Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93599.t1 | XP_003621704.1 | 99.7 | 339 | 1 | 0 | 1 | 339 | 1 | 339 | 4.20E-188 | 667.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93599.t1 | Q9C5Z2 | 82.9 | 334 | 56 | 1 | 5 | 337 | 3 | 336 | 1.6e-159 | 563.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93599.t1 | A2Q5B8 | 99.7 | 339 | 1 | 0 | 1 | 339 | 1 | 339 | 3.0e-188 | 667.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93599 | MS.gene26707 | PPI |
| MS.gene26620 | MS.gene93599 | PPI |
| MS.gene93599 | MS.gene030238 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93599.t1 | MTR_7g021870 | 99.705 | 339 | 1 | 0 | 1 | 339 | 1 | 339 | 0.0 | 703 |
| MS.gene93599.t1 | MTR_7g064210 | 73.770 | 61 | 2 | 1 | 67 | 127 | 181 | 227 | 5.30e-18 | 84.7 |
| MS.gene93599.t1 | MTR_2g022940 | 73.684 | 57 | 1 | 1 | 71 | 127 | 1 | 43 | 2.81e-17 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93599.t1 | AT1G10840 | 82.934 | 334 | 56 | 1 | 5 | 337 | 3 | 336 | 0.0 | 578 |
| MS.gene93599.t1 | AT1G10840 | 83.936 | 249 | 40 | 0 | 89 | 337 | 1 | 249 | 7.38e-156 | 437 |
Find 88 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGGCCAGCGGCTTGAAAA+TGG | 0.195500 | 7.3:+77806002 | None:intergenic |
| CATCATTTCAAGCTGGTAAT+TGG | 0.226228 | 7.3:+77809650 | None:intergenic |
| TTGATGTTCTGCAGGGTTGC+TGG | 0.236004 | 7.3:-77805669 | MS.gene93599:intron |
| TTAGTCACTGGACAACTTCT+TGG | 0.276228 | 7.3:-77809863 | MS.gene93599:CDS |
| AGCTCTGCGTGCCATGTTAT+CGG | 0.309858 | 7.3:+77806065 | None:intergenic |
| ACCTGGGTGACTGGAGTATC+AGG | 0.313964 | 7.3:+77807818 | None:intergenic |
| TTCAGTTTCAATTCCATTAC+CGG | 0.316223 | 7.3:-77807537 | MS.gene93599:intron |
| TCGGCCAGCGGCTTGAAAAT+GGG | 0.322632 | 7.3:+77806003 | None:intergenic |
| GGCTTGAAAATGGGGTTTGC+AGG | 0.323151 | 7.3:+77806012 | None:intergenic |
| TTCACTAATGGAGAGAAATA+TGG | 0.325096 | 7.3:-77807684 | MS.gene93599:CDS |
| TACAATGCTTAATTATCTTC+AGG | 0.338733 | 7.3:+77809903 | None:intergenic |
| TGGAAATTTGATTTGTTATG+AGG | 0.341946 | 7.3:+77805959 | None:intergenic |
| TATTACCTGGTAATTCATAA+AGG | 0.352372 | 7.3:+77809425 | None:intergenic |
| ATTGATTTGGTTGCAATAGT+TGG | 0.358364 | 7.3:+77805939 | None:intergenic |
| AACATGGCACGCAGAGCTGC+TGG | 0.364111 | 7.3:-77806060 | MS.gene93599:CDS |
| GAAGCTTTCAGACTCATTCA+TGG | 0.372018 | 7.3:-77808613 | MS.gene93599:CDS |
| CTTGTCCATTGAACAACAAA+AGG | 0.384746 | 7.3:-77807636 | MS.gene93599:intron |
| ACCCCTTGATCAGCCCTTGA+TGG | 0.392820 | 7.3:+77808654 | None:intergenic |
| ATTATCAACCAGTTCACTAA+TGG | 0.395048 | 7.3:-77807696 | MS.gene93599:CDS |
| ATTTCTCTCCATTAGTGAAC+TGG | 0.398334 | 7.3:+77807688 | None:intergenic |
| AAGGGATACCATACCGGAAA+AGG | 0.400259 | 7.3:+77809800 | None:intergenic |
| AACTATTGCAACCAAATCAA+TGG | 0.406690 | 7.3:-77805937 | MS.gene93599:CDS |
| TTGTAGTTTACCTGGGTGAC+TGG | 0.419136 | 7.3:+77807809 | None:intergenic |
| GCAGATGAGGGAAGAGGATG+AGG | 0.421135 | 7.3:-77809691 | MS.gene93599:intron |
| TGATGTTCTGCAGGGTTGCT+GGG | 0.429580 | 7.3:-77805668 | MS.gene93599:intron |
| CAGTCATAAAAGCACTGATA+AGG | 0.449414 | 7.3:+77807849 | None:intergenic |
| AGTTGTTCAGATGGAAGGAT+TGG | 0.452989 | 7.3:-77810600 | MS.gene93599:intron |
| ACTCTCAAGTCGTGATGGTT+CGG | 0.456933 | 7.3:+77805984 | None:intergenic |
| CACTGGACAACTTCTTGGAT+TGG | 0.458201 | 7.3:-77809858 | MS.gene93599:CDS |
| CAGTTTGATATGAGCCAAGC+AGG | 0.458895 | 7.3:+77809463 | None:intergenic |
| CCGGAGCTTGTCTCGTCAGC+AGG | 0.463217 | 7.3:-77807518 | MS.gene93599:CDS |
| TCCATCTGAACAACTCTAAG+AGG | 0.468041 | 7.3:+77810608 | None:intergenic |
| AGCAGGCTCAGCAGCAAGCA+TGG | 0.469026 | 7.3:-77807501 | MS.gene93599:CDS |
| ATGAGCCAAGCAGGGTAGAC+TGG | 0.471240 | 7.3:+77809472 | None:intergenic |
| GCATAATATATGACCCATCA+AGG | 0.475414 | 7.3:-77808668 | MS.gene93599:CDS |
| CACTCACCTTCTTTAGTCAC+TGG | 0.478333 | 7.3:-77809875 | MS.gene93599:CDS |
| CGGCCAGCGGCTTGAAAATG+GGG | 0.479426 | 7.3:+77806004 | None:intergenic |
| GCAGGATCTTCCTCGGGTAA+AGG | 0.479465 | 7.3:+77806030 | None:intergenic |
| GAAGATAATTAAGCATTGTA+AGG | 0.480417 | 7.3:-77809900 | MS.gene93599:CDS |
| GACGAGACAAGCTCCGGTAA+TGG | 0.482758 | 7.3:+77807524 | None:intergenic |
| GCTTCAACGCCTTCAGAGCT+AGG | 0.489562 | 7.3:+77808631 | None:intergenic |
| CTTAGAGTTGTTCAGATGGA+AGG | 0.493585 | 7.3:-77810605 | MS.gene93599:CDS |
| CAACTTCTTGGATTGGATGT+TGG | 0.499911 | 7.3:-77809851 | MS.gene93599:CDS |
| GGGGTTTGCAGGATCTTCCT+CGG | 0.502079 | 7.3:+77806023 | None:intergenic |
| TGAGGGAGAAGAACTTATCA+TGG | 0.503462 | 7.3:-77808469 | MS.gene93599:CDS |
| TCAAGCTGTTGCAACGGAAG+AGG | 0.504590 | 7.3:-77810639 | MS.gene93599:CDS |
| AGTCATAAAAGCACTGATAA+GGG | 0.508843 | 7.3:+77807850 | None:intergenic |
| ACTATTGCAACCAAATCAAT+GGG | 0.512648 | 7.3:-77805936 | MS.gene93599:intron |
| TAACAGACTTTATTTGCTGA+AGG | 0.513759 | 7.3:-77805637 | MS.gene93599:CDS |
| CATATGAAATAATAGATTGA+GGG | 0.521229 | 7.3:-77808486 | MS.gene93599:intron |
| AGTTGTCCAGTGACTAAAGA+AGG | 0.523423 | 7.3:+77809869 | None:intergenic |
| GACCCATCAAGGGCTGATCA+AGG | 0.524561 | 7.3:-77808657 | MS.gene93599:CDS |
| ACCCATCAAGGGCTGATCAA+GGG | 0.525854 | 7.3:-77808656 | MS.gene93599:CDS |
| ACATGGCACGCAGAGCTGCT+GGG | 0.528743 | 7.3:-77806059 | MS.gene93599:CDS |
| GGGTTTGCAGGATCTTCCTC+GGG | 0.530656 | 7.3:+77806024 | None:intergenic |
| AGGGATACCATACCGGAAAA+GGG | 0.535713 | 7.3:+77809801 | None:intergenic |
| ATCATGGGTGGACATCTTCG+AGG | 0.535926 | 7.3:-77808453 | MS.gene93599:CDS |
| CCCCTTGATCAGCCCTTGAT+GGG | 0.536856 | 7.3:+77808655 | None:intergenic |
| AGTCGTGATGGTTCGGCCAG+CGG | 0.542936 | 7.3:+77805991 | None:intergenic |
| TCCTCTTAGAGTTGTTCAGA+TGG | 0.548192 | 7.3:-77810609 | MS.gene93599:CDS |
| AGGTACCAGTCTACCCTGCT+TGG | 0.548620 | 7.3:-77809477 | MS.gene93599:CDS |
| AAGCATGGCTTCAGAAGAGA+AGG | 0.549881 | 7.3:-77807486 | MS.gene93599:intron |
| CATGGCACGCAGAGCTGCTG+GGG | 0.550315 | 7.3:-77806058 | MS.gene93599:CDS |
| AAATTTGCAGATGAGGGAAG+AGG | 0.550961 | 7.3:-77809697 | MS.gene93599:intron |
| CCTGCTGACGAGACAAGCTC+CGG | 0.563447 | 7.3:+77807518 | None:intergenic |
| GCTGAAGGCTTTGCATGAGG+AGG | 0.564403 | 7.3:-77805622 | MS.gene93599:CDS |
| TGAAACCTTTATGAATTACC+AGG | 0.564604 | 7.3:-77809430 | MS.gene93599:intron |
| CCCATCAAGGGCTGATCAAG+GGG | 0.569340 | 7.3:-77808655 | MS.gene93599:CDS |
| TTATTACAGGGCCGATAACA+TGG | 0.571182 | 7.3:-77806076 | MS.gene93599:intron |
| AGCACCTCATCATTTCAAGC+TGG | 0.578673 | 7.3:+77809643 | None:intergenic |
| TCAAGGGGTCCTAGCTCTGA+AGG | 0.582181 | 7.3:-77808640 | MS.gene93599:CDS |
| AATGTGGACAATAATACCGT+TGG | 0.593681 | 7.3:-77809609 | MS.gene93599:CDS |
| TTTGCTGAAGGCTTTGCATG+AGG | 0.596130 | 7.3:-77805625 | MS.gene93599:CDS |
| ATTTCTTCAAGCTGTTGCAA+CGG | 0.609939 | 7.3:-77810645 | MS.gene93599:CDS |
| AGGAAACTCTCAAGTCGTGA+TGG | 0.615644 | 7.3:+77805979 | None:intergenic |
| ACCTGATACTCCAGTCACCC+AGG | 0.616375 | 7.3:-77807819 | MS.gene93599:intron |
| GGAGAAGAACTTATCATGGG+TGG | 0.622548 | 7.3:-77808465 | MS.gene93599:CDS |
| CATAATATATGACCCATCAA+GGG | 0.628074 | 7.3:-77808667 | MS.gene93599:CDS |
| GAGGGAGAAGAACTTATCAT+GGG | 0.629094 | 7.3:-77808468 | MS.gene93599:CDS |
| ATTACCAGCTTGAAATGATG+AGG | 0.641532 | 7.3:-77809647 | MS.gene93599:CDS |
| TGGACAATAATACCGTTGGA+TGG | 0.649223 | 7.3:-77809605 | MS.gene93599:intron |
| AAATCATACATACCATCCAA+CGG | 0.673715 | 7.3:+77809593 | None:intergenic |
| TGGGGAAGAGCCTTTACCCG+AGG | 0.681168 | 7.3:-77806040 | MS.gene93599:CDS |
| GCTTGGCTCATATCAAACTG+TGG | 0.682062 | 7.3:-77809460 | MS.gene93599:CDS |
| AGTTTGATATGAGCCAAGCA+GGG | 0.685374 | 7.3:+77809464 | None:intergenic |
| GATGAGGAAATTGAAGCTGA+TGG | 0.687478 | 7.3:-77809675 | MS.gene93599:CDS |
| AATGATGAGGTGCTTGAGAG+AGG | 0.697805 | 7.3:-77809634 | MS.gene93599:CDS |
| GTGCTTGAGAGAGGTCAATG+TGG | 0.716267 | 7.3:-77809625 | MS.gene93599:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTTGTTTATAAAATAAA+AGG | + | chr7.3:77810212-77810231 | None:intergenic | 10.0% |
| !! | TTATCAATAGAAAAATTATT+TGG | + | chr7.3:77808226-77808245 | None:intergenic | 10.0% |
| !!! | TTTTATTTTATAAACAAATG+TGG | - | chr7.3:77810211-77810230 | MS.gene93599:intron | 10.0% |
| !! | AAAATAAACGAATAAAAAGA+AGG | + | chr7.3:77806599-77806618 | None:intergenic | 15.0% |
| !! | AAATAAACGAATAAAAAGAA+GGG | + | chr7.3:77806598-77806617 | None:intergenic | 15.0% |
| !! | ACCTTACAATAAAAAAATAA+TGG | + | chr7.3:77808971-77808990 | None:intergenic | 15.0% |
| !! | TTTGTAATTTCATATGTTTA+TGG | - | chr7.3:77805975-77805994 | MS.gene93599:CDS | 15.0% |
| !!! | ACTAAATTTAAAATAGACAA+AGG | + | chr7.3:77808609-77808628 | None:intergenic | 15.0% |
| !!! | TCCATTATTTTTTTATTGTA+AGG | - | chr7.3:77808967-77808986 | MS.gene93599:intron | 15.0% |
| !!! | TTGTTTTCTTAAAATGATAT+AGG | - | chr7.3:77806003-77806022 | MS.gene93599:CDS | 15.0% |
| !!! | TTTTTAACGATTTAATAATC+TGG | - | chr7.3:77807625-77807644 | MS.gene93599:intron | 15.0% |
| !! | AAAAGATTATACCATTTGAT+TGG | - | chr7.3:77807247-77807266 | MS.gene93599:intron | 20.0% |
| !! | AAAGATATATACCACTAATA+AGG | + | chr7.3:77810647-77810666 | None:intergenic | 20.0% |
| !! | AAATACTTTACAAACATACA+AGG | + | chr7.3:77806347-77806366 | None:intergenic | 20.0% |
| !! | AAGATATATACCACTAATAA+GGG | + | chr7.3:77810646-77810665 | None:intergenic | 20.0% |
| !! | AATAAGCTGAAAACAATTTA+TGG | - | chr7.3:77806213-77806232 | MS.gene93599:intron | 20.0% |
| !! | AATTAGTGAAGAGAAAAAAT+CGG | + | chr7.3:77805670-77805689 | None:intergenic | 20.0% |
| !! | ACTTATTAGAGTTTATCTAT+TGG | + | chr7.3:77806296-77806315 | None:intergenic | 20.0% |
| !! | ATAAATCAAGAAATATTACC+TGG | + | chr7.3:77806968-77806987 | None:intergenic | 20.0% |
| !! | CACATTAAATAGTAAATTAC+AGG | + | chr7.3:77807071-77807090 | None:intergenic | 20.0% |
| !! | CATATGAAATAATAGATTGA+GGG | - | chr7.3:77807891-77807910 | MS.gene93599:intron | 20.0% |
| !! | TCATATGAAATAATAGATTG+AGG | - | chr7.3:77807890-77807909 | MS.gene93599:intron | 20.0% |
| !! | TGAAAAATGTTGTCTTTATT+TGG | - | chr7.3:77805875-77805894 | MS.gene93599:intron | 20.0% |
| !! | TGTATAGTTATATGTTATTG+TGG | - | chr7.3:77807033-77807052 | MS.gene93599:intron | 20.0% |
| !! | TTAATTTAAGAATGTCCAAA+AGG | - | chr7.3:77807198-77807217 | MS.gene93599:intron | 20.0% |
| !! | TTCAAAATTACATAGCTTAA+GGG | + | chr7.3:77809832-77809851 | None:intergenic | 20.0% |
| !! | TTCATGTCATAAATTCAATT+GGG | - | chr7.3:77809276-77809295 | MS.gene93599:intron | 20.0% |
| !! | TTTCATGTCATAAATTCAAT+TGG | - | chr7.3:77809275-77809294 | MS.gene93599:intron | 20.0% |
| !!! | AAAAATGTTGTCTTTATTTG+GGG | - | chr7.3:77805877-77805896 | MS.gene93599:intron | 20.0% |
| !!! | AAGGATTGTAATTACATTTT+TGG | - | chr7.3:77809351-77809370 | MS.gene93599:intron | 20.0% |
| !!! | AGGATTGTAATTACATTTTT+GGG | - | chr7.3:77809352-77809371 | MS.gene93599:intron | 20.0% |
| !!! | CAAACTATTAATGTTTTTTC+AGG | - | chr7.3:77807665-77807684 | MS.gene93599:CDS | 20.0% |
| !!! | GAAAAATGTTGTCTTTATTT+GGG | - | chr7.3:77805876-77805895 | MS.gene93599:intron | 20.0% |
| !!! | GTTTAGATTTTCATTTAGTT+GGG | - | chr7.3:77808767-77808786 | MS.gene93599:intron | 20.0% |
| !!! | TATTGCATTTTTCTTTTGTA+TGG | - | chr7.3:77810186-77810205 | MS.gene93599:intron | 20.0% |
| !!! | TGATCACTTTATATTTTCAT+CGG | + | chr7.3:77808086-77808105 | None:intergenic | 20.0% |
| !!! | TGTTTAGATTTTCATTTAGT+TGG | - | chr7.3:77808766-77808785 | MS.gene93599:intron | 20.0% |
| !!! | TTTAGATTTTCATTTAGTTG+GGG | - | chr7.3:77808768-77808787 | MS.gene93599:intron | 20.0% |
| !!! | TTTGATTTAGCAAATTTAGA+TGG | - | chr7.3:77809407-77809426 | MS.gene93599:intron | 20.0% |
| !!! | TTTTGATAGGTTTTATTGTT+TGG | - | chr7.3:77805900-77805919 | MS.gene93599:intron | 20.0% |
| ! | AAAACCTGATTAAAACTTTC+TGG | - | chr7.3:77810615-77810634 | MS.gene93599:CDS | 25.0% |
| ! | AATTATCAGTTAATCGTTAG+AGG | + | chr7.3:77807354-77807373 | None:intergenic | 25.0% |
| ! | ATAATAGACTGAACTAATTG+AGG | + | chr7.3:77810267-77810286 | None:intergenic | 25.0% |
| ! | ATTGTAGTACAAAATTGACA+AGG | + | chr7.3:77809380-77809399 | None:intergenic | 25.0% |
| ! | ATTTCAAAAATTTGCAGATG+AGG | - | chr7.3:77806673-77806692 | MS.gene93599:intron | 25.0% |
| ! | CAAAATATTGTAGTTTACCT+GGG | + | chr7.3:77808578-77808597 | None:intergenic | 25.0% |
| ! | CTTCAAAATTACATAGCTTA+AGG | + | chr7.3:77809833-77809852 | None:intergenic | 25.0% |
| ! | TAAGCAGTTCAGAATTAAAT+AGG | + | chr7.3:77808460-77808479 | None:intergenic | 25.0% |
| ! | TAATCACTTATCTAACATGA+TGG | - | chr7.3:77806861-77806880 | MS.gene93599:intron | 25.0% |
| ! | TACAATGCTTAATTATCTTC+AGG | + | chr7.3:77806477-77806496 | None:intergenic | 25.0% |
| ! | TATTACCTGGTAATTCATAA+AGG | + | chr7.3:77806955-77806974 | None:intergenic | 25.0% |
| ! | TATTCATAAATGTGTGACAA+CGG | - | chr7.3:77807563-77807582 | MS.gene93599:intron | 25.0% |
| ! | TCAATTAGTTCAGTCTATTA+TGG | - | chr7.3:77810266-77810285 | MS.gene93599:intron | 25.0% |
| ! | TTAAGTTCTTTAACCAAACA+TGG | + | chr7.3:77806111-77806130 | None:intergenic | 25.0% |
| ! | TTGTAGTACAAAATTGACAA+GGG | + | chr7.3:77809379-77809398 | None:intergenic | 25.0% |
| ! | TTTAAGAGTAACCTTTAACT+TGG | + | chr7.3:77810491-77810510 | None:intergenic | 25.0% |
| ! | TTTAGATGGTTTGAAGATAA+AGG | - | chr7.3:77809421-77809440 | MS.gene93599:intron | 25.0% |
| ! | TTTCAAAAATTTGCAGATGA+GGG | - | chr7.3:77806674-77806693 | MS.gene93599:intron | 25.0% |
| !! | AGATAATTTTCAAACCATTC+TGG | - | chr7.3:77806417-77806436 | MS.gene93599:intron | 25.0% |
| !! | GAAGATAATTAAGCATTGTA+AGG | - | chr7.3:77806477-77806496 | MS.gene93599:intron | 25.0% |
| !! | TAAAAACATACCCATTGATT+TGG | + | chr7.3:77810454-77810473 | None:intergenic | 25.0% |
| !! | TAAGTAACTTTTAGCATTGT+AGG | - | chr7.3:77806046-77806065 | MS.gene93599:CDS | 25.0% |
| !! | TCAAATGGTATAATCTTTTG+TGG | + | chr7.3:77807246-77807265 | None:intergenic | 25.0% |
| !! | TGTTGAAATTTAGAATGTGT+AGG | - | chr7.3:77808264-77808283 | MS.gene93599:intron | 25.0% |
| !! | TTTGTAAAGTATTTGAAGCA+TGG | - | chr7.3:77806353-77806372 | MS.gene93599:intron | 25.0% |
| !!! | GGTATGTTTTTAGATTTTGA+TGG | - | chr7.3:77810462-77810481 | MS.gene93599:intron | 25.0% |
| !!! | TATGGTTTTGGTTATTTTAG+TGG | + | chr7.3:77810545-77810564 | None:intergenic | 25.0% |
| !!! | TGGAAATTTGATTTGTTATG+AGG | + | chr7.3:77810421-77810440 | None:intergenic | 25.0% |
| !!! | TTTCGGTTTTTGTTATTACA+GGG | - | chr7.3:77810289-77810308 | MS.gene93599:intron | 25.0% |
| AAATCATACATACCATCCAA+CGG | + | chr7.3:77806787-77806806 | None:intergenic | 30.0% | |
| AACTATTGCAACCAAATCAA+TGG | - | chr7.3:77810440-77810459 | MS.gene93599:intron | 30.0% | |
| ACTATTGCAACCAAATCAAT+GGG | - | chr7.3:77810441-77810460 | MS.gene93599:intron | 30.0% | |
| AGTTCAGTCTATTATGGTTT+CGG | - | chr7.3:77810272-77810291 | MS.gene93599:intron | 30.0% | |
| ATCAGAATGCTAAATCAACT+GGG | - | chr7.3:77809133-77809152 | MS.gene93599:intron | 30.0% | |
| ATGATAAGTAGCCAATCAAA+TGG | + | chr7.3:77807261-77807280 | None:intergenic | 30.0% | |
| ATGGATAATTCTCTGAATCT+AGG | - | chr7.3:77806880-77806899 | MS.gene93599:intron | 30.0% | |
| ATTATCAACCAGTTCACTAA+TGG | - | chr7.3:77808681-77808700 | MS.gene93599:CDS | 30.0% | |
| CATAATATATGACCCATCAA+GGG | - | chr7.3:77807710-77807729 | MS.gene93599:CDS | 30.0% | |
| CCAAATCATACATATGTAAG+TGG | + | chr7.3:77806818-77806837 | None:intergenic | 30.0% | |
| CCACTTACATATGTATGATT+TGG | - | chr7.3:77806815-77806834 | MS.gene93599:intron | 30.0% | |
| GAAAAAATCGGAAAAAAGAG+AGG | + | chr7.3:77805658-77805677 | None:intergenic | 30.0% | |
| GAAATTTGGACTAAACGTTA+AGG | - | chr7.3:77809533-77809552 | MS.gene93599:intron | 30.0% | |
| GAAGATTATGTGTTAACGTA+TGG | + | chr7.3:77809000-77809019 | None:intergenic | 30.0% | |
| GATTTACACGAAAATTTACC+TGG | - | chr7.3:77809561-77809580 | MS.gene93599:intron | 30.0% | |
| GCAAAATATTGTAGTTTACC+TGG | + | chr7.3:77808579-77808598 | None:intergenic | 30.0% | |
| GCTTCTAAGTTATTCAATCT+TGG | - | chr7.3:77807118-77807137 | MS.gene93599:intron | 30.0% | |
| GGATTGTAGTATAAGAATCT+TGG | - | chr7.3:77808124-77808143 | MS.gene93599:intron | 30.0% | |
| GTAGATAGGTTTCAATATGA+TGG | - | chr7.3:77809175-77809194 | MS.gene93599:intron | 30.0% | |
| GTTCAATTAGTTGAATTGTC+CGG | - | chr7.3:77810582-77810601 | MS.gene93599:intron | 30.0% | |
| GTTCAGAATTAAATAGGAAG+TGG | + | chr7.3:77808454-77808473 | None:intergenic | 30.0% | |
| TATACAAATCCACAAAACTC+TGG | + | chr7.3:77807019-77807038 | None:intergenic | 30.0% | |
| TATCAGAATGCTAAATCAAC+TGG | - | chr7.3:77809132-77809151 | MS.gene93599:intron | 30.0% | |
| TCTAATAAGTCAATCCAAAC+TGG | - | chr7.3:77806306-77806325 | MS.gene93599:intron | 30.0% | |
| TGAAACCTTTATGAATTACC+AGG | - | chr7.3:77806947-77806966 | MS.gene93599:intron | 30.0% | |
| TGATCAAAACACATTCATCA+TGG | - | chr7.3:77808100-77808119 | MS.gene93599:intron | 30.0% | |
| TGATTTAGCATTCTGATACA+CGG | + | chr7.3:77809130-77809149 | None:intergenic | 30.0% | |
| TGTCAACTAGACTATAATCT+TGG | - | chr7.3:77808428-77808447 | MS.gene93599:intron | 30.0% | |
| TTCACTAATGGAGAGAAATA+TGG | - | chr7.3:77808693-77808712 | MS.gene93599:CDS | 30.0% | |
| TTCAGTTTCAATTCCATTAC+CGG | - | chr7.3:77808840-77808859 | MS.gene93599:intron | 30.0% | |
| TTGCAATAACCTTTCAGTAA+TGG | + | chr7.3:77807153-77807172 | None:intergenic | 30.0% | |
| TTGTGAAGATCGAAATTCAT+TGG | + | chr7.3:77810096-77810115 | None:intergenic | 30.0% | |
| ! | GTGATGTATCTTAGGATTTT+GGG | - | chr7.3:77809861-77809880 | MS.gene93599:CDS | 30.0% |
| ! | TAACAGACTTTATTTGCTGA+AGG | - | chr7.3:77810740-77810759 | MS.gene93599:intron | 30.0% |
| ! | TATCGCAGCAATAATTTTAC+TGG | - | chr7.3:77807792-77807811 | MS.gene93599:intron | 30.0% |
| ! | TGTGATGTATCTTAGGATTT+TGG | - | chr7.3:77809860-77809879 | MS.gene93599:CDS | 30.0% |
| ! | TGTTTTCAGCTTATTTCCAT+AGG | + | chr7.3:77806208-77806227 | None:intergenic | 30.0% |
| ! | TTAGGAGTATGCTAGAAATT+TGG | - | chr7.3:77809519-77809538 | MS.gene93599:intron | 30.0% |
| !! | AACACCAGAAAGTTTTAATC+AGG | + | chr7.3:77810622-77810641 | None:intergenic | 30.0% |
| !! | AGTCATAAAAGCACTGATAA+GGG | + | chr7.3:77808530-77808549 | None:intergenic | 30.0% |
| !! | ATTGATTTGGTTGCAATAGT+TGG | + | chr7.3:77810441-77810460 | None:intergenic | 30.0% |
| !! | CTATGTAATTTTGAAGATGC+GGG | - | chr7.3:77809837-77809856 | MS.gene93599:CDS | 30.0% |
| !! | GCTATGTAATTTTGAAGATG+CGG | - | chr7.3:77809836-77809855 | MS.gene93599:CDS | 30.0% |
| !! | GGAATTTTTGATTGAATGCA+TGG | - | chr7.3:77808714-77808733 | MS.gene93599:intron | 30.0% |
| !! | GTTTTATTGTTTGGAATTGC+GGG | - | chr7.3:77805909-77805928 | MS.gene93599:intron | 30.0% |
| !! | TCTTTATTTGGGGTTTTGAT+AGG | - | chr7.3:77805887-77805906 | MS.gene93599:intron | 30.0% |
| !!! | ACAAACCTTTTGTTGTTCAA+TGG | + | chr7.3:77808749-77808768 | None:intergenic | 30.0% |
| !!! | AGTTTTTTGAAAAGCGTTGT+AGG | - | chr7.3:77809455-77809474 | MS.gene93599:CDS | 30.0% |
| !!! | GGTTTTATTGTTTGGAATTG+CGG | - | chr7.3:77805908-77805927 | MS.gene93599:intron | 30.0% |
| !!! | GTTTCGGTTTTTGTTATTAC+AGG | - | chr7.3:77810288-77810307 | MS.gene93599:intron | 30.0% |
| !!! | TCAGGTTTTAAAAACTGAAC+CGG | + | chr7.3:77810604-77810623 | None:intergenic | 30.0% |
| AAAAAGAAGGGATACCATAC+CGG | + | chr7.3:77806586-77806605 | None:intergenic | 35.0% | |
| AACCAAAAGATAACACCATC+AGG | + | chr7.3:77806444-77806463 | None:intergenic | 35.0% | |
| AAGCTATTAAAGAGAGCCTA+TGG | - | chr7.3:77806189-77806208 | MS.gene93599:intron | 35.0% | |
| AATGTGGACAATAATACCGT+TGG | - | chr7.3:77806768-77806787 | MS.gene93599:intron | 35.0% | |
| ACATACAAGGCTACATGAAA+TGG | + | chr7.3:77806334-77806353 | None:intergenic | 35.0% | |
| ACCAAAACCATAGTAAAGTC+TGG | - | chr7.3:77810553-77810572 | MS.gene93599:intron | 35.0% | |
| ACTAACATAAACCAGGAAAG+AGG | + | chr7.3:77806082-77806101 | None:intergenic | 35.0% | |
| AGATTGTTTGAGTGAGCTTA+TGG | + | chr7.3:77806259-77806278 | None:intergenic | 35.0% | |
| ATGATTTGACAATCGTCAGA+GGG | + | chr7.3:77809933-77809952 | None:intergenic | 35.0% | |
| ATTACCAGCTTGAAATGATG+AGG | - | chr7.3:77806730-77806749 | MS.gene93599:intron | 35.0% | |
| ATTTCTCTCCATTAGTGAAC+TGG | + | chr7.3:77808692-77808711 | None:intergenic | 35.0% | |
| ATTTCTTCAAGCTGTTGCAA+CGG | - | chr7.3:77805732-77805751 | MS.gene93599:intron | 35.0% | |
| ATTTGTGCCAGTGAAAATGT+AGG | - | chr7.3:77807408-77807427 | MS.gene93599:intron | 35.0% | |
| CATACAAGGCTACATGAAAT+GGG | + | chr7.3:77806333-77806352 | None:intergenic | 35.0% | |
| CATCATTTCAAGCTGGTAAT+TGG | + | chr7.3:77806730-77806749 | None:intergenic | 35.0% | |
| CCAGTTGAAACTTCAAACAA+TGG | + | chr7.3:77810041-77810060 | None:intergenic | 35.0% | |
| CGAAAATTTACCTGGTGAAA+AGG | - | chr7.3:77809569-77809588 | MS.gene93599:intron | 35.0% | |
| CTTGTCCATTGAACAACAAA+AGG | - | chr7.3:77808741-77808760 | MS.gene93599:intron | 35.0% | |
| GATTTAGCATTCTGATACAC+GGG | + | chr7.3:77809129-77809148 | None:intergenic | 35.0% | |
| GCATAATATATGACCCATCA+AGG | - | chr7.3:77807709-77807728 | MS.gene93599:CDS | 35.0% | |
| GGATTGCACTATAAGAATCT+TGG | - | chr7.3:77808351-77808370 | MS.gene93599:intron | 35.0% | |
| GGCTACTTATCATGATATTG+AGG | - | chr7.3:77807268-77807287 | MS.gene93599:intron | 35.0% | |
| GTAGACGAAGTTACTATGTT+AGG | - | chr7.3:77809501-77809520 | MS.gene93599:intron | 35.0% | |
| TACTCTTAAATCACTCGAAC+CGG | - | chr7.3:77810501-77810520 | MS.gene93599:intron | 35.0% | |
| TCAAAACACATTCATCATGG+TGG | - | chr7.3:77808103-77808122 | MS.gene93599:intron | 35.0% | |
| TCGGAAAAAAGAGAGGAAAA+TGG | + | chr7.3:77805651-77805670 | None:intergenic | 35.0% | |
| TCTTTAACCAAACATGGTCA+TGG | + | chr7.3:77806105-77806124 | None:intergenic | 35.0% | |
| TGCGAAAAACGAATCAACAA+TGG | + | chr7.3:77805698-77805717 | None:intergenic | 35.0% | |
| TGTCAACTAGACTGTAATCT+TGG | - | chr7.3:77808200-77808219 | MS.gene93599:intron | 35.0% | |
| TTCAAACAATGGCAACTTGA+TGG | + | chr7.3:77810030-77810049 | None:intergenic | 35.0% | |
| TTGTAGGAGCTCTATTATCT+AGG | - | chr7.3:77809471-77809490 | MS.gene93599:CDS | 35.0% | |
| TTGTGACGATACTTCTATGA+TGG | - | chr7.3:77809328-77809347 | MS.gene93599:intron | 35.0% | |
| ! | AACCATGATTAAGCACTGTT+TGG | + | chr7.3:77810677-77810696 | None:intergenic | 35.0% |
| ! | ACAACGGTGATTTTGTCATA+TGG | - | chr7.3:77807579-77807598 | MS.gene93599:intron | 35.0% |
| ! | ACCAGACTTTACTATGGTTT+TGG | + | chr7.3:77810557-77810576 | None:intergenic | 35.0% |
| ! | ATGTATCTTAGGATTTTGGG+TGG | - | chr7.3:77809864-77809883 | MS.gene93599:CDS | 35.0% |
| ! | CAACGGTGATTTTGTCATAT+GGG | - | chr7.3:77807580-77807599 | MS.gene93599:intron | 35.0% |
| ! | CCATTGTTTGAAGTTTCAAC+TGG | - | chr7.3:77810038-77810057 | MS.gene93599:intron | 35.0% |
| ! | CTTGATGGACAAAATCTAAG+TGG | + | chr7.3:77810015-77810034 | None:intergenic | 35.0% |
| ! | GATCTTCACAATATTGACTG+TGG | - | chr7.3:77810105-77810124 | MS.gene93599:intron | 35.0% |
| ! | TCAACTTCCTACATTTTCAC+TGG | + | chr7.3:77807418-77807437 | None:intergenic | 35.0% |
| ! | TTGCTATGGTTGATTTCAGT+GGG | - | chr7.3:77809216-77809235 | MS.gene93599:intron | 35.0% |
| ! | TTTGCTATGGTTGATTTCAG+TGG | - | chr7.3:77809215-77809234 | MS.gene93599:intron | 35.0% |
| ! | TTTTCTCTTGATGTTCTGCA+GGG | - | chr7.3:77810701-77810720 | MS.gene93599:intron | 35.0% |
| ! | TTTTTCTCTTGATGTTCTGC+AGG | - | chr7.3:77810700-77810719 | MS.gene93599:intron | 35.0% |
| !! | CAGTCATAAAAGCACTGATA+AGG | + | chr7.3:77808531-77808550 | None:intergenic | 35.0% |
| !! | CTCTGTTTGATTTTGCATCT+GGG | - | chr7.3:77805933-77805952 | MS.gene93599:intron | 35.0% |
| !! | GAGAAGTATGTGTTTTCTTC+TGG | - | chr7.3:77807816-77807835 | MS.gene93599:intron | 35.0% |
| !! | GGTGTTATCTTTTGGTTAAC+AGG | - | chr7.3:77806447-77806466 | MS.gene93599:intron | 35.0% |
| !! | TACATAGCTTAAGGGCATTT+GGG | + | chr7.3:77809824-77809843 | None:intergenic | 35.0% |
| !! | TCTCTGTTTGATTTTGCATC+TGG | - | chr7.3:77805932-77805951 | MS.gene93599:intron | 35.0% |
| !! | TTACATAGCTTAAGGGCATT+TGG | + | chr7.3:77809825-77809844 | None:intergenic | 35.0% |
| !! | TTTGATGGTGACCAAGTTAA+AGG | - | chr7.3:77810477-77810496 | MS.gene93599:intron | 35.0% |
| !!! | AGTTTTTAGCTGAAAACTCC+TGG | + | chr7.3:77809958-77809977 | None:intergenic | 35.0% |
| !!! | TTATTTTAGTGGTTCAGTCG+TGG | + | chr7.3:77810534-77810553 | None:intergenic | 35.0% |
| AAAAGAGAGCGAGAAAACCT+AGG | + | chr7.3:77807520-77807539 | None:intergenic | 40.0% | |
| AAATTTGCAGATGAGGGAAG+AGG | - | chr7.3:77806680-77806699 | MS.gene93599:intron | 40.0% | |
| AACCATAGCAAACACCACAA+CGG | + | chr7.3:77809207-77809226 | None:intergenic | 40.0% | |
| AAGTGGAAAAACAGAGCACA+TGG | + | chr7.3:77809998-77810017 | None:intergenic | 40.0% | |
| AATGAAGTATGCAGAGCTTG+TGG | + | chr7.3:77809255-77809274 | None:intergenic | 40.0% | |
| AATTGTGTCTTCGTGTCATG+TGG | - | chr7.3:77809713-77809732 | MS.gene93599:intron | 40.0% | |
| AGCCAAACAGTGCTTAATCA+TGG | - | chr7.3:77810672-77810691 | MS.gene93599:intron | 40.0% | |
| AGTTGTCCAGTGACTAAAGA+AGG | + | chr7.3:77806511-77806530 | None:intergenic | 40.0% | |
| AGTTGTTCAGATGGAAGGAT+TGG | - | chr7.3:77805777-77805796 | MS.gene93599:intron | 40.0% | |
| AGTTTGATATGAGCCAAGCA+GGG | + | chr7.3:77806916-77806935 | None:intergenic | 40.0% | |
| CAAAAGGCCAAACAAATACG+TGG | - | chr7.3:77807214-77807233 | MS.gene93599:intron | 40.0% | |
| CAAATTTCGGCACAATGAGA+TGG | + | chr7.3:77809753-77809772 | None:intergenic | 40.0% | |
| CAGATGTTAGCATTGTTCGT+TGG | - | chr7.3:77807318-77807337 | MS.gene93599:intron | 40.0% | |
| CATGATTTGACAATCGTCAG+AGG | + | chr7.3:77809934-77809953 | None:intergenic | 40.0% | |
| CATTCGTTCTCTTGGTAGAT+AGG | - | chr7.3:77809161-77809180 | MS.gene93599:intron | 40.0% | |
| CCTTGAACCAGACTTTACTA+TGG | + | chr7.3:77810563-77810582 | None:intergenic | 40.0% | |
| CTCTGACGATTGTCAAATCA+TGG | - | chr7.3:77809932-77809951 | MS.gene93599:intron | 40.0% | |
| CTGTATTCATTGTGACCACT+CGG | - | chr7.3:77809080-77809099 | MS.gene93599:intron | 40.0% | |
| CTTAGAGTTGTTCAGATGGA+AGG | - | chr7.3:77805772-77805791 | MS.gene93599:intron | 40.0% | |
| GAAGAATTCCTAGCAACATG+AGG | + | chr7.3:77806379-77806398 | None:intergenic | 40.0% | |
| GAAGCTTTCAGACTCATTCA+TGG | - | chr7.3:77807764-77807783 | MS.gene93599:intron | 40.0% | |
| GACTGAACTAATTGAGGACA+AGG | + | chr7.3:77810261-77810280 | None:intergenic | 40.0% | |
| GACTTGTAAAACATACCCAC+AGG | + | chr7.3:77809646-77809665 | None:intergenic | 40.0% | |
| GAGGGAGAAGAACTTATCAT+GGG | - | chr7.3:77807909-77807928 | MS.gene93599:intron | 40.0% | |
| GATGAGGAAATTGAAGCTGA+TGG | - | chr7.3:77806702-77806721 | MS.gene93599:intron | 40.0% | |
| GTCCATACCACGTATTTGTT+TGG | + | chr7.3:77807224-77807243 | None:intergenic | 40.0% | |
| TACATGAAATGGGTCCAGTT+TGG | + | chr7.3:77806323-77806342 | None:intergenic | 40.0% | |
| TCAGATGAGCCATTACTGAA+AGG | - | chr7.3:77807141-77807160 | MS.gene93599:intron | 40.0% | |
| TCCATCTGAACAACTCTAAG+AGG | + | chr7.3:77805772-77805791 | None:intergenic | 40.0% | |
| TCCTCTTAGAGTTGTTCAGA+TGG | - | chr7.3:77805768-77805787 | MS.gene93599:intron | 40.0% | |
| TCTCATTGTGCCGAAATTTG+CGG | - | chr7.3:77809753-77809772 | MS.gene93599:intron | 40.0% | |
| TGAGGGAGAAGAACTTATCA+TGG | - | chr7.3:77807908-77807927 | MS.gene93599:intron | 40.0% | |
| TGGACAATAATACCGTTGGA+TGG | - | chr7.3:77806772-77806791 | MS.gene93599:intron | 40.0% | |
| TGTTAGTCCATGACCATGTT+TGG | - | chr7.3:77806095-77806114 | MS.gene93599:intron | 40.0% | |
| TTAGTCACTGGACAACTTCT+TGG | - | chr7.3:77806514-77806533 | MS.gene93599:intron | 40.0% | |
| TTATTACAGGGCCGATAACA+TGG | - | chr7.3:77810301-77810320 | MS.gene93599:intron | 40.0% | |
| TTGTAAAACATACCCACAGG+TGG | + | chr7.3:77809643-77809662 | None:intergenic | 40.0% | |
| ! | CAACTTCTTGGATTGGATGT+TGG | - | chr7.3:77806526-77806545 | MS.gene93599:intron | 40.0% |
| ! | CACTTAAAGCCAGAGTTTTG+TGG | - | chr7.3:77807007-77807026 | MS.gene93599:intron | 40.0% |
| ! | CCATAGTAAAGTCTGGTTCA+AGG | - | chr7.3:77810560-77810579 | MS.gene93599:intron | 40.0% |
| ! | GACGATACTTCTATGATGGA+AGG | - | chr7.3:77809332-77809351 | MS.gene93599:intron | 40.0% |
| ! | GTCATGGACTAACATAAACC+AGG | + | chr7.3:77806089-77806108 | None:intergenic | 40.0% |
| ! | TACTAACTGCTTCCCTTTTC+CGG | - | chr7.3:77806564-77806583 | MS.gene93599:intron | 40.0% |
| !! | ACATAGCTTAAGGGCATTTG+GGG | + | chr7.3:77809823-77809842 | None:intergenic | 40.0% |
| !! | CACGTATTTGTTTGGCCTTT+TGG | + | chr7.3:77807216-77807235 | None:intergenic | 40.0% |
| !! | TATGATGGATTCATCCGTTG+TGG | - | chr7.3:77809190-77809209 | MS.gene93599:intron | 40.0% |
| !! | TCTGGTGTTACCCTTATTAG+TGG | - | chr7.3:77810633-77810652 | MS.gene93599:CDS | 40.0% |
| !!! | GTCCTGATGGTGTTATCTTT+TGG | - | chr7.3:77806439-77806458 | MS.gene93599:intron | 40.0% |
| AAGCATGGCTTCAGAAGAGA+AGG | - | chr7.3:77808891-77808910 | MS.gene93599:intron | 45.0% | |
| AAGGGATACCATACCGGAAA+AGG | + | chr7.3:77806580-77806599 | None:intergenic | 45.0% | |
| ACGATTGTCAAATCATGGCC+AGG | - | chr7.3:77809937-77809956 | MS.gene93599:intron | 45.0% | |
| ACTCTCAAGTCGTGATGGTT+CGG | + | chr7.3:77810396-77810415 | None:intergenic | 45.0% | |
| ACTGGCACAAATTTCTGCCT+CGG | + | chr7.3:77807400-77807419 | None:intergenic | 45.0% | |
| AGCACCTCATCATTTCAAGC+TGG | + | chr7.3:77806737-77806756 | None:intergenic | 45.0% | |
| AGGAAACTCTCAAGTCGTGA+TGG | + | chr7.3:77810401-77810420 | None:intergenic | 45.0% | |
| AGGGATACCATACCGGAAAA+GGG | + | chr7.3:77806579-77806598 | None:intergenic | 45.0% | |
| AGTGTGTGTTCCTATGGTCA+GGG | - | chr7.3:77809607-77809626 | MS.gene93599:CDS | 45.0% | |
| ATGCGGGTGTGATGTATCTT+AGG | - | chr7.3:77809853-77809872 | MS.gene93599:CDS | 45.0% | |
| ATTCATTGTGACCACTCGGT+AGG | - | chr7.3:77809084-77809103 | MS.gene93599:intron | 45.0% | |
| CACTCACCTTCTTTAGTCAC+TGG | - | chr7.3:77806502-77806521 | MS.gene93599:intron | 45.0% | |
| CACTGGACAACTTCTTGGAT+TGG | - | chr7.3:77806519-77806538 | MS.gene93599:intron | 45.0% | |
| CAGTTTGATATGAGCCAAGC+AGG | + | chr7.3:77806917-77806936 | None:intergenic | 45.0% | |
| CTTAAATCACTCGAACCGGA+AGG | - | chr7.3:77810505-77810524 | MS.gene93599:intron | 45.0% | |
| GCTTGGCTCATATCAAACTG+TGG | - | chr7.3:77806917-77806936 | MS.gene93599:intron | 45.0% | |
| GGAGAAGAACTTATCATGGG+TGG | - | chr7.3:77807912-77807931 | MS.gene93599:intron | 45.0% | |
| GGCCAAACAAATACGTGGTA+TGG | - | chr7.3:77807219-77807238 | MS.gene93599:intron | 45.0% | |
| GGTGAAAAGGATGCTGAGAT+TGG | - | chr7.3:77809582-77809601 | MS.gene93599:intron | 45.0% | |
| GTGCGACAAACCGCAAATTT+CGG | + | chr7.3:77809766-77809785 | None:intergenic | 45.0% | |
| GTGTGTATGTACCTCTTTCC+TGG | - | chr7.3:77806068-77806087 | MS.gene93599:CDS | 45.0% | |
| TAACACCATCAGGACCAGAA+TGG | + | chr7.3:77806434-77806453 | None:intergenic | 45.0% | |
| TCAAACCATTCTGGTCCTGA+TGG | - | chr7.3:77806426-77806445 | MS.gene93599:intron | 45.0% | |
| TGCTATTAAGCCCTGACCAT+AGG | + | chr7.3:77809620-77809639 | None:intergenic | 45.0% | |
| TGGCTTCAGAAGAGAAGGTA+TGG | - | chr7.3:77808896-77808915 | MS.gene93599:intron | 45.0% | |
| TTGTAGTTTACCTGGGTGAC+TGG | + | chr7.3:77808571-77808590 | None:intergenic | 45.0% | |
| TTTGCTGAAGGCTTTGCATG+AGG | - | chr7.3:77810752-77810771 | MS.gene93599:intron | 45.0% | |
| ! | AATGATGAGGTGCTTGAGAG+AGG | - | chr7.3:77806743-77806762 | MS.gene93599:intron | 45.0% |
| ! | ATCCGTTGTGGTGTTTGCTA+TGG | - | chr7.3:77809202-77809221 | MS.gene93599:intron | 45.0% |
| ! | ATCTCAGCATCCTTTTCACC+AGG | + | chr7.3:77809582-77809601 | None:intergenic | 45.0% |
| ! | CAGTGCTTTTATGACTGAGC+TGG | - | chr7.3:77808534-77808553 | MS.gene93599:intron | 45.0% |
| ! | GGGTTTTGCATTCGTTCTCT+TGG | - | chr7.3:77809153-77809172 | MS.gene93599:intron | 45.0% |
| ! | TTGGAGAGTGTGTGTTCCTA+TGG | - | chr7.3:77809601-77809620 | MS.gene93599:intron | 45.0% |
| !! | ACACTTTTGGGTCGCAATTG+TGG | - | chr7.3:77809784-77809803 | MS.gene93599:intron | 45.0% |
| !! | GTGCTTTTTGCATTGTTCCG+AGG | - | chr7.3:77807380-77807399 | MS.gene93599:intron | 45.0% |
| !! | TCGTTTGCTATTCACCACTC+TGG | + | chr7.3:77809684-77809703 | None:intergenic | 45.0% |
| AAATTCCCTAGCCTACCGAG+TGG | + | chr7.3:77809098-77809117 | None:intergenic | 50.0% | |
| AAGCATGGCCTCATGTTGCT+AGG | - | chr7.3:77806368-77806387 | MS.gene93599:intron | 50.0% | |
| ACCCATCAAGGGCTGATCAA+GGG | - | chr7.3:77807721-77807740 | MS.gene93599:intron | 50.0% | |
| AGCTCTGCGTGCCATGTTAT+CGG | + | chr7.3:77810315-77810334 | None:intergenic | 50.0% | |
| ATCATGGGTGGACATCTTCG+AGG | - | chr7.3:77807924-77807943 | MS.gene93599:intron | 50.0% | |
| GACAATCGTCAGAGGGCAAT+GGG | + | chr7.3:77809926-77809945 | None:intergenic | 50.0% | |
| GAGTGTGTGTTCCTATGGTC+AGG | - | chr7.3:77809606-77809625 | MS.gene93599:CDS | 50.0% | |
| GGAAAAACAGAGCACATGGC+AGG | + | chr7.3:77809994-77810013 | None:intergenic | 50.0% | |
| GGCTTAATAGCACCACCTGT+GGG | - | chr7.3:77809628-77809647 | MS.gene93599:CDS | 50.0% | |
| GGCTTGAAAATGGGGTTTGC+AGG | + | chr7.3:77810368-77810387 | None:intergenic | 50.0% | |
| GTAGCATGTTCTGTCCAGAG+TGG | - | chr7.3:77809667-77809686 | MS.gene93599:CDS | 50.0% | |
| GTGCTTGAGAGAGGTCAATG+TGG | - | chr7.3:77806752-77806771 | MS.gene93599:intron | 50.0% | |
| GTGTCATGTGGCTGGTATCT+AGG | - | chr7.3:77809725-77809744 | MS.gene93599:intron | 50.0% | |
| GTTCAGTCGTGGATTCCTTC+CGG | + | chr7.3:77810523-77810542 | None:intergenic | 50.0% | |
| TCAAGCTGTTGCAACGGAAG+AGG | - | chr7.3:77805738-77805757 | MS.gene93599:intron | 50.0% | |
| TGACAATCGTCAGAGGGCAA+TGG | + | chr7.3:77809927-77809946 | None:intergenic | 50.0% | |
| TGATGTTCTGCAGGGTTGCT+GGG | - | chr7.3:77810709-77810728 | MS.gene93599:intron | 50.0% | |
| TTGATGTTCTGCAGGGTTGC+TGG | - | chr7.3:77810708-77810727 | MS.gene93599:intron | 50.0% | |
| ! | ACTGCTTCCCTTTTCCGGTA+TGG | - | chr7.3:77806569-77806588 | MS.gene93599:intron | 50.0% |
| ! | CAAAGTTCCAGAGCGCTTAC+GGG | + | chr7.3:77807955-77807974 | None:intergenic | 50.0% |
| ! | CGTTTTTCGCAGCTGCAACT+AGG | - | chr7.3:77805707-77805726 | MS.gene93599:intron | 50.0% |
| ! | GCAAAGTTCCAGAGCGCTTA+CGG | + | chr7.3:77807956-77807975 | None:intergenic | 50.0% |
| ! | GCGGTTTGTCGCACACTTTT+GGG | - | chr7.3:77809772-77809791 | MS.gene93599:intron | 50.0% |
| ! | TGCGGTTTGTCGCACACTTT+TGG | - | chr7.3:77809771-77809790 | MS.gene93599:intron | 50.0% |
| !! | AAACCCCATTTTCAAGCCGC+TGG | - | chr7.3:77810370-77810389 | MS.gene93599:intron | 50.0% |
| ACCCCTTGATCAGCCCTTGA+TGG | + | chr7.3:77807726-77807745 | None:intergenic | 55.0% | |
| ACCTGATACTCCAGTCACCC+AGG | - | chr7.3:77808558-77808577 | MS.gene93599:intron | 55.0% | |
| AGGTACCAGTCTACCCTGCT+TGG | - | chr7.3:77806900-77806919 | MS.gene93599:intron | 55.0% | |
| ATCGTCAGAGGGCAATGGGT+TGG | + | chr7.3:77809922-77809941 | None:intergenic | 55.0% | |
| ATGAGCCAAGCAGGGTAGAC+TGG | + | chr7.3:77806908-77806927 | None:intergenic | 55.0% | |
| CCCATCAAGGGCTGATCAAG+GGG | - | chr7.3:77807722-77807741 | MS.gene93599:intron | 55.0% | |
| CCCCTTGATCAGCCCTTGAT+GGG | + | chr7.3:77807725-77807744 | None:intergenic | 55.0% | |
| GACCCATCAAGGGCTGATCA+AGG | - | chr7.3:77807720-77807739 | MS.gene93599:intron | 55.0% | |
| GACGAGACAAGCTCCGGTAA+TGG | + | chr7.3:77808856-77808875 | None:intergenic | 55.0% | |
| GAGCACATGGCAGGAGTTGA+TGG | + | chr7.3:77809985-77810004 | None:intergenic | 55.0% | |
| GAGCGAGAAAACCTAGGCAG+CGG | + | chr7.3:77807514-77807533 | None:intergenic | 55.0% | |
| GCAGATGAGGGAAGAGGATG+AGG | - | chr7.3:77806686-77806705 | MS.gene93599:intron | 55.0% | |
| GCAGGATCTTCCTCGGGTAA+AGG | + | chr7.3:77810350-77810369 | None:intergenic | 55.0% | |
| GCTGAAGGCTTTGCATGAGG+AGG | - | chr7.3:77810755-77810774 | MS.gene93599:intron | 55.0% | |
| GCTTCAACGCCTTCAGAGCT+AGG | + | chr7.3:77807749-77807768 | None:intergenic | 55.0% | |
| GGAAATTCCCGTAAGCGCTC+TGG | - | chr7.3:77807945-77807964 | MS.gene93599:intron | 55.0% | |
| GGGCTTAATAGCACCACCTG+TGG | - | chr7.3:77809627-77809646 | MS.gene93599:CDS | 55.0% | |
| GGGGTTTGCAGGATCTTCCT+CGG | + | chr7.3:77810357-77810376 | None:intergenic | 55.0% | |
| GGGTTTGCAGGATCTTCCTC+GGG | + | chr7.3:77810356-77810375 | None:intergenic | 55.0% | |
| GTGTCTTCGTGTCATGTGGC+TGG | - | chr7.3:77809717-77809736 | MS.gene93599:intron | 55.0% | |
| TCGGCCAGCGGCTTGAAAAT+GGG | + | chr7.3:77810377-77810396 | None:intergenic | 55.0% | |
| TGTGACCACTCGGTAGGCTA+GGG | - | chr7.3:77809090-77809109 | MS.gene93599:intron | 55.0% | |
| TTCGGCCAGCGGCTTGAAAA+TGG | + | chr7.3:77810378-77810397 | None:intergenic | 55.0% | |
| TTGTGACCACTCGGTAGGCT+AGG | - | chr7.3:77809089-77809108 | MS.gene93599:intron | 55.0% | |
| ! | ACCTGGGTGACTGGAGTATC+AGG | + | chr7.3:77808562-77808581 | None:intergenic | 55.0% |
| ! | TTATGCTGCTTCCGCTGCCT+AGG | - | chr7.3:77807500-77807519 | MS.gene93599:CDS | 55.0% |
| !! | TCAAGGGGTCCTAGCTCTGA+AGG | - | chr7.3:77807737-77807756 | MS.gene93599:intron | 55.0% |
| AACATGGCACGCAGAGCTGC+TGG | - | chr7.3:77810317-77810336 | MS.gene93599:intron | 60.0% | |
| ACATGGCACGCAGAGCTGCT+GGG | - | chr7.3:77810318-77810337 | MS.gene93599:intron | 60.0% | |
| AGCAGGCTCAGCAGCAAGCA+TGG | - | chr7.3:77808876-77808895 | MS.gene93599:intron | 60.0% | |
| CCTGCTGACGAGACAAGCTC+CGG | + | chr7.3:77808862-77808881 | None:intergenic | 60.0% | |
| CGGCCAGCGGCTTGAAAATG+GGG | + | chr7.3:77810376-77810395 | None:intergenic | 60.0% | |
| TGGGGAAGAGCCTTTACCCG+AGG | - | chr7.3:77810337-77810356 | MS.gene93599:intron | 60.0% | |
| ! | AGTCGTGATGGTTCGGCCAG+CGG | + | chr7.3:77810389-77810408 | None:intergenic | 60.0% |
| CATGGCACGCAGAGCTGCTG+GGG | - | chr7.3:77810319-77810338 | MS.gene93599:intron | 65.0% | |
| CCGGAGCTTGTCTCGTCAGC+AGG | - | chr7.3:77808859-77808878 | MS.gene93599:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 77805617 | 77810782 | 77805617 | ID=MS.gene93599 |
| chr7.3 | mRNA | 77805617 | 77810782 | 77805617 | ID=MS.gene93599.t1;Parent=MS.gene93599 |
| chr7.3 | exon | 77810770 | 77810782 | 77810770 | ID=MS.gene93599.t1.exon1;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77810770 | 77810782 | 77810770 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| chr7.3 | exon | 77810601 | 77810680 | 77810601 | ID=MS.gene93599.t1.exon2;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77810601 | 77810680 | 77810601 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| chr7.3 | exon | 77809814 | 77809930 | 77809814 | ID=MS.gene93599.t1.exon3;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77809814 | 77809930 | 77809814 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| chr7.3 | exon | 77809606 | 77809709 | 77809606 | ID=MS.gene93599.t1.exon4;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77809606 | 77809709 | 77809606 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| chr7.3 | exon | 77809431 | 77809497 | 77809431 | ID=MS.gene93599.t1.exon5;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77809431 | 77809497 | 77809431 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| chr7.3 | exon | 77808579 | 77808712 | 77808579 | ID=MS.gene93599.t1.exon6;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77808579 | 77808712 | 77808579 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| chr7.3 | exon | 77808445 | 77808493 | 77808445 | ID=MS.gene93599.t1.exon7;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77808445 | 77808493 | 77808445 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| chr7.3 | exon | 77807820 | 77807891 | 77807820 | ID=MS.gene93599.t1.exon8;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77807820 | 77807891 | 77807820 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| chr7.3 | exon | 77807637 | 77807738 | 77807637 | ID=MS.gene93599.t1.exon9;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77807637 | 77807738 | 77807637 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| chr7.3 | exon | 77807487 | 77807554 | 77807487 | ID=MS.gene93599.t1.exon10;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77807487 | 77807554 | 77807487 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| chr7.3 | exon | 77805937 | 77806089 | 77805937 | ID=MS.gene93599.t1.exon11;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77805937 | 77806089 | 77805937 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| chr7.3 | exon | 77805617 | 77805677 | 77805617 | ID=MS.gene93599.t1.exon12;Parent=MS.gene93599.t1 |
| chr7.3 | CDS | 77805617 | 77805677 | 77805617 | ID=cds.MS.gene93599.t1;Parent=MS.gene93599.t1 |
| Gene Sequence |
| Protein sequence |
