AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055303


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055303.t1 MTR_7g061550 99.721 359 1 0 1 359 1 359 0.0 734
MS.gene055303.t1 MTR_0140s0030 39.474 114 67 1 10 123 18 129 4.41e-24 101
MS.gene055303.t1 MTR_0489s0020 39.474 114 67 1 10 123 18 129 4.41e-24 101
MS.gene055303.t1 MTR_2g096380 37.879 132 71 3 10 140 11 132 3.73e-23 96.7
MS.gene055303.t1 MTR_6g012180 44.330 97 52 1 10 106 17 111 3.81e-23 98.6
MS.gene055303.t1 MTR_7g017260 45.745 94 51 0 10 103 30 123 3.99e-23 97.8
MS.gene055303.t1 MTR_7g087130 38.168 131 74 3 10 140 17 140 6.45e-23 98.2
MS.gene055303.t1 MTR_5g029840 45.833 96 50 1 10 105 17 110 1.04e-22 97.8
MS.gene055303.t1 MTR_3g461490 35.252 139 82 3 3 141 10 140 1.28e-22 97.1
MS.gene055303.t1 MTR_3g052430 42.308 104 58 1 10 113 46 147 1.47e-22 99.4
MS.gene055303.t1 MTR_1g110460 42.991 107 59 1 7 113 28 132 1.71e-22 96.7
MS.gene055303.t1 MTR_7g010210 39.316 117 67 2 10 126 17 129 2.56e-22 96.3
MS.gene055303.t1 MTR_7g010210 29.016 193 114 3 10 183 17 205 2.92e-22 95.1
MS.gene055303.t1 MTR_1g086530 40.909 110 63 1 10 119 38 145 4.16e-22 94.7
MS.gene055303.t1 MTR_5g079120 44.554 101 54 1 10 110 66 164 1.22e-21 94.0
MS.gene055303.t1 MTR_3g052450 40.385 104 60 1 10 113 45 146 1.65e-21 95.9
MS.gene055303.t1 MTR_5g078910 45.545 101 53 1 10 110 12 110 1.81e-21 93.6
MS.gene055303.t1 MTR_3g039990 28.788 198 123 4 10 194 18 210 2.01e-21 93.6
MS.gene055303.t1 MTR_1g100653 41.818 110 62 1 7 116 14 121 2.47e-21 93.2
MS.gene055303.t1 MTR_8g006470 48.421 95 46 2 10 103 15 107 4.53e-21 92.0
MS.gene055303.t1 MTR_8g060940 44.792 96 51 1 10 105 12 105 6.01e-21 90.9
MS.gene055303.t1 MTR_1g073170 42.982 114 59 3 5 114 17 128 8.80e-21 90.9
MS.gene055303.t1 MTR_5g078950 45.455 99 52 1 7 105 9 105 1.10e-20 90.5
MS.gene055303.t1 MTR_5g079290 44.554 101 54 1 10 110 22 120 1.30e-20 90.5
MS.gene055303.t1 MTR_7g035075 38.889 108 64 1 10 117 19 124 1.99e-20 88.6
MS.gene055303.t1 MTR_0001s0360 43.564 101 55 1 10 110 12 110 2.38e-20 89.4
MS.gene055303.t1 MTR_5g078860 45.833 96 50 1 10 105 12 105 3.45e-20 90.1
MS.gene055303.t1 MTR_3g011610 38.835 103 61 1 10 112 42 142 5.51e-20 91.7
MS.gene055303.t1 MTR_5g079220 43.137 102 56 1 10 111 26 125 6.96e-20 88.6
MS.gene055303.t1 MTR_5g078930 40.385 104 60 1 2 105 6 107 7.24e-20 87.4
MS.gene055303.t1 MTR_4g478180 40.594 101 58 1 10 110 18 116 7.65e-20 89.7
MS.gene055303.t1 MTR_8g020490 43.617 94 51 1 10 103 13 104 8.37e-20 87.8
MS.gene055303.t1 MTR_4g125520 37.190 121 69 2 6 121 13 131 8.61e-20 89.0
MS.gene055303.t1 MTR_1g021230 43.689 103 56 1 10 112 62 162 9.19e-20 90.5
MS.gene055303.t1 MTR_1g045610 43.564 101 54 2 10 109 26 124 9.34e-20 87.8
MS.gene055303.t1 MTR_4g100720 40.816 98 56 1 6 103 14 109 1.04e-19 85.9
MS.gene055303.t1 MTR_8g042410 41.748 103 58 1 10 112 42 142 1.11e-19 90.5
MS.gene055303.t1 MTR_1g086510 37.273 110 67 1 10 119 26 133 1.29e-19 87.8
MS.gene055303.t1 MTR_0197s0010 41.584 101 57 1 10 110 6 104 1.30e-19 87.0
MS.gene055303.t1 MTR_7g096930 34.545 165 91 5 10 162 17 176 1.34e-19 87.8
MS.gene055303.t1 MTR_5g088610 41.121 107 60 2 7 112 11 115 1.34e-19 89.0
MS.gene055303.t1 MTR_0251s0050 43.750 96 52 1 10 105 18 111 1.35e-19 87.8
MS.gene055303.t1 MTR_2g089620 34.646 127 74 3 10 135 17 135 1.49e-19 88.6
MS.gene055303.t1 MTR_5g088080 38.793 116 68 2 10 124 17 130 2.36e-19 87.0
MS.gene055303.t1 MTR_5g088150 38.793 116 68 2 10 124 17 130 2.36e-19 87.0
MS.gene055303.t1 MTR_5g488210 38.793 116 68 2 10 124 17 130 2.36e-19 87.0
MS.gene055303.t1 MTR_5g088640 38.793 116 68 2 10 124 17 130 2.70e-19 87.0
MS.gene055303.t1 MTR_6g074860 35.065 154 88 5 4 148 1 151 2.77e-19 86.3
MS.gene055303.t1 MTR_5g488170 38.793 116 68 2 10 124 17 130 2.84e-19 86.3
MS.gene055303.t1 MTR_7g110830 37.069 116 65 2 10 125 17 124 3.12e-19 88.2
MS.gene055303.t1 MTR_1g085640 37.069 116 65 2 10 125 17 124 3.26e-19 88.2
MS.gene055303.t1 MTR_6g090405 36.066 122 77 1 7 128 14 134 3.31e-19 86.3
MS.gene055303.t1 MTR_8g027345 36.842 114 70 1 10 123 17 128 3.52e-19 87.0
MS.gene055303.t1 MTR_7g076740 44.118 102 54 2 10 110 17 116 3.58e-19 87.0
MS.gene055303.t1 MTR_5g062790 42.308 104 57 2 10 112 14 115 3.68e-19 87.0
MS.gene055303.t1 MTR_6g006030 38.095 105 63 1 10 114 19 121 3.71e-19 85.1
MS.gene055303.t1 MTR_6g027370 37.719 114 68 1 7 120 99 209 4.86e-19 87.4
MS.gene055303.t1 MTR_4g019370 41.489 94 52 1 10 103 41 131 6.42e-19 87.0
MS.gene055303.t1 MTR_4g121460 34.167 120 77 1 7 126 14 131 6.62e-19 87.0
MS.gene055303.t1 MTR_4g063100 36.792 106 65 1 10 115 12 115 6.64e-19 85.5
MS.gene055303.t1 MTR_0247s0040 40.625 96 55 1 10 105 12 105 6.99e-19 83.6
MS.gene055303.t1 MTR_6g055910 37.736 106 64 1 10 115 19 122 7.01e-19 85.9
MS.gene055303.t1 MTR_3g463400 33.813 139 86 2 7 145 133 265 7.43e-19 87.8
MS.gene055303.t1 MTR_3g077110 33.108 148 88 3 10 157 17 153 7.55e-19 87.0
MS.gene055303.t1 MTR_6g027340 35.088 114 71 1 7 120 16 126 9.65e-19 84.0
MS.gene055303.t1 MTR_7g117730 39.604 101 59 1 10 110 17 115 1.03e-18 85.1
MS.gene055303.t1 MTR_5g007370 37.624 101 61 1 10 110 17 115 1.03e-18 85.9
MS.gene055303.t1 MTR_0008s0390 43.750 96 52 1 10 105 18 111 1.07e-18 85.1
MS.gene055303.t1 MTR_1g017140 31.818 176 100 6 10 172 17 185 1.22e-18 86.3
MS.gene055303.t1 MTR_7g037260 33.333 168 103 4 7 171 145 306 1.28e-18 86.3
MS.gene055303.t1 MTR_4g091490 40.404 99 57 1 7 105 15 111 1.28e-18 86.3
MS.gene055303.t1 MTR_5g070020 37.288 118 71 1 2 119 117 231 1.34e-18 86.3
MS.gene055303.t1 MTR_1g100667 38.000 100 60 1 10 109 18 115 1.75e-18 84.7
MS.gene055303.t1 MTR_4g029540 34.641 153 89 3 10 153 15 165 1.95e-18 85.1
MS.gene055303.t1 MTR_4g073420 37.391 115 64 2 10 124 17 123 1.98e-18 84.7
MS.gene055303.t1 MTR_8g098860 38.318 107 64 1 7 113 14 118 2.03e-18 85.1
MS.gene055303.t1 MTR_1g062940 34.328 134 74 2 10 131 11 142 2.08e-18 83.2
MS.gene055303.t1 MTR_8g095390 37.815 119 66 2 6 124 13 123 2.30e-18 85.1
MS.gene055303.t1 MTR_1g085040 39.048 105 62 1 10 114 17 119 2.45e-18 85.5
MS.gene055303.t1 MTR_5g078800 41.667 96 54 1 10 105 12 105 3.02e-18 84.0
MS.gene055303.t1 MTR_2g089450 37.815 119 72 1 10 128 17 133 3.06e-18 83.6
MS.gene055303.t1 MTR_4g082230 39.604 101 59 1 10 110 17 115 3.41e-18 85.5
MS.gene055303.t1 MTR_5g010020 41.237 97 55 1 7 103 14 108 3.46e-18 84.7
MS.gene055303.t1 MTR_4g485530 30.675 163 99 5 5 163 12 164 3.55e-18 82.0
MS.gene055303.t1 MTR_7g115650 37.838 111 66 2 10 119 17 125 3.56e-18 82.4
MS.gene055303.t1 MTR_3g083540 35.593 118 68 2 7 124 43 152 3.75e-18 84.3
MS.gene055303.t1 MTR_4g097570 42.268 97 55 1 7 103 14 109 3.81e-18 84.0
MS.gene055303.t1 MTR_1g043080 38.614 101 60 1 10 110 17 115 4.04e-18 83.2
MS.gene055303.t1 MTR_5g014990 42.268 97 53 2 10 105 17 111 4.72e-18 84.0
MS.gene055303.t1 MTR_4g097570 41.837 98 55 2 7 103 14 110 5.02e-18 83.6
MS.gene055303.t1 MTR_0008s0470 42.708 96 53 1 10 105 18 111 5.52e-18 83.6
MS.gene055303.t1 MTR_2g096380 41.584 101 50 2 41 140 21 113 5.84e-18 82.0
MS.gene055303.t1 MTR_3g103570 41.237 97 54 2 10 105 17 111 6.04e-18 84.3
MS.gene055303.t1 MTR_2g064160 28.641 206 126 7 7 204 13 205 6.06e-18 84.0
MS.gene055303.t1 MTR_4g102380 40.517 116 61 2 10 125 17 124 7.28e-18 82.8
MS.gene055303.t1 MTR_4g105130 31.250 160 94 5 10 164 17 165 8.36e-18 84.0
MS.gene055303.t1 MTR_3g074520 37.624 101 61 1 10 110 17 115 9.46e-18 83.6
MS.gene055303.t1 MTR_4g057635 40.404 99 58 1 7 105 14 111 9.81e-18 83.2
MS.gene055303.t1 MTR_4g128670 42.268 97 53 2 10 105 17 111 1.00e-17 83.6
MS.gene055303.t1 MTR_1g076150 37.963 108 65 1 7 114 14 119 1.04e-17 82.0
MS.gene055303.t1 MTR_4g105660 41.176 102 57 2 9 110 182 280 1.09e-17 84.3
MS.gene055303.t1 MTR_1g083630 38.835 103 61 1 10 112 17 117 1.11e-17 84.7
MS.gene055303.t1 MTR_6g027360 34.211 114 72 1 7 120 78 188 1.19e-17 82.8
MS.gene055303.t1 MTR_2g088170 42.718 103 57 1 10 112 34 134 1.20e-17 84.3
MS.gene055303.t1 MTR_3g097450 36.719 128 68 3 6 128 13 132 1.22e-17 82.8
MS.gene055303.t1 MTR_4g082290 39.604 101 59 1 10 110 17 115 1.25e-17 84.0
MS.gene055303.t1 MTR_2g011660 39.583 96 56 1 10 105 18 111 1.71e-17 82.8
MS.gene055303.t1 MTR_1g112760 30.822 146 90 3 10 155 18 152 1.92e-17 80.9
MS.gene055303.t1 MTR_2g034790 33.333 120 78 1 7 126 14 131 1.93e-17 82.4
MS.gene055303.t1 MTR_2g095520 40.625 96 56 1 10 105 17 111 1.97e-17 82.4
MS.gene055303.t1 MTR_1g043050 35.185 108 68 1 10 117 17 122 1.99e-17 81.3
MS.gene055303.t1 MTR_6g009430 40.404 99 57 1 7 105 14 110 2.05e-17 82.4
MS.gene055303.t1 MTR_0193s0090 38.614 101 60 1 10 110 12 110 2.25e-17 80.1
MS.gene055303.t1 MTR_5g041570 36.842 114 69 1 7 120 134 244 2.29e-17 83.2
MS.gene055303.t1 MTR_5g049190 41.176 102 57 2 9 110 21 119 3.90e-17 80.1
MS.gene055303.t1 MTR_0063s0090 32.824 131 80 3 10 134 17 145 4.10e-17 79.7
MS.gene055303.t1 MTR_4g082040 29.885 174 109 4 2 167 100 268 6.49e-17 82.0
MS.gene055303.t1 MTR_5g042030 42.708 96 53 1 10 105 12 105 6.67e-17 80.5
MS.gene055303.t1 MTR_8g031360 41.176 102 57 2 10 110 18 117 6.69e-17 80.5
MS.gene055303.t1 MTR_2g067420 41.237 97 55 1 7 103 16 110 7.14e-17 80.9
MS.gene055303.t1 MTR_7g111290 41.053 95 54 1 10 104 17 109 7.98e-17 81.3
MS.gene055303.t1 MTR_3g077650 40.000 110 63 2 7 116 181 287 8.55e-17 81.6
MS.gene055303.t1 MTR_1g017000 37.374 99 61 1 7 105 14 111 9.54e-17 79.3
MS.gene055303.t1 MTR_7g086960 39.286 112 65 1 2 113 84 192 1.32e-16 80.5
MS.gene055303.t1 MTR_2g097910 39.362 94 55 1 10 103 25 116 1.68e-16 79.7
MS.gene055303.t1 MTR_7g450950 32.174 115 75 1 7 121 157 268 1.69e-16 80.1
MS.gene055303.t1 MTR_2g099740 40.206 97 56 1 7 103 14 108 1.76e-16 80.5
MS.gene055303.t1 MTR_8g017440 39.175 97 57 1 7 103 14 108 2.12e-16 79.7
MS.gene055303.t1 MTR_7g451170 34.483 116 71 2 9 122 193 305 2.60e-16 80.1
MS.gene055303.t1 MTR_2g089420 33.333 150 87 3 10 148 16 163 3.07e-16 80.1
MS.gene055303.t1 MTR_7g011170 36.207 116 66 3 10 125 17 124 3.46e-16 78.6
MS.gene055303.t1 MTR_3g065440 37.069 116 65 2 10 125 17 124 3.50e-16 78.6
MS.gene055303.t1 MTR_8g017540 39.175 97 57 1 7 103 60 154 4.04e-16 79.3
MS.gene055303.t1 MTR_3g089045 40.187 107 61 1 7 113 16 119 5.97e-16 77.8
MS.gene055303.t1 MTR_5g078140 40.594 101 58 1 10 110 17 115 6.35e-16 78.2
MS.gene055303.t1 MTR_5g079670 37.895 95 57 1 10 104 16 108 6.58e-16 76.3
MS.gene055303.t1 MTR_4g065017 34.426 122 76 2 10 131 22 139 7.04e-16 78.2
MS.gene055303.t1 MTR_3g028740 38.298 94 56 1 10 103 27 118 7.80e-16 78.2
MS.gene055303.t1 MTR_0008s0280 37.234 94 57 1 10 103 17 108 8.17e-16 76.3
MS.gene055303.t1 MTR_4g094982 34.783 115 72 1 10 124 8 119 8.39e-16 77.0
MS.gene055303.t1 MTR_4g088015 35.398 113 70 1 7 119 221 330 1.15e-15 78.2
MS.gene055303.t1 MTR_6g055910 41.333 75 44 0 41 115 19 93 1.69e-15 75.9
MS.gene055303.t1 MTR_8g017500 38.144 97 58 1 7 103 14 108 2.44e-15 76.6
MS.gene055303.t1 MTR_8g017340 30.405 148 98 3 6 152 13 156 2.69e-15 77.4
MS.gene055303.t1 MTR_6g012690 35.345 116 67 3 10 125 17 124 3.88e-15 76.3
MS.gene055303.t1 MTR_7g061330 39.362 94 54 1 10 103 116 206 5.30e-15 76.6
MS.gene055303.t1 MTR_7g461410 39.362 94 54 1 10 103 116 206 5.30e-15 76.6
MS.gene055303.t1 MTR_2g033170 36.283 113 70 1 7 119 26 136 5.31e-15 75.5
MS.gene055303.t1 MTR_7g061330 39.362 94 54 1 10 103 80 170 6.21e-15 76.3
MS.gene055303.t1 MTR_8g017390 38.384 99 58 2 6 103 13 109 7.15e-15 75.9
MS.gene055303.t1 MTR_8g017350 38.384 99 58 2 6 103 13 109 7.71e-15 76.3
MS.gene055303.t1 MTR_1g026870 36.170 94 57 1 10 103 88 178 1.32e-14 75.9
MS.gene055303.t1 MTR_7g102110 36.170 94 59 1 10 103 17 109 1.37e-14 73.6
MS.gene055303.t1 MTR_7g035350 40.426 94 53 1 10 103 228 318 1.85e-14 74.7
MS.gene055303.t1 MTR_3g101290 37.234 94 56 1 10 103 40 130 3.41e-14 71.6
MS.gene055303.t1 MTR_5g010650 38.144 97 57 2 7 103 110 203 3.47e-14 73.9
MS.gene055303.t1 MTR_4g063100 41.333 75 44 0 41 115 12 86 3.50e-14 71.6
MS.gene055303.t1 MTR_3g110028 35.106 94 58 1 10 103 88 178 4.38e-14 73.9
MS.gene055303.t1 MTR_7g109320 35.294 119 75 1 7 125 14 130 5.01e-14 72.8
MS.gene055303.t1 MTR_1g057980 37.895 95 56 1 9 103 82 173 8.24e-14 71.6
MS.gene055303.t1 MTR_7g111290 46.875 64 34 0 41 104 4 67 1.13e-13 71.6
MS.gene055303.t1 MTR_5g007300 43.243 74 40 1 10 83 69 140 1.20e-13 67.8
MS.gene055303.t1 MTR_5g016510 37.234 94 56 1 10 103 8 98 1.25e-13 71.2
MS.gene055303.t1 MTR_1g085880 35.766 137 81 3 10 141 17 151 1.43e-13 68.9
MS.gene055303.t1 MTR_4g123040 35.455 110 69 1 10 119 29 136 3.33e-13 70.1
MS.gene055303.t1 MTR_7g037130 32.743 113 71 2 7 117 145 254 4.64e-13 70.1
MS.gene055303.t1 MTR_1g085770 35.766 137 81 3 10 141 17 151 6.11e-13 68.9
MS.gene055303.t1 MTR_5g082910 35.354 99 61 1 5 103 17 112 1.43e-12 67.8
MS.gene055303.t1 MTR_6g015455 36.458 96 58 2 10 105 8 100 4.58e-12 68.2
MS.gene055303.t1 MTR_0023s0210 43.243 74 40 1 10 83 12 83 9.09e-12 60.8
MS.gene055303.t1 MTR_3g045430 30.303 132 84 3 7 138 15 138 1.63e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055303.t1 AT2G37630 66.757 367 98 9 4 350 1 363 3.81e-159 451
MS.gene055303.t1 AT5G55020 48.958 96 47 1 10 105 31 124 3.95e-23 100
MS.gene055303.t1 AT5G59780 43.396 106 58 1 10 115 13 116 4.79e-23 96.7
MS.gene055303.t1 AT1G25340 37.762 143 79 4 10 151 23 156 5.11e-23 97.4
MS.gene055303.t1 AT4G26930 45.192 104 55 1 10 113 24 125 6.96e-23 99.0
MS.gene055303.t1 AT3G46130 42.453 106 59 1 10 115 14 117 7.00e-23 96.7
MS.gene055303.t1 AT2G32460 42.718 103 57 1 10 112 23 123 1.25e-22 99.4
MS.gene055303.t1 AT2G32460 42.718 103 57 1 10 112 11 111 1.27e-22 99.0
MS.gene055303.t1 AT1G74650 41.739 115 62 2 10 121 17 129 1.29e-22 97.4
MS.gene055303.t1 AT3G47600 37.500 120 73 1 10 129 17 134 1.74e-22 97.1
MS.gene055303.t1 AT5G14750 38.793 116 62 2 10 118 21 134 2.37e-22 94.0
MS.gene055303.t1 AT5G56110 34.815 135 80 3 7 141 14 140 2.93e-22 96.3
MS.gene055303.t1 AT5G52600 41.346 104 59 1 7 110 14 115 5.32e-22 92.8
MS.gene055303.t1 AT2G26950 44.330 97 52 1 7 103 18 112 6.88e-22 95.9
MS.gene055303.t1 AT3G28910 42.574 101 56 1 10 110 17 115 9.05e-22 94.7
MS.gene055303.t1 AT5G62470 37.815 119 72 1 10 128 17 133 1.18e-21 95.1
MS.gene055303.t1 AT1G08810 43.564 101 55 1 10 110 17 115 1.36e-21 93.6
MS.gene055303.t1 AT3G01530 43.519 108 56 2 10 117 30 132 1.42e-21 91.7
MS.gene055303.t1 AT1G25340 36.364 143 76 4 10 151 23 151 2.11e-21 93.2
MS.gene055303.t1 AT1G68320 32.738 168 101 3 7 174 21 176 2.20e-21 93.2
MS.gene055303.t1 AT2G47190 37.168 113 69 1 10 122 25 135 2.41e-21 92.8
MS.gene055303.t1 AT1G25340 34.118 170 89 5 10 179 23 169 2.46e-21 93.6
MS.gene055303.t1 AT1G66370 43.103 116 61 2 10 122 13 126 2.74e-21 92.0
MS.gene055303.t1 AT3G11440 39.806 103 60 1 10 112 46 146 5.17e-21 94.4
MS.gene055303.t1 AT1G18570 39.655 116 62 2 10 125 18 125 5.56e-21 93.2
MS.gene055303.t1 AT3G27920 41.584 101 57 1 10 110 19 117 1.02e-20 90.1
MS.gene055303.t1 AT3G11440 39.806 103 60 1 10 112 46 146 1.02e-20 94.0
MS.gene055303.t1 AT3G11440 39.806 103 60 1 10 112 46 146 1.02e-20 94.0
MS.gene055303.t1 AT3G11440 39.806 103 60 1 10 112 46 146 1.02e-20 94.0
MS.gene055303.t1 AT5G06100 39.806 103 60 1 10 112 37 137 1.36e-20 92.8
MS.gene055303.t1 AT5G40330 39.604 101 59 1 10 110 17 115 1.41e-20 89.4
MS.gene055303.t1 AT5G06100 39.806 103 60 1 10 112 37 137 2.07e-20 92.8
MS.gene055303.t1 AT5G06100 39.806 103 60 1 10 112 37 137 2.07e-20 92.8
MS.gene055303.t1 AT5G06100 39.806 103 60 1 10 112 37 137 2.07e-20 92.8
MS.gene055303.t1 AT5G06100 39.806 103 60 1 10 112 37 137 2.07e-20 92.8
MS.gene055303.t1 AT3G30210 40.000 105 61 1 10 114 32 134 2.12e-20 90.1
MS.gene055303.t1 AT5G62470 36.134 119 73 1 10 128 17 132 2.32e-20 91.3
MS.gene055303.t1 AT2G26960 43.689 103 56 1 10 112 25 125 2.62e-20 92.0
MS.gene055303.t1 AT5G40350 30.909 165 108 3 10 170 22 184 3.79e-20 88.2
MS.gene055303.t1 AT4G28110 37.815 119 66 2 10 128 17 127 5.04e-20 89.4
MS.gene055303.t1 AT3G60460 46.316 95 48 2 10 103 16 108 5.16e-20 89.4
MS.gene055303.t1 AT4G01680 38.793 116 63 2 10 125 17 124 6.93e-20 87.8
MS.gene055303.t1 AT4G38620 40.000 115 61 2 10 124 17 123 7.70e-20 88.6
MS.gene055303.t1 AT1G79180 33.094 139 83 2 7 137 16 152 1.30e-19 88.2
MS.gene055303.t1 AT5G57620 40.000 120 68 3 10 128 17 133 1.35e-19 89.0
MS.gene055303.t1 AT5G07690 37.931 116 64 2 10 125 17 124 1.50e-19 89.0
MS.gene055303.t1 AT1G48000 37.273 110 67 1 10 119 37 144 1.55e-19 87.0
MS.gene055303.t1 AT5G23000 43.434 99 55 1 7 105 14 111 1.58e-19 88.6
MS.gene055303.t1 AT4G01680 38.793 116 63 2 10 125 17 124 1.62e-19 88.6
MS.gene055303.t1 AT4G13480 40.952 105 60 1 10 114 11 113 2.10e-19 87.0
MS.gene055303.t1 AT5G17800 40.367 109 62 1 7 115 93 198 2.19e-19 88.2
MS.gene055303.t1 AT3G27810 29.697 165 97 4 10 165 25 179 2.51e-19 86.3
MS.gene055303.t1 AT1G22640 37.391 115 64 2 10 124 17 123 2.72e-19 86.7
MS.gene055303.t1 AT5G16770 39.604 101 59 1 10 110 17 115 2.81e-19 87.8
MS.gene055303.t1 AT5G16770 39.604 101 59 1 10 110 17 115 2.81e-19 87.8
MS.gene055303.t1 AT1G17950 39.091 110 64 1 4 113 2 108 3.22e-19 86.3
MS.gene055303.t1 AT5G11050 32.317 164 100 3 7 162 105 265 3.59e-19 88.6
MS.gene055303.t1 AT5G16770 39.604 101 59 1 10 110 17 115 3.87e-19 87.4
MS.gene055303.t1 AT5G16770 39.604 101 59 1 10 110 17 115 3.87e-19 87.4
MS.gene055303.t1 AT5G35550 39.796 98 57 1 6 103 15 110 4.07e-19 86.3
MS.gene055303.t1 AT4G37780 40.206 97 55 2 10 105 17 111 5.04e-19 86.7
MS.gene055303.t1 AT3G24310 41.509 106 59 2 10 114 23 126 5.16e-19 86.3
MS.gene055303.t1 AT3G48920 40.196 102 56 2 5 103 15 114 5.47e-19 85.9
MS.gene055303.t1 AT3G61250 42.574 101 56 1 10 110 17 115 5.82e-19 86.7
MS.gene055303.t1 AT3G02940 36.207 116 66 2 10 125 17 124 5.99e-19 86.7
MS.gene055303.t1 AT4G01680 36.508 126 64 2 10 125 17 136 7.18e-19 87.0
MS.gene055303.t1 AT2G47460 42.268 97 54 1 7 103 14 108 8.16e-19 87.0
MS.gene055303.t1 AT3G02940 36.207 116 66 2 10 125 17 124 8.32e-19 86.3
MS.gene055303.t1 AT3G02940 36.207 116 66 2 10 125 17 124 8.32e-19 86.3
MS.gene055303.t1 AT5G61420 37.069 116 65 2 10 125 17 124 1.13e-18 86.7
MS.gene055303.t1 AT1G35515 33.913 115 68 2 10 124 17 123 1.45e-18 83.6
MS.gene055303.t1 AT5G58850 38.261 115 68 1 9 123 107 218 1.49e-18 87.0
MS.gene055303.t1 AT4G33450 38.393 112 66 1 7 118 19 127 2.45e-18 84.0
MS.gene055303.t1 AT1G69560 37.719 114 68 1 7 120 123 233 2.57e-18 85.5
MS.gene055303.t1 AT5G07700 36.207 116 66 2 10 125 17 124 2.74e-18 85.1
MS.gene055303.t1 AT5G07700 36.207 116 66 2 10 125 17 124 2.74e-18 85.1
MS.gene055303.t1 AT5G65230 38.614 101 60 1 10 110 17 115 2.85e-18 84.7
MS.gene055303.t1 AT1G66390 44.118 102 55 1 10 111 13 112 2.97e-18 83.6
MS.gene055303.t1 AT1G69560 37.719 114 68 1 7 120 107 217 3.11e-18 85.1
MS.gene055303.t1 AT1G57560 37.069 116 65 2 10 125 17 124 3.44e-18 84.0
MS.gene055303.t1 AT4G21440 40.625 96 55 1 10 105 17 110 3.56e-18 85.1
MS.gene055303.t1 AT1G66380 43.137 102 56 1 10 111 13 112 3.62e-18 80.5
MS.gene055303.t1 AT2G31180 35.433 127 78 2 7 131 14 138 4.19e-18 83.2
MS.gene055303.t1 AT3G49690 42.268 97 53 2 10 105 17 111 5.20e-18 84.0
MS.gene055303.t1 AT4G18770 41.176 102 57 1 9 110 219 317 5.28e-18 85.1
MS.gene055303.t1 AT1G57560 37.069 116 65 2 10 125 17 124 5.45e-18 84.0
MS.gene055303.t1 AT1G74080 36.207 116 66 2 10 125 17 124 5.83e-18 84.3
MS.gene055303.t1 AT3G53200 37.273 110 66 2 10 118 14 121 6.90e-18 82.4
MS.gene055303.t1 AT3G23250 39.423 104 61 1 7 110 14 115 7.00e-18 83.2
MS.gene055303.t1 AT3G13540 36.538 104 64 1 7 110 25 126 7.86e-18 82.4
MS.gene055303.t1 AT1G26780 36.842 114 69 1 7 120 98 208 8.90e-18 82.8
MS.gene055303.t1 AT4G25560 38.298 94 56 1 10 103 15 106 9.47e-18 82.8
MS.gene055303.t1 AT5G10280 37.624 101 61 1 10 110 17 115 9.88e-18 83.6
MS.gene055303.t1 AT1G26780 36.842 114 69 1 7 120 98 208 1.00e-17 84.0
MS.gene055303.t1 AT1G56650 43.137 102 56 1 10 111 13 112 1.05e-17 82.0
MS.gene055303.t1 AT1G63910 38.318 107 64 1 7 113 14 118 1.25e-17 83.6
MS.gene055303.t1 AT5G54230 38.614 101 60 1 10 110 17 115 1.28e-17 83.2
MS.gene055303.t1 AT4G17785 35.345 116 67 2 10 125 18 125 1.49e-17 83.2
MS.gene055303.t1 AT3G46130 46.250 80 43 0 36 115 6 85 1.55e-17 81.3
MS.gene055303.t1 AT4G17785 35.345 116 67 2 10 125 18 125 1.84e-17 83.2
MS.gene055303.t1 AT1G09540 35.115 131 76 3 10 140 17 138 1.89e-17 83.2
MS.gene055303.t1 AT3G28470 30.769 156 94 3 10 159 17 164 1.99e-17 82.4
MS.gene055303.t1 AT4G05100 40.625 96 55 1 10 105 18 111 2.03e-17 82.4
MS.gene055303.t1 AT5G52260 34.646 127 78 2 5 128 9 133 2.10e-17 81.6
MS.gene055303.t1 AT3G55730 41.489 94 52 1 10 103 59 149 2.27e-17 83.2
MS.gene055303.t1 AT4G09460 31.481 162 93 3 10 158 17 173 2.44e-17 80.9
MS.gene055303.t1 AT3G13890 39.796 98 57 1 7 104 14 109 2.57e-17 82.4
MS.gene055303.t1 AT2G16720 34.014 147 80 5 10 151 17 151 2.67e-17 81.3
MS.gene055303.t1 AT3G62610 39.175 97 57 1 7 103 14 108 2.83e-17 82.4
MS.gene055303.t1 AT3G12820 30.978 184 104 3 7 169 16 197 3.13e-17 80.5
MS.gene055303.t1 AT4G34990 37.008 127 77 2 3 129 10 133 3.22e-17 81.3
MS.gene055303.t1 AT1G74430 42.553 94 52 1 10 103 17 108 4.34e-17 80.9
MS.gene055303.t1 AT5G65790 41.237 97 54 2 10 105 17 111 4.53e-17 82.0
MS.gene055303.t1 AT3G46130 44.444 81 45 0 35 115 15 95 4.91e-17 79.7
MS.gene055303.t1 AT3G12720 37.500 104 63 1 7 110 24 125 5.32e-17 80.9
MS.gene055303.t1 AT5G59780 48.000 75 39 0 41 115 21 95 5.61e-17 79.3
MS.gene055303.t1 AT3G01140 33.858 127 76 2 10 136 17 135 6.11e-17 81.3
MS.gene055303.t1 AT3G13890 38.095 105 58 1 7 104 14 118 6.46e-17 81.6
MS.gene055303.t1 AT3G01140 33.858 127 76 2 10 136 60 178 7.25e-17 81.6
MS.gene055303.t1 AT5G26660 35.652 115 66 2 10 124 17 123 7.55e-17 81.3
MS.gene055303.t1 AT5G15310 33.621 116 69 2 10 125 17 124 8.40e-17 79.3
MS.gene055303.t1 AT1G79180 29.412 170 81 3 7 137 16 185 8.87e-17 80.5
MS.gene055303.t1 AT1G06180 36.937 111 68 1 10 120 17 125 9.73e-17 79.3
MS.gene055303.t1 AT1G34670 34.483 116 68 2 10 125 17 124 1.05e-16 80.9
MS.gene055303.t1 AT5G15310 33.621 116 69 2 10 125 17 124 1.14e-16 80.1
MS.gene055303.t1 AT5G15310 33.621 116 69 2 10 125 17 124 1.19e-16 80.1
MS.gene055303.t1 AT1G16490 33.125 160 96 4 7 165 16 165 1.76e-16 79.0
MS.gene055303.t1 AT5G12870 39.362 94 55 1 10 103 23 114 2.20e-16 79.0
MS.gene055303.t1 AT1G73410 37.838 111 66 1 4 114 3 110 2.45e-16 77.0
MS.gene055303.t1 AT5G49330 37.113 97 59 1 7 103 14 108 2.71e-16 79.3
MS.gene055303.t1 AT4G12350 40.594 101 58 1 10 110 17 115 3.11e-16 78.6
MS.gene055303.t1 AT3G27785 37.838 111 65 2 7 116 189 296 3.27e-16 80.1
MS.gene055303.t1 AT1G73410 37.838 111 66 1 4 114 3 110 3.63e-16 77.4
MS.gene055303.t1 AT1G66230 36.207 116 66 2 10 125 17 124 4.43e-16 78.2
MS.gene055303.t1 AT4G22680 39.604 101 59 1 10 110 17 115 4.97e-16 77.8
MS.gene055303.t1 AT3G29020 34.351 131 80 2 1 131 59 183 7.79e-16 76.3
MS.gene055303.t1 AT2G39880 41.489 94 52 1 10 103 53 143 7.86e-16 78.2
MS.gene055303.t1 AT5G60890 36.975 119 72 2 10 128 17 132 8.46e-16 77.4
MS.gene055303.t1 AT5G40350 31.387 137 90 2 38 170 3 139 9.02e-16 74.7
MS.gene055303.t1 AT5G62320 31.944 144 87 2 10 148 18 155 9.62e-16 76.3
MS.gene055303.t1 AT1G18710 40.426 94 54 1 10 103 17 108 9.81e-16 76.6
MS.gene055303.t1 AT3G29020 34.351 131 80 2 1 131 61 185 1.27e-15 77.0
MS.gene055303.t1 AT3G47600 38.202 89 55 0 41 129 40 128 1.34e-15 77.4
MS.gene055303.t1 AT4G32730 37.234 94 56 1 10 103 90 180 2.39e-15 78.2
MS.gene055303.t1 AT4G32730 37.234 94 56 1 10 103 90 180 2.39e-15 78.2
MS.gene055303.t1 AT4G32730 37.234 94 56 1 10 103 90 180 2.39e-15 78.2
MS.gene055303.t1 AT4G32730 37.234 94 56 1 10 103 90 180 2.39e-15 78.2
MS.gene055303.t1 AT4G32730 37.234 94 56 1 10 103 90 180 2.45e-15 77.8
MS.gene055303.t1 AT2G36890 39.394 99 59 1 7 105 14 111 2.62e-15 75.9
MS.gene055303.t1 AT3G09370 38.298 94 55 1 10 103 138 228 2.84e-15 77.4
MS.gene055303.t1 AT3G06490 38.843 121 70 2 1 119 13 131 2.94e-15 76.3
MS.gene055303.t1 AT3G09370 38.298 94 55 1 10 103 133 223 2.98e-15 77.4
MS.gene055303.t1 AT3G09230 39.362 94 54 1 10 103 58 148 3.24e-15 76.6
MS.gene055303.t1 AT3G53200 41.772 79 45 1 41 118 10 88 3.27e-15 73.9
MS.gene055303.t1 AT3G09370 38.298 94 55 1 10 103 146 236 3.34e-15 77.0
MS.gene055303.t1 AT2G36890 39.394 99 59 1 7 105 55 152 4.72e-15 75.9
MS.gene055303.t1 AT5G02320 38.298 94 55 1 10 103 130 220 5.08e-15 76.6
MS.gene055303.t1 AT5G02320 38.298 94 55 1 10 103 130 220 5.08e-15 76.6
MS.gene055303.t1 AT1G56160 34.951 103 65 1 7 109 16 116 6.15e-15 75.1
MS.gene055303.t1 AT5G02320 38.298 94 55 1 10 103 70 160 6.97e-15 76.3
MS.gene055303.t1 AT3G27810 37.209 86 54 0 37 122 1 86 1.13e-14 72.0
MS.gene055303.t1 AT5G16600 36.207 116 66 2 10 125 17 124 1.23e-14 74.3
MS.gene055303.t1 AT5G40360 34.579 107 67 1 3 109 154 257 1.53e-14 74.3
MS.gene055303.t1 AT3G08500 36.842 95 58 1 10 104 35 127 1.54e-14 74.3
MS.gene055303.t1 AT3G12820 45.588 68 37 0 43 110 2 69 1.77e-14 71.6
MS.gene055303.t1 AT5G14750 38.554 83 44 1 43 118 18 100 1.94e-14 70.9
MS.gene055303.t1 AT2G25230 28.235 170 98 6 6 174 25 171 2.25e-14 72.4
MS.gene055303.t1 AT5G49620 37.168 113 69 1 7 119 28 138 2.95e-14 73.2
MS.gene055303.t1 AT2G23290 39.362 94 54 1 10 103 16 106 5.75e-14 72.4
MS.gene055303.t1 AT5G35550 47.619 63 33 0 41 103 51 113 6.41e-14 71.2
MS.gene055303.t1 AT5G26660 38.095 84 46 1 41 124 15 92 7.98e-14 72.0
MS.gene055303.t1 AT5G11510 32.979 94 60 1 10 103 84 174 8.05e-14 73.2
MS.gene055303.t1 AT5G11510 33.673 98 61 2 7 103 29 123 8.18e-11 63.9
MS.gene055303.t1 AT5G11510 32.979 94 60 1 10 103 84 174 8.05e-14 73.2
MS.gene055303.t1 AT5G11510 33.673 98 61 2 7 103 29 123 8.18e-11 63.9
MS.gene055303.t1 AT5G11510 32.979 94 60 1 10 103 84 174 8.05e-14 73.2
MS.gene055303.t1 AT5G11510 33.673 98 61 2 7 103 29 123 8.18e-11 63.9
MS.gene055303.t1 AT5G11510 32.979 94 60 1 10 103 84 174 8.24e-14 73.2
MS.gene055303.t1 AT5G11510 33.673 98 61 2 7 103 29 123 8.06e-11 63.9
MS.gene055303.t1 AT5G11510 32.979 94 60 1 10 103 84 174 8.50e-14 73.2
MS.gene055303.t1 AT5G11510 33.673 98 61 2 7 103 29 123 8.10e-11 63.9
MS.gene055303.t1 AT5G14340 32.800 125 81 2 7 131 26 147 1.80e-13 70.5
MS.gene055303.t1 AT3G50060 37.255 102 59 2 4 103 1 99 1.83e-13 70.5
MS.gene055303.t1 AT5G40430 31.579 114 74 2 7 120 54 163 2.69e-13 69.7
MS.gene055303.t1 AT4G37260 37.234 94 56 1 10 103 16 106 4.37e-13 69.7
MS.gene055303.t1 AT5G39700 30.400 125 84 1 10 134 59 180 4.50e-13 67.8
MS.gene055303.t1 AT5G67300 33.594 128 77 3 4 129 1 122 8.17e-13 68.9
MS.gene055303.t1 AT4G00540 37.374 99 56 2 10 105 106 201 3.72e-12 67.4
MS.gene055303.t1 AT4G00540 37.374 99 56 2 10 105 104 199 5.15e-12 67.0
MS.gene055303.t1 AT1G66380 43.662 71 40 0 41 111 9 79 8.62e-12 61.6
MS.gene055303.t1 AT1G22640 38.028 71 38 1 54 124 2 66 2.86e-11 62.8
MS.gene055303.t1 AT1G66380 45.333 75 39 1 10 84 13 85 3.72e-11 60.1
MS.gene055303.t1 AT5G49620 33.071 127 69 2 7 119 28 152 4.05e-11 63.9
MS.gene055303.t1 AT5G14750 36.111 72 39 1 54 118 2 73 7.77e-11 60.1
MS.gene055303.t1 AT5G14750 36.111 72 39 1 54 118 2 73 7.77e-11 60.1

Find 105 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGTCAATTTCTGCTCTT+TGG 0.188451 7.1:-40496656 None:intergenic
AAGCAAAGATAAAAGCTTTA+AGG 0.208103 7.1:+40496554 MS.gene055303:CDS
CTCCGGGATTGCTTCCTTCA+TGG 0.286848 7.1:+40496188 MS.gene055303:CDS
GCATGAACACGCCTCTTAAC+AGG 0.289962 7.1:+40495792 MS.gene055303:CDS
GACAACGCGCCTCTTGTTCT+TGG 0.307535 7.1:+40496328 MS.gene055303:CDS
TCGTACTTGCTATCGTTAAT+CGG 0.308689 7.1:-40496055 None:intergenic
TAGAATTGAAGGAGAATATA+GGG 0.345153 7.1:+40496600 MS.gene055303:CDS
TGTTCCCGTGTGTCGCTTGA+AGG 0.349011 7.1:-40495910 None:intergenic
GGTCGAACTGCTAAGAGGTT+AGG 0.349295 7.1:+40495962 MS.gene055303:CDS
AGTGTCACTGATGGTGAATT+TGG 0.350178 7.1:-40496244 None:intergenic
ATAGAATTGAAGGAGAATAT+AGG 0.366625 7.1:+40496599 MS.gene055303:CDS
ACAACGCGCCTCTTGTTCTT+GGG 0.374191 7.1:+40496329 MS.gene055303:CDS
GATGGTGAATTTGGCCTAAC+AGG 0.378998 7.1:-40496235 None:intergenic
AAAATTGCCGCGCAAGTTCC+CGG 0.382532 7.1:+40495941 MS.gene055303:CDS
AGCAAAGATAAAAGCTTTAA+GGG 0.411833 7.1:+40496555 MS.gene055303:CDS
GGAGGAACAAGCAGTTGCTT+TGG 0.413662 7.1:+40496576 MS.gene055303:CDS
CTGCTACTGTCGAGGGAGAT+AGG 0.417667 7.1:-40496270 None:intergenic
GAATATAGGGAACAGTTAGC+AGG 0.428199 7.1:+40496613 MS.gene055303:CDS
GGTATGCAGATAAGAACTAT+TGG 0.433146 7.1:-40496149 None:intergenic
ATGTCAAACAGTACGGTCCT+AGG 0.440465 7.1:+40495747 MS.gene055303:CDS
CTCAAGCCAGGTATTAAGAA+AGG 0.442155 7.1:+40495851 MS.gene055303:CDS
CAAACAATGCAGCTCCTGTT+AGG 0.442754 7.1:+40496221 MS.gene055303:CDS
AAGCGACACACGGGAACAAA+TGG 0.446322 7.1:+40495915 MS.gene055303:CDS
GCAGCGGTGGAGAGCGGAAG+AGG 0.455232 7.1:+40495706 MS.gene055303:CDS
GTTGCTTTGGATAGAATTGA+AGG 0.460120 7.1:+40496589 MS.gene055303:CDS
TCAAGGCATGCTGAATCAAA+TGG 0.464258 7.1:+40496736 MS.gene055303:CDS
AGAACAAGAGGCGCGTTGTC+CGG 0.468651 7.1:-40496325 None:intergenic
CTTGTTCTAGAAACTTAGTA+AGG 0.469265 7.1:-40496702 None:intergenic
GCCTCCTCCGTGGATGCAAC+CGG 0.471595 7.1:+40496294 MS.gene055303:CDS
GTCGAACTGCTAAGAGGTTA+GGG 0.475555 7.1:+40495963 MS.gene055303:CDS
GCAGAAATTGACTGAACAAT+GGG 0.483539 7.1:+40496663 MS.gene055303:CDS
GGATGTCGGATATGAAAGAT+AGG 0.495105 7.1:+40495684 None:intergenic
CCTCGTACCGGTTGCATCCA+CGG 0.501659 7.1:-40496301 None:intergenic
ACTAAGTTTCTAGAACAAGT+AGG 0.508354 7.1:+40496706 MS.gene055303:CDS
CGTACTTGCTATCGTTAATC+GGG 0.510354 7.1:-40496054 None:intergenic
CTGCTAAGAGGTTAGGGAAG+TGG 0.512354 7.1:+40495969 MS.gene055303:CDS
CTAAGTTTCTAGAACAAGTA+GGG 0.513298 7.1:+40496707 MS.gene055303:CDS
AGCCATGAAGGAAGCAATCC+CGG 0.514811 7.1:-40496190 None:intergenic
AACAAGTAGGGTGTAGATCA+AGG 0.517136 7.1:+40496719 MS.gene055303:CDS
ACCGGTTGCATCCACGGAGG+AGG 0.517761 7.1:-40496295 None:intergenic
AAGTCGTCGGAGGGAGAAGA+TGG 0.518254 7.1:+40496522 MS.gene055303:CDS
CATGGCGCTGTTCTAAGTTA+CGG 0.519277 7.1:+40496364 MS.gene055303:CDS
CGATGCACAAGCACCTACTC+CGG 0.522818 7.1:+40496171 MS.gene055303:CDS
GATGCAACCGGTACGAGGAC+CGG 0.528845 7.1:+40496306 MS.gene055303:CDS
CACATAAGAAAGAGGCGGCA+TGG 0.534804 7.1:+40496458 MS.gene055303:CDS
TGGAAGAATTACCTCAAGCC+AGG 0.536126 7.1:+40495839 MS.gene055303:CDS
GAAGCAGCCATGACAAATGA+AGG 0.537866 7.1:-40496127 None:intergenic
GCGTTGTCCGGTCCTCGTAC+CGG 0.539158 7.1:-40496313 None:intergenic
AAGCAGCAGAGAGAAACAAA+AGG 0.539560 7.1:+40496010 MS.gene055303:CDS
AGAGAACCTTTCTTAATACC+TGG 0.540175 7.1:-40495857 None:intergenic
AACAGTACGGTCCTAGGGAA+TGG 0.540461 7.1:+40495753 MS.gene055303:CDS
CTTTCTTAATACCTGGCTTG+AGG 0.542860 7.1:-40495850 None:intergenic
CAAAATCGTGTTTAGAAAGG+TGG 0.549501 7.1:+40495819 MS.gene055303:CDS
TAACCTCTTAGCAGTTCGAC+CGG 0.552018 7.1:-40495960 None:intergenic
GGAAGAAGTGCATCATGCAT+TGG 0.554304 7.1:+40496432 MS.gene055303:CDS
CGGAGTAGGTGCTTGTGCAT+CGG 0.556696 7.1:-40496170 None:intergenic
TTTGAATTCGATAGCCATGA+AGG 0.557551 7.1:-40496202 None:intergenic
CAGAGAAGGCAAGTCGTCGG+AGG 0.558547 7.1:+40496512 MS.gene055303:CDS
ACCCTCGCCTTCATTTGTCA+TGG 0.561657 7.1:+40496120 MS.gene055303:CDS
ACGCAAAATCGTGTTTAGAA+AGG 0.562797 7.1:+40495816 MS.gene055303:CDS
GGTTGATTGCTGCAAGGAGT+TGG 0.563650 7.1:+40496411 MS.gene055303:CDS
TTCCCGGTCGAACTGCTAAG+AGG 0.570961 7.1:+40495957 MS.gene055303:CDS
CTAAGAGGTTAGGGAAGTGG+TGG 0.571294 7.1:+40495972 MS.gene055303:CDS
AGCAGAAATTGACTGAACAA+TGG 0.573036 7.1:+40496662 MS.gene055303:CDS
GATGCACAAGCACCTACTCC+GGG 0.573172 7.1:+40496172 MS.gene055303:CDS
CAGTAGCAGCGCCTCCTCCG+TGG 0.575710 7.1:+40496284 MS.gene055303:CDS
AGGAGGCGCTGCTACTGTCG+AGG 0.582880 7.1:-40496278 None:intergenic
TGTCAAACAGTACGGTCCTA+GGG 0.585068 7.1:+40495748 MS.gene055303:CDS
GAAGGAAGCAATCCCGGAGT+AGG 0.586055 7.1:-40496184 None:intergenic
GCTACAGTTGGAGTCAGAGA+AGG 0.590783 7.1:+40496498 MS.gene055303:CDS
AGAGAAGGCAAGTCGTCGGA+GGG 0.591005 7.1:+40496513 MS.gene055303:CDS
CGCGCTTATGTCAAACAGTA+CGG 0.591202 7.1:+40495740 MS.gene055303:CDS
AGATAGGCAGCGGTGGAGAG+CGG 0.597052 7.1:+40495700 MS.gene055303:CDS
AGCCATGACAAATGAAGGCG+AGG 0.598680 7.1:-40496122 None:intergenic
CTTGGGAACGTAGCTCCACA+TGG 0.599562 7.1:+40496346 MS.gene055303:CDS
ACTCCAACTGTAGCTCCACT+CGG 0.599741 7.1:-40496489 None:intergenic
AAGCCGAGTGGAGCTACAGT+TGG 0.601569 7.1:+40496486 MS.gene055303:CDS
CGGATATGAAAGATAGGCAG+CGG 0.602135 7.1:+40495690 MS.gene055303:CDS
TCTAAGTTACGGCGAAAGCA+TGG 0.605377 7.1:+40496375 MS.gene055303:CDS
CATGAACACGCCTCTTAACA+GGG 0.605709 7.1:+40495793 MS.gene055303:CDS
AACCTCTTAGCAGTTCGACC+GGG 0.608401 7.1:-40495959 None:intergenic
AAGCATGGTAATGTCTGAGT+TGG 0.613423 7.1:+40496390 MS.gene055303:CDS
ATTGGCAGCACATAAGAAAG+AGG 0.615820 7.1:+40496450 MS.gene055303:CDS
AGTCAGAGAAGGCAAGTCGT+CGG 0.616813 7.1:+40496509 MS.gene055303:CDS
ATTAGCCTTCAAGCGACACA+CGG 0.617306 7.1:+40495905 MS.gene055303:CDS
AATATAGGGAACAGTTAGCA+GGG 0.620687 7.1:+40496614 MS.gene055303:CDS
AGTTCGACCGGGAACTTGCG+CGG 0.624782 7.1:-40495948 None:intergenic
TGAGTTGGTTGATTGCTGCA+AGG 0.626354 7.1:+40496405 MS.gene055303:CDS
CCGTGGATGCAACCGGTACG+AGG 0.628739 7.1:+40496301 MS.gene055303:CDS
GGAGGCGCTGCTACTGTCGA+GGG 0.631075 7.1:-40496277 None:intergenic
GCTACGTTCCCAAGAACAAG+AGG 0.644153 7.1:-40496337 None:intergenic
TAAGAGGTTAGGGAAGTGGT+GGG 0.644363 7.1:+40495973 MS.gene055303:CDS
GATAGGCTAAGTGTCACTGA+TGG 0.652298 7.1:-40496253 None:intergenic
ATATGAAAGATAGGCAGCGG+TGG 0.653268 7.1:+40495693 MS.gene055303:CDS
TCGTCGGAGGGAGAAGATGG+AGG 0.653392 7.1:+40496525 MS.gene055303:CDS
AAAGATAAAAGCTTTAAGGG+AGG 0.656290 7.1:+40496558 MS.gene055303:CDS
GGCATGGAGGTTAAGCCGAG+TGG 0.659534 7.1:+40496474 MS.gene055303:CDS
GCCATGACAAATGAAGGCGA+GGG 0.670603 7.1:-40496121 None:intergenic
TGTTCATGCGCTGAGACACG+AGG 0.674566 7.1:-40495778 None:intergenic
TAACTTAGAACAGCGCCATG+TGG 0.674992 7.1:-40496361 None:intergenic
GGCAGCACATAAGAAAGAGG+CGG 0.680405 7.1:+40496453 MS.gene055303:CDS
GACACGAGGTTCCATTCCCT+AGG 0.688432 7.1:-40495764 None:intergenic
TTAGCCTTCAAGCGACACAC+GGG 0.689450 7.1:+40495906 MS.gene055303:CDS
ATAAGAAAGAGGCGGCATGG+AGG 0.734242 7.1:+40496461 MS.gene055303:CDS
CGTACCGGTTGCATCCACGG+AGG 0.799948 7.1:-40496298 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGCAAAGATAAAAGCTTTA+AGG + chr7.1:40496554-40496573 MS.gene055303:CDS 25.0%
! ATAGAATTGAAGGAGAATAT+AGG + chr7.1:40496599-40496618 MS.gene055303:CDS 25.0%
! TAGAATTGAAGGAGAATATA+GGG + chr7.1:40496600-40496619 MS.gene055303:CDS 25.0%
!! AGCAAAGATAAAAGCTTTAA+GGG + chr7.1:40496555-40496574 MS.gene055303:CDS 25.0%
!! AAAGATAAAAGCTTTAAGGG+AGG + chr7.1:40496558-40496577 MS.gene055303:CDS 30.0%
!! ACTAAGTTTCTAGAACAAGT+AGG + chr7.1:40496706-40496725 MS.gene055303:CDS 30.0%
!! CTAAGTTTCTAGAACAAGTA+GGG + chr7.1:40496707-40496726 MS.gene055303:CDS 30.0%
!! CTTGTTCTAGAAACTTAGTA+AGG - chr7.1:40496705-40496724 None:intergenic 30.0%
!! TCTCTCTTTTACTAGTTTCT+CGG - chr7.1:40496101-40496120 None:intergenic 30.0%
AATATAGGGAACAGTTAGCA+GGG + chr7.1:40496614-40496633 MS.gene055303:CDS 35.0%
ACGCAAAATCGTGTTTAGAA+AGG + chr7.1:40495816-40495835 MS.gene055303:CDS 35.0%
AGAGAACCTTTCTTAATACC+TGG - chr7.1:40495860-40495879 None:intergenic 35.0%
AGCAGAAATTGACTGAACAA+TGG + chr7.1:40496662-40496681 MS.gene055303:CDS 35.0%
CAAAATCGTGTTTAGAAAGG+TGG + chr7.1:40495819-40495838 MS.gene055303:CDS 35.0%
GCAGAAATTGACTGAACAAT+GGG + chr7.1:40496663-40496682 MS.gene055303:CDS 35.0%
GGTATGCAGATAAGAACTAT+TGG - chr7.1:40496152-40496171 None:intergenic 35.0%
TTCAGTCAATTTCTGCTCTT+TGG - chr7.1:40496659-40496678 None:intergenic 35.0%
TTTGAATTCGATAGCCATGA+AGG - chr7.1:40496205-40496224 None:intergenic 35.0%
! GTTGCTTTGGATAGAATTGA+AGG + chr7.1:40496589-40496608 MS.gene055303:CDS 35.0%
!! TCGTACTTGCTATCGTTAAT+CGG - chr7.1:40496058-40496077 None:intergenic 35.0%
AACAAGTAGGGTGTAGATCA+AGG + chr7.1:40496719-40496738 MS.gene055303:CDS 40.0%
AAGCAGCAGAGAGAAACAAA+AGG + chr7.1:40496010-40496029 MS.gene055303:CDS 40.0%
ATTGGCAGCACATAAGAAAG+AGG + chr7.1:40496450-40496469 MS.gene055303:CDS 40.0%
CTCAAGCCAGGTATTAAGAA+AGG + chr7.1:40495851-40495870 MS.gene055303:CDS 40.0%
GAATATAGGGAACAGTTAGC+AGG + chr7.1:40496613-40496632 MS.gene055303:CDS 40.0%
TCAAGGCATGCTGAATCAAA+TGG + chr7.1:40496736-40496755 MS.gene055303:CDS 40.0%
! AAGCATGGTAATGTCTGAGT+TGG + chr7.1:40496390-40496409 MS.gene055303:CDS 40.0%
! AGTGTCACTGATGGTGAATT+TGG - chr7.1:40496247-40496266 None:intergenic 40.0%
! CTTTCTTAATACCTGGCTTG+AGG - chr7.1:40495853-40495872 None:intergenic 40.0%
!! CGTACTTGCTATCGTTAATC+GGG - chr7.1:40496057-40496076 None:intergenic 40.0%
ATATGAAAGATAGGCAGCGG+TGG + chr7.1:40495693-40495712 MS.gene055303:CDS 45.0%
ATGTCAAACAGTACGGTCCT+AGG + chr7.1:40495747-40495766 MS.gene055303:CDS 45.0%
CAAACAATGCAGCTCCTGTT+AGG + chr7.1:40496221-40496240 MS.gene055303:CDS 45.0%
CATGAACACGCCTCTTAACA+GGG + chr7.1:40495793-40495812 MS.gene055303:CDS 45.0%
CGCGCTTATGTCAAACAGTA+CGG + chr7.1:40495740-40495759 MS.gene055303:CDS 45.0%
CGGATATGAAAGATAGGCAG+CGG + chr7.1:40495690-40495709 MS.gene055303:CDS 45.0%
GAAGCAGCCATGACAAATGA+AGG - chr7.1:40496130-40496149 None:intergenic 45.0%
GATGGTGAATTTGGCCTAAC+AGG - chr7.1:40496238-40496257 None:intergenic 45.0%
GTCGAACTGCTAAGAGGTTA+GGG + chr7.1:40495963-40495982 MS.gene055303:CDS 45.0%
TAACCTCTTAGCAGTTCGAC+CGG - chr7.1:40495963-40495982 None:intergenic 45.0%
TAACTTAGAACAGCGCCATG+TGG - chr7.1:40496364-40496383 None:intergenic 45.0%
TAAGAGGTTAGGGAAGTGGT+GGG + chr7.1:40495973-40495992 MS.gene055303:CDS 45.0%
TCTAAGTTACGGCGAAAGCA+TGG + chr7.1:40496375-40496394 MS.gene055303:CDS 45.0%
TGGAAGAATTACCTCAAGCC+AGG + chr7.1:40495839-40495858 MS.gene055303:CDS 45.0%
TGTCAAACAGTACGGTCCTA+GGG + chr7.1:40495748-40495767 MS.gene055303:CDS 45.0%
! CATGGCGCTGTTCTAAGTTA+CGG + chr7.1:40496364-40496383 MS.gene055303:CDS 45.0%
! GATAGGCTAAGTGTCACTGA+TGG - chr7.1:40496256-40496275 None:intergenic 45.0%
! GATTTTGCGTCCCTGTTAAG+AGG - chr7.1:40495806-40495825 None:intergenic 45.0%
! GGAAGAAGTGCATCATGCAT+TGG + chr7.1:40496432-40496451 MS.gene055303:CDS 45.0%
!! ATTAGCCTTCAAGCGACACA+CGG + chr7.1:40495905-40495924 MS.gene055303:CDS 45.0%
!! TGAGTTGGTTGATTGCTGCA+AGG + chr7.1:40496405-40496424 MS.gene055303:CDS 45.0%
AAAATTGCCGCGCAAGTTCC+CGG + chr7.1:40495941-40495960 MS.gene055303:CDS 50.0%
AACAGTACGGTCCTAGGGAA+TGG + chr7.1:40495753-40495772 MS.gene055303:CDS 50.0%
AACCTCTTAGCAGTTCGACC+GGG - chr7.1:40495962-40495981 None:intergenic 50.0%
AAGCGACACACGGGAACAAA+TGG + chr7.1:40495915-40495934 MS.gene055303:CDS 50.0%
ACAACGCGCCTCTTGTTCTT+GGG + chr7.1:40496329-40496348 MS.gene055303:CDS 50.0%
ACCCTCGCCTTCATTTGTCA+TGG + chr7.1:40496120-40496139 MS.gene055303:CDS 50.0%
ACTCCAACTGTAGCTCCACT+CGG - chr7.1:40496492-40496511 None:intergenic 50.0%
AGCCATGAAGGAAGCAATCC+CGG - chr7.1:40496193-40496212 None:intergenic 50.0%
AGCCATGACAAATGAAGGCG+AGG - chr7.1:40496125-40496144 None:intergenic 50.0%
AGTCAGAGAAGGCAAGTCGT+CGG + chr7.1:40496509-40496528 MS.gene055303:CDS 50.0%
ATAAGAAAGAGGCGGCATGG+AGG + chr7.1:40496461-40496480 MS.gene055303:CDS 50.0%
CACATAAGAAAGAGGCGGCA+TGG + chr7.1:40496458-40496477 MS.gene055303:CDS 50.0%
CTAAGAGGTTAGGGAAGTGG+TGG + chr7.1:40495972-40495991 MS.gene055303:CDS 50.0%
CTGCTAAGAGGTTAGGGAAG+TGG + chr7.1:40495969-40495988 MS.gene055303:CDS 50.0%
GCATGAACACGCCTCTTAAC+AGG + chr7.1:40495792-40495811 MS.gene055303:CDS 50.0%
GCCATGACAAATGAAGGCGA+GGG - chr7.1:40496124-40496143 None:intergenic 50.0%
GCTACAGTTGGAGTCAGAGA+AGG + chr7.1:40496498-40496517 MS.gene055303:CDS 50.0%
GCTACGTTCCCAAGAACAAG+AGG - chr7.1:40496340-40496359 None:intergenic 50.0%
GGAGGAACAAGCAGTTGCTT+TGG + chr7.1:40496576-40496595 MS.gene055303:CDS 50.0%
GGCAGCACATAAGAAAGAGG+CGG + chr7.1:40496453-40496472 MS.gene055303:CDS 50.0%
GGTCGAACTGCTAAGAGGTT+AGG + chr7.1:40495962-40495981 MS.gene055303:CDS 50.0%
GGTTGATTGCTGCAAGGAGT+TGG + chr7.1:40496411-40496430 MS.gene055303:CDS 50.0%
! TTAGCCTTCAAGCGACACAC+GGG + chr7.1:40495906-40495925 MS.gene055303:CDS 50.0%
AAGCCGAGTGGAGCTACAGT+TGG + chr7.1:40496486-40496505 MS.gene055303:CDS 55.0%
AAGTCGTCGGAGGGAGAAGA+TGG + chr7.1:40496522-40496541 MS.gene055303:CDS 55.0%
AGAGAAGGCAAGTCGTCGGA+GGG + chr7.1:40496513-40496532 MS.gene055303:CDS 55.0%
CGATGCACAAGCACCTACTC+CGG + chr7.1:40496171-40496190 MS.gene055303:CDS 55.0%
CGGAGTAGGTGCTTGTGCAT+CGG - chr7.1:40496173-40496192 None:intergenic 55.0%
CTCCGGGATTGCTTCCTTCA+TGG + chr7.1:40496188-40496207 MS.gene055303:CDS 55.0%
CTGCTACTGTCGAGGGAGAT+AGG - chr7.1:40496273-40496292 None:intergenic 55.0%
CTTGGGAACGTAGCTCCACA+TGG + chr7.1:40496346-40496365 MS.gene055303:CDS 55.0%
GAAGGAAGCAATCCCGGAGT+AGG - chr7.1:40496187-40496206 None:intergenic 55.0%
GACAACGCGCCTCTTGTTCT+TGG + chr7.1:40496328-40496347 MS.gene055303:CDS 55.0%
GACACGAGGTTCCATTCCCT+AGG - chr7.1:40495767-40495786 None:intergenic 55.0%
GATGCACAAGCACCTACTCC+GGG + chr7.1:40496172-40496191 MS.gene055303:CDS 55.0%
TGTTCATGCGCTGAGACACG+AGG - chr7.1:40495781-40495800 None:intergenic 55.0%
TTCCCGGTCGAACTGCTAAG+AGG + chr7.1:40495957-40495976 MS.gene055303:CDS 55.0%
! AGAACAAGAGGCGCGTTGTC+CGG - chr7.1:40496328-40496347 None:intergenic 55.0%
!! TGTTCCCGTGTGTCGCTTGA+AGG - chr7.1:40495913-40495932 None:intergenic 55.0%
AGATAGGCAGCGGTGGAGAG+CGG + chr7.1:40495700-40495719 MS.gene055303:CDS 60.0%
AGTTCGACCGGGAACTTGCG+CGG - chr7.1:40495951-40495970 None:intergenic 60.0%
CAGAGAAGGCAAGTCGTCGG+AGG + chr7.1:40496512-40496531 MS.gene055303:CDS 60.0%
GATGCAACCGGTACGAGGAC+CGG + chr7.1:40496306-40496325 MS.gene055303:CDS 60.0%
GGCATGGAGGTTAAGCCGAG+TGG + chr7.1:40496474-40496493 MS.gene055303:CDS 60.0%
TCGTCGGAGGGAGAAGATGG+AGG + chr7.1:40496525-40496544 MS.gene055303:CDS 60.0%
!! CCTCGTACCGGTTGCATCCA+CGG - chr7.1:40496304-40496323 None:intergenic 60.0%
ACCGGTTGCATCCACGGAGG+AGG - chr7.1:40496298-40496317 None:intergenic 65.0%
CCGTGGATGCAACCGGTACG+AGG + chr7.1:40496301-40496320 MS.gene055303:CDS 65.0%
GCCTCCTCCGTGGATGCAAC+CGG + chr7.1:40496294-40496313 MS.gene055303:CDS 65.0%
GCGTTGTCCGGTCCTCGTAC+CGG - chr7.1:40496316-40496335 None:intergenic 65.0%
!! AGGAGGCGCTGCTACTGTCG+AGG - chr7.1:40496281-40496300 None:intergenic 65.0%
!! CGTACCGGTTGCATCCACGG+AGG - chr7.1:40496301-40496320 None:intergenic 65.0%
!! GGAGGCGCTGCTACTGTCGA+GGG - chr7.1:40496280-40496299 None:intergenic 65.0%
CAGTAGCAGCGCCTCCTCCG+TGG + chr7.1:40496284-40496303 MS.gene055303:CDS 70.0%
GCAGCGGTGGAGAGCGGAAG+AGG + chr7.1:40495706-40495725 MS.gene055303:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 40495686 40496765 40495686 ID=MS.gene055303
chr7.1 mRNA 40495686 40496765 40495686 ID=MS.gene055303.t1;Parent=MS.gene055303
chr7.1 exon 40495686 40496765 40495686 ID=MS.gene055303.t1.exon1;Parent=MS.gene055303.t1
chr7.1 CDS 40495686 40496765 40495686 ID=cds.MS.gene055303.t1;Parent=MS.gene055303.t1
Gene Sequence

>MS.gene055303

ATGTCGGATATGAAAGATAGGCAGCGGTGGAGAGCGGAAGAGGATGCATTATTACGCGCTTATGTCAAACAGTACGGTCCTAGGGAATGGAACCTCGTGTCTCAGCGCATGAACACGCCTCTTAACAGGGACGCAAAATCGTGTTTAGAAAGGTGGAAGAATTACCTCAAGCCAGGTATTAAGAAAGGTTCTCTCACTGAAGAAGAGCAACGTCTTGTCATTAGCCTTCAAGCGACACACGGGAACAAATGGAAGAAAATTGCCGCGCAAGTTCCCGGTCGAACTGCTAAGAGGTTAGGGAAGTGGTGGGAAGTATTCAAAGAAAAGCAGCAGAGAGAAACAAAAGGTAGTATTAACAGAAACGTCGACCCGATTAACGATAGCAAGTACGAACACATACTCGAAAGTTTTGCCGAGAAACTAGTAAAAGAGAGACCCTCGCCTTCATTTGTCATGGCTGCTTCCAATAGTTCTTATCTGCATACCGATGCACAAGCACCTACTCCGGGATTGCTTCCTTCATGGCTATCGAATTCAAACAATGCAGCTCCTGTTAGGCCAAATTCACCATCAGTGACACTTAGCCTATCTCCCTCGACAGTAGCAGCGCCTCCTCCGTGGATGCAACCGGTACGAGGACCGGACAACGCGCCTCTTGTTCTTGGGAACGTAGCTCCACATGGCGCTGTTCTAAGTTACGGCGAAAGCATGGTAATGTCTGAGTTGGTTGATTGCTGCAAGGAGTTGGAAGAAGTGCATCATGCATTGGCAGCACATAAGAAAGAGGCGGCATGGAGGTTAAGCCGAGTGGAGCTACAGTTGGAGTCAGAGAAGGCAAGTCGTCGGAGGGAGAAGATGGAGGAAATCGAAGCAAAGATAAAAGCTTTAAGGGAGGAACAAGCAGTTGCTTTGGATAGAATTGAAGGAGAATATAGGGAACAGTTAGCAGGGCTGAGAAGAGATGCTGAAACCAAAGAGCAGAAATTGACTGAACAATGGGCTGCGAAGCATTTGCGCCTTACTAAGTTTCTAGAACAAGTAGGGTGTAGATCAAGGCATGCTGAATCAAATGGAAGATAG

Protein sequence

>MS.gene055303.t1

MSDMKDRQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVISLQATHGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQRETKGSINRNVDPINDSKYEHILESFAEKLVKERPSPSFVMAASNSSYLHTDAQAPTPGLLPSWLSNSNNAAPVRPNSPSVTLSLSPSTVAAPPPWMQPVRGPDNAPLVLGNVAPHGAVLSYGESMVMSELVDCCKELEEVHHALAAHKKEAAWRLSRVELQLESEKASRRREKMEEIEAKIKALREEQAVALDRIEGEYREQLAGLRRDAETKEQKLTEQWAAKHLRLTKFLEQVGCRSRHAESNGR