AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93824

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93824.t1 MTR_1g105605 98.391 746 8 1 1 742 1 746 0.0 1519
MS.gene93824.t1 MTR_3g084740 44.386 766 390 13 7 741 10 770 0.0 654
MS.gene93824.t1 MTR_8g011270 43.450 771 394 11 2 741 4 763 0.0 640
MS.gene93824.t1 MTR_3g084740 42.690 684 358 12 7 661 10 688 0.0 558
MS.gene93824.t1 MTR_6g452530 52.414 145 58 2 523 657 11 154 1.31e-42 152
MS.gene93824.t1 MTR_6g452520 52.414 145 58 2 523 657 11 154 1.64e-42 152
MS.gene93824.t1 MTR_6g452510 52.414 145 58 2 523 657 11 154 1.64e-42 152
MS.gene93824.t1 MTR_3g083830 40.928 237 64 8 226 460 32 194 5.98e-36 135
MS.gene93824.t1 MTR_7g110640 22.096 706 447 23 34 707 164 798 1.04e-20 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93824.t1 AT5G43670 61.230 797 251 8 1 742 1 794 0.0 1008
MS.gene93824.t1 AT3G23660 44.737 760 394 11 5 741 8 764 0.0 667
MS.gene93824.t1 AT3G23660 43.511 786 392 13 5 741 8 790 0.0 654
MS.gene93824.t1 AT1G05520 42.455 782 406 11 1 741 4 782 0.0 638
MS.gene93824.t1 AT4G14160 43.963 762 400 11 4 741 13 771 0.0 633
MS.gene93824.t1 AT4G14160 43.775 763 401 11 4 741 13 772 0.0 632
MS.gene93824.t1 AT2G21630 43.191 771 395 9 2 741 3 761 0.0 602
MS.gene93824.t1 AT4G14160 40.271 591 328 10 4 572 13 600 4.90e-142 431
MS.gene93824.t1 AT4G01810 22.399 692 438 20 51 707 200 827 5.67e-23 105
MS.gene93824.t1 AT4G01810 22.399 692 438 20 51 707 200 827 5.67e-23 105
MS.gene93824.t1 AT4G01810 22.399 692 438 20 51 707 200 827 5.67e-23 105

Find 194 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCCCAGCTCTGCATTTA+TGG 0.146142 1.2:-78368059 MS.gene93824:CDS
TTCCTTGTGGTGATCCATTA+TGG 0.166108 1.2:-78367518 MS.gene93824:CDS
TCCTTAAGTGGAACATAAAT+TGG 0.174012 1.2:+78367744 None:intergenic
CATTTGAATCCGATCAATTT+AGG 0.188915 1.2:-78368342 MS.gene93824:CDS
CTAAACTCACATTCTGAAAT+TGG 0.225580 1.2:+78368772 None:intergenic
CTGATGAAACTGCGTATTTC+CGG 0.234643 1.2:-78367688 MS.gene93824:CDS
ACTAATGATGTCAAAATTTC+GGG 0.240968 1.2:-78368235 MS.gene93824:CDS
TGTTCCAAAACAGGGATTTC+TGG 0.241058 1.2:-78368797 MS.gene93824:CDS
TACTAATGATGTCAAAATTT+CGG 0.242820 1.2:-78368236 MS.gene93824:CDS
AGAATCATGGTATTCACTTC+TGG 0.244413 1.2:-78368616 MS.gene93824:CDS
CACAATGGATTTCGTTGAAT+TGG 0.251009 1.2:-78370110 None:intergenic
TCCTTGTGGTGATCCATTAT+GGG 0.259198 1.2:-78367517 MS.gene93824:CDS
GGAACCAGAAATCCCTGTTT+TGG 0.272568 1.2:+78368793 None:intergenic
GGAACATAAATTGGGGATAA+AGG 0.273621 1.2:+78367753 None:intergenic
CTTCTTCCACTGAGCAATCT+TGG 0.278201 1.2:+78367493 None:intergenic
TTCTAAAATTCTCATGGTTT+GGG 0.281291 1.2:+78367453 None:intergenic
GTGTAGGTTGAATCATTATA+AGG 0.283660 1.2:+78367633 None:intergenic
CCCAATTTATGTTCCACTTA+AGG 0.287293 1.2:-78367745 MS.gene93824:CDS
TGTTAGAGACGTCAATAAAT+TGG 0.296694 1.2:+78367717 None:intergenic
TTTCTAAAATTCTCATGGTT+TGG 0.298952 1.2:+78367452 None:intergenic
CTAAATCTTGCAGTTTCTAT+AGG 0.313799 1.2:-78368495 MS.gene93824:CDS
TCGATTACCAATCACGTATC+TGG 0.316494 1.2:-78369904 MS.gene93824:CDS
TCTAGATCAATTGCAGATAC+TGG 0.318050 1.2:-78367231 MS.gene93824:CDS
GTCAAAATTTCGGGAGCTCT+TGG 0.333105 1.2:-78368226 MS.gene93824:CDS
AGGGATTGTTAGGTCTGATT+TGG 0.339917 1.2:+78370039 None:intergenic
CGGAAGGAAGAAGGATCTTC+TGG 0.343028 1.2:+78367794 None:intergenic
AGGTCTGATTTGGTTGTTGA+TGG 0.354224 1.2:+78370049 None:intergenic
AACTGTTCTGCATCCAGTTC+TGG 0.361114 1.2:+78367416 None:intergenic
TTTGATTACGTTTGATTCAA+TGG 0.371675 1.2:-78369642 MS.gene93824:CDS
GAGCAATCTTGGACCCATAA+TGG 0.371953 1.2:+78367504 None:intergenic
CCTTAAGTGGAACATAAATT+GGG 0.371980 1.2:+78367745 None:intergenic
CACATAGTCCCCAAACTTAG+AGG 0.376203 1.2:+78367817 None:intergenic
AACACAGCCTGTTCCAAAAC+AGG 0.376787 1.2:-78368806 MS.gene93824:CDS
TGGTTCGGATATCATCTTTA+CGG 0.381108 1.2:-78367276 MS.gene93824:CDS
TGATGGTTAGAGGGATTGTT+AGG 0.382749 1.2:+78370029 None:intergenic
GTGGCCCATCAAACGAATAT+TGG 0.386146 1.2:+78367606 None:intergenic
GTACCTGATCGGAAGAAAAT+TGG 0.386477 1.2:+78369558 None:intergenic
GAACATAAATTGGGGATAAA+GGG 0.387749 1.2:+78367754 None:intergenic
GTTGAATTGGAGGCAGTAGA+AGG 0.388619 1.2:-78370097 MS.gene93824:CDS
GGTGTGGACGGCTAATGTTC+AGG 0.396007 1.2:+78368845 None:intergenic
ACTTCTGGGCCTGCTACTCT+TGG 0.397015 1.2:-78368601 MS.gene93824:CDS
GAATCATGGTATTCACTTCT+GGG 0.404127 1.2:-78368615 MS.gene93824:CDS
AAAGCAACAAGAGCAGTATC+AGG 0.409675 1.2:+78369662 None:intergenic
ATCAATTTAGGAAATGTCTA+AGG 0.415893 1.2:-78368330 MS.gene93824:CDS
CGGAAATACGCAGTTTCATC+AGG 0.417657 1.2:+78367689 None:intergenic
CTGAACCATAAATGCAGAGC+TGG 0.420001 1.2:+78368054 None:intergenic
TTCATTCTACGTATAACTTC+AGG 0.421752 1.2:-78368726 MS.gene93824:CDS
TTGCAGCTCCAGTGGACCTC+GGG 0.424808 1.2:+78368689 None:intergenic
AGAACAGTTGGTGGCTGAAC+GGG 0.425965 1.2:-78367402 MS.gene93824:CDS
GCTGTTGGAAGCTCCAGAAC+TGG 0.430961 1.2:-78367429 MS.gene93824:CDS
TGAGCGCTCGGGTGGATTTG+TGG 0.435162 1.2:-78368377 MS.gene93824:CDS
CAAGATAGAATCGGGGCAAA+TGG 0.435352 1.2:+78367556 None:intergenic
ATTAGTAGTCACTATTTCAA+TGG 0.435439 1.2:+78368252 None:intergenic
TCCGTTGGTCATGGAATTCA+TGG 0.445862 1.2:-78370072 MS.gene93824:CDS
AAATCCACCCGAGCGCTCAA+TGG 0.446015 1.2:+78368381 None:intergenic
GTTAGAGACGTCAATAAATT+GGG 0.449613 1.2:+78367718 None:intergenic
ATGCCCGTGATGTTGTTAGA+TGG 0.450547 1.2:-78367865 MS.gene93824:CDS
AGAAGCAGCAGCTTCGGTTA+TGG 0.452065 1.2:-78367921 MS.gene93824:CDS
AGGGTTACGTTGAGAACAAA+AGG 0.452981 1.2:+78369874 None:intergenic
ATCAAAGAGCAAGATAGAAT+CGG 0.454307 1.2:+78367547 None:intergenic
TTGATCGGATTCAAATGATT+CGG 0.454750 1.2:+78368348 None:intergenic
CGTCCACACCAGCTGCATAC+TGG 0.456155 1.2:-78368832 MS.gene93824:CDS
TGATCAAGAAGCAGCAGCTT+CGG 0.456711 1.2:-78367927 MS.gene93824:CDS
ACGGTACAGGCAGGGGAACA+TGG 0.459727 1.2:-78368023 MS.gene93824:CDS
GCTGCAATTTCAGCTGCCAT+TGG 0.460310 1.2:-78368673 MS.gene93824:CDS
CATTCCACAGATATTGCTGC+TGG 0.461956 1.2:-78367953 MS.gene93824:CDS
TGGTCACATCTTATAACCTT+TGG 0.463433 1.2:+78367371 None:intergenic
CCCCAAACTTAGAGGTAAAA+CGG 0.465443 1.2:+78367825 None:intergenic
TCAAAGAGCAAGATAGAATC+GGG 0.465693 1.2:+78367548 None:intergenic
TGTAGGTTGAATCATTATAA+GGG 0.466734 1.2:+78367634 None:intergenic
GTTTATAACACGGTACAGGC+AGG 0.471778 1.2:-78368032 MS.gene93824:CDS
ACACGTCTCTGCTCGGAGAA+TGG 0.475673 1.2:+78367889 None:intergenic
TGGTCTGTTTATCATTAACT+TGG 0.475694 1.2:+78368083 None:intergenic
AATGTCATTGTGGGTTCTCA+TGG 0.475832 1.2:+78368543 None:intergenic
TTCAACATACACAGATGGTT+CGG 0.479217 1.2:-78367291 MS.gene93824:CDS
AATCCACCCGAGCGCTCAAT+GGG 0.481475 1.2:+78368382 None:intergenic
CCCATTGAAAATGTCATTGT+GGG 0.482404 1.2:+78368534 None:intergenic
TGGTAATCGAGACGAGCGTA+AGG 0.486726 1.2:+78369917 None:intergenic
TAGACATTTCCTAAATTGAT+CGG 0.487637 1.2:+78368333 None:intergenic
TCGAGAACCCATTGAGCGCT+CGG 0.488153 1.2:-78368389 MS.gene93824:CDS
AAATGCAGAGCTGGGCTGAA+TGG 0.489105 1.2:+78368063 None:intergenic
GAAGAAGCTTGGTTATGATA+AGG 0.491651 1.2:-78367477 MS.gene93824:CDS
CTGAACCGCGAAGGAGTAGT+TGG 0.492465 1.2:-78367659 MS.gene93824:CDS
AATGGATTTCGTTGAATTGG+AGG 0.494230 1.2:-78370107 MS.gene93824:CDS
AGTCCAGGTCCAAGAGTAGC+AGG 0.496349 1.2:+78368592 None:intergenic
GTGCAGAGGAGAGGATCGTA+AGG 0.498794 1.2:+78369962 None:intergenic
GTGTTTGTCCAGTATGCAGC+TGG 0.501667 1.2:+78368824 None:intergenic
CAGCAACTCCAACTTGGTCA+AGG 0.503030 1.2:+78368416 None:intergenic
ACCATGCAAAAGAACGATCC+TGG 0.504166 1.2:+78369586 None:intergenic
ACAGCTTTCTAAAATTCTCA+TGG 0.505567 1.2:+78367447 None:intergenic
ATGTGACCAGCATAGTAGTC+AGG 0.507191 1.2:-78367357 MS.gene93824:CDS
CATCTTATAACCTTTGGCAC+TGG 0.507470 1.2:+78367377 None:intergenic
GCTTGCTCCCTTGACCAAGT+TGG 0.508759 1.2:-78368424 MS.gene93824:CDS
TAAATTGGGATCTCCTTAAG+TGG 0.510541 1.2:+78367732 None:intergenic
AGAGGATCGTAAGGGAGAAG+AGG 0.512714 1.2:+78369971 None:intergenic
TCGGCGATGGAGCGAGGGAA+AGG 0.512946 1.2:+78369854 None:intergenic
TAAGTAGGAAAGAGTTCAGC+GGG 0.512994 1.2:+78369821 None:intergenic
CACCACTGCTGCACGACGAT+GGG 0.514134 1.2:-78367984 MS.gene93824:CDS
ATATCTAGAAGTACAGGAAT+GGG 0.517316 1.2:+78367584 None:intergenic
CGAGAACCCATTGAGCGCTC+GGG 0.517565 1.2:-78368388 MS.gene93824:CDS
TCAGAGTCCACAACGAGTCC+AGG 0.518023 1.2:+78368577 None:intergenic
GAACGAATATCTAGAAGTAC+AGG 0.518525 1.2:+78367578 None:intergenic
TCTACGTATAACTTCAGGTC+CGG 0.521484 1.2:-78368721 MS.gene93824:CDS
AATATCTAGAAGTACAGGAA+TGG 0.522926 1.2:+78367583 None:intergenic
GGGCCTGCTACTCTTGGACC+TGG 0.524957 1.2:-78368595 MS.gene93824:CDS
CTTTGATTCGTTCTTCCTTG+TGG 0.525311 1.2:-78367531 MS.gene93824:CDS
CGGCGATGGAGCGAGGGAAA+GGG 0.525845 1.2:+78369855 None:intergenic
GAAGATAAACGGAAGGAAGA+AGG 0.526796 1.2:+78367785 None:intergenic
TGTAACAGATGGATTCAACT+TGG 0.530109 1.2:+78367319 None:intergenic
TAGAAGGCCTCCGTTGGTCA+TGG 0.530254 1.2:-78370081 MS.gene93824:CDS
GAAGCTCAGCAACTCCAACT+TGG 0.535939 1.2:+78368410 None:intergenic
AACCCATCGTCGTGCAGCAG+TGG 0.542579 1.2:+78367982 None:intergenic
GACAGTGCCAGATACGTGAT+TGG 0.543112 1.2:+78369897 None:intergenic
ATTGCTCAGTGGAAGAAGCT+TGG 0.543785 1.2:-78367488 MS.gene93824:CDS
AAATGTTGGCTCTAGAATCA+TGG 0.551109 1.2:-78368629 MS.gene93824:CDS
CGGTACAGGCAGGGGAACAT+GGG 0.552230 1.2:-78368022 MS.gene93824:CDS
TATTCAACAGTGGTGTAAGT+AGG 0.553342 1.2:+78369806 None:intergenic
TTCAGTTTATAACACGGTAC+AGG 0.554307 1.2:-78368036 MS.gene93824:CDS
CAGAACAGTTGGTGGCTGAA+CGG 0.558794 1.2:-78367403 MS.gene93824:CDS
AACGAATATTGGAAAAGTGT+AGG 0.560902 1.2:+78367617 None:intergenic
TCAGTGAGTGAGACCGAGGT+TGG 0.560984 1.2:-78368172 MS.gene93824:CDS
TCTTGGACCTGGACTCGTTG+TGG 0.564738 1.2:-78368584 MS.gene93824:CDS
GAACCCATTGAGCGCTCGGG+TGG 0.564852 1.2:-78368385 MS.gene93824:CDS
ACCTAGCCTGACTACTATGC+TGG 0.565891 1.2:+78367351 None:intergenic
TTATAACACGGTACAGGCAG+GGG 0.567860 1.2:-78368030 MS.gene93824:CDS
GGGATCCAACTACTCCTTCG+CGG 0.568133 1.2:+78367654 None:intergenic
TCACCACTGCTGCACGACGA+TGG 0.569982 1.2:-78367985 MS.gene93824:CDS
AGAACTGGATGCAGAACAGT+TGG 0.570733 1.2:-78367414 MS.gene93824:CDS
TTTAAACATGATGATGATGA+GGG 0.572026 1.2:-78368301 MS.gene93824:CDS
AGCAACTCCAACTTGGTCAA+GGG 0.572830 1.2:+78368417 None:intergenic
GGTGTGCACATGATGGTTAG+AGG 0.573658 1.2:+78370019 None:intergenic
AATCTTGCAGTTTCTATAGG+CGG 0.576088 1.2:-78368492 MS.gene93824:CDS
GCCATGAATTCCATGACCAA+CGG 0.578093 1.2:+78370071 None:intergenic
AAAAGCAATGCAAGTTCGGT+CGG 0.578544 1.2:+78368111 None:intergenic
GGGAAGATTAGCGTCGGCGA+TGG 0.578769 1.2:+78369841 None:intergenic
CAGCAGCAATATCTGTGGAA+TGG 0.580313 1.2:+78367954 None:intergenic
CGGCTTATGCTGAACCGCGA+AGG 0.581017 1.2:-78367668 MS.gene93824:CDS
AGCTGAAATTGCAGCTCCAG+TGG 0.583120 1.2:+78368681 None:intergenic
TGAACCATAAATGCAGAGCT+GGG 0.583186 1.2:+78368055 None:intergenic
TAGCGTCGGCGATGGAGCGA+GGG 0.583880 1.2:+78369849 None:intergenic
TTTATAACACGGTACAGGCA+GGG 0.591863 1.2:-78368031 MS.gene93824:CDS
TTAGCGTCGGCGATGGAGCG+AGG 0.595860 1.2:+78369848 None:intergenic
TGAACGGGTTCCAGTGCCAA+AGG 0.596266 1.2:-78367387 MS.gene93824:CDS
AAAATTTGAAGATAAACGGA+AGG 0.596325 1.2:+78367778 None:intergenic
GGGCATGACACGTCTCTGCT+CGG 0.596609 1.2:+78367882 None:intergenic
GCCCATTGAAAATGTCATTG+TGG 0.599300 1.2:+78368533 None:intergenic
ATTGCAGCTCCAGTGGACCT+CGG 0.601250 1.2:+78368688 None:intergenic
CAGTATGCAGCTGGTGTGGA+CGG 0.601268 1.2:+78368833 None:intergenic
GTTTAAACATGATGATGATG+AGG 0.601853 1.2:-78368302 MS.gene93824:CDS
GGTACCACCTTGTCCAACCT+CGG 0.602216 1.2:+78368159 None:intergenic
AAGCCATCTAACAACATCAC+GGG 0.606998 1.2:+78367862 None:intergenic
GATCGTAAGGGAGAAGAGGT+AGG 0.607864 1.2:+78369975 None:intergenic
GGTAATCGAGACGAGCGTAA+GGG 0.611343 1.2:+78369918 None:intergenic
ATTCCACAGATATTGCTGCT+GGG 0.613853 1.2:-78367952 MS.gene93824:CDS
CGGCGCCGCATCGAGTGCAG+AGG 0.614220 1.2:+78369948 None:intergenic
CAAAATTCAACATACACAGA+TGG 0.616886 1.2:-78367296 MS.gene93824:CDS
GACAAGGTGGTACCTGCGTG+TGG 0.618247 1.2:-78368150 MS.gene93824:CDS
ACGAGCGTAAGGGTTTAAAA+CGG 0.624354 1.2:+78369928 None:intergenic
CTTAAGTGGAACATAAATTG+GGG 0.624706 1.2:+78367746 None:intergenic
TCAGTGCCGTGTTGAGAGAG+TGG 0.625706 1.2:+78369998 None:intergenic
ACTGGATGCAGAACAGTTGG+TGG 0.626186 1.2:-78367411 MS.gene93824:CDS
CCGCATCGAGTGCAGAGGAG+AGG 0.628258 1.2:+78369953 None:intergenic
AGTGAGACCGAGGTTGGACA+AGG 0.628463 1.2:-78368166 MS.gene93824:CDS
CGCTTCAGTGAGTGAGACCG+AGG 0.630186 1.2:-78368176 MS.gene93824:CDS
GGGTTACGTTGAGAACAAAA+GGG 0.630742 1.2:+78369875 None:intergenic
TTGCAGATACTGGCAGTGCA+AGG 0.631681 1.2:-78367221 MS.gene93824:CDS
CTTCGCGGTTCAGCATAAGC+CGG 0.634012 1.2:+78367669 None:intergenic
TGCAGCTCCAGTGGACCTCG+GGG 0.636160 1.2:+78368690 None:intergenic
AGGCAGTAGAAGGCCTCCGT+TGG 0.638703 1.2:-78370087 MS.gene93824:CDS
ACAACACTCTAAAAGACCAA+TGG 0.640553 1.2:+78368657 None:intergenic
AGAGAGTGGTGTGCACATGA+TGG 0.640666 1.2:+78370012 None:intergenic
ATTAATCGGAGGTACCTGAT+CGG 0.643714 1.2:+78369547 None:intergenic
CAAGCCATCTAACAACATCA+CGG 0.645432 1.2:+78367861 None:intergenic
GTGTGCACATGATGGTTAGA+GGG 0.648276 1.2:+78370020 None:intergenic
TTCAGCGGGAAGATTAGCGT+CGG 0.651769 1.2:+78369835 None:intergenic
TGCAGAGGAGAGGATCGTAA+GGG 0.656194 1.2:+78369963 None:intergenic
AAACCCAGCAGCAATATCTG+TGG 0.656981 1.2:+78367949 None:intergenic
AGAAGAAGAGTATTCAACAG+TGG 0.657516 1.2:+78369796 None:intergenic
TCTAGAAGTACAGGAATGGG+TGG 0.661190 1.2:+78367587 None:intergenic
ACACAGCCTGTTCCAAAACA+GGG 0.661300 1.2:-78368805 MS.gene93824:CDS
ACCAGCATAGTAGTCAGGCT+AGG 0.662465 1.2:-78367352 MS.gene93824:CDS
TCTATAGGCGGATTGCGAAG+AGG 0.663013 1.2:-78368480 MS.gene93824:CDS
ATGAATTCCATGACCAACGG+AGG 0.664818 1.2:+78370074 None:intergenic
TGTCCAGTATGCAGCTGGTG+TGG 0.665544 1.2:+78368829 None:intergenic
ACCCATAATGGATCACCACA+AGG 0.667206 1.2:+78367516 None:intergenic
TTATGGTTCAGTTTATAACA+CGG 0.670322 1.2:-78368042 MS.gene93824:CDS
CCTCTCCTCTGCACTCGATG+CGG 0.680345 1.2:-78369953 MS.gene93824:CDS
TGTATTCAACTTCCACACGC+AGG 0.686684 1.2:+78368138 None:intergenic
GAGACCGAGGTTGGACAAGG+TGG 0.712733 1.2:-78368163 MS.gene93824:CDS
CAAAGAGCAAGATAGAATCG+GGG 0.712881 1.2:+78367549 None:intergenic
GCAGCTCCAGTGGACCTCGG+GGG 0.714974 1.2:+78368691 None:intergenic
GTAAGTAGGAAAGAGTTCAG+CGG 0.716936 1.2:+78369820 None:intergenic
TGCACACCACTCTCTCAACA+CGG 0.725723 1.2:-78370004 MS.gene93824:CDS
ATGGGTCCAAGATTGCTCAG+TGG 0.775938 1.2:-78367499 MS.gene93824:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTAATTTTACATTAAATTTG+AGG - chr1.2:78368317-78368336 MS.gene93824:CDS 15.0%
!! TACTAATGATGTCAAAATTT+CGG - chr1.2:78369087-78369106 MS.gene93824:intron 20.0%
!! TATGGCTCAAATAAAATAAT+CGG + chr1.2:78368153-78368172 None:intergenic 20.0%
!! TGAATGAAAAGGTAATTAAT+CGG + chr1.2:78367793-78367812 None:intergenic 20.0%
!!! TTTTTTTTGTCTATCAGATA+CGG - chr1.2:78368450-78368469 MS.gene93824:CDS 20.0%
! AAAATTTGAAGATAAACGGA+AGG + chr1.2:78369548-78369567 None:intergenic 25.0%
! ACTAATGATGTCAAAATTTC+GGG - chr1.2:78369088-78369107 MS.gene93824:intron 25.0%
! ATAACAGTGTATGAATGAAA+AGG + chr1.2:78367804-78367823 None:intergenic 25.0%
! ATCAATTTAGGAAATGTCTA+AGG - chr1.2:78368993-78369012 MS.gene93824:intron 25.0%
! ATCGATTACAAAAACAAAAG+CGG + chr1.2:78367575-78367594 None:intergenic 25.0%
! ATTAGTAGTCACTATTTCAA+TGG + chr1.2:78369074-78369093 None:intergenic 25.0%
! GGGAAAAATTTGAAGATAAA+CGG + chr1.2:78369552-78369571 None:intergenic 25.0%
! TAGACATTTCCTAAATTGAT+CGG + chr1.2:78368993-78369012 None:intergenic 25.0%
! TAGCTTATGAAAACAACTTA+TGG + chr1.2:78368171-78368190 None:intergenic 25.0%
! TTATGGTTCAGTTTATAACA+CGG - chr1.2:78369281-78369300 MS.gene93824:intron 25.0%
! TTTGATTACGTTTGATTCAA+TGG - chr1.2:78367681-78367700 MS.gene93824:CDS 25.0%
!! TGTAGGTTGAATCATTATAA+GGG + chr1.2:78369692-78369711 None:intergenic 25.0%
!! TTTAAACATGATGATGATGA+GGG - chr1.2:78369022-78369041 MS.gene93824:intron 25.0%
!! TTTTCCAATATTCGTTTGAT+GGG - chr1.2:78369713-78369732 MS.gene93824:CDS 25.0%
!!! TTCTAAAATTCTCATGGTTT+GGG + chr1.2:78369873-78369892 None:intergenic 25.0%
!!! TTTCTAAAATTCTCATGGTT+TGG + chr1.2:78369874-78369893 None:intergenic 25.0%
AACAAGCTGAAAACAACTTA+TGG - chr1.2:78368209-78368228 MS.gene93824:CDS 30.0%
AGAAAAAAGCAATGCAAGTT+CGG + chr1.2:78369219-78369238 None:intergenic 30.0%
ATCAAAGAGCAAGATAGAAT+CGG + chr1.2:78369779-78369798 None:intergenic 30.0%
ATGAAAAGGTAATTAATCGG+AGG + chr1.2:78367790-78367809 None:intergenic 30.0%
ATTAATGCAAGATGTTCTCT+AGG - chr1.2:78367924-78367943 MS.gene93824:CDS 30.0%
CAAAATTCAACATACACAGA+TGG - chr1.2:78370027-78370046 MS.gene93824:CDS 30.0%
CATTTGAATCCGATCAATTT+AGG - chr1.2:78368981-78369000 MS.gene93824:intron 30.0%
CCTTAAGTGGAACATAAATT+GGG + chr1.2:78369581-78369600 None:intergenic 30.0%
CTAAATCTTGCAGTTTCTAT+AGG - chr1.2:78368828-78368847 MS.gene93824:CDS 30.0%
CTTAAGTGGAACATAAATTG+GGG + chr1.2:78369580-78369599 None:intergenic 30.0%
GAACATAAATTGGGGATAAA+GGG + chr1.2:78369572-78369591 None:intergenic 30.0%
GTAATAATCAATCAGTACTC+TGG - chr1.2:78368015-78368034 MS.gene93824:CDS 30.0%
GTTAGAGACGTCAATAAATT+GGG + chr1.2:78369608-78369627 None:intergenic 30.0%
TCCTTAAGTGGAACATAAAT+TGG + chr1.2:78369582-78369601 None:intergenic 30.0%
TCGATTACAAAAACAAAAGC+GGG + chr1.2:78367574-78367593 None:intergenic 30.0%
TCTAAGCATGAATCTAATCA+AGG + chr1.2:78367884-78367903 None:intergenic 30.0%
TGGTCTGTTTATCATTAACT+TGG + chr1.2:78369243-78369262 None:intergenic 30.0%
TGTTAGAGACGTCAATAAAT+TGG + chr1.2:78369609-78369628 None:intergenic 30.0%
TTCATTCTACGTATAACTTC+AGG - chr1.2:78368597-78368616 MS.gene93824:CDS 30.0%
TTGATCGGATTCAAATGATT+CGG + chr1.2:78368978-78368997 None:intergenic 30.0%
! AACGAATATTGGAAAAGTGT+AGG + chr1.2:78369709-78369728 None:intergenic 30.0%
! AATATCTAGAAGTACAGGAA+TGG + chr1.2:78369743-78369762 None:intergenic 30.0%
! ATATCTAGAAGTACAGGAAT+GGG + chr1.2:78369742-78369761 None:intergenic 30.0%
! CTTTTCCAATATTCGTTTGA+TGG - chr1.2:78369712-78369731 MS.gene93824:CDS 30.0%
! GTGTAGGTTGAATCATTATA+AGG + chr1.2:78369693-78369712 None:intergenic 30.0%
! GTTGAATTTTGTGTAACAGA+TGG + chr1.2:78370018-78370037 None:intergenic 30.0%
! GTTTAAACATGATGATGATG+AGG - chr1.2:78369021-78369040 MS.gene93824:intron 30.0%
!! ACAGCTTTCTAAAATTCTCA+TGG + chr1.2:78369879-78369898 None:intergenic 30.0%
!! CTAAACTCACATTCTGAAAT+TGG + chr1.2:78368554-78368573 None:intergenic 30.0%
!! TGAGAATTTTAGAAAGCTGT+TGG - chr1.2:78369879-78369898 MS.gene93824:CDS 30.0%
!!! GAGTGTTGTTTTGTAAATGT+TGG - chr1.2:78368680-78368699 MS.gene93824:CDS 30.0%
!!! TTTTTTCTAAGAGACATGCA+AGG + chr1.2:78369124-78369143 None:intergenic 30.0%
AATCTTGCAGTTTCTATAGG+CGG - chr1.2:78368831-78368850 MS.gene93824:CDS 35.0%
AGAATCATGGTATTCACTTC+TGG - chr1.2:78368707-78368726 MS.gene93824:CDS 35.0%
ATTACAAAAACAAAAGCGGG+AGG + chr1.2:78367571-78367590 None:intergenic 35.0%
CCCAATTTATGTTCCACTTA+AGG - chr1.2:78369578-78369597 MS.gene93824:CDS 35.0%
CCCATTGAAAATGTCATTGT+GGG + chr1.2:78368792-78368811 None:intergenic 35.0%
CTTCACACTTAGACATTGTT+TGG - chr1.2:78368045-78368064 MS.gene93824:CDS 35.0%
GAAGAAGCTTGGTTATGATA+AGG - chr1.2:78369846-78369865 MS.gene93824:CDS 35.0%
GAATCATGGTATTCACTTCT+GGG - chr1.2:78368708-78368727 MS.gene93824:CDS 35.0%
GGAACATAAATTGGGGATAA+AGG + chr1.2:78369573-78369592 None:intergenic 35.0%
TAAATTGGGATCTCCTTAAG+TGG + chr1.2:78369594-78369613 None:intergenic 35.0%
TATTCAACAGTGGTGTAAGT+AGG + chr1.2:78367520-78367539 None:intergenic 35.0%
TCAAAGAGCAAGATAGAATC+GGG + chr1.2:78369778-78369797 None:intergenic 35.0%
TCTAGATCAATTGCAGATAC+TGG - chr1.2:78370092-78370111 MS.gene93824:CDS 35.0%
TCTCAACTAAGTAACTAAGC+TGG + chr1.2:78368348-78368367 None:intergenic 35.0%
TGGTCACATCTTATAACCTT+TGG + chr1.2:78369955-78369974 None:intergenic 35.0%
TTCAACATACACAGATGGTT+CGG - chr1.2:78370032-78370051 MS.gene93824:CDS 35.0%
TTCAGTTTATAACACGGTAC+AGG - chr1.2:78369287-78369306 MS.gene93824:intron 35.0%
! ACAACACTCTAAAAGACCAA+TGG + chr1.2:78368669-78368688 None:intergenic 35.0%
! ACCCACAATGACATTTTCAA+TGG - chr1.2:78368788-78368807 MS.gene93824:CDS 35.0%
! ATCCGTTTTACCTCTAAGTT+TGG - chr1.2:78369496-78369515 MS.gene93824:intron 35.0%
! CCCACAATGACATTTTCAAT+GGG - chr1.2:78368789-78368808 MS.gene93824:CDS 35.0%
! GAACGAATATCTAGAAGTAC+AGG + chr1.2:78369748-78369767 None:intergenic 35.0%
! TCCGTTTTACCTCTAAGTTT+GGG - chr1.2:78369497-78369516 MS.gene93824:intron 35.0%
! TGGTTCGGATATCATCTTTA+CGG - chr1.2:78370047-78370066 MS.gene93824:CDS 35.0%
! TGTAACAGATGGATTCAACT+TGG + chr1.2:78370007-78370026 None:intergenic 35.0%
!! AAATGTTGGCTCTAGAATCA+TGG - chr1.2:78368694-78368713 MS.gene93824:CDS 35.0%
!! AGAAGAAGAGTATTCAACAG+TGG + chr1.2:78367530-78367549 None:intergenic 35.0%
!! GTTGTTTTCATAAGCTATCC+TGG - chr1.2:78368174-78368193 MS.gene93824:CDS 35.0%
AAAAGCAATGCAAGTTCGGT+CGG + chr1.2:78369215-78369234 None:intergenic 40.0%
AAAGCAACAAGAGCAGTATC+AGG + chr1.2:78367664-78367683 None:intergenic 40.0%
AAGCCATCTAACAACATCAC+GGG + chr1.2:78369464-78369483 None:intergenic 40.0%
AATGTCATTGTGGGTTCTCA+TGG + chr1.2:78368783-78368802 None:intergenic 40.0%
ACGAGCGTAAGGGTTTAAAA+CGG + chr1.2:78367398-78367417 None:intergenic 40.0%
AGGGATTGTTAGGTCTGATT+TGG + chr1.2:78367287-78367306 None:intergenic 40.0%
AGGGTTACGTTGAGAACAAA+AGG + chr1.2:78367452-78367471 None:intergenic 40.0%
ATTCCACAGATATTGCTGCT+GGG - chr1.2:78369371-78369390 MS.gene93824:intron 40.0%
CAAAGAGCAAGATAGAATCG+GGG + chr1.2:78369777-78369796 None:intergenic 40.0%
CAAGCCATCTAACAACATCA+CGG + chr1.2:78369465-78369484 None:intergenic 40.0%
CATCTTATAACCTTTGGCAC+TGG + chr1.2:78369949-78369968 None:intergenic 40.0%
CCCCAAACTTAGAGGTAAAA+CGG + chr1.2:78369501-78369520 None:intergenic 40.0%
CCTAACTAACTACCTGTCTA+AGG + chr1.2:78368269-78368288 None:intergenic 40.0%
CCTTAGACAGGTAGTTAGTT+AGG - chr1.2:78368266-78368285 MS.gene93824:CDS 40.0%
CTGATGAAACTGCGTATTTC+CGG - chr1.2:78369635-78369654 MS.gene93824:CDS 40.0%
GAAGATAAACGGAAGGAAGA+AGG + chr1.2:78369541-78369560 None:intergenic 40.0%
GCCCATTGAAAATGTCATTG+TGG + chr1.2:78368793-78368812 None:intergenic 40.0%
GGGTTACGTTGAGAACAAAA+GGG + chr1.2:78367451-78367470 None:intergenic 40.0%
GTAAGTAGGAAAGAGTTCAG+CGG + chr1.2:78367506-78367525 None:intergenic 40.0%
GTACCTGATCGGAAGAAAAT+TGG + chr1.2:78367768-78367787 None:intergenic 40.0%
TAAGTAGGAAAGAGTTCAGC+GGG + chr1.2:78367505-78367524 None:intergenic 40.0%
TAGACAGGTAGTTAGTTAGG+TGG - chr1.2:78368269-78368288 MS.gene93824:CDS 40.0%
TCCTTGTGGTGATCCATTAT+GGG - chr1.2:78369806-78369825 MS.gene93824:CDS 40.0%
TCGATTACCAATCACGTATC+TGG - chr1.2:78367419-78367438 MS.gene93824:CDS 40.0%
TCTACGTATAACTTCAGGTC+CGG - chr1.2:78368602-78368621 MS.gene93824:CDS 40.0%
TGAACCATAAATGCAGAGCT+GGG + chr1.2:78369271-78369290 None:intergenic 40.0%
TGATGGTTAGAGGGATTGTT+AGG + chr1.2:78367297-78367316 None:intergenic 40.0%
TGTTCCAAAACAGGGATTTC+TGG - chr1.2:78368526-78368545 MS.gene93824:CDS 40.0%
TTCCTTGTGGTGATCCATTA+TGG - chr1.2:78369805-78369824 MS.gene93824:CDS 40.0%
TTTATAACACGGTACAGGCA+GGG - chr1.2:78369292-78369311 MS.gene93824:intron 40.0%
! ACACCAATTTTCTTCCGATC+AGG - chr1.2:78367762-78367781 MS.gene93824:CDS 40.0%
! CAATGACATTTTCAATGGGC+AGG - chr1.2:78368793-78368812 MS.gene93824:CDS 40.0%
! CCGTTTTACCTCTAAGTTTG+GGG - chr1.2:78369498-78369517 MS.gene93824:intron 40.0%
! CTTTGATTCGTTCTTCCTTG+TGG - chr1.2:78369792-78369811 MS.gene93824:CDS 40.0%
! TCGTTGTGGACTCTGATTTT+CGG - chr1.2:78368753-78368772 MS.gene93824:CDS 40.0%
!! AGGTCTGATTTGGTTGTTGA+TGG + chr1.2:78367277-78367296 None:intergenic 40.0%
!! ATTAATCGGAGGTACCTGAT+CGG + chr1.2:78367779-78367798 None:intergenic 40.0%
!!! AGAAATCCCTGTTTTGGAAC+AGG + chr1.2:78368527-78368546 None:intergenic 40.0%
AAACCCAGCAGCAATATCTG+TGG + chr1.2:78369377-78369396 None:intergenic 45.0%
AACACAGCCTGTTCCAAAAC+AGG - chr1.2:78368517-78368536 MS.gene93824:CDS 45.0%
AACTACCTGTCTAAGGACGT+AGG + chr1.2:78368262-78368281 None:intergenic 45.0%
AACTGTTCTGCATCCAGTTC+TGG + chr1.2:78369910-78369929 None:intergenic 45.0%
ACACAGCCTGTTCCAAAACA+GGG - chr1.2:78368518-78368537 MS.gene93824:CDS 45.0%
ACCATGCAAAAGAACGATCC+TGG + chr1.2:78367740-78367759 None:intergenic 45.0%
ACTACCTGTCTAAGGACGTA+GGG + chr1.2:78368261-78368280 None:intergenic 45.0%
AGAACTGGATGCAGAACAGT+TGG - chr1.2:78369909-78369928 MS.gene93824:CDS 45.0%
AGCAACTCCAACTTGGTCAA+GGG + chr1.2:78368909-78368928 None:intergenic 45.0%
ATGAATTCCATGACCAACGG+AGG + chr1.2:78367252-78367271 None:intergenic 45.0%
ATGCCCGTGATGTTGTTAGA+TGG - chr1.2:78369458-78369477 MS.gene93824:intron 45.0%
ATGTGACCAGCATAGTAGTC+AGG - chr1.2:78369966-78369985 MS.gene93824:CDS 45.0%
ATTGCTCAGTGGAAGAAGCT+TGG - chr1.2:78369835-78369854 MS.gene93824:CDS 45.0%
CAAGATAGAATCGGGGCAAA+TGG + chr1.2:78369770-78369789 None:intergenic 45.0%
CACATAGTCCCCAAACTTAG+AGG + chr1.2:78369509-78369528 None:intergenic 45.0%
CAGCAGCAATATCTGTGGAA+TGG + chr1.2:78369372-78369391 None:intergenic 45.0%
CATTCCACAGATATTGCTGC+TGG - chr1.2:78369370-78369389 MS.gene93824:intron 45.0%
CGGAAATACGCAGTTTCATC+AGG + chr1.2:78369637-78369656 None:intergenic 45.0%
CTGAACCATAAATGCAGAGC+TGG + chr1.2:78369272-78369291 None:intergenic 45.0%
CTTCTTCCACTGAGCAATCT+TGG + chr1.2:78369833-78369852 None:intergenic 45.0%
GAGCAATCTTGGACCCATAA+TGG + chr1.2:78369822-78369841 None:intergenic 45.0%
GCCATGAATTCCATGACCAA+CGG + chr1.2:78367255-78367274 None:intergenic 45.0%
GTCAAAATTTCGGGAGCTCT+TGG - chr1.2:78369097-78369116 MS.gene93824:intron 45.0%
GTGGCCCATCAAACGAATAT+TGG + chr1.2:78369720-78369739 None:intergenic 45.0%
GTGTGCACATGATGGTTAGA+GGG + chr1.2:78367306-78367325 None:intergenic 45.0%
GTTGAATTGGAGGCAGTAGA+AGG - chr1.2:78367226-78367245 MS.gene93824:CDS 45.0%
GTTTATAACACGGTACAGGC+AGG - chr1.2:78369291-78369310 MS.gene93824:intron 45.0%
TCCGTTGGTCATGGAATTCA+TGG - chr1.2:78367251-78367270 MS.gene93824:CDS 45.0%
TGATCAAGAAGCAGCAGCTT+CGG - chr1.2:78369396-78369415 MS.gene93824:intron 45.0%
TGTATTCAACTTCCACACGC+AGG + chr1.2:78369188-78369207 None:intergenic 45.0%
TTATAACACGGTACAGGCAG+GGG - chr1.2:78369293-78369312 MS.gene93824:intron 45.0%
! AAGCTATCCTGGAGTGCTTA+CGG - chr1.2:78368185-78368204 MS.gene93824:CDS 45.0%
! GGAACCAGAAATCCCTGTTT+TGG + chr1.2:78368533-78368552 None:intergenic 45.0%
! TCCAGGATCGTTCTTTTGCA+TGG - chr1.2:78367736-78367755 MS.gene93824:CDS 45.0%
! TCTAGAAGTACAGGAATGGG+TGG + chr1.2:78369739-78369758 None:intergenic 45.0%
! TTCAGTTTTCTCACTGCTCC+AGG - chr1.2:78367719-78367738 MS.gene93824:CDS 45.0%
!! ACCCATAATGGATCACCACA+AGG + chr1.2:78369810-78369829 None:intergenic 45.0%
AAATGCAGAGCTGGGCTGAA+TGG + chr1.2:78369263-78369282 None:intergenic 50.0%
ACCAGCATAGTAGTCAGGCT+AGG - chr1.2:78369971-78369990 MS.gene93824:CDS 50.0%
ACCTAGCCTGACTACTATGC+TGG + chr1.2:78369975-78369994 None:intergenic 50.0%
ACTGGATGCAGAACAGTTGG+TGG - chr1.2:78369912-78369931 MS.gene93824:CDS 50.0%
AGAAGCAGCAGCTTCGGTTA+TGG - chr1.2:78369402-78369421 MS.gene93824:intron 50.0%
AGAGAGTGGTGTGCACATGA+TGG + chr1.2:78367314-78367333 None:intergenic 50.0%
AGAGGATCGTAAGGGAGAAG+AGG + chr1.2:78367355-78367374 None:intergenic 50.0%
AGCTGAAATTGCAGCTCCAG+TGG + chr1.2:78368645-78368664 None:intergenic 50.0%
ATGGGTCCAAGATTGCTCAG+TGG - chr1.2:78369824-78369843 MS.gene93824:CDS 50.0%
CAGCAACTCCAACTTGGTCA+AGG + chr1.2:78368910-78368929 None:intergenic 50.0%
CGGAAGGAAGAAGGATCTTC+TGG + chr1.2:78369532-78369551 None:intergenic 50.0%
GAAGCTCAGCAACTCCAACT+TGG + chr1.2:78368916-78368935 None:intergenic 50.0%
GACAGTGCCAGATACGTGAT+TGG + chr1.2:78367429-78367448 None:intergenic 50.0%
GATCGTAAGGGAGAAGAGGT+AGG + chr1.2:78367351-78367370 None:intergenic 50.0%
GCTGCAATTTCAGCTGCCAT+TGG - chr1.2:78368650-78368669 MS.gene93824:CDS 50.0%
GGTAATCGAGACGAGCGTAA+GGG + chr1.2:78367408-78367427 None:intergenic 50.0%
GGTGTGCACATGATGGTTAG+AGG + chr1.2:78367307-78367326 None:intergenic 50.0%
GTGTTTGTCCAGTATGCAGC+TGG + chr1.2:78368502-78368521 None:intergenic 50.0%
TCAGCCCAGCTCTGCATTTA+TGG - chr1.2:78369264-78369283 MS.gene93824:intron 50.0%
TGCACACCACTCTCTCAACA+CGG - chr1.2:78367319-78367338 MS.gene93824:CDS 50.0%
TGCAGAGGAGAGGATCGTAA+GGG + chr1.2:78367363-78367382 None:intergenic 50.0%
TGGTAATCGAGACGAGCGTA+AGG + chr1.2:78367409-78367428 None:intergenic 50.0%
TTCAGCGGGAAGATTAGCGT+CGG + chr1.2:78367491-78367510 None:intergenic 50.0%
TTGCAGATACTGGCAGTGCA+AGG - chr1.2:78370102-78370121 MS.gene93824:CDS 50.0%
!! AGAACAGTTGGTGGCTGAAC+GGG - chr1.2:78369921-78369940 MS.gene93824:CDS 50.0%
!! CAGAACAGTTGGTGGCTGAA+CGG - chr1.2:78369920-78369939 MS.gene93824:CDS 50.0%
!! TCTATAGGCGGATTGCGAAG+AGG - chr1.2:78368843-78368862 MS.gene93824:CDS 50.0%
AAATCCACCCGAGCGCTCAA+TGG + chr1.2:78368945-78368964 None:intergenic 55.0%
AATCCACCCGAGCGCTCAAT+GGG + chr1.2:78368944-78368963 None:intergenic 55.0%
ACACGTCTCTGCTCGGAGAA+TGG + chr1.2:78369437-78369456 None:intergenic 55.0%
ACTTCTGGGCCTGCTACTCT+TGG - chr1.2:78368722-78368741 MS.gene93824:CDS 55.0%
AGTCCAGGTCCAAGAGTAGC+AGG + chr1.2:78368734-78368753 None:intergenic 55.0%
AGTGAGACCGAGGTTGGACA+AGG - chr1.2:78369157-78369176 MS.gene93824:intron 55.0%
ATTGCAGCTCCAGTGGACCT+CGG + chr1.2:78368638-78368657 None:intergenic 55.0%
CAGTATGCAGCTGGTGTGGA+CGG + chr1.2:78368493-78368512 None:intergenic 55.0%
CTCTCCCTACGTCCTTAGAC+AGG - chr1.2:78368254-78368273 MS.gene93824:CDS 55.0%
CTGAACCGCGAAGGAGTAGT+TGG - chr1.2:78369664-78369683 MS.gene93824:CDS 55.0%
CTTCGCGGTTCAGCATAAGC+CGG + chr1.2:78369657-78369676 None:intergenic 55.0%
CTTGTTGCCGTAAGCACTCC+AGG + chr1.2:78368195-78368214 None:intergenic 55.0%
GCTGTTGGAAGCTCCAGAAC+TGG - chr1.2:78369894-78369913 MS.gene93824:CDS 55.0%
GCTTGCTCCCTTGACCAAGT+TGG - chr1.2:78368899-78368918 MS.gene93824:intron 55.0%
GGGATCCAACTACTCCTTCG+CGG + chr1.2:78369672-78369691 None:intergenic 55.0%
GGTACCACCTTGTCCAACCT+CGG + chr1.2:78369167-78369186 None:intergenic 55.0%
GGTGTGGACGGCTAATGTTC+AGG + chr1.2:78368481-78368500 None:intergenic 55.0%
GTGCAGAGGAGAGGATCGTA+AGG + chr1.2:78367364-78367383 None:intergenic 55.0%
TAGAAGGCCTCCGTTGGTCA+TGG - chr1.2:78367242-78367261 MS.gene93824:CDS 55.0%
TCAGAGTCCACAACGAGTCC+AGG + chr1.2:78368749-78368768 None:intergenic 55.0%
TCAGTGAGTGAGACCGAGGT+TGG - chr1.2:78369151-78369170 MS.gene93824:intron 55.0%
TCAGTGCCGTGTTGAGAGAG+TGG + chr1.2:78367328-78367347 None:intergenic 55.0%
TCGAGAACCCATTGAGCGCT+CGG - chr1.2:78368934-78368953 MS.gene93824:intron 55.0%
TCTTGGACCTGGACTCGTTG+TGG - chr1.2:78368739-78368758 MS.gene93824:CDS 55.0%
TGTCCAGTATGCAGCTGGTG+TGG + chr1.2:78368497-78368516 None:intergenic 55.0%
! TGAACGGGTTCCAGTGCCAA+AGG - chr1.2:78369936-78369955 MS.gene93824:CDS 55.0%
AACCCATCGTCGTGCAGCAG+TGG + chr1.2:78369344-78369363 None:intergenic 60.0%
ACGGTACAGGCAGGGGAACA+TGG - chr1.2:78369300-78369319 MS.gene93824:intron 60.0%
AGGCAGTAGAAGGCCTCCGT+TGG - chr1.2:78367236-78367255 MS.gene93824:CDS 60.0%
CACCACTGCTGCACGACGAT+GGG - chr1.2:78369339-78369358 MS.gene93824:intron 60.0%
CCTCTCCTCTGCACTCGATG+CGG - chr1.2:78367370-78367389 MS.gene93824:CDS 60.0%
CGAGAACCCATTGAGCGCTC+GGG - chr1.2:78368935-78368954 MS.gene93824:intron 60.0%
CGCTTCAGTGAGTGAGACCG+AGG - chr1.2:78369147-78369166 MS.gene93824:intron 60.0%
CGGCTTATGCTGAACCGCGA+AGG - chr1.2:78369655-78369674 MS.gene93824:CDS 60.0%
CGGTACAGGCAGGGGAACAT+GGG - chr1.2:78369301-78369320 MS.gene93824:intron 60.0%
CGTCCACACCAGCTGCATAC+TGG - chr1.2:78368491-78368510 MS.gene93824:CDS 60.0%
GACAAGGTGGTACCTGCGTG+TGG - chr1.2:78369173-78369192 MS.gene93824:intron 60.0%
GAGACCGAGGTTGGACAAGG+TGG - chr1.2:78369160-78369179 MS.gene93824:intron 60.0%
GGGCATGACACGTCTCTGCT+CGG + chr1.2:78369444-78369463 None:intergenic 60.0%
TCACCACTGCTGCACGACGA+TGG - chr1.2:78369338-78369357 MS.gene93824:intron 60.0%
TTGCAGCTCCAGTGGACCTC+GGG + chr1.2:78368637-78368656 None:intergenic 60.0%
! TGAGCGCTCGGGTGGATTTG+TGG - chr1.2:78368946-78368965 MS.gene93824:intron 60.0%
!! GGGAAGATTAGCGTCGGCGA+TGG + chr1.2:78367485-78367504 None:intergenic 60.0%
CCGCATCGAGTGCAGAGGAG+AGG + chr1.2:78367373-78367392 None:intergenic 65.0%
CGGCGATGGAGCGAGGGAAA+GGG + chr1.2:78367471-78367490 None:intergenic 65.0%
GAACCCATTGAGCGCTCGGG+TGG - chr1.2:78368938-78368957 MS.gene93824:intron 65.0%
GGGCCTGCTACTCTTGGACC+TGG - chr1.2:78368728-78368747 MS.gene93824:CDS 65.0%
TCGGCGATGGAGCGAGGGAA+AGG + chr1.2:78367472-78367491 None:intergenic 65.0%
TGCAGCTCCAGTGGACCTCG+GGG + chr1.2:78368636-78368655 None:intergenic 65.0%
!! TAGCGTCGGCGATGGAGCGA+GGG + chr1.2:78367477-78367496 None:intergenic 65.0%
!! TTAGCGTCGGCGATGGAGCG+AGG + chr1.2:78367478-78367497 None:intergenic 65.0%
CTCCAGTGGACCTCGGGGGA+CGG + chr1.2:78368631-78368650 None:intergenic 70.0%
GCAGCTCCAGTGGACCTCGG+GGG + chr1.2:78368635-78368654 None:intergenic 70.0%
AGCCGTCCCCCGAGGTCCAC+TGG - chr1.2:78368626-78368645 MS.gene93824:CDS 75.0%
CGGCGCCGCATCGAGTGCAG+AGG + chr1.2:78367378-78367397 None:intergenic 75.0%
GGACCTCGGGGGACGGCTTC+CGG + chr1.2:78368624-78368643 None:intergenic 75.0%
! GGTCCGGAAGCCGTCCCCCG+AGG - chr1.2:78368618-78368637 MS.gene93824:CDS 80.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 78367217 78370128 78367217 ID=MS.gene93824
chr1.2 mRNA 78367217 78370128 78367217 ID=MS.gene93824.t1;Parent=MS.gene93824
chr1.2 exon 78369562 78370128 78369562 ID=MS.gene93824.t1.exon1;Parent=MS.gene93824.t1
chr1.2 CDS 78369562 78370128 78369562 ID=cds.MS.gene93824.t1;Parent=MS.gene93824.t1
chr1.2 exon 78367217 78368878 78367217 ID=MS.gene93824.t1.exon2;Parent=MS.gene93824.t1
chr1.2 CDS 78367217 78368878 78367217 ID=cds.MS.gene93824.t1;Parent=MS.gene93824.t1
Gene Sequence

>MS.gene93824

ATGGATTTCGTTGAATTGGAGGCAGTAGAAGGCCTCCGTTGGTCATGGAATTCATGGCCATCAACAACCAAATCAGACCTAACAATCCCTCTAACCATCATGTGCACACCACTCTCTCAACACGGCACTGACCTACCTCTTCTCCCTTACGATCCTCTCCTCTGCACTCGATGCGGCGCCGTTTTAAACCCTTACGCTCGTCTCGATTACCAATCACGTATCTGGCACTGTCCCTTTTGTTCTCAACGTAACCCTTTCCCTCGCTCCATCGCCGACGCTAATCTTCCCGCTGAACTCTTTCCTACTTACACCACTGTTGAATACTCTTCTTCTTCTTCTTCACTTTTTCATCCTCCCGCTTTTGTTTTTGTAATCGATGTTTCAACTTCTCAAGATGAGCTTTGTTCACTTAAGAATGAGATTTTGCTTCTTCTTCATCATTTGCCTGATACTGCTCTTGTTGCTTTGATTACGTTTGATTCAATGGTTTATCTTCATGATATTCAGTTTTCTCACTGCTCCAGGATCGTTCTTTTGCATGGTGAACACCAATTTTCTTCCGATCAGGTACCTCCGATTAATTACCTTTTCATTCATACACTGTTATATTGTATATGATTGTGATTATCATTATGCTTTCTCGCTAATTCAGTATTAATCAGTACCTTGATTAGATTCATGCTTAGACAGTTAGTTAAGTAAGCTGAATTAATGCAAGATGTTCTCTAGGTTTACATTACAGTTGAGTGCACTGCAGCTTAGTTTTCTTTTTAACTATATTGCTTTCTTTCTAATTTAGTAATAATCAATCAGTACTCTGGTTATTAGCTTCACACTTAGACATTGTTTGGATAAACAACTTCATTAAGCGCTTATCATATTTTTATATGAGCTATAAATAAGCTATTTCTATAACAAAACATAAAATGAAGTCCGATTATTTTATTTGAGCCATAAGTTGTTTTCATAAGCTATCCTGGAGTGCTTACGGCAACAAGCTGAAAACAACTTATGGAGTCATAATCTGTCTCTATAAGCTCTCCCTACGTCCTTAGACAGGTAGTTAGTTAGGTGGTTGCTAAATTAATGCAAGATATTTACTAATTTTACATTAAATTTGAGGACACTCCAGCTTAGTTACTTAGTTGAGAAATTGCTTATTAATGCAATCTGTTGATAGTTTTTACATTATACTTGAGTGCACTACACTGCTTTCTGCTGATTATTTGTTTTTTTTTTTTGTCTATCAGATACGGCAGTTCCTGAACATTAGCCGTCCACACCAGCTGCATACTGGACAAACACAGCCTGTTCCAAAACAGGGATTTCTGGTTCCAATTTCAGAATGTGAGTTTAGTATCACAGCTGCAATTGAAGATATTCATTCTACGTATAACTTCAGGTCCGGAAGCCGTCCCCCGAGGTCCACTGGAGCTGCAATTTCAGCTGCCATTGGTCTTTTAGAGTGTTGTTTTGTAAATGTTGGCTCTAGAATCATGGTATTCACTTCTGGGCCTGCTACTCTTGGACCTGGACTCGTTGTGGACTCTGATTTTCGGCAATCCATGAGAACCCACAATGACATTTTCAATGGGCAGGCGAGACATCATTCTAAATCTTGCAGTTTCTATAGGCGGATTGCGAAGAGGCTGTCTGATGCGTCTGTAGTTCTTGATCTGTTTGCTTGCTCCCTTGACCAAGTTGGAGTTGCTGAGCTTCGAGAACCCATTGAGCGCTCGGGTGGATTTGTGGTTCTTGCCGAATCATTTGAATCCGATCAATTTAGGAAATGTCTAAGGCACTTGTTTAAACATGATGATGATGAGGGATTTTTGAAGATGAATTTTGATGCAACCATTGAAATAGTGACTACTAATGATGTCAAAATTTCGGGAGCTCTTGGACCTTGCATGTCTCTTAGAAAAAAGAACGCTTCAGTGAGTGAGACCGAGGTTGGACAAGGTGGTACCTGCGTGTGGAAGTTGAATACACTCACCGACCGAACTTGCATTGCTTTTTTCTTCCAAGTTAATGATAAACAGACCATTCAGCCCAGCTCTGCATTTATGGTTCAGTTTATAACACGGTACAGGCAGGGGAACATGGGTCTCAGAAAAAGAGTCACCACTGCTGCACGACGATGGGTTGCAAACCATTCCACAGATATTGCTGCTGGGTTTGATCAAGAAGCAGCAGCTTCGGTTATGGCAAGACTTGCCATTCTCCGAGCAGAGACGTGTCATGCCCGTGATGTTGTTAGATGGCTTGATGACACACTTATCCGTTTTACCTCTAAGTTTGGGGACTATGTGCCAGAAGATCCTTCTTCCTTCCGTTTATCTTCAAATTTTTCCCTTTATCCCCAATTTATGTTCCACTTAAGGAGATCCCAATTTATTGACGTCTCTAACACTACTCCTGATGAAACTGCGTATTTCCGGCTTATGCTGAACCGCGAAGGAGTAGTTGGATCCCTTATAATGATTCAACCTACACTTTTCCAATATTCGTTTGATGGGCCACCCATTCCTGTACTTCTAGATATTCGTTCCATTTGCCCCGATTCTATCTTGCTCTTTGATTCGTTCTTCCTTGTGGTGATCCATTATGGGTCCAAGATTGCTCAGTGGAAGAAGCTTGGTTATGATAAGGACCCAAACCATGAGAATTTTAGAAAGCTGTTGGAAGCTCCAGAACTGGATGCAGAACAGTTGGTGGCTGAACGGGTTCCAGTGCCAAAGGTTATAAGATGTGACCAGCATAGTAGTCAGGCTAGGTTTCTTCTTGCCAAGTTGAATCCATCTGTTACACAAAATTCAACATACACAGATGGTTCGGATATCATCTTTACGGATGACTTGAGCTTGCAAGTTTTTCTAGATCAATTGCAGATACTGGCAGTGCAAGGCTGA
Protein sequence

>MS.gene93824.t1

MDFVELEAVEGLRWSWNSWPSTTKSDLTIPLTIMCTPLSQHGTDLPLLPYDPLLCTRCGAVLNPYARLDYQSRIWHCPFCSQRNPFPRSIADANLPAELFPTYTTVEYSSSSSSLFHPPAFVFVIDVSTSQDELCSLKNEILLLLHHLPDTALVALITFDSMVYLHDIQFSHCSRIVLLHGEHQFSSDQIRQFLNISRPHQLHTGQTQPVPKQGFLVPISECEFSITAAIEDIHSTYNFRSGSRPPRSTGAAISAAIGLLECCFVNVGSRIMVFTSGPATLGPGLVVDSDFRQSMRTHNDIFNGQARHHSKSCSFYRRIAKRLSDASVVLDLFACSLDQVGVAELREPIERSGGFVVLAESFESDQFRKCLRHLFKHDDDEGFLKMNFDATIEIVTTNDVKISGALGPCMSLRKKNASVSETEVGQGGTCVWKLNTLTDRTCIAFFFQVNDKQTIQPSSAFMVQFITRYRQGNMGLRKRVTTAARRWVANHSTDIAAGFDQEAAASVMARLAILRAETCHARDVVRWLDDTLIRFTSKFGDYVPEDPSSFRLSSNFSLYPQFMFHLRRSQFIDVSNTTPDETAYFRLMLNREGVVGSLIMIQPTLFQYSFDGPPIPVLLDIRSICPDSILLFDSFFLVVIHYGSKIAQWKKLGYDKDPNHENFRKLLEAPELDAEQLVAERVPVPKVIRCDQHSSQARFLLAKLNPSVTQNSTYTDGSDIIFTDDLSLQVFLDQLQILAVQG