AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94230.t1 MTR_5g082910 91.837 294 16 2 1 292 1 288 0.0 499
MS.gene94230.t1 MTR_4g094982 74.038 104 27 0 16 119 2 105 6.20e-52 171
MS.gene94230.t1 MTR_5g016510 37.209 301 149 6 16 285 2 293 6.06e-51 170
MS.gene94230.t1 MTR_3g101290 71.154 104 30 0 16 119 34 137 8.00e-51 167
MS.gene94230.t1 MTR_4g019370 73.786 103 27 0 17 119 36 138 6.04e-50 169
MS.gene94230.t1 MTR_6g015455 68.269 104 33 0 16 119 2 105 5.80e-44 160
MS.gene94230.t1 MTR_3g089045 49.123 114 58 0 7 120 4 117 1.41e-34 127
MS.gene94230.t1 MTR_6g074860 49.558 113 54 1 19 128 4 116 9.53e-34 123
MS.gene94230.t1 MTR_3g110028 38.462 169 91 3 14 169 80 248 3.61e-33 129
MS.gene94230.t1 MTR_6g027370 40.441 136 77 1 18 149 98 233 6.51e-33 124
MS.gene94230.t1 MTR_5g041570 49.167 120 57 2 4 119 115 234 1.94e-32 124
MS.gene94230.t1 MTR_7g061330 45.312 128 68 1 14 139 72 199 2.46e-32 125
MS.gene94230.t1 MTR_7g061330 46.400 125 65 1 14 136 108 232 2.54e-32 125
MS.gene94230.t1 MTR_7g461410 46.400 125 65 1 14 136 108 232 2.54e-32 125
MS.gene94230.t1 MTR_7g451170 53.846 104 48 0 16 119 188 291 3.79e-32 123
MS.gene94230.t1 MTR_3g077650 52.885 104 49 0 18 121 180 283 4.43e-32 123
MS.gene94230.t1 MTR_1g026870 49.057 106 54 0 14 119 80 185 9.38e-32 124
MS.gene94230.t1 MTR_3g463400 43.548 124 70 0 18 141 132 255 1.27e-31 122
MS.gene94230.t1 MTR_7g037260 50.962 104 51 0 18 121 144 247 2.81e-31 120
MS.gene94230.t1 MTR_7g086960 50.980 102 50 0 19 120 89 190 3.27e-31 119
MS.gene94230.t1 MTR_6g027340 42.982 114 65 0 7 120 4 117 7.29e-31 115
MS.gene94230.t1 MTR_4g082040 49.020 102 52 0 18 119 104 205 1.40e-30 119
MS.gene94230.t1 MTR_4g105660 51.923 104 50 0 18 121 179 282 2.43e-30 118
MS.gene94230.t1 MTR_6g027360 42.982 114 65 0 7 120 66 179 5.17e-30 115
MS.gene94230.t1 MTR_5g010650 47.748 111 58 0 14 124 105 215 1.05e-29 117
MS.gene94230.t1 MTR_4g088015 50.962 104 51 0 18 121 220 323 1.60e-29 116
MS.gene94230.t1 MTR_5g070020 47.115 104 55 0 18 121 121 224 2.91e-29 114
MS.gene94230.t1 MTR_5g042030 42.537 134 74 2 19 151 9 140 3.05e-29 113
MS.gene94230.t1 MTR_5g049190 47.525 101 53 0 18 118 18 118 4.22e-29 111
MS.gene94230.t1 MTR_7g037130 51.000 100 49 0 18 117 144 243 2.43e-28 112
MS.gene94230.t1 MTR_8g042410 41.892 148 73 4 19 164 39 175 5.14e-28 113
MS.gene94230.t1 MTR_8g031360 45.833 120 58 4 19 132 15 133 8.60e-28 109
MS.gene94230.t1 MTR_3g461490 35.758 165 96 4 16 178 10 166 1.54e-27 109
MS.gene94230.t1 MTR_1g062940 46.729 107 54 2 15 119 4 109 2.50e-27 106
MS.gene94230.t1 MTR_1g057980 41.481 135 70 1 19 144 80 214 2.91e-27 107
MS.gene94230.t1 MTR_7g076740 49.550 111 51 4 12 119 8 116 3.17e-27 107
MS.gene94230.t1 MTR_8g095390 45.833 120 59 3 19 133 14 132 3.90e-27 107
MS.gene94230.t1 MTR_7g450950 49.000 100 51 0 18 117 156 255 6.25e-27 107
MS.gene94230.t1 MTR_3g052450 48.544 103 52 1 19 120 42 144 7.12e-27 110
MS.gene94230.t1 MTR_3g011610 44.186 129 67 3 5 129 23 150 1.24e-26 109
MS.gene94230.t1 MTR_4g485530 46.667 105 55 1 16 119 11 115 1.29e-26 103
MS.gene94230.t1 MTR_0008s0280 41.791 134 74 3 12 143 8 139 1.37e-26 104
MS.gene94230.t1 MTR_8g006470 50.943 106 48 3 19 122 12 115 1.75e-26 105
MS.gene94230.t1 MTR_5g079670 48.039 102 52 1 19 119 13 114 2.31e-26 103
MS.gene94230.t1 MTR_3g028740 50.980 102 49 1 19 119 24 125 2.67e-26 106
MS.gene94230.t1 MTR_2g097910 46.429 112 59 1 19 129 22 133 3.74e-26 105
MS.gene94230.t1 MTR_4g063100 43.363 113 61 2 19 129 9 120 3.87e-26 103
MS.gene94230.t1 MTR_7g087130 47.321 112 58 1 19 129 14 125 4.29e-26 105
MS.gene94230.t1 MTR_2g034790 41.860 129 68 3 19 141 14 141 5.65e-26 105
MS.gene94230.t1 MTR_5g029840 47.273 110 54 3 12 119 8 115 5.95e-26 105
MS.gene94230.t1 MTR_4g073420 45.000 120 60 3 19 133 14 132 6.11e-26 103
MS.gene94230.t1 MTR_3g097450 40.845 142 69 5 19 146 14 154 6.13e-26 104
MS.gene94230.t1 MTR_3g052430 47.573 103 53 1 19 120 43 145 6.67e-26 107
MS.gene94230.t1 MTR_2g011660 41.880 117 65 2 19 134 15 129 9.80e-26 104
MS.gene94230.t1 MTR_4g091490 41.803 122 67 3 14 134 11 129 1.84e-25 104
MS.gene94230.t1 MTR_4g065017 50.000 102 50 1 19 119 19 120 2.55e-25 103
MS.gene94230.t1 MTR_3g074520 35.542 166 100 5 12 175 8 168 2.71e-25 103
MS.gene94230.t1 MTR_7g011170 40.650 123 70 2 19 140 14 134 2.74e-25 102
MS.gene94230.t1 MTR_4g029540 45.378 119 63 2 13 129 6 124 2.90e-25 102
MS.gene94230.t1 MTR_5g007370 37.267 161 89 5 12 164 8 164 3.90e-25 102
MS.gene94230.t1 MTR_1g085040 49.515 103 49 2 19 119 14 115 4.61e-25 103
MS.gene94230.t1 MTR_7g035350 48.039 102 53 0 16 117 222 323 4.87e-25 104
MS.gene94230.t1 MTR_1g100653 46.078 102 54 1 19 119 14 115 5.65e-25 101
MS.gene94230.t1 MTR_4g100720 43.689 103 55 2 19 119 15 116 7.62e-25 98.2
MS.gene94230.t1 MTR_4g121460 49.020 102 51 1 19 119 14 115 8.03e-25 102
MS.gene94230.t1 MTR_1g073170 46.602 103 52 2 19 119 22 123 9.36e-25 100
MS.gene94230.t1 MTR_1g045610 45.631 103 53 2 19 119 23 124 1.05e-24 100
MS.gene94230.t1 MTR_0063s0090 47.222 108 53 3 12 117 8 113 1.06e-24 99.4
MS.gene94230.t1 MTR_1g085640 44.915 118 60 3 19 134 14 128 1.08e-24 102
MS.gene94230.t1 MTR_4g082230 46.667 105 53 2 19 121 14 117 1.60e-24 102
MS.gene94230.t1 MTR_2g089620 41.935 124 68 3 12 134 8 128 2.17e-24 100
MS.gene94230.t1 MTR_8g017540 41.353 133 73 4 14 143 54 184 2.62e-24 101
MS.gene94230.t1 MTR_0008s0470 46.602 103 52 2 19 119 15 116 2.69e-24 99.8
MS.gene94230.t1 MTR_8g098860 47.706 109 53 3 14 119 8 115 2.78e-24 100
MS.gene94230.t1 MTR_5g088080 43.478 115 63 2 16 128 11 125 2.94e-24 99.4
MS.gene94230.t1 MTR_5g088150 43.478 115 63 2 16 128 11 125 2.94e-24 99.4
MS.gene94230.t1 MTR_5g488210 43.478 115 63 2 16 128 11 125 2.94e-24 99.4
MS.gene94230.t1 MTR_0008s0390 45.631 103 53 2 19 119 15 116 3.06e-24 99.4
MS.gene94230.t1 MTR_5g088640 43.478 115 63 2 16 128 11 125 3.37e-24 99.4
MS.gene94230.t1 MTR_2g064160 44.660 103 54 2 19 119 13 114 3.38e-24 100
MS.gene94230.t1 MTR_5g088610 43.478 115 63 2 16 128 8 122 3.49e-24 100
MS.gene94230.t1 MTR_8g017440 46.789 109 54 3 14 119 8 115 4.85e-24 100
MS.gene94230.t1 MTR_7g110830 44.167 120 61 3 19 133 14 132 5.20e-24 100
MS.gene94230.t1 MTR_6g009430 39.516 124 69 4 19 140 14 133 5.31e-24 99.8
MS.gene94230.t1 MTR_2g099740 46.789 109 54 3 14 119 8 115 5.80e-24 100
MS.gene94230.t1 MTR_5g488170 43.478 115 63 2 16 128 11 125 5.98e-24 97.8
MS.gene94230.t1 MTR_2g096380 44.660 103 54 2 19 119 8 109 7.20e-24 97.4
MS.gene94230.t1 MTR_4g478180 43.307 127 66 4 12 136 9 131 8.49e-24 99.4
MS.gene94230.t1 MTR_7g117730 45.098 102 55 1 19 119 14 115 9.62e-24 97.4
MS.gene94230.t1 MTR_8g020490 43.925 107 59 1 19 124 10 116 1.16e-23 97.4
MS.gene94230.t1 MTR_5g010020 44.262 122 64 3 14 132 8 128 1.29e-23 99.0
MS.gene94230.t1 MTR_0251s0050 44.660 103 54 2 19 119 15 116 1.52e-23 97.4
MS.gene94230.t1 MTR_1g021230 48.544 103 50 2 19 119 59 160 1.59e-23 99.8
MS.gene94230.t1 MTR_4g102380 41.525 118 64 3 19 134 14 128 1.61e-23 97.4
MS.gene94230.t1 MTR_6g090405 47.273 110 55 3 17 123 11 120 1.70e-23 97.1
MS.gene94230.t1 MTR_5g062790 45.133 113 58 3 16 124 8 120 1.70e-23 97.8
MS.gene94230.t1 MTR_3g103570 46.602 103 53 2 19 119 14 116 1.81e-23 98.6
MS.gene94230.t1 MTR_6g012690 41.463 123 66 3 16 134 8 128 2.31e-23 98.6
MS.gene94230.t1 MTR_4g105130 37.500 160 90 5 19 171 14 170 3.15e-23 98.2
MS.gene94230.t1 MTR_3g077110 41.463 123 67 3 19 139 14 133 3.90e-23 97.8
MS.gene94230.t1 MTR_0140s0030 47.059 102 53 1 19 119 15 116 4.17e-23 97.4
MS.gene94230.t1 MTR_0489s0020 47.059 102 53 1 19 119 15 116 4.17e-23 97.4
MS.gene94230.t1 MTR_2g089420 46.364 110 55 3 12 119 7 114 4.65e-23 98.6
MS.gene94230.t1 MTR_1g112760 41.667 120 65 3 19 136 15 131 5.79e-23 94.7
MS.gene94230.t1 MTR_4g082290 41.880 117 65 2 19 134 14 128 6.14e-23 97.8
MS.gene94230.t1 MTR_8g027345 46.078 102 54 1 19 119 14 115 6.55e-23 96.3
MS.gene94230.t1 MTR_3g039990 47.059 102 53 1 19 119 15 116 1.34e-22 95.5
MS.gene94230.t1 MTR_1g017000 39.552 134 72 5 16 141 10 142 1.98e-22 94.0
MS.gene94230.t1 MTR_1g100667 44.860 107 56 2 19 123 15 120 1.99e-22 94.4
MS.gene94230.t1 MTR_2g088170 47.321 112 58 1 19 129 31 142 2.44e-22 96.7
MS.gene94230.t1 MTR_7g010210 44.545 110 57 3 12 119 8 115 2.71e-22 94.0
MS.gene94230.t1 MTR_2g089450 44.037 109 57 3 12 118 8 114 2.81e-22 93.6
MS.gene94230.t1 MTR_5g014990 44.660 103 55 2 19 119 14 116 3.07e-22 94.4
MS.gene94230.t1 MTR_8g017500 45.872 109 55 3 14 119 8 115 3.09e-22 95.1
MS.gene94230.t1 MTR_7g115650 41.748 103 57 2 19 119 14 115 3.35e-22 92.0
MS.gene94230.t1 MTR_1g043050 44.118 102 56 1 19 119 14 115 3.39e-22 93.2
MS.gene94230.t1 MTR_7g010210 44.545 110 57 3 12 119 8 115 4.12e-22 94.4
MS.gene94230.t1 MTR_5g078140 39.516 124 67 4 16 134 8 128 4.22e-22 94.4
MS.gene94230.t1 MTR_7g035075 42.478 113 62 2 13 123 10 121 4.22e-22 92.0
MS.gene94230.t1 MTR_6g012180 47.115 104 53 2 12 114 8 110 4.82e-22 94.0
MS.gene94230.t1 MTR_3g065440 36.296 135 78 4 16 145 8 139 5.13e-22 94.0
MS.gene94230.t1 MTR_7g111290 50.515 97 45 2 19 113 14 109 5.59e-22 94.7
MS.gene94230.t1 MTR_1g076150 43.689 103 55 2 19 119 14 115 5.67e-22 92.8
MS.gene94230.t1 MTR_8g017340 43.103 116 59 4 19 128 14 128 5.98e-22 95.5
MS.gene94230.t1 MTR_1g043080 44.118 102 56 1 19 119 14 115 7.99e-22 92.4
MS.gene94230.t1 MTR_7g096930 44.660 103 54 2 19 119 14 115 1.17e-21 92.4
MS.gene94230.t1 MTR_1g017140 44.660 103 55 2 19 119 14 116 1.24e-21 93.2
MS.gene94230.t1 MTR_4g128670 48.980 98 48 2 19 114 14 111 1.37e-21 93.2
MS.gene94230.t1 MTR_8g017350 43.103 116 59 4 19 128 14 128 1.71e-21 94.7
MS.gene94230.t1 MTR_8g017390 41.803 122 63 5 14 128 8 128 2.27e-21 94.0
MS.gene94230.t1 MTR_6g055910 42.056 107 59 2 19 123 16 121 2.61e-21 91.7
MS.gene94230.t1 MTR_1g110460 40.777 103 58 2 19 119 28 129 3.53e-21 91.7
MS.gene94230.t1 MTR_3g083540 42.718 103 56 2 19 119 43 144 4.40e-21 91.3
MS.gene94230.t1 MTR_4g097570 45.918 98 50 2 19 113 14 111 6.58e-21 90.5
MS.gene94230.t1 MTR_6g006030 42.157 102 58 1 19 119 16 117 1.08e-20 88.2
MS.gene94230.t1 MTR_4g063100 47.436 78 41 0 52 129 14 91 1.30e-20 88.2
MS.gene94230.t1 MTR_7g102110 34.328 134 86 2 19 150 14 147 1.58e-20 89.4
MS.gene94230.t1 MTR_4g057635 42.453 106 59 2 19 122 14 119 2.09e-20 89.7
MS.gene94230.t1 MTR_2g067420 45.918 98 50 2 19 114 16 112 2.22e-20 89.7
MS.gene94230.t1 MTR_1g083630 46.087 115 60 2 6 119 2 115 2.51e-20 91.3
MS.gene94230.t1 MTR_4g097570 45.361 97 51 2 19 113 14 110 5.79e-20 87.8
MS.gene94230.t1 MTR_0247s0040 41.346 104 52 2 19 117 9 108 6.61e-20 85.5
MS.gene94230.t1 MTR_5g079220 38.532 109 58 2 19 122 23 127 6.80e-20 87.4
MS.gene94230.t1 MTR_4g125520 40.566 106 54 2 19 119 14 115 1.16e-19 87.4
MS.gene94230.t1 MTR_2g095520 45.918 98 51 2 19 114 14 111 2.61e-19 86.7
MS.gene94230.t1 MTR_7g109320 49.020 102 51 1 19 119 14 115 2.92e-19 87.0
MS.gene94230.t1 MTR_5g078910 39.806 103 59 2 19 119 9 110 3.03e-19 86.3
MS.gene94230.t1 MTR_5g079290 36.697 109 60 2 19 122 19 123 3.09e-19 85.5
MS.gene94230.t1 MTR_5g078800 38.679 106 56 2 19 119 9 110 3.20e-19 85.5
MS.gene94230.t1 MTR_8g060940 41.748 103 51 2 19 116 9 107 3.62e-19 84.7
MS.gene94230.t1 MTR_3g045430 34.074 135 84 3 8 140 4 135 5.11e-19 85.5
MS.gene94230.t1 MTR_7g017260 38.889 108 55 2 19 119 27 130 5.98e-19 84.7
MS.gene94230.t1 MTR_5g079120 40.566 106 54 2 19 119 63 164 6.01e-19 85.5
MS.gene94230.t1 MTR_5g078860 39.623 106 55 2 19 119 9 110 6.19e-19 85.5
MS.gene94230.t1 MTR_1g086530 43.750 96 51 2 19 112 35 129 8.27e-19 84.7
MS.gene94230.t1 MTR_1g086510 44.211 95 52 1 19 112 23 117 8.57e-19 84.3
MS.gene94230.t1 MTR_0193s0090 39.048 105 55 2 19 118 9 109 1.64e-18 82.4
MS.gene94230.t1 MTR_0197s0010 38.318 107 63 2 21 125 5 110 2.08e-18 82.4
MS.gene94230.t1 MTR_2g096380 48.529 68 35 0 52 119 23 90 4.31e-18 81.3
MS.gene94230.t1 MTR_0001s0360 38.235 102 62 1 19 119 9 110 4.36e-18 82.0
MS.gene94230.t1 MTR_5g078950 38.462 104 55 2 19 117 9 108 8.07e-18 81.6
MS.gene94230.t1 MTR_5g078930 38.889 108 57 2 17 119 9 112 2.44e-17 79.3
MS.gene94230.t1 MTR_2g033170 39.344 122 69 3 2 119 7 127 2.92e-17 80.9
MS.gene94230.t1 MTR_7g111290 59.677 62 25 0 52 113 6 67 3.20e-17 80.9
MS.gene94230.t1 MTR_6g055910 45.833 72 39 0 52 123 21 92 3.59e-17 79.7
MS.gene94230.t1 MTR_4g128190 41.071 112 53 3 8 118 2 101 7.63e-17 78.6
MS.gene94230.t1 MTR_8g468380 35.000 100 64 1 21 120 24 122 9.20e-17 80.5
MS.gene94230.t1 MTR_5g038910 33.333 105 69 1 21 125 28 131 1.16e-16 79.7
MS.gene94230.t1 MTR_5g038910 33.333 105 69 1 21 125 28 131 2.64e-16 79.0
MS.gene94230.t1 MTR_4g123040 38.889 108 65 1 12 118 19 126 6.66e-16 77.0
MS.gene94230.t1 MTR_1g085880 38.333 120 71 3 12 128 6 125 7.40e-14 69.3
MS.gene94230.t1 MTR_1g085770 38.532 109 65 2 22 128 17 125 1.47e-13 70.1
MS.gene94230.t1 MTR_1g008970 34.375 96 44 1 14 109 105 181 1.56e-13 69.3
MS.gene94230.t1 MTR_7g061550 36.364 99 60 1 17 112 5 103 1.76e-12 67.4
MS.gene94230.t1 MTR_5g007300 42.105 76 41 2 19 92 66 140 1.71e-11 61.2
MS.gene94230.t1 MTR_4g063100 42.857 56 32 0 74 129 1 56 2.86e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94230.t1 AT3G50060 63.866 119 39 1 15 133 2 116 7.62e-49 164
MS.gene94230.t1 AT3G09230 71.154 104 30 0 16 119 52 155 1.16e-47 164
MS.gene94230.t1 AT4G37260 66.964 112 37 0 8 119 2 113 3.08e-47 161
MS.gene94230.t1 AT5G67300 68.571 105 33 0 15 119 2 106 5.01e-47 160
MS.gene94230.t1 AT3G55730 69.903 103 31 0 17 119 54 156 7.46e-47 162
MS.gene94230.t1 AT2G23290 70.192 104 31 0 16 119 10 113 1.20e-46 159
MS.gene94230.t1 AT2G39880 53.020 149 63 3 6 153 39 181 3.33e-44 154
MS.gene94230.t1 AT1G73410 50.893 112 53 1 19 128 6 117 3.59e-35 127
MS.gene94230.t1 AT1G73410 50.893 112 53 1 19 128 6 117 4.06e-35 126
MS.gene94230.t1 AT1G17950 50.495 101 50 0 19 119 5 105 1.03e-33 124
MS.gene94230.t1 AT5G17800 55.446 101 45 0 19 119 93 193 1.50e-33 125
MS.gene94230.t1 AT4G33450 50.000 102 51 0 19 120 19 120 5.81e-33 122
MS.gene94230.t1 AT3G09370 45.588 136 66 2 14 147 130 259 6.34e-33 126
MS.gene94230.t1 AT3G09370 45.522 134 69 1 14 147 138 267 6.36e-33 127
MS.gene94230.t1 AT3G09370 45.588 136 66 2 14 147 125 254 7.09e-33 126
MS.gene94230.t1 AT5G02320 50.000 106 53 0 14 119 62 167 1.14e-32 125
MS.gene94230.t1 AT5G02320 50.000 106 53 0 14 119 122 227 1.49e-32 126
MS.gene94230.t1 AT5G02320 50.000 106 53 0 14 119 122 227 1.49e-32 126
MS.gene94230.t1 AT1G69560 47.321 112 59 0 8 119 96 207 8.55e-32 120
MS.gene94230.t1 AT1G69560 47.321 112 59 0 8 119 112 223 1.00e-31 120
MS.gene94230.t1 AT1G26780 50.495 101 50 0 19 119 98 198 5.72e-31 117
MS.gene94230.t1 AT4G32730 49.057 106 54 0 14 119 82 187 8.80e-31 122
MS.gene94230.t1 AT4G32730 49.057 106 54 0 14 119 82 187 8.80e-31 122
MS.gene94230.t1 AT4G32730 49.057 106 54 0 14 119 82 187 8.80e-31 122
MS.gene94230.t1 AT4G32730 49.057 106 54 0 14 119 82 187 8.80e-31 122
MS.gene94230.t1 AT4G32730 49.057 106 54 0 14 119 82 187 9.52e-31 122
MS.gene94230.t1 AT5G11050 48.077 104 54 0 18 121 104 207 1.11e-30 119
MS.gene94230.t1 AT1G26780 50.495 101 50 0 19 119 98 198 1.42e-30 118
MS.gene94230.t1 AT5G58850 46.154 104 56 0 18 121 104 207 1.43e-30 119
MS.gene94230.t1 AT5G11510 45.283 106 58 0 14 119 76 181 1.65e-30 121
MS.gene94230.t1 AT5G11510 45.283 106 58 0 14 119 76 181 1.65e-30 121
MS.gene94230.t1 AT5G11510 45.283 106 58 0 14 119 76 181 1.65e-30 121
MS.gene94230.t1 AT5G11510 45.283 106 58 0 14 119 76 181 2.37e-30 120
MS.gene94230.t1 AT5G11510 45.283 106 58 0 14 119 76 181 2.44e-30 120
MS.gene94230.t1 AT4G18770 50.980 102 50 0 18 119 216 317 3.19e-30 118
MS.gene94230.t1 AT5G40360 48.077 104 54 0 19 122 158 261 1.46e-29 115
MS.gene94230.t1 AT1G74430 47.107 121 61 2 19 138 14 132 1.70e-29 113
MS.gene94230.t1 AT4G00540 50.909 110 51 1 19 125 103 212 4.90e-29 114
MS.gene94230.t1 AT3G11440 44.186 129 68 2 5 129 26 154 9.00e-29 114
MS.gene94230.t1 AT4G00540 50.909 110 51 1 19 125 101 210 1.05e-28 114
MS.gene94230.t1 AT3G27785 50.000 104 52 0 18 121 188 291 1.82e-28 113
MS.gene94230.t1 AT3G11440 44.186 129 68 2 5 129 26 154 2.34e-28 114
MS.gene94230.t1 AT3G11440 44.186 129 68 2 5 129 26 154 2.34e-28 114
MS.gene94230.t1 AT3G11440 44.186 129 68 2 5 129 26 154 2.34e-28 114
MS.gene94230.t1 AT2G32460 48.649 111 56 1 19 128 20 130 3.35e-28 113
MS.gene94230.t1 AT4G26930 49.107 112 56 1 19 129 21 132 3.48e-28 112
MS.gene94230.t1 AT2G32460 48.649 111 56 1 19 128 8 118 3.83e-28 113
MS.gene94230.t1 AT3G29020 46.535 101 54 0 19 119 65 165 4.25e-28 108
MS.gene94230.t1 AT3G53200 50.000 106 50 2 19 122 11 115 4.39e-28 108
MS.gene94230.t1 AT5G56110 34.356 163 94 5 19 178 14 166 5.35e-28 110
MS.gene94230.t1 AT3G29020 46.535 101 54 0 19 119 67 167 1.01e-27 109
MS.gene94230.t1 AT5G06100 39.855 138 72 2 3 129 8 145 1.21e-27 111
MS.gene94230.t1 AT5G06100 39.855 138 72 2 3 129 8 145 2.28e-27 111
MS.gene94230.t1 AT5G06100 39.855 138 72 2 3 129 8 145 2.28e-27 111
MS.gene94230.t1 AT5G06100 39.855 138 72 2 3 129 8 145 2.28e-27 111
MS.gene94230.t1 AT5G06100 39.855 138 72 2 3 129 8 145 2.28e-27 111
MS.gene94230.t1 AT3G08500 49.107 112 55 2 10 119 22 133 3.06e-27 108
MS.gene94230.t1 AT1G35515 34.857 175 94 4 19 173 14 188 3.79e-27 105
MS.gene94230.t1 AT4G34990 47.009 117 56 3 19 130 14 129 4.07e-27 107
MS.gene94230.t1 AT4G38620 41.722 151 70 5 19 152 14 163 4.35e-27 107
MS.gene94230.t1 AT4G28110 43.548 124 66 3 12 134 8 128 5.13e-27 107
MS.gene94230.t1 AT3G61250 49.515 103 49 2 19 119 14 115 5.13e-27 107
MS.gene94230.t1 AT5G14750 46.087 115 58 3 8 119 6 119 1.12e-26 103
MS.gene94230.t1 AT5G55020 48.214 112 57 1 19 129 28 139 1.28e-26 109
MS.gene94230.t1 AT3G30210 46.729 107 54 2 19 123 29 134 1.98e-26 105
MS.gene94230.t1 AT5G12870 49.020 102 51 1 19 119 20 121 2.30e-26 105
MS.gene94230.t1 AT2G16720 49.515 103 49 2 19 119 14 115 2.38e-26 104
MS.gene94230.t1 AT5G60890 47.573 103 51 2 19 119 14 115 4.06e-26 104
MS.gene94230.t1 AT1G18710 42.017 119 66 2 19 136 14 130 6.11e-26 103
MS.gene94230.t1 AT5G59780 38.065 155 90 3 19 171 10 160 6.46e-26 102
MS.gene94230.t1 AT4G09460 49.515 103 49 2 19 119 14 115 7.96e-26 102
MS.gene94230.t1 AT1G18570 44.348 115 59 3 19 131 15 126 1.05e-25 104
MS.gene94230.t1 AT5G16770 40.000 145 79 5 12 154 8 146 1.10e-25 104
MS.gene94230.t1 AT5G16770 40.000 145 79 5 12 154 8 146 1.10e-25 104
MS.gene94230.t1 AT2G26960 47.009 117 56 3 7 118 7 122 1.33e-25 105
MS.gene94230.t1 AT3G46130 43.697 119 63 3 13 129 6 122 1.67e-25 102
MS.gene94230.t1 AT1G22640 47.573 103 51 2 19 119 14 115 1.75e-25 102
MS.gene94230.t1 AT1G74080 41.739 115 62 3 19 131 14 125 1.88e-25 103
MS.gene94230.t1 AT5G16770 40.000 145 79 5 12 154 8 146 2.81e-25 103
MS.gene94230.t1 AT5G16770 40.000 145 79 5 12 154 8 146 2.81e-25 103
MS.gene94230.t1 AT1G25340 42.478 113 62 2 9 119 10 121 3.85e-25 102
MS.gene94230.t1 AT5G10280 45.946 111 56 3 11 119 7 115 3.93e-25 102
MS.gene94230.t1 AT4G05100 42.276 123 67 3 13 134 10 129 4.01e-25 102
MS.gene94230.t1 AT1G08810 50.000 102 50 1 19 119 14 115 4.12e-25 101
MS.gene94230.t1 AT4G21440 41.935 124 68 3 12 134 8 128 4.24e-25 103
MS.gene94230.t1 AT4G01680 48.544 103 50 2 19 119 14 115 4.30e-25 100
MS.gene94230.t1 AT1G09540 45.000 120 60 3 19 133 14 132 4.37e-25 103
MS.gene94230.t1 AT3G60460 49.057 106 50 3 19 122 13 116 4.56e-25 102
MS.gene94230.t1 AT5G52600 41.353 133 68 4 19 142 14 145 4.99e-25 99.8
MS.gene94230.t1 AT5G07690 43.220 118 62 3 19 134 14 128 5.32e-25 102
MS.gene94230.t1 AT3G48920 45.455 121 57 3 19 131 20 139 6.02e-25 100
MS.gene94230.t1 AT4G13480 46.602 103 52 2 19 119 8 109 6.21e-25 100
MS.gene94230.t1 AT4G17785 38.889 144 77 4 12 147 8 148 6.73e-25 102
MS.gene94230.t1 AT3G27920 37.589 141 81 3 13 147 10 149 6.78e-25 100
MS.gene94230.t1 AT1G57560 44.068 118 61 3 19 134 14 128 9.29e-25 101
MS.gene94230.t1 AT1G57560 44.068 118 61 3 19 134 14 128 9.68e-25 100
MS.gene94230.t1 AT5G61420 41.803 122 66 3 19 138 14 132 9.68e-25 102
MS.gene94230.t1 AT4G12350 38.346 133 76 3 19 146 14 145 1.02e-24 100
MS.gene94230.t1 AT5G26660 40.278 144 78 4 19 155 14 156 1.10e-24 102
MS.gene94230.t1 AT2G25230 39.286 112 68 0 19 130 26 137 1.18e-24 99.4
MS.gene94230.t1 AT4G17785 38.889 144 77 4 12 147 8 148 1.26e-24 102
MS.gene94230.t1 AT5G40330 38.462 143 77 4 19 153 14 153 1.40e-24 99.0
MS.gene94230.t1 AT3G02940 42.400 125 66 4 12 134 8 128 1.41e-24 100
MS.gene94230.t1 AT1G25340 41.441 111 61 1 9 119 10 116 1.41e-24 100
MS.gene94230.t1 AT1G56160 47.706 109 53 3 16 121 12 119 1.53e-24 100
MS.gene94230.t1 AT1G25340 41.441 111 61 1 9 119 10 116 1.79e-24 100
MS.gene94230.t1 AT3G13890 47.222 108 55 2 14 119 8 115 1.92e-24 101
MS.gene94230.t1 AT4G01680 48.544 103 50 2 19 119 14 115 2.09e-24 100
MS.gene94230.t1 AT3G02940 42.400 125 66 4 12 134 8 128 2.39e-24 100
MS.gene94230.t1 AT3G02940 42.400 125 66 4 12 134 8 128 2.39e-24 100
MS.gene94230.t1 AT5G07700 40.984 122 67 3 19 138 14 132 2.88e-24 100
MS.gene94230.t1 AT5G07700 40.984 122 67 3 19 138 14 132 2.88e-24 100
MS.gene94230.t1 AT2G47190 44.444 117 62 2 5 119 8 123 2.95e-24 99.4
MS.gene94230.t1 AT3G28470 47.959 98 48 2 19 114 14 110 5.01e-24 99.8
MS.gene94230.t1 AT1G63910 43.651 126 65 3 14 133 8 133 5.54e-24 100
MS.gene94230.t1 AT3G12720 45.631 103 53 2 19 119 24 125 7.05e-24 99.0
MS.gene94230.t1 AT5G54230 40.164 122 70 2 19 139 14 133 7.90e-24 99.0
MS.gene94230.t1 AT3G24310 45.631 103 53 2 19 119 20 121 1.03e-23 97.8
MS.gene94230.t1 AT5G65230 41.085 129 70 4 8 134 4 128 1.13e-23 98.6
MS.gene94230.t1 AT5G15310 41.880 117 65 2 19 134 14 128 1.20e-23 98.6
MS.gene94230.t1 AT5G15310 41.880 117 65 2 19 134 14 128 1.20e-23 98.6
MS.gene94230.t1 AT3G13890 44.444 117 54 3 14 119 8 124 1.45e-23 99.0
MS.gene94230.t1 AT5G39700 43.434 99 56 0 20 118 57 155 1.46e-23 95.5
MS.gene94230.t1 AT1G06180 46.602 103 52 2 19 119 14 115 1.52e-23 96.7
MS.gene94230.t1 AT1G16490 44.762 105 57 1 19 122 16 120 1.75e-23 97.4
MS.gene94230.t1 AT5G15310 41.880 117 65 2 19 134 14 128 2.03e-23 96.7
MS.gene94230.t1 AT3G01140 46.078 102 54 1 19 119 14 115 2.55e-23 98.2
MS.gene94230.t1 AT5G35550 43.750 112 60 2 19 128 16 126 3.18e-23 96.3
MS.gene94230.t1 AT3G01140 46.078 102 54 1 19 119 57 158 3.52e-23 98.2
MS.gene94230.t1 AT5G62470 44.554 101 56 0 19 119 14 114 3.64e-23 97.8
MS.gene94230.t1 AT3G62610 46.078 102 54 1 19 119 14 115 3.67e-23 97.8
MS.gene94230.t1 AT1G74650 47.059 102 53 1 19 119 14 115 4.30e-23 97.4
MS.gene94230.t1 AT3G13540 45.098 102 55 1 19 119 25 126 5.37e-23 95.5
MS.gene94230.t1 AT3G23250 41.964 112 62 2 19 128 14 124 1.05e-22 95.5
MS.gene94230.t1 AT3G53200 56.338 71 31 0 52 122 12 82 1.34e-22 93.2
MS.gene94230.t1 AT4G01680 43.478 115 50 2 19 119 14 127 1.34e-22 96.3
MS.gene94230.t1 AT3G28910 45.872 109 57 2 12 119 8 115 1.58e-22 95.5
MS.gene94230.t1 AT1G34670 36.691 139 83 4 12 149 8 142 1.69e-22 96.3
MS.gene94230.t1 AT3G12820 45.631 103 53 2 19 119 16 117 1.73e-22 94.0
MS.gene94230.t1 AT5G49330 44.954 109 59 1 19 126 14 122 1.77e-22 95.9
MS.gene94230.t1 AT3G47600 46.078 102 54 1 19 119 14 115 2.28e-22 95.5
MS.gene94230.t1 AT5G62470 46.078 102 54 1 19 119 14 115 2.70e-22 95.5
MS.gene94230.t1 AT4G22680 39.831 118 66 3 19 134 14 128 4.70e-22 93.2
MS.gene94230.t1 AT1G79180 44.660 103 54 2 19 119 16 117 5.25e-22 93.6
MS.gene94230.t1 AT2G31180 43.137 102 57 1 19 119 14 115 6.49e-22 92.4
MS.gene94230.t1 AT1G66230 38.710 124 68 4 16 134 8 128 6.56e-22 93.2
MS.gene94230.t1 AT5G14340 36.170 141 83 4 19 153 26 165 7.16e-22 92.8
MS.gene94230.t1 AT4G37780 44.660 103 55 2 19 119 14 116 2.37e-21 92.0
MS.gene94230.t1 AT3G27810 45.098 102 53 2 19 118 22 122 3.02e-21 90.1
MS.gene94230.t1 AT5G16600 39.516 124 67 4 16 134 8 128 3.71e-21 92.0
MS.gene94230.t1 AT5G65790 44.660 103 55 2 19 119 14 116 3.94e-21 92.4
MS.gene94230.t1 AT2G47460 43.137 102 57 1 19 119 14 115 4.06e-21 92.4
MS.gene94230.t1 AT2G36890 43.363 113 60 3 19 128 14 125 4.33e-21 91.3
MS.gene94230.t1 AT2G36890 43.363 113 60 3 19 128 55 166 5.39e-21 91.7
MS.gene94230.t1 AT5G59780 38.235 136 77 2 36 171 11 139 5.77e-21 89.0
MS.gene94230.t1 AT5G40350 44.118 102 54 2 19 118 19 119 7.93e-21 88.6
MS.gene94230.t1 AT1G68320 40.777 103 58 2 19 119 21 122 1.02e-20 90.1
MS.gene94230.t1 AT4G25560 43.689 103 55 2 19 119 12 113 1.06e-20 89.7
MS.gene94230.t1 AT5G52260 44.660 103 54 2 19 119 14 115 1.08e-20 89.7
MS.gene94230.t1 AT3G01530 41.818 110 61 2 12 119 20 128 1.57e-20 87.8
MS.gene94230.t1 AT3G49690 43.689 103 56 2 19 119 14 116 1.73e-20 89.7
MS.gene94230.t1 AT2G26950 41.667 108 52 3 18 120 17 118 2.22e-20 90.5
MS.gene94230.t1 AT5G14750 52.941 68 32 0 52 119 18 85 3.33e-20 85.9
MS.gene94230.t1 AT5G23000 44.762 105 52 3 19 119 14 116 3.68e-20 89.4
MS.gene94230.t1 AT5G40430 40.385 104 61 1 15 118 50 152 4.15e-20 87.8
MS.gene94230.t1 AT5G57620 43.689 103 56 2 19 119 14 116 4.65e-20 89.0
MS.gene94230.t1 AT5G26660 42.202 109 58 2 52 155 17 125 6.57e-20 88.2
MS.gene94230.t1 AT3G46130 47.436 78 41 0 52 129 23 100 1.11e-19 86.3
MS.gene94230.t1 AT3G46130 47.436 78 41 0 52 129 13 90 1.56e-19 85.5
MS.gene94230.t1 AT1G48000 40.594 101 59 1 19 118 34 134 3.77e-19 84.7
MS.gene94230.t1 AT5G62320 40.541 111 54 3 19 119 15 123 1.85e-18 83.2
MS.gene94230.t1 AT2G02820 35.354 99 64 0 21 119 32 130 2.78e-18 84.0
MS.gene94230.t1 AT5G35550 55.882 68 30 0 52 119 53 120 3.11e-18 82.8
MS.gene94230.t1 AT2G02820 35.354 99 64 0 21 119 32 130 7.27e-18 83.6
MS.gene94230.t1 AT1G79180 34.074 135 55 1 19 119 16 150 7.41e-18 82.8
MS.gene94230.t1 AT3G12820 52.941 68 32 0 52 119 2 69 7.43e-18 80.1
MS.gene94230.t1 AT3G27810 53.731 67 31 0 52 118 7 73 8.19e-18 79.7
MS.gene94230.t1 AT2G02820 35.354 99 64 0 21 119 32 130 8.42e-18 83.6
MS.gene94230.t1 AT3G06490 41.739 115 63 3 7 119 10 122 2.24e-17 81.3
MS.gene94230.t1 AT5G40350 52.239 67 32 0 52 118 8 74 3.41e-17 77.8
MS.gene94230.t1 AT1G14350 33.333 99 66 0 21 119 27 125 7.54e-17 80.5
MS.gene94230.t1 AT1G14350 33.333 99 66 0 21 119 27 125 7.54e-17 80.5
MS.gene94230.t1 AT1G66370 32.609 138 80 4 19 148 10 142 7.69e-17 78.6
MS.gene94230.t1 AT1G66380 34.351 131 76 3 19 143 10 136 8.34e-17 75.9
MS.gene94230.t1 AT3G47600 50.000 68 34 0 52 119 42 109 2.78e-16 78.2
MS.gene94230.t1 AT5G49620 38.532 109 66 1 12 119 21 129 3.50e-16 77.8
MS.gene94230.t1 AT1G56650 32.593 135 76 3 19 142 10 140 9.06e-15 72.8
MS.gene94230.t1 AT3G18100 40.426 94 56 0 19 112 546 639 1.27e-14 74.7
MS.gene94230.t1 AT3G18100 40.426 94 56 0 19 112 498 591 1.40e-14 74.3
MS.gene94230.t1 AT3G18100 40.426 94 56 0 19 112 333 426 1.74e-14 73.9
MS.gene94230.t1 AT3G18100 40.426 94 56 0 19 112 385 478 2.05e-14 73.9
MS.gene94230.t1 AT1G66390 32.847 137 81 3 19 148 10 142 2.06e-14 71.6
MS.gene94230.t1 AT1G71030 46.154 65 35 0 55 119 5 69 3.32e-13 67.0
MS.gene94230.t1 AT1G71030 46.154 65 35 0 55 119 19 83 4.18e-13 67.0
MS.gene94230.t1 AT5G49620 34.146 123 66 2 12 119 21 143 8.80e-13 68.2
MS.gene94230.t1 AT1G22640 50.877 57 28 0 63 119 2 58 9.17e-13 66.2
MS.gene94230.t1 AT1G66380 37.634 93 57 1 52 143 11 103 9.41e-13 63.9
MS.gene94230.t1 AT5G14750 47.368 57 30 0 63 119 2 58 1.19e-12 64.7
MS.gene94230.t1 AT5G14750 47.368 57 30 0 63 119 2 58 1.19e-12 64.7
MS.gene94230.t1 AT2G37630 35.354 99 61 1 17 112 2 100 8.91e-12 65.5
MS.gene94230.t1 AT5G59780 35.714 98 60 1 74 171 1 95 1.51e-11 62.4
MS.gene94230.t1 AT1G18960 33.654 104 65 3 17 119 8 108 3.40e-11 63.2
MS.gene94230.t1 AT3G46130 44.643 56 31 0 74 129 1 56 6.16e-11 60.8
MS.gene94230.t1 AT3G23250 41.791 67 39 0 62 128 1 67 8.83e-11 61.2

Find 81 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACGACGGTGATTATTATA+AGG 0.303478 5.4:+65663864 MS.gene94230:CDS
CACTTTCGAAGTGTTGAATC+AGG 0.309175 5.4:-65664231 None:intergenic
TTATCCTCCGCCGGTGTAAA+AGG 0.319601 5.4:-65663592 None:intergenic
AACGGAATCCCCGGTCGTTC+TGG 0.325808 5.4:+65663514 MS.gene94230:CDS
ATTGAAGCACATGCACTTCA+TGG 0.343331 5.4:+65663622 MS.gene94230:CDS
TTCATCACCACCATTTGAAT+TGG 0.344690 5.4:-65663392 None:intergenic
TTATAAACGTCCTTGTGTTA+TGG 0.349334 5.4:+65663909 MS.gene94230:CDS
ACGATTTCTCGTCTTCTTCC+AGG 0.363590 5.4:+65663658 MS.gene94230:CDS
GCATGATAGCAGAGGAAGTT+AGG 0.373360 5.4:+65664169 MS.gene94230:CDS
GATGATGACGCAGGGAATAA+AGG 0.383743 5.4:+65663988 MS.gene94230:CDS
AGGAAAACGGTGCAAGAAAC+TGG 0.405900 5.4:+65663479 MS.gene94230:CDS
GTGATAAAGTGAAGGGTTCA+TGG 0.407783 5.4:+65663419 MS.gene94230:CDS
ATGCACTTCATGGAAACAAA+TGG 0.413811 5.4:+65663632 MS.gene94230:CDS
ACCGGTGGAACCGTTGTAAT+CGG 0.414115 5.4:-65663760 None:intergenic
ATTACCACCGGTGTGATAAC+CGG 0.414354 5.4:+65663823 MS.gene94230:CDS
CTTTGAACAACCGTTGTAAC+CGG 0.418464 5.4:-65663778 None:intergenic
AGATGAAACATTGGTGAAAC+TGG 0.427247 5.4:+65663453 MS.gene94230:CDS
ACGGAATCCCCGGTCGTTCT+GGG 0.435316 5.4:+65663515 MS.gene94230:CDS
AACTCTCCGCCGTCGTCGCA+CGG 0.450623 5.4:+65663717 MS.gene94230:CDS
GATAACATGCGCCTTGGTGG+TGG 0.451447 5.4:+65664201 MS.gene94230:CDS
CGGTTACAACGGTTGTTCAA+AGG 0.461461 5.4:+65663779 MS.gene94230:CDS
ACCGATTACAACGGTTCCAC+CGG 0.464009 5.4:+65663759 MS.gene94230:CDS
GGTTACAACGGTTGTTCAAA+GGG 0.475302 5.4:+65663780 MS.gene94230:CDS
CAGGAGCCGCCGTGCGACGA+CGG 0.475702 5.4:-65663726 None:intergenic
AGTGAAAATTCCAATTCAAA+TGG 0.476613 5.4:+65663382 MS.gene94230:CDS
GCAAGACTTCCCAGAACGAC+CGG 0.501357 5.4:-65663524 None:intergenic
TGCACTTCATGGAAACAAAT+GGG 0.501694 5.4:+65663633 MS.gene94230:CDS
GTCACGTGACGGTGAAGAAA+CGG 0.504415 5.4:+65663957 MS.gene94230:CDS
AACGGTTCCACCGGTTACAA+CGG 0.509472 5.4:+65663768 MS.gene94230:CDS
ATAAAGGTGTTAACGTGGTT+AGG 0.512437 5.4:+65664004 MS.gene94230:CDS
TATAAGGATTTGTTGAGTCT+CGG 0.514924 5.4:+65663880 MS.gene94230:CDS
GTAATCGGTGGAACCGCTGC+AGG 0.520216 5.4:-65663745 None:intergenic
GTGAAACTGGTAAAGGAAAA+CGG 0.530100 5.4:+65663466 MS.gene94230:CDS
TCTTCTTCTTTCAGAAAACC+AGG 0.531221 5.4:-65664048 None:intergenic
TCGCACGGCGGCTCCTGCAG+CGG 0.536093 5.4:+65663732 MS.gene94230:CDS
GTTGATAACATGCGCCTTGG+TGG 0.538563 5.4:+65664198 MS.gene94230:CDS
CAAGACTTCCCAGAACGACC+GGG 0.539420 5.4:-65663523 None:intergenic
GGAAGTCTTGCCGTCTGCGG+TGG 0.545828 5.4:+65663536 MS.gene94230:CDS
TCGTTAAGTTTGTTTCCACC+TGG 0.549818 5.4:+65664030 MS.gene94230:CDS
GTGATAAGCAACGGAATCCC+CGG 0.556212 5.4:+65663505 MS.gene94230:CDS
AACATTGGTGAAACTGGTAA+AGG 0.560058 5.4:+65663459 MS.gene94230:CDS
AAAGGAAGGTGTTGAACGGT+TGG 0.567448 5.4:-65663574 None:intergenic
ATCGCGTTATCTGTTCTACC+TGG 0.573592 5.4:-65663676 None:intergenic
GTAATCATCGGCACCGCCGT+TGG 0.573649 5.4:-65663805 None:intergenic
CTGGGAAGTCTTGCCGTCTG+CGG 0.576361 5.4:+65663533 MS.gene94230:CDS
TCAAATGGTGGTGATGAAAA+CGG 0.577186 5.4:+65663397 MS.gene94230:CDS
TAAAACTGAAGATGAAACAT+TGG 0.578358 5.4:+65663444 MS.gene94230:CDS
GAGAATAATAGCGGGTCACG+TGG 0.581994 5.4:+65663934 MS.gene94230:CDS
ATCACACCGGTGGTAATCAT+CGG 0.583268 5.4:-65663817 None:intergenic
GAAAATTCCAATTCAAATGG+TGG 0.587306 5.4:+65663385 MS.gene94230:CDS
ATAACATGCGCCTTGGTGGT+GGG 0.589296 5.4:+65664202 MS.gene94230:CDS
CCTCCGCCGGTGTAAAAGGA+AGG 0.589718 5.4:-65663588 None:intergenic
AACTGGTCTGTGATAAGCAA+CGG 0.591578 5.4:+65663496 MS.gene94230:CDS
TGAACAACCGTTGTAACCGG+TGG 0.593669 5.4:-65663775 None:intergenic
TGTTCAAAGGGTTCCAACGG+CGG 0.597209 5.4:+65663792 MS.gene94230:CDS
TATGTTGATAACATGCGCCT+TGG 0.597244 5.4:+65664195 MS.gene94230:CDS
ATGATGATGTTATCCTCCGC+CGG 0.600301 5.4:-65663601 None:intergenic
TGAAAACGGTGATAAAGTGA+AGG 0.601532 5.4:+65663411 MS.gene94230:CDS
GAGCCGCCGTGCGACGACGG+CGG 0.605959 5.4:-65663723 None:intergenic
GCTGATTACACCACCGCAGA+CGG 0.606009 5.4:-65663546 None:intergenic
GGTTGTTCAAAGGGTTCCAA+CGG 0.607530 5.4:+65663789 MS.gene94230:CDS
GAAAACGGTGATAAAGTGAA+GGG 0.623051 5.4:+65663412 MS.gene94230:CDS
GTTATGGTTGAGAATAATAG+CGG 0.638175 5.4:+65663925 MS.gene94230:CDS
TCTTCTTTCAGAAAACCAGG+TGG 0.639884 5.4:-65664045 None:intergenic
TTATGGTTGAGAATAATAGC+GGG 0.641955 5.4:+65663926 MS.gene94230:CDS
GGTGGAACCGTTGTAATCGG+TGG 0.642730 5.4:-65663757 None:intergenic
GCGGTGCCGATGATTACCAC+CGG 0.644749 5.4:+65663811 MS.gene94230:CDS
GGGTCACGTGGGTCACGTGA+CGG 0.646108 5.4:+65663946 MS.gene94230:CDS
TGTAAAAGGAAGGTGTTGAA+CGG 0.650810 5.4:-65663578 None:intergenic
AGAATAATAGCGGGTCACGT+GGG 0.660707 5.4:+65663935 MS.gene94230:CDS
AGCGGTTCCACCGATTACAA+CGG 0.663232 5.4:+65663750 MS.gene94230:CDS
GTAACGGAAGATGATGACGC+AGG 0.670273 5.4:+65663979 MS.gene94230:CDS
TAACGGAAGATGATGACGCA+GGG 0.671779 5.4:+65663980 MS.gene94230:CDS
TTATTCTCAACCATAACACA+AGG 0.679685 5.4:-65663919 None:intergenic
AAGACTTCCCAGAACGACCG+GGG 0.681485 5.4:-65663522 None:intergenic
TCTTCAGCGCATGATAGCAG+AGG 0.681841 5.4:+65664161 MS.gene94230:CDS
TGACGGTGAAGAAACGGTAA+CGG 0.688161 5.4:+65663963 MS.gene94230:CDS
CAGGAGCTAACCCACCACCA+AGG 0.713499 5.4:-65664212 None:intergenic
CGTGTGAATGAAAGTTACGA+CGG 0.718108 5.4:+65663850 MS.gene94230:CDS
AGGGAATAAAGGTGTTAACG+TGG 0.740809 5.4:+65663999 MS.gene94230:CDS
TCTCCGCCGTCGTCGCACGG+CGG 0.756035 5.4:+65663720 MS.gene94230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGTGAAAATTCCAATTCAAA+TGG + chr5.4:65663382-65663401 MS.gene94230:CDS 25.0%
! TAAAACTGAAGATGAAACAT+TGG + chr5.4:65663444-65663463 MS.gene94230:CDS 25.0%
! TACTGAAAAATGAGAAATTG+AGG + chr5.4:65664133-65664152 MS.gene94230:CDS 25.0%
ATAACGCGATAAAAAATCAC+TGG + chr5.4:65663689-65663708 MS.gene94230:CDS 30.0%
GAAAAATGAGAAATTGAGGT+CGG + chr5.4:65664137-65664156 MS.gene94230:CDS 30.0%
GAAAATTCCAATTCAAATGG+TGG + chr5.4:65663385-65663404 MS.gene94230:CDS 30.0%
GTTATGGTTGAGAATAATAG+CGG + chr5.4:65663925-65663944 MS.gene94230:CDS 30.0%
TTACGACGGTGATTATTATA+AGG + chr5.4:65663864-65663883 MS.gene94230:CDS 30.0%
TTATAAACGTCCTTGTGTTA+TGG + chr5.4:65663909-65663928 MS.gene94230:CDS 30.0%
TTATGGTTGAGAATAATAGC+GGG + chr5.4:65663926-65663945 MS.gene94230:CDS 30.0%
TTATTCTCAACCATAACACA+AGG - chr5.4:65663922-65663941 None:intergenic 30.0%
!! TATAAGGATTTGTTGAGTCT+CGG + chr5.4:65663880-65663899 MS.gene94230:CDS 30.0%
AACATTGGTGAAACTGGTAA+AGG + chr5.4:65663459-65663478 MS.gene94230:CDS 35.0%
AGATGAAACATTGGTGAAAC+TGG + chr5.4:65663453-65663472 MS.gene94230:CDS 35.0%
ATGCACTTCATGGAAACAAA+TGG + chr5.4:65663632-65663651 MS.gene94230:CDS 35.0%
GAAAACGGTGATAAAGTGAA+GGG + chr5.4:65663412-65663431 MS.gene94230:CDS 35.0%
GTGAAACTGGTAAAGGAAAA+CGG + chr5.4:65663466-65663485 MS.gene94230:CDS 35.0%
TCTTCTTCTTTCAGAAAACC+AGG - chr5.4:65664051-65664070 None:intergenic 35.0%
TGAAAACGGTGATAAAGTGA+AGG + chr5.4:65663411-65663430 MS.gene94230:CDS 35.0%
TGCACTTCATGGAAACAAAT+GGG + chr5.4:65663633-65663652 MS.gene94230:CDS 35.0%
TTCATCACCACCATTTGAAT+TGG - chr5.4:65663395-65663414 None:intergenic 35.0%
! ACTTTCATTCACACGTTTTC+CGG - chr5.4:65663845-65663864 None:intergenic 35.0%
! TCAAATGGTGGTGATGAAAA+CGG + chr5.4:65663397-65663416 MS.gene94230:CDS 35.0%
!! ATAAAGGTGTTAACGTGGTT+AGG + chr5.4:65664004-65664023 MS.gene94230:CDS 35.0%
!! TGTAAAAGGAAGGTGTTGAA+CGG - chr5.4:65663581-65663600 None:intergenic 35.0%
ATTGAAGCACATGCACTTCA+TGG + chr5.4:65663622-65663641 MS.gene94230:CDS 40.0%
CGTGTGAATGAAAGTTACGA+CGG + chr5.4:65663850-65663869 MS.gene94230:CDS 40.0%
CTTTGAACAACCGTTGTAAC+CGG - chr5.4:65663781-65663800 None:intergenic 40.0%
GGTTACAACGGTTGTTCAAA+GGG + chr5.4:65663780-65663799 MS.gene94230:CDS 40.0%
GTGATAAAGTGAAGGGTTCA+TGG + chr5.4:65663419-65663438 MS.gene94230:CDS 40.0%
TCTTCTTTCAGAAAACCAGG+TGG - chr5.4:65664048-65664067 None:intergenic 40.0%
! AACTGGTCTGTGATAAGCAA+CGG + chr5.4:65663496-65663515 MS.gene94230:CDS 40.0%
! TCAACACCTTCCTTTTACAC+CGG + chr5.4:65663582-65663601 MS.gene94230:CDS 40.0%
! TCGTTAAGTTTGTTTCCACC+TGG + chr5.4:65664030-65664049 MS.gene94230:CDS 40.0%
!! AGGGAATAAAGGTGTTAACG+TGG + chr5.4:65663999-65664018 MS.gene94230:CDS 40.0%
!! CACTTTCGAAGTGTTGAATC+AGG - chr5.4:65664234-65664253 None:intergenic 40.0%
!! TATGTTGATAACATGCGCCT+TGG + chr5.4:65664195-65664214 MS.gene94230:CDS 40.0%
ACGATTTCTCGTCTTCTTCC+AGG + chr5.4:65663658-65663677 MS.gene94230:CDS 45.0%
AGGAAAACGGTGCAAGAAAC+TGG + chr5.4:65663479-65663498 MS.gene94230:CDS 45.0%
ATCACACCGGTGGTAATCAT+CGG - chr5.4:65663820-65663839 None:intergenic 45.0%
ATCGCGTTATCTGTTCTACC+TGG - chr5.4:65663679-65663698 None:intergenic 45.0%
ATTACCACCGGTGTGATAAC+CGG + chr5.4:65663823-65663842 MS.gene94230:CDS 45.0%
CGGTTACAACGGTTGTTCAA+AGG + chr5.4:65663779-65663798 MS.gene94230:CDS 45.0%
GCATGATAGCAGAGGAAGTT+AGG + chr5.4:65664169-65664188 MS.gene94230:CDS 45.0%
GGTTGTTCAAAGGGTTCCAA+CGG + chr5.4:65663789-65663808 MS.gene94230:CDS 45.0%
TGACGGTGAAGAAACGGTAA+CGG + chr5.4:65663963-65663982 MS.gene94230:CDS 45.0%
! ACGTTTTCCGGTTATCACAC+CGG - chr5.4:65663833-65663852 None:intergenic 45.0%
! ATGATGATGTTATCCTCCGC+CGG - chr5.4:65663604-65663623 None:intergenic 45.0%
! GATGATGACGCAGGGAATAA+AGG + chr5.4:65663988-65664007 MS.gene94230:CDS 45.0%
! TAACGGAAGATGATGACGCA+GGG + chr5.4:65663980-65663999 MS.gene94230:CDS 45.0%
!! AAAGGAAGGTGTTGAACGGT+TGG - chr5.4:65663577-65663596 None:intergenic 45.0%
!! AGAATAATAGCGGGTCACGT+GGG + chr5.4:65663935-65663954 MS.gene94230:CDS 45.0%
ACCGATTACAACGGTTCCAC+CGG + chr5.4:65663759-65663778 MS.gene94230:CDS 50.0%
ACCGGTGGAACCGTTGTAAT+CGG - chr5.4:65663763-65663782 None:intergenic 50.0%
GTCACGTGACGGTGAAGAAA+CGG + chr5.4:65663957-65663976 MS.gene94230:CDS 50.0%
GTGATAAGCAACGGAATCCC+CGG + chr5.4:65663505-65663524 MS.gene94230:CDS 50.0%
TCTTCAGCGCATGATAGCAG+AGG + chr5.4:65664161-65664180 MS.gene94230:CDS 50.0%
TGAACAACCGTTGTAACCGG+TGG - chr5.4:65663778-65663797 None:intergenic 50.0%
TGTTCAAAGGGTTCCAACGG+CGG + chr5.4:65663792-65663811 MS.gene94230:CDS 50.0%
TTATCCTCCGCCGGTGTAAA+AGG - chr5.4:65663595-65663614 None:intergenic 50.0%
! AACGGTTCCACCGGTTACAA+CGG + chr5.4:65663768-65663787 MS.gene94230:CDS 50.0%
! ACACCTTCCTTTTACACCGG+CGG + chr5.4:65663585-65663604 MS.gene94230:CDS 50.0%
! AGCGGTTCCACCGATTACAA+CGG + chr5.4:65663750-65663769 MS.gene94230:CDS 50.0%
! ATAACATGCGCCTTGGTGGT+GGG + chr5.4:65664202-65664221 MS.gene94230:CDS 50.0%
! GTAACGGAAGATGATGACGC+AGG + chr5.4:65663979-65663998 MS.gene94230:CDS 50.0%
! TTTTCCGGTTATCACACCGG+TGG - chr5.4:65663830-65663849 None:intergenic 50.0%
!! GAGAATAATAGCGGGTCACG+TGG + chr5.4:65663934-65663953 MS.gene94230:CDS 50.0%
!! GTTGATAACATGCGCCTTGG+TGG + chr5.4:65664198-65664217 MS.gene94230:CDS 50.0%
AAGACTTCCCAGAACGACCG+GGG - chr5.4:65663525-65663544 None:intergenic 55.0%
CAAGACTTCCCAGAACGACC+GGG - chr5.4:65663526-65663545 None:intergenic 55.0%
GATAACATGCGCCTTGGTGG+TGG + chr5.4:65664201-65664220 MS.gene94230:CDS 55.0%
GCAAGACTTCCCAGAACGAC+CGG - chr5.4:65663527-65663546 None:intergenic 55.0%
GCTGATTACACCACCGCAGA+CGG - chr5.4:65663549-65663568 None:intergenic 55.0%
GGTGGAACCGTTGTAATCGG+TGG - chr5.4:65663760-65663779 None:intergenic 55.0%
AACGGAATCCCCGGTCGTTC+TGG + chr5.4:65663514-65663533 MS.gene94230:CDS 60.0%
ACGGAATCCCCGGTCGTTCT+GGG + chr5.4:65663515-65663534 MS.gene94230:CDS 60.0%
CAGGAGCTAACCCACCACCA+AGG - chr5.4:65664215-65664234 None:intergenic 60.0%
CCTCCGCCGGTGTAAAAGGA+AGG - chr5.4:65663591-65663610 None:intergenic 60.0%
CTGGGAAGTCTTGCCGTCTG+CGG + chr5.4:65663533-65663552 MS.gene94230:CDS 60.0%
GTAATCATCGGCACCGCCGT+TGG - chr5.4:65663808-65663827 None:intergenic 60.0%
GTAATCGGTGGAACCGCTGC+AGG - chr5.4:65663748-65663767 None:intergenic 60.0%
! CCTTCCTTTTACACCGGCGG+AGG + chr5.4:65663588-65663607 MS.gene94230:CDS 60.0%
!! GCGGTGCCGATGATTACCAC+CGG + chr5.4:65663811-65663830 MS.gene94230:CDS 60.0%
AACTCTCCGCCGTCGTCGCA+CGG + chr5.4:65663717-65663736 MS.gene94230:CDS 65.0%
GGAAGTCTTGCCGTCTGCGG+TGG + chr5.4:65663536-65663555 MS.gene94230:CDS 65.0%
GGGTCACGTGGGTCACGTGA+CGG + chr5.4:65663946-65663965 MS.gene94230:CDS 65.0%
CAGGAGCCGCCGTGCGACGA+CGG - chr5.4:65663729-65663748 None:intergenic 75.0%
TCGCACGGCGGCTCCTGCAG+CGG + chr5.4:65663732-65663751 MS.gene94230:CDS 75.0%
TCTCCGCCGTCGTCGCACGG+CGG + chr5.4:65663720-65663739 MS.gene94230:CDS 75.0%
! GAGCCGCCGTGCGACGACGG+CGG - chr5.4:65663726-65663745 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 65663376 65664254 65663376 ID=MS.gene94230
chr5.4 mRNA 65663376 65664254 65663376 ID=MS.gene94230.t1;Parent=MS.gene94230
chr5.4 exon 65663376 65664254 65663376 ID=MS.gene94230.t1.exon1;Parent=MS.gene94230.t1
chr5.4 CDS 65663376 65664254 65663376 ID=cds.MS.gene94230.t1;Parent=MS.gene94230.t1
Gene Sequence

>MS.gene94230

ATGATCAGTGAAAATTCCAATTCAAATGGTGGTGATGAAAACGGTGATAAAGTGAAGGGTTCATGGAGTAAAACTGAAGATGAAACATTGGTGAAACTGGTAAAGGAAAACGGTGCAAGAAACTGGTCTGTGATAAGCAACGGAATCCCCGGTCGTTCTGGGAAGTCTTGCCGTCTGCGGTGGTGTAATCAGCTGAGTCCAACCGTTCAACACCTTCCTTTTACACCGGCGGAGGATAACATCATCATTGAAGCACATGCACTTCATGGAAACAAATGGGCGACGATTTCTCGTCTTCTTCCAGGTAGAACAGATAACGCGATAAAAAATCACTGGAATTCAACTCTCCGCCGTCGTCGCACGGCGGCTCCTGCAGCGGTTCCACCGATTACAACGGTTCCACCGGTTACAACGGTTGTTCAAAGGGTTCCAACGGCGGTGCCGATGATTACCACCGGTGTGATAACCGGAAAACGTGTGAATGAAAGTTACGACGGTGATTATTATAAGGATTTGTTGAGTCTCGGTACACGTTATAAACGTCCTTGTGTTATGGTTGAGAATAATAGCGGGTCACGTGGGTCACGTGACGGTGAAGAAACGGTAACGGAAGATGATGACGCAGGGAATAAAGGTGTTAACGTGGTTAGGACGTCGTTAAGTTTGTTTCCACCTGGTTTTCTGAAAGAAGAAGAAGAGAGAAAAGAAAAAGAAAAAGAAATTGAAGATTTTGAAGATAGTAATGATGATTTGAAGTTACTGAAAAATGAGAAATTGAGGTCGGTTCTTCAGCGCATGATAGCAGAGGAAGTTAGGAATTATGTTGATAACATGCGCCTTGGTGGTGGGTTAGCTCCTGATTCAACACTTCGAAAGTGA
Protein sequence

>MS.gene94230.t1

MISENSNSNGGDENGDKVKGSWSKTEDETLVKLVKENGARNWSVISNGIPGRSGKSCRLRWCNQLSPTVQHLPFTPAEDNIIIEAHALHGNKWATISRLLPGRTDNAIKNHWNSTLRRRRTAAPAAVPPITTVPPVTTVVQRVPTAVPMITTGVITGKRVNESYDGDYYKDLLSLGTRYKRPCVMVENNSGSRGSRDGEETVTEDDDAGNKGVNVVRTSLSLFPPGFLKEEEERKEKEKEIEDFEDSNDDLKLLKNEKLRSVLQRMIAEEVRNYVDNMRLGGGLAPDSTLRK