Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94469.t1 | XP_013448295.1 | 92.7 | 275 | 19 | 1 | 1 | 274 | 1 | 275 | 3.30E-143 | 517.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94469.t1 | Q9BSH5 | 34.3 | 201 | 121 | 3 | 65 | 254 | 10 | 210 | 2.0e-24 | 114.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94469.t1 | A0A072TY15 | 92.7 | 275 | 19 | 1 | 1 | 274 | 1 | 275 | 2.4e-143 | 517.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052190 | MS.gene94469 | 0.814671 | 1.37E-51 | -1.69E-46 |
| MS.gene054291 | MS.gene94469 | -0.80239 | 5.74E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene94469 | 0.800084 | 1.70E-48 | -1.69E-46 |
| MS.gene060553 | MS.gene94469 | 0.859238 | 4.75E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94469.t1 | MTR_7g039510 | 92.727 | 275 | 19 | 1 | 1 | 274 | 1 | 275 | 0.0 | 525 |
| MS.gene94469.t1 | MTR_5g040090 | 93.704 | 270 | 14 | 2 | 8 | 274 | 1 | 270 | 0.0 | 516 |
| MS.gene94469.t1 | MTR_7g039510 | 92.520 | 254 | 18 | 1 | 1 | 253 | 1 | 254 | 5.23e-176 | 485 |
| MS.gene94469.t1 | MTR_7g039510 | 92.793 | 222 | 15 | 1 | 1 | 221 | 1 | 222 | 4.49e-153 | 426 |
| MS.gene94469.t1 | MTR_7g039510 | 92.424 | 198 | 14 | 1 | 1 | 197 | 1 | 198 | 1.03e-134 | 379 |
| MS.gene94469.t1 | MTR_7g039510 | 90.341 | 176 | 16 | 1 | 1 | 175 | 1 | 176 | 5.15e-116 | 330 |
| MS.gene94469.t1 | MTR_7g039510 | 90.909 | 176 | 15 | 1 | 1 | 175 | 1 | 176 | 5.50e-116 | 331 |
| MS.gene94469.t1 | MTR_5g040090 | 86.740 | 181 | 19 | 3 | 8 | 185 | 1 | 179 | 2.78e-109 | 314 |
| MS.gene94469.t1 | MTR_7g090370 | 48.585 | 212 | 105 | 3 | 61 | 269 | 63 | 273 | 1.50e-68 | 214 |
| MS.gene94469.t1 | MTR_7g090370 | 49.324 | 148 | 71 | 3 | 64 | 208 | 66 | 212 | 4.82e-44 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94469.t1 | AT1G14310 | 71.963 | 214 | 60 | 0 | 60 | 273 | 40 | 253 | 8.83e-119 | 340 |
| MS.gene94469.t1 | AT2G41250 | 45.714 | 210 | 112 | 2 | 62 | 269 | 77 | 286 | 4.87e-56 | 182 |
Find 76 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATTTGAATTTCGGAAAT+TGG | 0.123909 | 5.1:+30306257 | None:intergenic |
| CGAGAGTAACGAACCGTATT+TGG | 0.176774 | 5.1:+30306059 | None:intergenic |
| AATATTATGCCTCTGGATTA+AGG | 0.258606 | 5.1:+30301720 | None:intergenic |
| GAAACTACAAATTTCCAAAA+TGG | 0.281844 | 5.1:+30303257 | None:intergenic |
| TGGGAACAAGATTTGAATTT+CGG | 0.287556 | 5.1:+30306250 | None:intergenic |
| AGAGAGTGGAAGTGATGAAT+TGG | 0.296251 | 5.1:+30306230 | None:intergenic |
| GAGCATACTTATGCCACTAT+TGG | 0.320572 | 5.1:-30306084 | MS.gene94469:CDS |
| CCTTAAGCGAGAGTCGAAAT+TGG | 0.323043 | 5.1:+30302793 | None:intergenic |
| GATCAAAAGGCAGATAAATT+CGG | 0.345700 | 5.1:-30301907 | MS.gene94469:CDS |
| AGATTTGAATTTCGGAAATT+GGG | 0.365491 | 5.1:+30306258 | None:intergenic |
| CAGGATTGGCCAATTGCAAC+AGG | 0.374423 | 5.1:+30306109 | None:intergenic |
| AACCCCTGCTTTATCTCAGC+TGG | 0.379967 | 5.1:+30304168 | None:intergenic |
| AAAGTCTTCGTCTCCGCAAC+CGG | 0.382971 | 5.1:+30303226 | None:intergenic |
| AGGGTGATGGGAGGCCATTT+TGG | 0.390702 | 5.1:-30303271 | MS.gene94469:CDS |
| ATCAAAAGGCAGATAAATTC+GGG | 0.399235 | 5.1:-30301906 | MS.gene94469:CDS |
| CCAATTTCGACTCTCGCTTA+AGG | 0.402293 | 5.1:-30302793 | MS.gene94469:CDS |
| GATATGTCAAAACAGGTTAT+GGG | 0.403961 | 5.1:-30301783 | MS.gene94469:intron |
| GTGGCATAAGTATGCTCAAC+AGG | 0.404742 | 5.1:+30306090 | None:intergenic |
| GCCACTATTGGATCCAAATA+CGG | 0.421144 | 5.1:-30306072 | MS.gene94469:intron |
| GAGAGTGGAAGTGATGAATT+GGG | 0.427984 | 5.1:+30306231 | None:intergenic |
| GCAATCTATCCCTACGTCAT+TGG | 0.433325 | 5.1:+30301882 | None:intergenic |
| CATAGTCATAGCGGTGGGAC+TGG | 0.450175 | 5.1:-30306171 | MS.gene94469:CDS |
| GTTTCTGAAGCCACCGGTTG+CGG | 0.453257 | 5.1:-30303239 | MS.gene94469:CDS |
| ATGACGTAGGGATAGATTGC+TGG | 0.463114 | 5.1:-30301879 | MS.gene94469:intron |
| AAAATATTTCAAGCTGCTCT+AGG | 0.479897 | 5.1:-30302503 | MS.gene94469:intron |
| TTCCACTCTCTTCTTCAATA+CGG | 0.481169 | 5.1:-30306218 | MS.gene94469:CDS |
| TGGAGGCACCCTGTTGCAAT+TGG | 0.484119 | 5.1:-30306118 | MS.gene94469:CDS |
| CATTGTGTCAAAAGCTCCGT+TGG | 0.494580 | 5.1:+30302962 | None:intergenic |
| TTGATCATCTCCTATGTGCA+AGG | 0.494581 | 5.1:+30301924 | None:intergenic |
| TTGTATCAGCACTATGCAAA+AGG | 0.495938 | 5.1:-30303002 | MS.gene94469:intron |
| TTGTATTTACTACAGGGTGA+TGG | 0.498594 | 5.1:-30303284 | MS.gene94469:intron |
| ATAGTCATAGCGGTGGGACT+GGG | 0.502130 | 5.1:-30306170 | MS.gene94469:CDS |
| TCGCTTAAGGAAGCTATTGA+AGG | 0.502464 | 5.1:-30302780 | MS.gene94469:CDS |
| AATAAGTAATATTATGCCTC+TGG | 0.504476 | 5.1:+30301713 | None:intergenic |
| ATGCCTCTGGATTAAGGATG+CGG | 0.508571 | 5.1:+30301726 | None:intergenic |
| ATGACTCTTCTCAAGGATGC+TGG | 0.508682 | 5.1:-30302942 | MS.gene94469:CDS |
| TGTATTTACTACAGGGTGAT+GGG | 0.508825 | 5.1:-30303283 | MS.gene94469:intron |
| GGTATATGACGCATTACTGT+TGG | 0.515328 | 5.1:-30306145 | MS.gene94469:CDS |
| ATAAGTATGCTCAACAGGAT+TGG | 0.524660 | 5.1:+30306095 | None:intergenic |
| GGGTTTCAGAGCTTTGAAGA+AGG | 0.531266 | 5.1:+30306278 | None:intergenic |
| GACGCATTACTGTTGGATGC+TGG | 0.533706 | 5.1:-30306138 | MS.gene94469:CDS |
| GATCAATTAAATGTAGAGGC+TGG | 0.533838 | 5.1:-30301952 | MS.gene94469:CDS |
| GTCATTATATCATCAGAGGT+TGG | 0.537154 | 5.1:-30302545 | MS.gene94469:CDS |
| TGACACAATGACTCTTCTCA+AGG | 0.537225 | 5.1:-30302949 | MS.gene94469:CDS |
| GCACATAGGAGATGATCAAA+AGG | 0.538144 | 5.1:-30301920 | MS.gene94469:CDS |
| GAATCCAGCTGAGATAAAGC+AGG | 0.541045 | 5.1:-30304172 | MS.gene94469:CDS |
| ACCGTATTTGGATCCAATAG+TGG | 0.547054 | 5.1:+30306071 | None:intergenic |
| AAACAGTGACACAGTTAAGA+TGG | 0.552732 | 5.1:-30302825 | MS.gene94469:intron |
| TTTGTAGTTTCTGAAGCCAC+CGG | 0.553852 | 5.1:-30303245 | MS.gene94469:CDS |
| ATATGTCAAAACAGGTTATG+GGG | 0.583954 | 5.1:-30301782 | MS.gene94469:intron |
| ATTGTGTCAAAAGCTCCGTT+GGG | 0.586008 | 5.1:+30302963 | None:intergenic |
| TGTAGATCAATTAAATGTAG+AGG | 0.592869 | 5.1:-30301956 | MS.gene94469:intron |
| TGCTCTCATAGTCATAGCGG+TGG | 0.593633 | 5.1:-30306177 | MS.gene94469:CDS |
| TGCAGTCATTATATCATCAG+AGG | 0.598140 | 5.1:-30302549 | MS.gene94469:CDS |
| GTCATAGCGGTGGGACTGGG+AGG | 0.602635 | 5.1:-30306167 | MS.gene94469:CDS |
| AATTCGGGGCCAATGACGTA+GGG | 0.606381 | 5.1:-30301891 | MS.gene94469:CDS |
| TCATAGCGGTGGGACTGGGA+GGG | 0.607086 | 5.1:-30306166 | MS.gene94469:CDS |
| AATCCAGCTGAGATAAAGCA+GGG | 0.607959 | 5.1:-30304171 | MS.gene94469:CDS |
| GTCTTCGTCTCCGCAACCGG+TGG | 0.611501 | 5.1:+30303229 | None:intergenic |
| ACTATGCAAAAGGTGATGCA+TGG | 0.630951 | 5.1:-30302992 | MS.gene94469:CDS |
| GCTGGCAAAGCCTTGCACAT+AGG | 0.632234 | 5.1:-30301934 | MS.gene94469:CDS |
| ATCCGTATTGAAGAAGAGAG+TGG | 0.633980 | 5.1:+30306216 | None:intergenic |
| AAATTCGGGGCCAATGACGT+AGG | 0.638294 | 5.1:-30301892 | MS.gene94469:CDS |
| TACGGATCAACAAAGGAGCA+AGG | 0.638438 | 5.1:-30306200 | MS.gene94469:CDS |
| GCTCTCATAGTCATAGCGGT+GGG | 0.640536 | 5.1:-30306176 | MS.gene94469:CDS |
| TCTTCAATACGGATCAACAA+AGG | 0.642550 | 5.1:-30306207 | MS.gene94469:CDS |
| GATGCATGGCATCTTCCCAA+CGG | 0.645781 | 5.1:-30302978 | MS.gene94469:CDS |
| ATTTACTACAGGGTGATGGG+AGG | 0.664583 | 5.1:-30303280 | MS.gene94469:intron |
| AATCCGCATCCTTAATCCAG+AGG | 0.670851 | 5.1:-30301729 | MS.gene94469:CDS |
| ACTCTTCTCAAGGATGCTGG+AGG | 0.671993 | 5.1:-30302939 | MS.gene94469:intron |
| TATGTCAAAACAGGTTATGG+GGG | 0.672904 | 5.1:-30301781 | MS.gene94469:intron |
| AGGATTGGCCAATTGCAACA+GGG | 0.678275 | 5.1:+30306110 | None:intergenic |
| GCATTACTGTTGGATGCTGG+AGG | 0.719310 | 5.1:-30306135 | MS.gene94469:CDS |
| AGGTGCTCTCATAGTCATAG+CGG | 0.727947 | 5.1:-30306180 | MS.gene94469:CDS |
| TCAAAAGGCAGATAAATTCG+GGG | 0.739827 | 5.1:-30301905 | MS.gene94469:CDS |
| ATCCAGCTGAGATAAAGCAG+GGG | 0.746828 | 5.1:-30304170 | MS.gene94469:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAATTTTTAGTTATGT+TGG | + | chr5.1:30305008-30305027 | None:intergenic | 10.0% |
| !! | AACTTATGAATTAACATAAA+AGG | + | chr5.1:30302499-30302518 | None:intergenic | 15.0% |
| !! | ACATTCAATAAAACAAAAAA+TGG | - | chr5.1:30305951-30305970 | MS.gene94469:intron | 15.0% |
| !! | GATTTAAAGAAGAAAAAAAA+AGG | + | chr5.1:30305703-30305722 | None:intergenic | 15.0% |
| !! | TAAAAATTAAAATGACCTAT+TGG | - | chr5.1:30305015-30305034 | MS.gene94469:intron | 15.0% |
| !! | TAAACTAATAGAAAATCATT+AGG | - | chr5.1:30302114-30302133 | MS.gene94469:intron | 15.0% |
| !!! | GTTTTTAATGTTTCATTTTT+TGG | - | chr5.1:30305458-30305477 | MS.gene94469:intron | 15.0% |
| !! | AAAAAATAAGTCAATCCAAA+CGG | - | chr5.1:30302632-30302651 | MS.gene94469:intron | 20.0% |
| !! | AAAACAGATATCTGTTTAAT+TGG | - | chr5.1:30304703-30304722 | MS.gene94469:intron | 20.0% |
| !! | AAATGTTAAGAACACAAATT+TGG | + | chr5.1:30304601-30304620 | None:intergenic | 20.0% |
| !! | AACAAAAATGGAATTGATAT+AGG | - | chr5.1:30304257-30304276 | MS.gene94469:intron | 20.0% |
| !! | ACAAAAATGGAATTGATATA+GGG | - | chr5.1:30304258-30304277 | MS.gene94469:intron | 20.0% |
| !! | ACTAACTACATTTCATTATT+GGG | - | chr5.1:30305342-30305361 | MS.gene94469:intron | 20.0% |
| !! | AGAAAATATCTAATGTAACA+TGG | + | chr5.1:30304648-30304667 | None:intergenic | 20.0% |
| !! | AGTAAAAAATGATATGCTAT+AGG | - | chr5.1:30302688-30302707 | MS.gene94469:intron | 20.0% |
| !! | ATATCTGTTTAATTGGTAAA+TGG | - | chr5.1:30304710-30304729 | MS.gene94469:intron | 20.0% |
| !! | CCAAAAAGAATAATAATAGA+AGG | + | chr5.1:30303813-30303832 | None:intergenic | 20.0% |
| !! | TACTAACTACATTTCATTAT+TGG | - | chr5.1:30305341-30305360 | MS.gene94469:intron | 20.0% |
| !!! | AAAATTTTGAACAACCATAT+TGG | + | chr5.1:30302218-30302237 | None:intergenic | 20.0% |
| !!! | AAACTCAATTGAGAAATTTT+CGG | + | chr5.1:30304439-30304458 | None:intergenic | 20.0% |
| !!! | AATATGTGAAACATTTGTTT+TGG | + | chr5.1:30305662-30305681 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTATATATGCTA+AGG | + | chr5.1:30305754-30305773 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAT+AGG | - | chr5.1:30302075-30302094 | MS.gene94469:intron | 20.0% |
| !!! | CCTTCTATTATTATTCTTTT+TGG | - | chr5.1:30303810-30303829 | MS.gene94469:intron | 20.0% |
| !!! | CTCTAAACATTTTTATACTA+GGG | - | chr5.1:30302284-30302303 | MS.gene94469:intron | 20.0% |
| !!! | TAATGAGTATATTTGTTAAG+AGG | + | chr5.1:30303746-30303765 | None:intergenic | 20.0% |
| !!! | TATAGTTTGTTAGATAAAAC+CGG | - | chr5.1:30303654-30303673 | MS.gene94469:intron | 20.0% |
| !!! | TCTCTAAACATTTTTATACT+AGG | - | chr5.1:30302283-30302302 | MS.gene94469:intron | 20.0% |
| !!! | TGATTTTCTATTAGTTTATC+AGG | + | chr5.1:30302112-30302131 | None:intergenic | 20.0% |
| ! | AAAAATAAGTCAATCCAAAC+GGG | - | chr5.1:30302633-30302652 | MS.gene94469:intron | 25.0% |
| ! | AAAATATCAGGGTCTAATTT+GGG | - | chr5.1:30302368-30302387 | MS.gene94469:intron | 25.0% |
| ! | AACGAAAATTGTATGTTCAT+AGG | - | chr5.1:30302525-30302544 | MS.gene94469:CDS | 25.0% |
| ! | AAGATTTGAATTTCGGAAAT+TGG | + | chr5.1:30301794-30301813 | None:intergenic | 25.0% |
| ! | AATACATCATAGTTCATATG+TGG | - | chr5.1:30303428-30303447 | MS.gene94469:intron | 25.0% |
| ! | ACAACCAAGAAAATAAGTAT+TGG | + | chr5.1:30304467-30304486 | None:intergenic | 25.0% |
| ! | AGATTTGAATTTCGGAAATT+GGG | + | chr5.1:30301793-30301812 | None:intergenic | 25.0% |
| ! | AGGAATTTAACTATCATGAT+AGG | - | chr5.1:30304523-30304542 | MS.gene94469:intron | 25.0% |
| ! | ATAGTTAAATTCCTTTGTAG+TGG | + | chr5.1:30304517-30304536 | None:intergenic | 25.0% |
| ! | ATGTACAAAACTTACATGTA+AGG | + | chr5.1:30305174-30305193 | None:intergenic | 25.0% |
| ! | CAAATAAAACAGAACTAGAA+AGG | + | chr5.1:30304870-30304889 | None:intergenic | 25.0% |
| ! | CTAAATTGATATGTCAAAAC+AGG | - | chr5.1:30306258-30306277 | MS.gene94469:CDS | 25.0% |
| ! | CTACATTTAATTGATCTACA+AGG | + | chr5.1:30306092-30306111 | None:intergenic | 25.0% |
| ! | GAAACTACAAATTTCCAAAA+TGG | + | chr5.1:30304794-30304813 | None:intergenic | 25.0% |
| ! | GATACAATTTCATAACCAAT+AGG | + | chr5.1:30305033-30305052 | None:intergenic | 25.0% |
| ! | GATTTGAATTGGGTATATAT+AGG | + | chr5.1:30304342-30304361 | None:intergenic | 25.0% |
| ! | GTATTATCATATCGAAAGAA+TGG | + | chr5.1:30305324-30305343 | None:intergenic | 25.0% |
| ! | GTTAGAAATTAACTGTAACT+AGG | + | chr5.1:30304680-30304699 | None:intergenic | 25.0% |
| ! | TAGAAAATTGTGAAAGATCA+AGG | - | chr5.1:30302415-30302434 | MS.gene94469:intron | 25.0% |
| ! | TGAAAATGTGTTTATAATCG+AGG | + | chr5.1:30303700-30303719 | None:intergenic | 25.0% |
| ! | TGTAGATCAATTAAATGTAG+AGG | - | chr5.1:30306092-30306111 | MS.gene94469:CDS | 25.0% |
| ! | TTTCTATAAGGGAAAATATG+AGG | - | chr5.1:30304083-30304102 | MS.gene94469:intron | 25.0% |
| ! | TTTGCAAAAAAATAACTTGG+TGG | - | chr5.1:30303493-30303512 | MS.gene94469:intron | 25.0% |
| !! | AAGGCATTATCAGAAATTAA+GGG | + | chr5.1:30305896-30305915 | None:intergenic | 25.0% |
| !! | CTAATTCAGTAATTTTTCCT+CGG | - | chr5.1:30302341-30302360 | MS.gene94469:intron | 25.0% |
| !! | CTGATTGAATTTTCATAGAT+TGG | + | chr5.1:30304907-30304926 | None:intergenic | 25.0% |
| !! | GGAAAATATGAGGAAAATTT+TGG | - | chr5.1:30304093-30304112 | MS.gene94469:intron | 25.0% |
| !! | TAAGGCATTATCAGAAATTA+AGG | + | chr5.1:30305897-30305916 | None:intergenic | 25.0% |
| !! | TTTTCATCAGATACTGAATT+GGG | + | chr5.1:30302248-30302267 | None:intergenic | 25.0% |
| !! | TTTTTCATCAGATACTGAAT+TGG | + | chr5.1:30302249-30302268 | None:intergenic | 25.0% |
| !!! | AATTTAGAAGAAAGAGCATT+AGG | - | chr5.1:30304232-30304251 | MS.gene94469:intron | 25.0% |
| !!! | ACCAAGTTATTTTTTTGCAA+AGG | + | chr5.1:30303494-30303513 | None:intergenic | 25.0% |
| !!! | AGGAAAATTTTGGAAGTTTA+TGG | - | chr5.1:30304103-30304122 | MS.gene94469:intron | 25.0% |
| AAAAAAAGGAATGCCAAGAA+AGG | + | chr5.1:30305689-30305708 | None:intergenic | 30.0% | |
| AAAACTAAGACAATCCAAAC+TGG | + | chr5.1:30302442-30302461 | None:intergenic | 30.0% | |
| AAAATATTTCAAGCTGCTCT+AGG | - | chr5.1:30305545-30305564 | MS.gene94469:intron | 30.0% | |
| AAGAACAAAGAAATGAGTGT+TGG | - | chr5.1:30303006-30303025 | MS.gene94469:intron | 30.0% | |
| AAGGAAAATGCTGACAATAA+AGG | + | chr5.1:30303794-30303813 | None:intergenic | 30.0% | |
| ACACCATATTTATAAGTCCA+GGG | + | chr5.1:30304016-30304035 | None:intergenic | 30.0% | |
| ACATGTAAGGTAAATAGCTT+AGG | + | chr5.1:30305161-30305180 | None:intergenic | 30.0% | |
| ACTACATACCATATCATTGA+AGG | + | chr5.1:30302872-30302891 | None:intergenic | 30.0% | |
| AGGAAAATGCTGACAATAAA+GGG | + | chr5.1:30303793-30303812 | None:intergenic | 30.0% | |
| AGGCATTATCAGAAATTAAG+GGG | + | chr5.1:30305895-30305914 | None:intergenic | 30.0% | |
| ATAAGAGTGACTATCCAATA+TGG | - | chr5.1:30302201-30302220 | MS.gene94469:intron | 30.0% | |
| ATAGAAAACAGCAAGCTTAT+AGG | + | chr5.1:30304070-30304089 | None:intergenic | 30.0% | |
| ATATGTCAAAACAGGTTATG+GGG | - | chr5.1:30306266-30306285 | MS.gene94469:CDS | 30.0% | |
| ATCAAAAGGCAGATAAATTC+GGG | - | chr5.1:30306142-30306161 | MS.gene94469:CDS | 30.0% | |
| ATTTGCTTTCATTTGACAAG+AGG | - | chr5.1:30303184-30303203 | MS.gene94469:intron | 30.0% | |
| CCTGTAGTAAATACAACAAA+GGG | + | chr5.1:30304760-30304779 | None:intergenic | 30.0% | |
| CTCTATTCTTATCTCGTATT+AGG | + | chr5.1:30303539-30303558 | None:intergenic | 30.0% | |
| CTCTTTCTTCTAAATTGTCA+TGG | + | chr5.1:30304228-30304247 | None:intergenic | 30.0% | |
| CTGATGAATGTATCTTAACA+TGG | - | chr5.1:30305436-30305455 | MS.gene94469:intron | 30.0% | |
| GAAAATATCAGGGTCTAATT+TGG | - | chr5.1:30302367-30302386 | MS.gene94469:intron | 30.0% | |
| GAGCATTAGGATAACAAAAA+TGG | - | chr5.1:30304245-30304264 | MS.gene94469:intron | 30.0% | |
| GATATGTCAAAACAGGTTAT+GGG | - | chr5.1:30306265-30306284 | MS.gene94469:CDS | 30.0% | |
| GATCAAAAGGCAGATAAATT+CGG | - | chr5.1:30306141-30306160 | MS.gene94469:CDS | 30.0% | |
| GCCTTTGCAAAAAAATAACT+TGG | - | chr5.1:30303490-30303509 | MS.gene94469:intron | 30.0% | |
| GTCATATACCTTCAATGATA+TGG | - | chr5.1:30302861-30302880 | MS.gene94469:intron | 30.0% | |
| GTTCTTGCAAACTTTAATTG+TGG | - | chr5.1:30306025-30306044 | MS.gene94469:intron | 30.0% | |
| TAAATTGTCATGGATGGTAT+AGG | + | chr5.1:30304218-30304237 | None:intergenic | 30.0% | |
| TACACCATATTTATAAGTCC+AGG | + | chr5.1:30304017-30304036 | None:intergenic | 30.0% | |
| TATGGTATGTAGTAGTGAAA+TGG | - | chr5.1:30302879-30302898 | MS.gene94469:intron | 30.0% | |
| TCTATGAAAATTCAATCAGC+TGG | - | chr5.1:30304908-30304927 | MS.gene94469:intron | 30.0% | |
| TCTTCATAATTTCCTTACGT+TGG | - | chr5.1:30305821-30305840 | MS.gene94469:intron | 30.0% | |
| TGAGATAAGCATGGTTATTA+AGG | + | chr5.1:30305915-30305934 | None:intergenic | 30.0% | |
| TGATATGTCAAAACAGGTTA+TGG | - | chr5.1:30306264-30306283 | MS.gene94469:CDS | 30.0% | |
| TGGGAACAAGATTTGAATTT+CGG | + | chr5.1:30301801-30301820 | None:intergenic | 30.0% | |
| TTAAGAACACAAATTTGGTC+AGG | + | chr5.1:30304596-30304615 | None:intergenic | 30.0% | |
| TTATATTTGCATCATTGGTG+AGG | - | chr5.1:30305367-30305386 | MS.gene94469:intron | 30.0% | |
| TTCTTCTAAATTGTCATGGA+TGG | + | chr5.1:30304224-30304243 | None:intergenic | 30.0% | |
| TTGACCAAGTAATTTCTACT+CGG | - | chr5.1:30303266-30303285 | MS.gene94469:CDS | 30.0% | |
| TTGTTTATCCAAATAGGCAT+AGG | - | chr5.1:30302081-30302100 | MS.gene94469:intron | 30.0% | |
| ! | ACAAGAGGTGTATGAATATA+TGG | - | chr5.1:30303199-30303218 | MS.gene94469:intron | 30.0% |
| ! | AGAGCAGCTTGAAATATTTT+TGG | + | chr5.1:30305545-30305564 | None:intergenic | 30.0% |
| ! | CCTTTGTTGTATTTACTACA+GGG | - | chr5.1:30304758-30304777 | MS.gene94469:intron | 30.0% |
| ! | GAGAAATTTTCGGAAATCTT+GGG | + | chr5.1:30304429-30304448 | None:intergenic | 30.0% |
| ! | GAGCAGCTTGAAATATTTTT+GGG | + | chr5.1:30305544-30305563 | None:intergenic | 30.0% |
| ! | GTTGAATGATTTGGAAAGAA+AGG | - | chr5.1:30302971-30302990 | MS.gene94469:CDS | 30.0% |
| ! | TGAGAAATTTTCGGAAATCT+TGG | + | chr5.1:30304430-30304449 | None:intergenic | 30.0% |
| ! | TTGGTAAATGGCATTTGTTA+TGG | - | chr5.1:30304722-30304741 | MS.gene94469:intron | 30.0% |
| ! | TTGTTGCTTCATTTGTCTTT+GGG | - | chr5.1:30304486-30304505 | MS.gene94469:intron | 30.0% |
| !! | ACGTATTCATTTGTTATGTC+TGG | - | chr5.1:30303837-30303856 | MS.gene94469:intron | 30.0% |
| !! | GACTCCAATACTTATTTTCT+TGG | - | chr5.1:30304460-30304479 | MS.gene94469:intron | 30.0% |
| !! | GCTGTTTTCATAAGCTATAA+TGG | + | chr5.1:30302024-30302043 | None:intergenic | 30.0% |
| !! | TTTTGACACCATTGGTTAAT+AGG | + | chr5.1:30303102-30303121 | None:intergenic | 30.0% |
| !!! | AAGCTTGCTGTTTTCTATAA+GGG | - | chr5.1:30304072-30304091 | MS.gene94469:intron | 30.0% |
| !!! | ATACTGGTTTTGAAAATTCC+TGG | - | chr5.1:30303289-30303308 | MS.gene94469:intron | 30.0% |
| !!! | CTTTTTTGAGGAAGTTTATG+AGG | - | chr5.1:30304841-30304860 | MS.gene94469:intron | 30.0% |
| !!! | TAAGCTTGCTGTTTTCTATA+AGG | - | chr5.1:30304071-30304090 | MS.gene94469:intron | 30.0% |
| AAACAGTGACACAGTTAAGA+TGG | - | chr5.1:30305223-30305242 | MS.gene94469:intron | 35.0% | |
| AATTCAGAGATGAAACACAG+AGG | + | chr5.1:30304368-30304387 | None:intergenic | 35.0% | |
| ACAGAGGAGTGATTTGAATT+GGG | + | chr5.1:30304352-30304371 | None:intergenic | 35.0% | |
| AGACATGAATTAGCGGTTAT+TGG | - | chr5.1:30305977-30305996 | MS.gene94469:intron | 35.0% | |
| AGTAATTTCTACTCGGATAC+TGG | - | chr5.1:30303273-30303292 | MS.gene94469:intron | 35.0% | |
| ATAAGTATGCTCAACAGGAT+TGG | + | chr5.1:30301956-30301975 | None:intergenic | 35.0% | |
| ATGGAAATGGCTCAAAAGTA+AGG | - | chr5.1:30303059-30303078 | MS.gene94469:intron | 35.0% | |
| ATGGCTCAAAAGTAAGGTTA+AGG | - | chr5.1:30303065-30303084 | MS.gene94469:intron | 35.0% | |
| ATTGTATTGAGTTATTGCCC+TGG | - | chr5.1:30303996-30304015 | MS.gene94469:intron | 35.0% | |
| CAAAATCTGCTAGATTGACT+TGG | - | chr5.1:30303117-30303136 | MS.gene94469:intron | 35.0% | |
| CCCTAACTCATTATATCAGA+GGG | + | chr5.1:30302320-30302339 | None:intergenic | 35.0% | |
| CCCTCTGATATAATGAGTTA+GGG | - | chr5.1:30302317-30302336 | MS.gene94469:intron | 35.0% | |
| CCCTGTAGTAAATACAACAA+AGG | + | chr5.1:30304761-30304780 | None:intergenic | 35.0% | |
| CTCAATGGTCTGAAAAACTA+CGG | - | chr5.1:30303920-30303939 | MS.gene94469:intron | 35.0% | |
| CTGTGTTTCATCTCTGAATT+GGG | - | chr5.1:30304368-30304387 | MS.gene94469:intron | 35.0% | |
| GAGACTTAAATACCAACGTA+AGG | + | chr5.1:30305836-30305855 | None:intergenic | 35.0% | |
| GATCAATTAAATGTAGAGGC+TGG | - | chr5.1:30306096-30306115 | MS.gene94469:CDS | 35.0% | |
| GGAAAATGCTGACAATAAAG+GGG | + | chr5.1:30303792-30303811 | None:intergenic | 35.0% | |
| GGGCATTATATTTGCATCAT+TGG | - | chr5.1:30305362-30305381 | MS.gene94469:intron | 35.0% | |
| GTATCCGAGTAGAAATTACT+TGG | + | chr5.1:30303273-30303292 | None:intergenic | 35.0% | |
| GTCATTATATCATCAGAGGT+TGG | - | chr5.1:30305503-30305522 | MS.gene94469:intron | 35.0% | |
| TATATATGCTAAGGAATGCC+AGG | + | chr5.1:30305745-30305764 | None:intergenic | 35.0% | |
| TATGTCAAAACAGGTTATGG+GGG | - | chr5.1:30306267-30306286 | MS.gene94469:CDS | 35.0% | |
| TCAAAAGGCAGATAAATTCG+GGG | - | chr5.1:30306143-30306162 | MS.gene94469:CDS | 35.0% | |
| TCACATATTACCTCCTTTCT+TGG | - | chr5.1:30305673-30305692 | MS.gene94469:intron | 35.0% | |
| TCCCTAACTCATTATATCAG+AGG | + | chr5.1:30302321-30302340 | None:intergenic | 35.0% | |
| TCCCTCTGATATAATGAGTT+AGG | - | chr5.1:30302316-30302335 | MS.gene94469:intron | 35.0% | |
| TCCTCGGTATGAAAATATCA+GGG | - | chr5.1:30302357-30302376 | MS.gene94469:intron | 35.0% | |
| TCTGTGTTTCATCTCTGAAT+TGG | - | chr5.1:30304367-30304386 | MS.gene94469:intron | 35.0% | |
| TCTTCAATACGGATCAACAA+AGG | - | chr5.1:30301841-30301860 | MS.gene94469:intron | 35.0% | |
| TGCACTGTTATATCACATAC+AGG | - | chr5.1:30303312-30303331 | MS.gene94469:intron | 35.0% | |
| TGCAGTCATTATATCATCAG+AGG | - | chr5.1:30305499-30305518 | MS.gene94469:intron | 35.0% | |
| TGGCTCAAAAGTAAGGTTAA+GGG | - | chr5.1:30303066-30303085 | MS.gene94469:intron | 35.0% | |
| TGTATTTACTACAGGGTGAT+GGG | - | chr5.1:30304765-30304784 | MS.gene94469:intron | 35.0% | |
| TTATGGTAAGTTGTAGCATG+AGG | - | chr5.1:30304120-30304139 | MS.gene94469:intron | 35.0% | |
| TTCCACTCTCTTCTTCAATA+CGG | - | chr5.1:30301830-30301849 | MS.gene94469:intron | 35.0% | |
| TTCCTCGGTATGAAAATATC+AGG | - | chr5.1:30302356-30302375 | MS.gene94469:intron | 35.0% | |
| TTGCCCTGGACTTATAAATA+TGG | - | chr5.1:30304010-30304029 | MS.gene94469:intron | 35.0% | |
| TTGGGTATATATAGGAAGAG+AGG | + | chr5.1:30304334-30304353 | None:intergenic | 35.0% | |
| TTGTATCAGCACTATGCAAA+AGG | - | chr5.1:30305046-30305065 | MS.gene94469:intron | 35.0% | |
| TTGTATTTACTACAGGGTGA+TGG | - | chr5.1:30304764-30304783 | MS.gene94469:intron | 35.0% | |
| TTTCCAAATCATTCAACTGC+AGG | + | chr5.1:30302968-30302987 | None:intergenic | 35.0% | |
| ! | ACTCTCTCAAGAGTTTCTTT+TGG | - | chr5.1:30305856-30305875 | MS.gene94469:intron | 35.0% |
| ! | AGACTTTTCTGCAAAGTAAG+CGG | + | chr5.1:30305418-30305437 | None:intergenic | 35.0% |
| ! | CCCTTTGTTGTATTTACTAC+AGG | - | chr5.1:30304757-30304776 | MS.gene94469:intron | 35.0% |
| ! | GCTTATAGCATTCTTTTCAC+TGG | + | chr5.1:30302762-30302781 | None:intergenic | 35.0% |
| ! | GGTTGTTCAAAATTTTTGCG+TGG | - | chr5.1:30302222-30302241 | MS.gene94469:intron | 35.0% |
| ! | GTTGTTGCTTCATTTGTCTT+TGG | - | chr5.1:30304485-30304504 | MS.gene94469:intron | 35.0% |
| ! | TCATGTAAGGTTTTTCGCAT+AGG | - | chr5.1:30303142-30303161 | MS.gene94469:intron | 35.0% |
| ! | TTAAGTTGCTGTGATGGAAA+TGG | - | chr5.1:30303046-30303065 | MS.gene94469:intron | 35.0% |
| !! | AGAAATGAGTGTTGGAAAAC+TGG | - | chr5.1:30303014-30303033 | MS.gene94469:intron | 35.0% |
| !! | ATATGCTTTGTTTCTTCCTC+AGG | - | chr5.1:30305622-30305641 | MS.gene94469:intron | 35.0% |
| !! | CATTTGTTATGTCTGGTTTC+AGG | - | chr5.1:30303844-30303863 | MS.gene94469:intron | 35.0% |
| !!! | AAACGTGTCTTGTTTTCTTG+TGG | - | chr5.1:30305777-30305796 | MS.gene94469:intron | 35.0% |
| !!! | GCTTGAAATATTTTTGGGTC+TGG | + | chr5.1:30305539-30305558 | None:intergenic | 35.0% |
| !!! | TGGGTTTGTTTTTTGTCAGT+TGG | - | chr5.1:30302387-30302406 | MS.gene94469:intron | 35.0% |
| AAAAGGAATGCCAAGAAAGG+AGG | + | chr5.1:30305686-30305705 | None:intergenic | 40.0% | |
| AAGAGAGGAGTGAAAAGAAG+AGG | + | chr5.1:30304319-30304338 | None:intergenic | 40.0% | |
| AATCCAGCTGAGATAAAGCA+GGG | - | chr5.1:30303877-30303896 | MS.gene94469:intron | 40.0% | |
| ACAGCTTAGTGAGATAAGCA+TGG | + | chr5.1:30305924-30305943 | None:intergenic | 40.0% | |
| ACCGTATTTGGATCCAATAG+TGG | + | chr5.1:30301980-30301999 | None:intergenic | 40.0% | |
| ACTATGCAAAAGGTGATGCA+TGG | - | chr5.1:30305056-30305075 | MS.gene94469:intron | 40.0% | |
| AGAGAGGAGTGAAAAGAAGA+GGG | + | chr5.1:30304318-30304337 | None:intergenic | 40.0% | |
| AGAGAGTGGAAGTGATGAAT+TGG | + | chr5.1:30301821-30301840 | None:intergenic | 40.0% | |
| AGGTATCACCTATGCCTATT+TGG | + | chr5.1:30302092-30302111 | None:intergenic | 40.0% | |
| ATCCGTATTGAAGAAGAGAG+TGG | + | chr5.1:30301835-30301854 | None:intergenic | 40.0% | |
| ATGGCTCAGACATGAATTAG+CGG | - | chr5.1:30305970-30305989 | MS.gene94469:intron | 40.0% | |
| ATGTGATATAACAGTGCACC+AGG | + | chr5.1:30303310-30303329 | None:intergenic | 40.0% | |
| ATTGTGTCAAAAGCTCCGTT+GGG | + | chr5.1:30305088-30305107 | None:intergenic | 40.0% | |
| CACAGAGGAGTGATTTGAAT+TGG | + | chr5.1:30304353-30304372 | None:intergenic | 40.0% | |
| CACTGTTTGTCATGTTAGCA+AGG | + | chr5.1:30305211-30305230 | None:intergenic | 40.0% | |
| GAAATCTTGGGAGTTAGGAA+AGG | + | chr5.1:30304417-30304436 | None:intergenic | 40.0% | |
| GACTTGTGGTGCATTAATGT+GGG | - | chr5.1:30303404-30303423 | MS.gene94469:intron | 40.0% | |
| GAGAGTGGAAGTGATGAATT+GGG | + | chr5.1:30301820-30301839 | None:intergenic | 40.0% | |
| GAGCATACTTATGCCACTAT+TGG | - | chr5.1:30301964-30301983 | MS.gene94469:intron | 40.0% | |
| GCACATAGGAGATGATCAAA+AGG | - | chr5.1:30306128-30306147 | MS.gene94469:CDS | 40.0% | |
| GCCACTATTGGATCCAAATA+CGG | - | chr5.1:30301976-30301995 | MS.gene94469:intron | 40.0% | |
| GGTATATGACGCATTACTGT+TGG | - | chr5.1:30301903-30301922 | MS.gene94469:CDS | 40.0% | |
| GTAAGGTTAAGGGATTCCTT+TGG | - | chr5.1:30303076-30303095 | MS.gene94469:intron | 40.0% | |
| GTCATGGATGGTATAGGTTA+AGG | + | chr5.1:30304212-30304231 | None:intergenic | 40.0% | |
| GTCTGAAAAACTACGGTATC+AGG | - | chr5.1:30303927-30303946 | MS.gene94469:intron | 40.0% | |
| TCCTTTGGCCTATTAACCAA+TGG | - | chr5.1:30303091-30303110 | MS.gene94469:intron | 40.0% | |
| TCGCTTAAGGAAGCTATTGA+AGG | - | chr5.1:30305268-30305287 | MS.gene94469:intron | 40.0% | |
| TGAAAGATCAAGGACCAGTT+TGG | - | chr5.1:30302425-30302444 | MS.gene94469:intron | 40.0% | |
| TGACACAATGACTCTTCTCA+AGG | - | chr5.1:30305099-30305118 | MS.gene94469:intron | 40.0% | |
| TTGATCATCTCCTATGTGCA+AGG | + | chr5.1:30306127-30306146 | None:intergenic | 40.0% | |
| TTGCCTGCAGTTGAATGATT+TGG | - | chr5.1:30302962-30302981 | MS.gene94469:CDS | 40.0% | |
| TTTCGGAAATCTTGGGAGTT+AGG | + | chr5.1:30304422-30304441 | None:intergenic | 40.0% | |
| ! | ACCATTGGTTAATAGGCCAA+AGG | + | chr5.1:30303095-30303114 | None:intergenic | 40.0% |
| ! | ACCCTGATATTTTCATACCG+AGG | + | chr5.1:30302361-30302380 | None:intergenic | 40.0% |
| ! | AGCTCTGACAAAAAGTGATG+AGG | + | chr5.1:30303975-30303994 | None:intergenic | 40.0% |
| ! | AGGAGATTAAGTTGCTGTGA+TGG | - | chr5.1:30303040-30303059 | MS.gene94469:intron | 40.0% |
| ! | CTTTGTTTCTTCCTCAGGAA+CGG | - | chr5.1:30305627-30305646 | MS.gene94469:intron | 40.0% |
| ! | GAACATTTGGCTCAGTTTGA+TGG | - | chr5.1:30302938-30302957 | MS.gene94469:intron | 40.0% |
| ! | TGACTTGTGGTGCATTAATG+TGG | - | chr5.1:30303403-30303422 | MS.gene94469:intron | 40.0% |
| !! | CTAGCAGATTTTGACACCAT+TGG | + | chr5.1:30303110-30303129 | None:intergenic | 40.0% |
| !! | GATTGACTTGGTCTCATGTA+AGG | - | chr5.1:30303129-30303148 | MS.gene94469:intron | 40.0% |
| !! | TTAGATAAAACCGGCTTGCA+AGG | - | chr5.1:30303663-30303682 | MS.gene94469:intron | 40.0% |
| !! | TTTGTAGTTTCTGAAGCCAC+CGG | - | chr5.1:30304803-30304822 | MS.gene94469:intron | 40.0% |
| !! | TTTTGAGTGAATCAAGCACC+TGG | - | chr5.1:30303340-30303359 | MS.gene94469:intron | 40.0% |
| AAGAGGGCAAGCATGATTTG+TGG | + | chr5.1:30304302-30304321 | None:intergenic | 45.0% | |
| AATCAAGCACCTGGAGTTTG+CGG | - | chr5.1:30303349-30303368 | MS.gene94469:intron | 45.0% | |
| AATCCGCATCCTTAATCCAG+AGG | - | chr5.1:30306319-30306338 | MS.gene94469:CDS | 45.0% | |
| AGGTGCTCTCATAGTCATAG+CGG | - | chr5.1:30301868-30301887 | MS.gene94469:intron | 45.0% | |
| ATCCAGCTGAGATAAAGCAG+GGG | - | chr5.1:30303878-30303897 | MS.gene94469:intron | 45.0% | |
| ATCTCGTATTAGGCCCTGTT+TGG | + | chr5.1:30303529-30303548 | None:intergenic | 45.0% | |
| ATGACGTAGGGATAGATTGC+TGG | - | chr5.1:30306169-30306188 | MS.gene94469:CDS | 45.0% | |
| ATGACTCTTCTCAAGGATGC+TGG | - | chr5.1:30305106-30305125 | MS.gene94469:intron | 45.0% | |
| ATGCCTCTGGATTAAGGATG+CGG | + | chr5.1:30306325-30306344 | None:intergenic | 45.0% | |
| ATGCTGACAATAAAGGGGTG+TGG | + | chr5.1:30303787-30303806 | None:intergenic | 45.0% | |
| ATGTAGTAGTGAAATGGCCG+AGG | - | chr5.1:30302885-30302904 | MS.gene94469:intron | 45.0% | |
| CATAGTTCATATGTGGCTGC+TGG | - | chr5.1:30303435-30303454 | MS.gene94469:intron | 45.0% | |
| CATTGTGTCAAAAGCTCCGT+TGG | + | chr5.1:30305089-30305108 | None:intergenic | 45.0% | |
| CCAATTTCGACTCTCGCTTA+AGG | - | chr5.1:30305255-30305274 | MS.gene94469:intron | 45.0% | |
| CCTTAAGCGAGAGTCGAAAT+TGG | + | chr5.1:30305258-30305277 | None:intergenic | 45.0% | |
| CGAGAGTAACGAACCGTATT+TGG | + | chr5.1:30301992-30302011 | None:intergenic | 45.0% | |
| CTAAGGAATGCCAGGAAGAA+AGG | + | chr5.1:30305737-30305756 | None:intergenic | 45.0% | |
| GAATCCAGCTGAGATAAAGC+AGG | - | chr5.1:30303876-30303895 | MS.gene94469:intron | 45.0% | |
| GCAATCTATCCCTACGTCAT+TGG | + | chr5.1:30306169-30306188 | None:intergenic | 45.0% | |
| GGTAAGTTGTAGCATGAGGA+AGG | - | chr5.1:30304124-30304143 | MS.gene94469:CDS | 45.0% | |
| GGTTGTCTCTACATTGCACA+GGG | - | chr5.1:30302907-30302926 | MS.gene94469:intron | 45.0% | |
| GTGGCATAAGTATGCTCAAC+AGG | + | chr5.1:30301961-30301980 | None:intergenic | 45.0% | |
| GTTGCTTGTGTGATGACTTG+TGG | - | chr5.1:30303390-30303409 | MS.gene94469:intron | 45.0% | |
| GTTGTCTCTACATTGCACAG+GGG | - | chr5.1:30302908-30302927 | MS.gene94469:intron | 45.0% | |
| TACGGATCAACAAAGGAGCA+AGG | - | chr5.1:30301848-30301867 | MS.gene94469:intron | 45.0% | |
| TGCAATGTAGAGACAACCCT+CGG | + | chr5.1:30302905-30302924 | None:intergenic | 45.0% | |
| TGGTTTGACCTTGCCAAACA+GGG | - | chr5.1:30303513-30303532 | MS.gene94469:intron | 45.0% | |
| TGTAGTAGTGAAATGGCCGA+GGG | - | chr5.1:30302886-30302905 | MS.gene94469:intron | 45.0% | |
| TTAGGAAAGGCTTGAGGCAA+AGG | + | chr5.1:30304404-30304423 | None:intergenic | 45.0% | |
| TTTGGGCTTCTCCACTACAA+AGG | - | chr5.1:30304503-30304522 | MS.gene94469:intron | 45.0% | |
| !! | AGGATTGGCCAATTGCAACA+GGG | + | chr5.1:30301941-30301960 | None:intergenic | 45.0% |
| !! | ATTTACTACAGGGTGATGGG+AGG | - | chr5.1:30304768-30304787 | MS.gene94469:intron | 45.0% |
| !! | GAGTGTTGGAAAACTGGTTG+AGG | - | chr5.1:30303020-30303039 | MS.gene94469:intron | 45.0% |
| !! | GGGTTTCAGAGCTTTGAAGA+AGG | + | chr5.1:30301773-30301792 | None:intergenic | 45.0% |
| !!! | AGAGAGCGTTTTCTGCTCAA+TGG | - | chr5.1:30303905-30303924 | MS.gene94469:intron | 45.0% |
| !!! | CGGAGACGAAGACTTTTTTG+AGG | - | chr5.1:30304829-30304848 | MS.gene94469:intron | 45.0% |
| AAAGTCTTCGTCTCCGCAAC+CGG | + | chr5.1:30304825-30304844 | None:intergenic | 50.0% | |
| AAATTCGGGGCCAATGACGT+AGG | - | chr5.1:30306156-30306175 | MS.gene94469:CDS | 50.0% | |
| AACCCCTGCTTTATCTCAGC+TGG | + | chr5.1:30303883-30303902 | None:intergenic | 50.0% | |
| AATTCGGGGCCAATGACGTA+GGG | - | chr5.1:30306157-30306176 | MS.gene94469:CDS | 50.0% | |
| ACTCCTCCTACTTCACACAC+TGG | + | chr5.1:30304184-30304203 | None:intergenic | 50.0% | |
| ACTCTTCTCAAGGATGCTGG+AGG | - | chr5.1:30305109-30305128 | MS.gene94469:intron | 50.0% | |
| ATAGTCATAGCGGTGGGACT+GGG | - | chr5.1:30301878-30301897 | MS.gene94469:intron | 50.0% | |
| ATCAAGCACCTGGAGTTTGC+GGG | - | chr5.1:30303350-30303369 | MS.gene94469:intron | 50.0% | |
| CAACTCCCAGTGTGTGAAGT+AGG | - | chr5.1:30304175-30304194 | MS.gene94469:CDS | 50.0% | |
| CTCCTCCTACTTCACACACT+GGG | + | chr5.1:30304183-30304202 | None:intergenic | 50.0% | |
| GACACAATTTGCGACCCGTT+TGG | + | chr5.1:30302650-30302669 | None:intergenic | 50.0% | |
| GACGCATTACTGTTGGATGC+TGG | - | chr5.1:30301910-30301929 | MS.gene94469:CDS | 50.0% | |
| GATGCATGGCATCTTCCCAA+CGG | - | chr5.1:30305070-30305089 | MS.gene94469:intron | 50.0% | |
| GCATTACTGTTGGATGCTGG+AGG | - | chr5.1:30301913-30301932 | MS.gene94469:CDS | 50.0% | |
| GCTCTCATAGTCATAGCGGT+GGG | - | chr5.1:30301872-30301891 | MS.gene94469:intron | 50.0% | |
| GGGTTGTCTCTACATTGCAC+AGG | - | chr5.1:30302906-30302925 | MS.gene94469:intron | 50.0% | |
| GTATTAGGCCCTGTTTGGCA+AGG | + | chr5.1:30303524-30303543 | None:intergenic | 50.0% | |
| GTGGTTTGACCTTGCCAAAC+AGG | - | chr5.1:30303512-30303531 | MS.gene94469:intron | 50.0% | |
| TACATTGCACAGGGGCTGTT+GGG | - | chr5.1:30302916-30302935 | MS.gene94469:intron | 50.0% | |
| TCACAGCTTGCCTTTCTTCC+TGG | - | chr5.1:30305724-30305743 | MS.gene94469:intron | 50.0% | |
| TCTTGCGAGATCTGATCTGC+TGG | - | chr5.1:30303226-30303245 | MS.gene94469:CDS | 50.0% | |
| TGCTCTCATAGTCATAGCGG+TGG | - | chr5.1:30301871-30301890 | MS.gene94469:intron | 50.0% | |
| TGGGAGTTAGGAAAGGCTTG+AGG | + | chr5.1:30304410-30304429 | None:intergenic | 50.0% | |
| TTCATATGTGGCTGCTGGTG+TGG | - | chr5.1:30303440-30303459 | MS.gene94469:intron | 50.0% | |
| !! | CAGGATTGGCCAATTGCAAC+AGG | + | chr5.1:30301942-30301961 | None:intergenic | 50.0% |
| !! | TCATGAGTGAAGCACCGAGA+GGG | - | chr5.1:30302782-30302801 | MS.gene94469:CDS | 50.0% |
| CAGGGGCTGTTGGGAACATT+TGG | - | chr5.1:30302925-30302944 | MS.gene94469:intron | 55.0% | |
| CATAGTCATAGCGGTGGGAC+TGG | - | chr5.1:30301877-30301896 | MS.gene94469:intron | 55.0% | |
| CTACATTGCACAGGGGCTGT+TGG | - | chr5.1:30302915-30302934 | MS.gene94469:intron | 55.0% | |
| CTCCCAGTGTGTGAAGTAGG+AGG | - | chr5.1:30304178-30304197 | MS.gene94469:CDS | 55.0% | |
| GAAATGCACCCGCAAACTCC+AGG | + | chr5.1:30303361-30303380 | None:intergenic | 55.0% | |
| GAGTCTCTCACCTTGCAAGC+CGG | + | chr5.1:30303676-30303695 | None:intergenic | 55.0% | |
| GCTGGCAAAGCCTTGCACAT+AGG | - | chr5.1:30306114-30306133 | MS.gene94469:CDS | 55.0% | |
| GGTTCAACACTCCGTTCCTG+AGG | + | chr5.1:30305641-30305660 | None:intergenic | 55.0% | |
| !! | CATGAGTGAAGCACCGAGAG+GGG | - | chr5.1:30302783-30302802 | MS.gene94469:CDS | 55.0% |
| !! | CTCATGAGTGAAGCACCGAG+AGG | - | chr5.1:30302781-30302800 | MS.gene94469:CDS | 55.0% |
| !! | GTTTCTGAAGCCACCGGTTG+CGG | - | chr5.1:30304809-30304828 | MS.gene94469:intron | 55.0% |
| !! | TGGAGGCACCCTGTTGCAAT+TGG | - | chr5.1:30301930-30301949 | MS.gene94469:CDS | 55.0% |
| !!! | AGGGTGATGGGAGGCCATTT+TGG | - | chr5.1:30304777-30304796 | MS.gene94469:intron | 55.0% |
| CAGCCACACAGTTCCCCTCT+CGG | + | chr5.1:30302799-30302818 | None:intergenic | 60.0% | |
| GAGAGGGGAACTGTGTGGCT+GGG | - | chr5.1:30302798-30302817 | MS.gene94469:CDS | 60.0% | |
| TCATAGCGGTGGGACTGGGA+GGG | - | chr5.1:30301882-30301901 | MS.gene94469:CDS | 60.0% | |
| CGAGAGGGGAACTGTGTGGC+TGG | - | chr5.1:30302797-30302816 | MS.gene94469:CDS | 65.0% | |
| GCACCGAGAGGGGAACTGTG+TGG | - | chr5.1:30302793-30302812 | MS.gene94469:CDS | 65.0% | |
| GGGAACTGTGTGGCTGGGTG+TGG | - | chr5.1:30302803-30302822 | MS.gene94469:CDS | 65.0% | |
| GTCATAGCGGTGGGACTGGG+AGG | - | chr5.1:30301881-30301900 | MS.gene94469:CDS | 65.0% | |
| GTCTTCGTCTCCGCAACCGG+TGG | + | chr5.1:30304822-30304841 | None:intergenic | 65.0% | |
| CTGTGTGGCTGGGTGTGGCG+TGG | - | chr5.1:30302808-30302827 | MS.gene94469:CDS | 70.0% | |
| TGTGGCTGGGTGTGGCGTGG+TGG | - | chr5.1:30302811-30302830 | MS.gene94469:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 30301724 | 30306346 | 30301724 | ID=MS.gene94469 |
| chr5.1 | mRNA | 30301724 | 30306346 | 30301724 | ID=MS.gene94469.t1;Parent=MS.gene94469 |
| chr5.1 | exon | 30306073 | 30306346 | 30306073 | ID=MS.gene94469.t1.exon1;Parent=MS.gene94469.t1 |
| chr5.1 | CDS | 30306073 | 30306346 | 30306073 | ID=cds.MS.gene94469.t1;Parent=MS.gene94469.t1 |
| chr5.1 | exon | 30304122 | 30304204 | 30304122 | ID=MS.gene94469.t1.exon2;Parent=MS.gene94469.t1 |
| chr5.1 | CDS | 30304122 | 30304204 | 30304122 | ID=cds.MS.gene94469.t1;Parent=MS.gene94469.t1 |
| chr5.1 | exon | 30303208 | 30303291 | 30303208 | ID=MS.gene94469.t1.exon3;Parent=MS.gene94469.t1 |
| chr5.1 | CDS | 30303208 | 30303291 | 30303208 | ID=cds.MS.gene94469.t1;Parent=MS.gene94469.t1 |
| chr5.1 | exon | 30302940 | 30303015 | 30302940 | ID=MS.gene94469.t1.exon4;Parent=MS.gene94469.t1 |
| chr5.1 | CDS | 30302940 | 30303015 | 30302940 | ID=cds.MS.gene94469.t1;Parent=MS.gene94469.t1 |
| chr5.1 | exon | 30302761 | 30302833 | 30302761 | ID=MS.gene94469.t1.exon5;Parent=MS.gene94469.t1 |
| chr5.1 | CDS | 30302761 | 30302833 | 30302761 | ID=cds.MS.gene94469.t1;Parent=MS.gene94469.t1 |
| chr5.1 | exon | 30302504 | 30302577 | 30302504 | ID=MS.gene94469.t1.exon6;Parent=MS.gene94469.t1 |
| chr5.1 | CDS | 30302504 | 30302577 | 30302504 | ID=cds.MS.gene94469.t1;Parent=MS.gene94469.t1 |
| chr5.1 | exon | 30301880 | 30301973 | 30301880 | ID=MS.gene94469.t1.exon7;Parent=MS.gene94469.t1 |
| chr5.1 | CDS | 30301880 | 30301973 | 30301880 | ID=cds.MS.gene94469.t1;Parent=MS.gene94469.t1 |
| chr5.1 | exon | 30301724 | 30301790 | 30301724 | ID=MS.gene94469.t1.exon8;Parent=MS.gene94469.t1 |
| chr5.1 | CDS | 30301724 | 30301790 | 30301724 | ID=cds.MS.gene94469.t1;Parent=MS.gene94469.t1 |
| Gene Sequence |
| Protein sequence |
