G36780 29.447 506 300 18 1 465 1 490 6.67e-54 188
MS.gene93283.t1 AT2G15480 27.423 485 307 13 12 463 8 480 2.77e-52 184
MS.gene93283.t1 AT2G36770 28.543 501 311 15 1 465 1 490 1.74e-51 182
MS.gene93283.t1 AT1G73880 28.600 493 297 17 1 464 1 467 8.19e-51 179
MS.gene93283.t1 AT2G31750 28.980 490 277 17 10 465 4 456 3.23e-50 177
MS.gene93283.t1 AT2G31750 28.980 490 277 17 10 465 4 456 5.04e-50 177
MS.gene93283.t1 AT2G15480 26.869 495 307 15 12 463 8 490 5.38e-50 177
MS.gene93283.t1 AT4G34135 27.218 496 310 11 5 464 2 482 2.59e-49 176
MS.gene93283.t1 AT2G36800 27.071 495 293 18 16 463 14 487 4.07e-49 175
MS.gene93283.t1 AT3G53160 28.921 491 288 17 16 463 10 482 3.23e-48 172
MS.gene93283.t1 AT2G36760 28.870 478 283 16 16 452 16 477 1.00e-47 171
MS.gene93283.t1 AT2G36750 27.479 484 307 14 16 465 12 485 3.20e-47 170
MS.gene93283.t1 AT5G03490 28.238 471 271 15 15 455 20 453 4.82e-47 169
MS.gene93283.t1 AT3G11340 29.122 467 283 13 14 463 9 444 8.21e-47 168
MS.gene93283.t1 AT3G16520 27.586 464 305 12 15 460 6 456 1.08e-46 168
MS.gene93283.t1 AT5G26310 30.688 378 224 10 112 455 85 458 1.23e-46 168
MS.gene93283.t1 AT4G34138 33.910 289 159 7 192 464 207 479 1.76e-46 168
MS.gene93283.t1 AT1G10400 28.306 484 283 18 12 460 5 459 1.80e-46 167
MS.gene93283.t1 AT4G01070 29.362 470 278 14 15 452 9 456 2.13e-46 167
MS.gene93283.t1 AT3G50740 32.448 339 192 10 145 452 130 462 3.00e-46 167
MS.gene93283.t1 AT3G46670 38.039 255 143 5 210 463 208 448 5.88e-46 166
MS.gene93283.t1 AT5G66690 32.738 336 194 9 145 452 125 456 1.20e-45 166
MS.gene93283.t1 AT3G16520 27.876 452 295 12 15 448 6 444 2.81e-45 164
MS.gene93283.t1 AT3G16520 27.876 452 295 12 15 448 6 444 2.91e-45 164
MS.gene93283.t1 AT3G46660 29.832 476 272 16 15 463 15 455 1.08e-44 162
MS.gene93283.t1 AT1G51210 27.876 452 258 17 15 438 21 432 1.66e-44 161
MS.gene93283.t1 AT1G22340 25.610 492 299 14 15 463 14 481 2.04e-44 162
MS.gene93283.t1 AT1G07250 27.197 478 307 15 15 463 7 472 2.46e-44 162
MS.gene93283.t1 AT5G05860 29.140 477 285 13 8 463 3 447 2.69e-44 161
MS.gene93283.t1 AT1G22360 25.966 466 272 15 15 435 11 448 3.60e-44 161
MS.gene93283.t1 AT4G36770 41.784 213 108 5 237 440 235 440 5.59e-44 160
MS.gene93283.t1 AT2G16890 27.140 479 302 16 15 465 10 469 7.71e-44 160
MS.gene93283.t1 AT2G29730 26.483 472 313 14 13 463 4 462 1.31e-43 160
MS.gene93283.t1 AT5G14860 27.992 493 287 17 16 465 10 477 1.54e-43 160
MS.gene93283.t1 AT2G36790 27.200 500 289 19 16 465 15 489 1.72e-43 160
MS.gene93283.t1 AT3G46700 36.434 258 144 6 210 463 203 444 7.52e-43 157
MS.gene93283.t1 AT3G46650 29.630 459 268 17 6 450 2 419 1.27e-42 156
MS.gene93283.t1 AT3G46680 36.364 253 144 6 210 460 209 446 1.54e-42 156
MS.gene93283.t1 AT4G15490 28.226 496 280 19 15 465 9 473 1.63e-42 157
MS.gene93283.t1 AT1G22380 27.039 466 275 17 15 439 14 455 2.25e-42 157
MS.gene93283.t1 AT5G59590 27.902 491 272 18 6 460 2 446 2.65e-42 156
MS.gene93283.t1 AT3G55700 33.028 327 183 11 153 463 144 450 5.51e-42 155
MS.gene93283.t1 AT1G22400 26.552 467 273 15 15 437 14 454 8.23e-42 155
MS.gene93283.t1 AT1G78270 27.115 461 279 15 16 439 15 455 9.48e-42 155
MS.gene93283.t1 AT1G22370 27.682 466 259 16 15 435 14 446 9.78e-42 155
MS.gene93283.t1 AT5G38010 27.255 499 269 19 6 460 2 450 1.73e-41 154
MS.gene93283.t1 AT3G53150 27.475 495 303 16 16 463 24 509 2.48e-41 154
MS.gene93283.t1 AT3G21800 26.707 498 300 18 11 465 2 477 3.62e-41 153
MS.gene93283.t1 AT2G18570 27.815 453 281 14 16 439 7 442 4.94e-41 153
MS.gene93283.t1 AT2G29740 33.564 289 175 9 178 460 194 471 7.44e-41 152
MS.gene93283.t1 AT5G59580 27.176 471 282 19 15 460 10 444 8.95e-41 152
MS.gene93283.t1 AT2G16890 28.883 412 248 14 15 400 10 402 1.15e-40 151
MS.gene93283.t1 AT3G46690 36.822 258 143 6 210 463 208 449 1.23e-40 151
MS.gene93283.t1 AT5G38040 34.028 288 163 9 179 460 180 446 1.88e-40 150
MS.gene93283.t1 AT3G21790 31.579 285 173 9 195 465 204 480 3.18e-40 151
MS.gene93283.t1 AT1G05680 37.561 205 114 3 257 461 260 450 3.37e-40 150
MS.gene93283.t1 AT4G15480 27.235 481 308 14 9 463 14 478 5.13e-40 150
MS.gene93283.t1 AT2G23250 28.105 459 294 14 17 463 1 435 5.49e-40 149
MS.gene93283.t1 AT2G30140 26.569 478 283 16 15 464 14 451 6.27e-40 149
MS.gene93283.t1 AT2G30140 26.722 479 282 16 15 464 14 452 6.85e-40 149
MS.gene93283.t1 AT5G12890 28.980 490 282 21 15 460 11 478 8.30e-40 150
MS.gene93283.t1 AT1G07260 26.025 488 309 15 10 463 2 471 1.01e-39 149
MS.gene93283.t1 AT2G43840 26.371 474 289 15 15 463 8 446 2.14e-39 148
MS.gene93283.t1 AT1G05675 37.561 205 114 3 257 461 260 450 2.53e-39 148
MS.gene93283.t1 AT2G29710 27.368 475 295 20 15 460 6 459 3.15e-39 148
MS.gene93283.t1 AT2G43840 34.579 214 126 3 250 463 247 446 3.55e-39 147
MS.gene93283.t1 AT5G05870 36.638 232 133 5 235 464 236 455 3.97e-39 147
MS.gene93283.t1 AT3G46720 37.391 230 122 5 237 463 230 440 4.74e-39 147
MS.gene93283.t1 AT2G18560 36.842 209 113 4 255 452 165 365 5.83e-39 145
MS.gene93283.t1 AT2G30150 27.273 484 276 17 15 465 14 454 6.45e-39 147
MS.gene93283.t1 AT2G23260 26.695 472 296 14 15 464 11 454 8.55e-39 146
MS.gene93283.t1 AT4G15500 27.521 476 289 17 15 460 10 459 1.18e-38 146
MS.gene93283.t1 AT1G01390 26.282 468 295 12 15 452 9 456 1.21e-38 146
MS.gene93283.t1 AT1G01420 35.814 215 126 4 250 457 251 460 1.25e-38 146
MS.gene93283.t1 AT2G31790 37.143 210 118 3 256 464 261 457 1.27e-38 146
MS.gene93283.t1 AT1G01420 35.814 215 126 4 250 457 254 463 1.49e-38 146
MS.gene93283.t1 AT1G01390 26.667 465 297 11 15 452 26 473 1.51e-38 146
MS.gene93283.t1 AT3G02100 28.081 495 283 16 4 463 3 459 2.42e-38 145
MS.gene93283.t1 AT1G06000 28.326 466 274 16 15 463 11 433 2.45e-38 145
MS.gene93283.t1 AT1G22360 24.464 466 267 15 15 435 11 436 2.86e-38 145
MS.gene93283.t1 AT2G30150 26.931 479 278 16 18 465 1 438 3.98e-38 144
MS.gene93283.t1 AT2G29750 26.477 491 293 16 15 463 9 473 7.03e-38 144
MS.gene93283.t1 AT3G21560 24.686 478 313 12 15 463 13 472 1.19e-37 144
MS.gene93283.t1 AT4G15260 30.824 279 178 7 195 463 81 354 1.58e-37 140
MS.gene93283.t1 AT3G21750 32.780 241 146 6 235 464 234 469 2.50e-37 142
MS.gene93283.t1 AT3G21760 37.344 241 138 7 235 465 245 482 2.77e-37 142
MS.gene93283.t1 AT2G43820 32.710 214 130 3 250 463 247 446 5.55e-37 141
MS.gene93283.t1 AT2G26480 35.424 271 143 9 204 463 196 445 1.15e-36 140
MS.gene93283.t1 AT1G05560 37.021 235 135 6 236 463 223 451 2.71e-36 140
MS.gene93283.t1 AT1G05560 37.021 235 135 6 236 463 273 501 3.61e-36 140
MS.gene93283.t1 AT5G05880 36.190 210 122 4 255 464 252 449 1.59e-35 137
MS.gene93283.t1 AT1G05530 28.157 483 277 14 16 463 7 454 4.78e-35 136
MS.gene93283.t1 AT4G15280 32.218 239 147 6 235 463 240 473 5.89e-35 136
MS.gene93283.t1 AT4G15280 32.218 239 147 6 235 463 272 505 6.26e-35 136
MS.gene93283.t1 AT1G07240 33.579 271 154 10 206 463 218 475 1.41e-34 135
MS.gene93283.t1 AT5G17050 35.577 208 117 3 232 439 242 432 1.51e-34 134
MS.gene93283.t1 AT3G55710 31.532 333 182 13 155 463 144 454 2.13e-34 134
MS.gene93283.t1 AT1G24100 34.906 212 119 5 257 465 265 460 4.10e-34 133
MS.gene93283.t1 AT5G05900 37.321 209 112 4 256 464 259 448 3.33e-33 130
MS.gene93283.t1 AT5G65550 29.520 271 174 7 173 442 187 441 5.21e-33 130
MS.gene93283.t1 AT5G49690 27.195 467 285 18 7 448 3 439 9.40e-33 129
MS.gene93283.t1 AT4G15550 35.398 226 137 6 237 460 252 470 1.04e-32 130
MS.gene93283.t1 AT3G21780 30.249 281 180 8 195 464 194 469 1.29e-32 129
MS.gene93283.t1 AT5G05890 34.286 210 126 4 255 464 256 453 3.32e-32 128
MS.gene93283.t1 AT2G36970 30.620 258 165 5 206 463 227 470 4.18e-31 125
MS.gene93283.t1 AT1G30530 32.374 278 160 8 170 442 175 429 8.23e-31 124
MS.gene93283.t1 AT1G22370 30.175 285 157 8 170 435 15 276 2.33e-30 120
MS.gene93283.t1 AT5G17040 33.333 210 121 4 232 439 121 313 1.05e-28 116
MS.gene93283.t1 AT5G17040 33.333 210 121 4 232 439 223 415 1.41e-28 117
MS.gene93283.t1 AT5G17030 33.333 210 121 4 232 439 239 431 2.02e-28 117
MS.gene93283.t1 AT2G28080 26.271 472 294 18 18 460 22 468 2.97e-27 114
MS.gene93283.t1 AT3G22250 32.558 215 118 6 241 447 257 452 3.48e-27 114
MS.gene93283.t1 AT4G14090 25.630 476 303 18 7 460 6 452 8.06e-26 110
MS.gene93283.t1 AT2G22590 25.813 492 281 19 15 463 16 466 2.11e-25 108
MS.gene93283.t1 AT5G37950 45.000 120 59 4 255 374 224 336 1.10e-24 105
MS.gene93283.t1 AT5G37950 45.000 120 59 4 255 374 230 342 1.24e-24 105
MS.gene93283.t1 AT4G27570 29.008 262 164 7 206 463 200 443 3.19e-24 105
MS.gene93283.t1 AT4G27560 28.626 262 165 7 206 463 200 443 3.96e-23 102
MS.gene93283.t1 AT1G64910 30.631 222 132 5 212 421 200 411 3.80e-22 99.0
MS.gene93283.t1 AT5G54060 23.770 488 313 17 1 459 1 458 3.41e-21 96.3
MS.gene93283.t1 AT5G53990 28.632 234 149 6 213 442 201 420 1.87e-20 94.0
MS.gene93283.t1 AT1G50580 24.434 442 293 15 16 443 8 422 2.07e-20 94.0
MS.gene93283.t1 AT3G29630 29.362 235 149 6 213 442 201 423 3.40e-20 93.2
MS.gene93283.t1 AT3G29630 28.889 225 144 5 224 442 183 397 5.55e-19 89.4
MS.gene93283.t1 AT5G54010 28.205 234 150 6 213 442 207 426 5.68e-19 89.7
MS.gene93283.t1 AT1G64920 28.750 240 149 7 212 443 200 425 6.13e-17 83.2
MS.gene93283.t1 AT4G34135 23.636 330 217 8 5 304 2 326 7.63e-17 82.0
MS.gene93283.t1 AT2G22930 24.576 236 160 5 212 443 200 421 1.99e-14 75.5
MS.gene93283.t1 AT4G09500 24.786 234 162 5 212 443 200 421 9.27e-14 73.6
MS.gene93283.t1 AT4G09500 25.946 185 127 3 260 442 219 395 3.96e-13 71.2
MS.gene93283.t1 AT4G01070 30.000 140 80 3 181 304 168 305 2.81e-11 65.1

Find 115 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGATGTTCCTTCTA+TGG 0.206414 1.3:-33946334 MS.gene93283:CDS
AAAGCAAGATAAAGTTCATT+TGG 0.300854 1.3:-33945981 MS.gene93283:CDS
TGGATGTTTGAAATGGAGTT+TGG 0.309843 1.3:+33946672 None:intergenic
AAATGCTATTGCTATGTCTA+TGG 0.315928 1.3:-33945545 MS.gene93283:CDS
TCAGTTATATATGTATCTTT+TGG 0.319665 1.3:-33946060 MS.gene93283:CDS
GAAATTGAACAGATTGCAAC+TGG 0.321867 1.3:-33946012 MS.gene93283:CDS
TGGGGTTTGTTGTGAGAGAT+TGG 0.327888 1.3:-33945864 MS.gene93283:CDS
GATACATATATAACTGAGTT+TGG 0.332257 1.3:+33946066 None:intergenic
GAACTTTGAAGTGATGAAAA+TGG 0.343793 1.3:+33946652 None:intergenic
AAACAAATTTCCTTCTCATA+TGG 0.344813 1.3:-33946592 MS.gene93283:CDS
GTTATGAAAACACAGTTTCT+TGG 0.362092 1.3:+33945712 None:intergenic
CGGAGTTTCTCGTATGGAAA+TGG 0.376259 1.3:-33945515 MS.gene93283:CDS
TTCTTCTTCTCAATGGTAAG+AGG 0.385858 1.3:+33946138 None:intergenic
TTCAATTTCTTCATCTGTCA+AGG 0.395467 1.3:+33946026 None:intergenic
CCAACCTTGGACACGATTTG+TGG 0.397459 1.3:+33946698 None:intergenic
TGCATAGGCCATGCTGCTAT+TGG 0.399298 1.3:+33945745 None:intergenic
TGAATCTTTCTTCTTCTCAA+TGG 0.406758 1.3:+33946131 None:intergenic
AAGCAAGATAAAGTTCATTT+GGG 0.407817 1.3:-33945980 MS.gene93283:CDS
ATAACACAAGTGTTAAAGAT+TGG 0.408364 1.3:-33945694 MS.gene93283:CDS
TTGGTTTGGTTGTGATGGAT+TGG 0.410463 1.3:-33945675 MS.gene93283:CDS
GAAGAGAGAGTTGAAGGAAT+GGG 0.413081 1.3:-33945883 MS.gene93283:CDS
ATATTGAGAATGTTGTTAGA+AGG 0.414109 1.3:-33945621 MS.gene93283:CDS
GACATATTTGATGGAAATGA+AGG 0.416310 1.3:-33945934 MS.gene93283:CDS
TACTTTAGAGAGCATTTCAA+TGG 0.416904 1.3:-33945773 MS.gene93283:CDS
CTCAATGGTAAGAGGGTTGA+AGG 0.419504 1.3:+33946146 None:intergenic
TGGTTTGGTTGTGATGGATT+GGG 0.419694 1.3:-33945674 MS.gene93283:CDS
CACTTCCATTTGGGAGAAAG+TGG 0.420202 1.3:-33946382 MS.gene93283:CDS
GAATGTTGTTAGAAGGTTGA+TGG 0.422088 1.3:-33945614 MS.gene93283:CDS
GGGTTTGAAGAGAGAGTTGA+AGG 0.426802 1.3:-33945889 MS.gene93283:CDS
ATGAAAATGGATGTTTGAAA+TGG 0.430739 1.3:+33946665 None:intergenic
CTCTCTATCAACTCCAAGTA+AGG 0.431459 1.3:+33946204 None:intergenic
GATAAAGGAGACATATTTGA+TGG 0.433480 1.3:-33945943 MS.gene93283:CDS
ACAAGTGTTAAAGATTGGTT+TGG 0.437278 1.3:-33945689 MS.gene93283:CDS
CTCATAAACCCTCCTGTTGA+AGG 0.439840 1.3:+33945814 None:intergenic
AAGAGAGAGTTGAAGGAATG+GGG 0.440212 1.3:-33945882 MS.gene93283:CDS
AAGCATCCATCCTCCATAGA+AGG 0.444404 1.3:+33946321 None:intergenic
AGTCATTGAAAGTCCTTACT+TGG 0.449851 1.3:-33946217 MS.gene93283:CDS
CACAAATCGTGTCCAAGGTT+GGG 0.450663 1.3:-33946697 MS.gene93283:CDS
ATTCTAAGCCACCCTTCAAC+AGG 0.453025 1.3:-33945826 MS.gene93283:CDS
GGTGGCTTAGAATTTCCAAC+TGG 0.456955 1.3:+33945836 None:intergenic
TGATTCAAATGGCCTTGTGC+TGG 0.461900 1.3:+33946801 None:intergenic
TGTGAAGAGGCTAGAAAAGA+AGG 0.463650 1.3:+33946567 None:intergenic
TGTGATTCATGATAGTCTAA+TGG 0.466885 1.3:-33946484 MS.gene93283:CDS
TCTGCATTTGGGTTAGGAGG+AGG 0.476547 1.3:+33946615 None:intergenic
AGTGTAGAAGTTGATTCAAA+TGG 0.477475 1.3:+33946790 None:intergenic
TCACTTGCAGTAAGAAGCAT+TGG 0.487565 1.3:-33946179 MS.gene93283:CDS
CCACAAATCGTGTCCAAGGT+TGG 0.487605 1.3:-33946698 MS.gene93283:CDS
ACTTTAGAGAGCATTTCAAT+GGG 0.492782 1.3:-33945772 MS.gene93283:CDS
TGAAAACACAGTTTCTTGGC+TGG 0.493749 1.3:+33945716 None:intergenic
GAAGTGCCAACATAGTGAAC+AGG 0.494136 1.3:+33946738 None:intergenic
TCTTCTTCTCAATGGTAAGA+GGG 0.495022 1.3:+33946139 None:intergenic
TGAAGAGAGAGTTGAAGGAA+TGG 0.495173 1.3:-33945884 MS.gene93283:CDS
GGGGTTTGTTGTGAGAGATT+GGG 0.496692 1.3:-33945863 MS.gene93283:CDS
TGTGGCTTGACGGTTGTGTA+TGG 0.498480 1.3:+33946716 None:intergenic
AAAAGAGGTGAACTTGCAAA+AGG 0.500030 1.3:-33945910 MS.gene93283:CDS
AACATACCTGTTCACTATGT+TGG 0.503982 1.3:-33946744 MS.gene93283:CDS
CAGTAAGAAGCATTGGGCAG+TGG 0.505058 1.3:-33946172 MS.gene93283:CDS
TTGGGCTAAAAGACATGAGT+TGG 0.507135 1.3:-33945656 MS.gene93283:CDS
TGAACAGATTGCAACTGGGT+TGG 0.509228 1.3:-33946007 MS.gene93283:CDS
GGACACGATTTGTGGCTTGA+CGG 0.509244 1.3:+33946706 None:intergenic
TGAGAAGAAGAAAGATTCAA+AGG 0.511117 1.3:-33946127 MS.gene93283:CDS
AAACCAAGTGGTGGTTATTG+TGG 0.512648 1.3:-33946832 MS.gene93283:CDS
AAAGATTGGTTTGGTTGTGA+TGG 0.513574 1.3:-33945680 MS.gene93283:CDS
TGGAGTTTGGATCCCAACCT+TGG 0.514412 1.3:+33946685 None:intergenic
GTGTTGAGAGATGCTGATAA+AGG 0.522956 1.3:-33945958 MS.gene93283:CDS
GAGAGATTGGGCACCCCAGT+TGG 0.524518 1.3:-33945851 MS.gene93283:CDS
GAGAAGAAGAAAGATTCAAA+GGG 0.527233 1.3:-33946126 MS.gene93283:CDS
GAATTCTATGCATTAAGTGA+TGG 0.537800 1.3:-33946261 MS.gene93283:CDS
TTAGGAGGAGGTGAAACAAA+GGG 0.545800 1.3:+33946627 None:intergenic
ATAATATGCGAGCTTTCAAT+CGG 0.549850 1.3:+33946351 None:intergenic
GATGGAAATGAAGGGAAAAG+AGG 0.550269 1.3:-33945925 MS.gene93283:CDS
GGTTTATGAGTCATTGTGGA+TGG 0.552414 1.3:-33945801 MS.gene93283:CDS
AATTCTATGCATTAAGTGAT+GGG 0.555471 1.3:-33946260 MS.gene93283:CDS
TAGAAGGTTGATGGATACAA+AGG 0.557592 1.3:-33945605 MS.gene93283:CDS
GTTAGGAGGAGGTGAAACAA+AGG 0.561610 1.3:+33946626 None:intergenic
AAATGGCCTTGTGCTGGGAA+AGG 0.563121 1.3:+33946807 None:intergenic
TGAAGGCGGAGTTTCTCGTA+TGG 0.566340 1.3:-33945521 MS.gene93283:CDS
GATTCAAATGGCCTTGTGCT+GGG 0.566341 1.3:+33946802 None:intergenic
CACTTGCAGTAAGAAGCATT+GGG 0.567603 1.3:-33946178 MS.gene93283:CDS
AGTAAGAAGCATTGGGCAGT+GGG 0.570505 1.3:-33946171 MS.gene93283:CDS
ATTGCTATGTCTATGGATGA+AGG 0.578614 1.3:-33945538 MS.gene93283:CDS
ATATGCGAGCTTTCAATCGG+AGG 0.580434 1.3:+33946354 None:intergenic
GATGTTCCTTCTATGGAGGA+TGG 0.581305 1.3:-33946327 MS.gene93283:CDS
AAAGAAGGAACCATATGAGA+AGG 0.581429 1.3:+33946582 None:intergenic
AGAAGAAAGATTCAAAGGGT+AGG 0.582116 1.3:-33946122 MS.gene93283:CDS
CAAGCCACAAATCGTGTCCA+AGG 0.586173 1.3:-33946702 MS.gene93283:CDS
TATTGATGTTCCTTCTATGG+AGG 0.586205 1.3:-33946331 MS.gene93283:CDS
CTAAGCCACCCTTCAACAGG+AGG 0.589679 1.3:-33945823 MS.gene93283:CDS
ACTTCCATTTGGGAGAAAGT+GGG 0.590924 1.3:-33946381 MS.gene93283:CDS
AAAGAGGTGAACTTGCAAAA+GGG 0.594152 1.3:-33945909 MS.gene93283:CDS
CTTGGCTGGTCAGAATGCAT+AGG 0.594768 1.3:+33945730 None:intergenic
GTGGTACCTTTCCCAGCACA+AGG 0.595372 1.3:-33946813 MS.gene93283:CDS
AAAGGGTAGGCATTCATGCA+TGG 0.596424 1.3:-33946109 MS.gene93283:CDS
TGATAGTCTAATGGCATCAG+TGG 0.597756 1.3:-33946475 MS.gene93283:CDS
TTTAGAGAGCATTTCAATGG+GGG 0.598140 1.3:-33945770 MS.gene93283:CDS
TCATAAACCCTCCTGTTGAA+GGG 0.598229 1.3:+33945815 None:intergenic
GTAGGCATTCATGCATGGAA+TGG 0.601849 1.3:-33946104 MS.gene93283:CDS
AATTTCTTCATCTGTCAAGG+TGG 0.604461 1.3:+33946029 None:intergenic
AGCTCACCAATGGCTTCCAA+TGG 0.605157 1.3:-33946870 None:intergenic
TTCACATCTTCGTGAGCCAG+TGG 0.606950 1.3:-33946550 MS.gene93283:CDS
GGAGGGTTTATGAGTCATTG+TGG 0.608894 1.3:-33945805 MS.gene93283:CDS
ACATATTTGATGGAAATGAA+GGG 0.609450 1.3:-33945933 MS.gene93283:CDS
AGGTTGATGGATACAAAGGA+AGG 0.624480 1.3:-33945601 MS.gene93283:CDS
TAAGCCACCCTTCAACAGGA+GGG 0.627491 1.3:-33945822 MS.gene93283:CDS
TAAACCCTCCTGTTGAAGGG+TGG 0.642797 1.3:+33945818 None:intergenic
GATTGCATGAGTTCTACCAC+TGG 0.642870 1.3:+33946534 None:intergenic
GTACCACAATAACCACCACT+TGG 0.645127 1.3:+33946829 None:intergenic
TCAATGGTAAGAGGGTTGAA+GGG 0.646857 1.3:+33946147 None:intergenic
TGGCTCACGAAGATGTGAAG+AGG 0.654412 1.3:+33946554 None:intergenic
GTGGCTTAGAATTTCCAACT+GGG 0.655159 1.3:+33945837 None:intergenic
CTTTAGAGAGCATTTCAATG+GGG 0.668610 1.3:-33945771 MS.gene93283:CDS
TGGCTTAGAATTTCCAACTG+GGG 0.674557 1.3:+33945838 None:intergenic
AAATTGAACAGATTGCAACT+GGG 0.679302 1.3:-33946011 MS.gene93283:CDS
GCTATGTCTATGGATGAAGG+CGG 0.726454 1.3:-33945535 MS.gene93283:CDS
GGAGGAGGTGAAACAAAGGG+AGG 0.734329 1.3:+33946630 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAGTTATATATGTATCTTT+TGG - chr1.3:33946287-33946306 MS.gene93283:CDS 20.0%
! AAACAAATCAAAAAACCAAG+TGG - chr1.3:33945503-33945522 MS.gene93283:CDS 25.0%
! AAACAAATTTCCTTCTCATA+TGG - chr1.3:33945755-33945774 MS.gene93283:CDS 25.0%
! AAAGCAAGATAAAGTTCATT+TGG - chr1.3:33946366-33946385 MS.gene93283:CDS 25.0%
! AAGCAAGATAAAGTTCATTT+GGG - chr1.3:33946367-33946386 MS.gene93283:CDS 25.0%
! AATTCTATGCATTAAGTGAT+GGG - chr1.3:33946087-33946106 MS.gene93283:CDS 25.0%
! ACATATTTGATGGAAATGAA+GGG - chr1.3:33946414-33946433 MS.gene93283:CDS 25.0%
! ATAACACAAGTGTTAAAGAT+TGG - chr1.3:33946653-33946672 MS.gene93283:CDS 25.0%
! ATATTGAGAATGTTGTTAGA+AGG - chr1.3:33946726-33946745 MS.gene93283:CDS 25.0%
! ATGAAAATGGATGTTTGAAA+TGG + chr1.3:33945685-33945704 None:intergenic 25.0%
! GATACATATATAACTGAGTT+TGG + chr1.3:33946284-33946303 None:intergenic 25.0%
! TATTATTGATGTTCCTTCTA+TGG - chr1.3:33946013-33946032 MS.gene93283:CDS 25.0%
!! ACTTTCATCTGTTTTCAAAA+GGG - chr1.3:33945836-33945855 MS.gene93283:CDS 25.0%
!! TACAATTTTCACTTCCATTT+GGG - chr1.3:33945956-33945975 MS.gene93283:CDS 25.0%
!! TTACAATTTTCACTTCCATT+TGG - chr1.3:33945955-33945974 MS.gene93283:CDS 25.0%
!!! CTTGGTTTTTTGATTTGTTT+TGG + chr1.3:33945503-33945522 None:intergenic 25.0%
!!! GAAATTTGTTTTCTGCATTT+GGG + chr1.3:33945746-33945765 None:intergenic 25.0%
AAATGCTATTGCTATGTCTA+TGG - chr1.3:33946802-33946821 MS.gene93283:CDS 30.0%
AAATTGAACAGATTGCAACT+GGG - chr1.3:33946336-33946355 MS.gene93283:CDS 30.0%
ATAATATGCGAGCTTTCAAT+CGG + chr1.3:33945999-33946018 None:intergenic 30.0%
GAATTCTATGCATTAAGTGA+TGG - chr1.3:33946086-33946105 MS.gene93283:CDS 30.0%
GACATATTTGATGGAAATGA+AGG - chr1.3:33946413-33946432 MS.gene93283:CDS 30.0%
GAGAAGAAGAAAGATTCAAA+GGG - chr1.3:33946221-33946240 MS.gene93283:CDS 30.0%
GATAAAGGAGACATATTTGA+TGG - chr1.3:33946404-33946423 MS.gene93283:CDS 30.0%
GTTATGAAAACACAGTTTCT+TGG + chr1.3:33946638-33946657 None:intergenic 30.0%
TGAATCTTTCTTCTTCTCAA+TGG + chr1.3:33946219-33946238 None:intergenic 30.0%
TGAGAAGAAGAAAGATTCAA+AGG - chr1.3:33946220-33946239 MS.gene93283:CDS 30.0%
TGTGATTCATGATAGTCTAA+TGG - chr1.3:33945863-33945882 MS.gene93283:CDS 30.0%
TTCAATTTCTTCATCTGTCA+AGG + chr1.3:33946324-33946343 None:intergenic 30.0%
! ACAAGTGTTAAAGATTGGTT+TGG - chr1.3:33946658-33946677 MS.gene93283:CDS 30.0%
! AGTGTAGAAGTTGATTCAAA+TGG + chr1.3:33945560-33945579 None:intergenic 30.0%
! CACTTTCATCTGTTTTCAAA+AGG - chr1.3:33945835-33945854 MS.gene93283:CDS 30.0%
!! ACTTTAGAGAGCATTTCAAT+GGG - chr1.3:33946575-33946594 MS.gene93283:CDS 30.0%
!! GAACTTTGAAGTGATGAAAA+TGG + chr1.3:33945698-33945717 None:intergenic 30.0%
!! GGAAATTTGTTTTCTGCATT+TGG + chr1.3:33945747-33945766 None:intergenic 30.0%
!! TACTTTAGAGAGCATTTCAA+TGG - chr1.3:33946574-33946593 MS.gene93283:CDS 30.0%
!!! TTTTGATTTGTTTTGGCCAT+TGG + chr1.3:33945496-33945515 None:intergenic 30.0%
AAAAGAGGTGAACTTGCAAA+AGG - chr1.3:33946437-33946456 MS.gene93283:CDS 35.0%
AAAGAAGGAACCATATGAGA+AGG + chr1.3:33945768-33945787 None:intergenic 35.0%
AAAGAGGTGAACTTGCAAAA+GGG - chr1.3:33946438-33946457 MS.gene93283:CDS 35.0%
AACATACCTGTTCACTATGT+TGG - chr1.3:33945603-33945622 MS.gene93283:CDS 35.0%
AATTTCTTCATCTGTCAAGG+TGG + chr1.3:33946321-33946340 None:intergenic 35.0%
AGAAGAAAGATTCAAAGGGT+AGG - chr1.3:33946225-33946244 MS.gene93283:CDS 35.0%
AGTCATTGAAAGTCCTTACT+TGG - chr1.3:33946130-33946149 MS.gene93283:CDS 35.0%
ATTGCTATGTCTATGGATGA+AGG - chr1.3:33946809-33946828 MS.gene93283:CDS 35.0%
CAAATCAAAAAACCAAGTGG+TGG - chr1.3:33945506-33945525 MS.gene93283:CDS 35.0%
GAAATTGAACAGATTGCAAC+TGG - chr1.3:33946335-33946354 MS.gene93283:CDS 35.0%
GAATGTTGTTAGAAGGTTGA+TGG - chr1.3:33946733-33946752 MS.gene93283:CDS 35.0%
TATTGATGTTCCTTCTATGG+AGG - chr1.3:33946016-33946035 MS.gene93283:CDS 35.0%
TCTTCTTCTCAATGGTAAGA+GGG + chr1.3:33946211-33946230 None:intergenic 35.0%
TTCTTCTTCTCAATGGTAAG+AGG + chr1.3:33946212-33946231 None:intergenic 35.0%
! TGGATGTTTGAAATGGAGTT+TGG + chr1.3:33945678-33945697 None:intergenic 35.0%
!! AAAGATTGGTTTGGTTGTGA+TGG - chr1.3:33946667-33946686 MS.gene93283:CDS 35.0%
!! CTTTAGAGAGCATTTCAATG+GGG - chr1.3:33946576-33946595 MS.gene93283:CDS 35.0%
!! TAGAAGGTTGATGGATACAA+AGG - chr1.3:33946742-33946761 MS.gene93283:CDS 35.0%
!! TTGTTTTCTGCATTTGGGTT+AGG + chr1.3:33945741-33945760 None:intergenic 35.0%
!! TTTAGAGAGCATTTCAATGG+GGG - chr1.3:33946577-33946596 MS.gene93283:CDS 35.0%
AAACCAAGTGGTGGTTATTG+TGG - chr1.3:33945515-33945534 MS.gene93283:CDS 40.0%
AAGAGAGAGTTGAAGGAATG+GGG - chr1.3:33946465-33946484 MS.gene93283:CDS 40.0%
ACTTCCATTTGGGAGAAAGT+GGG - chr1.3:33945966-33945985 MS.gene93283:CDS 40.0%
CTCTCTATCAACTCCAAGTA+AGG + chr1.3:33946146-33946165 None:intergenic 40.0%
GAAGAGAGAGTTGAAGGAAT+GGG - chr1.3:33946464-33946483 MS.gene93283:CDS 40.0%
GATGGAAATGAAGGGAAAAG+AGG - chr1.3:33946422-33946441 MS.gene93283:CDS 40.0%
GGTTTATGAGTCATTGTGGA+TGG - chr1.3:33946546-33946565 MS.gene93283:CDS 40.0%
GTGGCTTAGAATTTCCAACT+GGG + chr1.3:33946513-33946532 None:intergenic 40.0%
GTGTTGAGAGATGCTGATAA+AGG - chr1.3:33946389-33946408 MS.gene93283:CDS 40.0%
TCAATGGTAAGAGGGTTGAA+GGG + chr1.3:33946203-33946222 None:intergenic 40.0%
TCATAAACCCTCCTGTTGAA+GGG + chr1.3:33946535-33946554 None:intergenic 40.0%
TGAAAACACAGTTTCTTGGC+TGG + chr1.3:33946634-33946653 None:intergenic 40.0%
TGAAGAGAGAGTTGAAGGAA+TGG - chr1.3:33946463-33946482 MS.gene93283:CDS 40.0%
TGATAGTCTAATGGCATCAG+TGG - chr1.3:33945872-33945891 MS.gene93283:CDS 40.0%
TGGCTTAGAATTTCCAACTG+GGG + chr1.3:33946512-33946531 None:intergenic 40.0%
TGTGAAGAGGCTAGAAAAGA+AGG + chr1.3:33945783-33945802 None:intergenic 40.0%
TTAGGAGGAGGTGAAACAAA+GGG + chr1.3:33945723-33945742 None:intergenic 40.0%
TTGGGCTAAAAGACATGAGT+TGG - chr1.3:33946691-33946710 MS.gene93283:CDS 40.0%
! TCACTTGCAGTAAGAAGCAT+TGG - chr1.3:33946168-33946187 MS.gene93283:CDS 40.0%
! TTTTCCCACTTTCTCCCAAA+TGG + chr1.3:33945973-33945992 None:intergenic 40.0%
!! AGGTTGATGGATACAAAGGA+AGG - chr1.3:33946746-33946765 MS.gene93283:CDS 40.0%
!! CACTTGCAGTAAGAAGCATT+GGG - chr1.3:33946169-33946188 MS.gene93283:CDS 40.0%
!! TGGTTTGGTTGTGATGGATT+GGG - chr1.3:33946673-33946692 MS.gene93283:CDS 40.0%
!! TTGGTTTGGTTGTGATGGAT+TGG - chr1.3:33946672-33946691 MS.gene93283:CDS 40.0%
!! TTTTCTGCATTTGGGTTAGG+AGG + chr1.3:33945738-33945757 None:intergenic 40.0%
AAAGGGTAGGCATTCATGCA+TGG - chr1.3:33946238-33946257 MS.gene93283:CDS 45.0%
AAGCATCCATCCTCCATAGA+AGG + chr1.3:33946029-33946048 None:intergenic 45.0%
ATATGCGAGCTTTCAATCGG+AGG + chr1.3:33945996-33946015 None:intergenic 45.0%
ATTCTAAGCCACCCTTCAAC+AGG - chr1.3:33946521-33946540 MS.gene93283:CDS 45.0%
CACAAATCGTGTCCAAGGTT+GGG - chr1.3:33945650-33945669 MS.gene93283:CDS 45.0%
CACTTCCATTTGGGAGAAAG+TGG - chr1.3:33945965-33945984 MS.gene93283:CDS 45.0%
CGGAGTTTCTCGTATGGAAA+TGG - chr1.3:33946832-33946851 MS.gene93283:CDS 45.0%
CTCAATGGTAAGAGGGTTGA+AGG + chr1.3:33946204-33946223 None:intergenic 45.0%
CTCATAAACCCTCCTGTTGA+AGG + chr1.3:33946536-33946555 None:intergenic 45.0%
GATGTTCCTTCTATGGAGGA+TGG - chr1.3:33946020-33946039 MS.gene93283:CDS 45.0%
GATTGCATGAGTTCTACCAC+TGG + chr1.3:33945816-33945835 None:intergenic 45.0%
GCTATGTCTATGGATGAAGG+CGG - chr1.3:33946812-33946831 MS.gene93283:CDS 45.0%
GGAGGGTTTATGAGTCATTG+TGG - chr1.3:33946542-33946561 MS.gene93283:CDS 45.0%
GGGTTTGAAGAGAGAGTTGA+AGG - chr1.3:33946458-33946477 MS.gene93283:CDS 45.0%
GGTGGCTTAGAATTTCCAAC+TGG + chr1.3:33946514-33946533 None:intergenic 45.0%
GTACCACAATAACCACCACT+TGG + chr1.3:33945521-33945540 None:intergenic 45.0%
GTAGGCATTCATGCATGGAA+TGG - chr1.3:33946243-33946262 MS.gene93283:CDS 45.0%
GTTAGGAGGAGGTGAAACAA+AGG + chr1.3:33945724-33945743 None:intergenic 45.0%
TGAACAGATTGCAACTGGGT+TGG - chr1.3:33946340-33946359 MS.gene93283:CDS 45.0%
! GAAGTGCCAACATAGTGAAC+AGG + chr1.3:33945612-33945631 None:intergenic 45.0%
!! AGTAAGAAGCATTGGGCAGT+GGG - chr1.3:33946176-33946195 MS.gene93283:CDS 45.0%
!! GATTCAAATGGCCTTGTGCT+GGG + chr1.3:33945548-33945567 None:intergenic 45.0%
!! GGGGTTTGTTGTGAGAGATT+GGG - chr1.3:33946484-33946503 MS.gene93283:CDS 45.0%
!! TGATTCAAATGGCCTTGTGC+TGG + chr1.3:33945549-33945568 None:intergenic 45.0%
!! TGGGGTTTGTTGTGAGAGAT+TGG - chr1.3:33946483-33946502 MS.gene93283:CDS 45.0%
CAAGCCACAAATCGTGTCCA+AGG - chr1.3:33945645-33945664 MS.gene93283:CDS 50.0%
CCAACCTTGGACACGATTTG+TGG + chr1.3:33945652-33945671 None:intergenic 50.0%
CCACAAATCGTGTCCAAGGT+TGG - chr1.3:33945649-33945668 MS.gene93283:CDS 50.0%
GGACACGATTTGTGGCTTGA+CGG + chr1.3:33945644-33945663 None:intergenic 50.0%
TAAACCCTCCTGTTGAAGGG+TGG + chr1.3:33946532-33946551 None:intergenic 50.0%
TAAGCCACCCTTCAACAGGA+GGG - chr1.3:33946525-33946544 MS.gene93283:CDS 50.0%
TGAAGGCGGAGTTTCTCGTA+TGG - chr1.3:33946826-33946845 MS.gene93283:CDS 50.0%
TGCATAGGCCATGCTGCTAT+TGG + chr1.3:33946605-33946624 None:intergenic 50.0%
TGGAGTTTGGATCCCAACCT+TGG + chr1.3:33945665-33945684 None:intergenic 50.0%
TGGCTCACGAAGATGTGAAG+AGG + chr1.3:33945796-33945815 None:intergenic 50.0%
TGTGGCTTGACGGTTGTGTA+TGG + chr1.3:33945634-33945653 None:intergenic 50.0%
TTCACATCTTCGTGAGCCAG+TGG - chr1.3:33945797-33945816 MS.gene93283:CDS 50.0%
! CTTGGCTGGTCAGAATGCAT+AGG + chr1.3:33946620-33946639 None:intergenic 50.0%
! TCTGCATTTGGGTTAGGAGG+AGG + chr1.3:33945735-33945754 None:intergenic 50.0%
!! AAATGGCCTTGTGCTGGGAA+AGG + chr1.3:33945543-33945562 None:intergenic 50.0%
!! CAGTAAGAAGCATTGGGCAG+TGG - chr1.3:33946175-33946194 MS.gene93283:CDS 50.0%
CTAAGCCACCCTTCAACAGG+AGG - chr1.3:33946524-33946543 MS.gene93283:CDS 55.0%
GGAGGAGGTGAAACAAAGGG+AGG + chr1.3:33945720-33945739 None:intergenic 55.0%
GTGGTACCTTTCCCAGCACA+AGG - chr1.3:33945534-33945553 MS.gene93283:CDS 55.0%
GAGAGATTGGGCACCCCAGT+TGG - chr1.3:33946496-33946515 MS.gene93283:CDS 60.0%
!! TGGGGGTGCCAATAGCAGCA+TGG - chr1.3:33946594-33946613 MS.gene93283:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 33945486 33946883 33945486 ID=MS.gene93283
chr1.3 mRNA 33945486 33946883 33945486 ID=MS.gene93283.t1;Parent=MS.gene93283
chr1.3 exon 33945486 33946883 33945486 ID=MS.gene93283.t1.exon1;Parent=MS.gene93283.t1
chr1.3 CDS 33945486 33946883 33945486 ID=cds.MS.gene93283.t1;Parent=MS.gene93283.t1
Gene Sequence

>MS.gene93283

ATGGCTTCCAATGGCCAAAACAAATCAAAAAACCAAGTGGTGGTTATTGTGGTACCTTTCCCAGCACAAGGCCATTTGAATCAACTTCTACACTTCTCACGCTTAATCTTATCACACAACATACCTGTTCACTATGTTGGCACTTCCATACACAACCGTCAAGCCACAAATCGTGTCCAAGGTTGGGATCCAAACTCCATTTCAAACATCCATTTTCATCACTTCAAAGTTCCTCCCTTTGTTTCACCTCCTCCTAACCCAAATGCAGAAAACAAATTTCCTTCTCATATGGTTCCTTCTTTTCTAGCCTCTTCACATCTTCGTGAGCCAGTGGTAGAACTCATGCAATCACTTTCATCTGTTTTCAAAAGGGTTGTTGTGATTCATGATAGTCTAATGGCATCAGTGGTACAAGATGCTAAAAACATAGAAAATGTTGAGAATTACTCATTTCTCAGTACATGTGCTTTTACAATTTTCACTTCCATTTGGGAGAAAGTGGGAAAACCTCCGATTGAAAGCTCGCATATTATTGATGTTCCTTCTATGGAGGATGGATGCTTCACAGCTGAAATCAGTGACTTCTTTAATGCACAAAAAGAATTCTATGCATTAAGTGATGGGAGCATCTACAATACAAGCAGAGTCATTGAAAGTCCTTACTTGGAGTTGATAGAGAGAATCACTTGCAGTAAGAAGCATTGGGCAGTGGGACCCTTCAACCCTCTTACCATTGAGAAGAAGAAAGATTCAAAGGGTAGGCATTCATGCATGGAATGGCTTGATAAACAAGAACCAAACTCAGTTATATATGTATCTTTTGGAACAACAACCACCTTGACAGATGAAGAAATTGAACAGATTGCAACTGGGTTGGAACAAAGCAAGATAAAGTTCATTTGGGTGTTGAGAGATGCTGATAAAGGAGACATATTTGATGGAAATGAAGGGAAAAGAGGTGAACTTGCAAAAGGGTTTGAAGAGAGAGTTGAAGGAATGGGGTTTGTTGTGAGAGATTGGGCACCCCAGTTGGAAATTCTAAGCCACCCTTCAACAGGAGGGTTTATGAGTCATTGTGGATGGAACTCTACTTTAGAGAGCATTTCAATGGGGGTGCCAATAGCAGCATGGCCTATGCATTCTGACCAGCCAAGAAACTGTGTTTTCATAACACAAGTGTTAAAGATTGGTTTGGTTGTGATGGATTGGGCTAAAAGACATGAGTTGGTTACTGCTTCAGATATTGAGAATGTTGTTAGAAGGTTGATGGATACAAAGGAAGGTGATGAGATGCGAGAGAGAGCAATGAAACTTAAAAATGCTATTGCTATGTCTATGGATGAAGGCGGAGTTTCTCGTATGGAAATGGATTCTTTCATCGCTCATATCACTCGATAA

Protein sequence

>MS.gene93283.t1

MASNGQNKSKNQVVVIVVPFPAQGHLNQLLHFSRLILSHNIPVHYVGTSIHNRQATNRVQGWDPNSISNIHFHHFKVPPFVSPPPNPNAENKFPSHMVPSFLASSHLREPVVELMQSLSSVFKRVVVIHDSLMASVVQDAKNIENVENYSFLSTCAFTIFTSIWEKVGKPPIESSHIIDVPSMEDGCFTAEISDFFNAQKEFYALSDGSIYNTSRVIESPYLELIERITCSKKHWAVGPFNPLTIEKKKDSKGRHSCMEWLDKQEPNSVIYVSFGTTTTLTDEEIEQIATGLEQSKIKFIWVLRDADKGDIFDGNEGKRGELAKGFEERVEGMGFVVRDWAPQLEILSHPSTGGFMSHCGWNSTLESISMGVPIAAWPMHSDQPRNCVFITQVLKIGLVVMDWAKRHELVTASDIENVVRRLMDTKEGDEMRERAMKLKNAIAMSMDEGGVSRMEMDSFIAHITR