Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94633.t1 | XP_013464887.1 | 99.5 | 1026 | 5 | 0 | 1 | 1026 | 1 | 1026 | 0.00E+00 | 2000.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94633.t1 | Q8LPL6 | 81.5 | 1027 | 172 | 7 | 3 | 1026 | 1 | 1012 | 0.0e+00 | 1634.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94633.t1 | A0A072VAY5 | 99.5 | 1026 | 5 | 0 | 1 | 1026 | 1 | 1026 | 0.0e+00 | 2000.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059028 | MS.gene94633 | 0.856422 | 3.25E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene94633 | MS.gene27073 | PPI |
| MS.gene94633 | MS.gene073113 | PPI |
| MS.gene94633 | MS.gene64216 | PPI |
| MS.gene91504 | MS.gene94633 | PPI |
| MS.gene94633 | MS.gene64013 | PPI |
| MS.gene35343 | MS.gene94633 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94633.t1 | MTR_2g084610 | 99.513 | 1026 | 5 | 0 | 1 | 1026 | 1 | 1026 | 0.0 | 2108 |
| MS.gene94633.t1 | MTR_5g034780 | 31.527 | 609 | 384 | 15 | 4 | 598 | 6 | 595 | 8.48e-85 | 293 |
| MS.gene94633.t1 | MTR_8g063690 | 30.066 | 602 | 387 | 13 | 12 | 598 | 13 | 595 | 2.75e-78 | 275 |
| MS.gene94633.t1 | MTR_8g072250 | 24.191 | 587 | 404 | 15 | 12 | 579 | 28 | 592 | 5.80e-51 | 195 |
| MS.gene94633.t1 | MTR_8g104380 | 21.910 | 534 | 351 | 16 | 29 | 543 | 36 | 522 | 1.28e-19 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94633.t1 | AT5G22780 | 81.128 | 1028 | 175 | 8 | 3 | 1026 | 1 | 1013 | 0.0 | 1700 |
| MS.gene94633.t1 | AT5G22780 | 81.128 | 1028 | 175 | 8 | 3 | 1026 | 1 | 1013 | 0.0 | 1700 |
| MS.gene94633.t1 | AT5G22770 | 81.287 | 1026 | 176 | 6 | 3 | 1026 | 1 | 1012 | 0.0 | 1696 |
| MS.gene94633.t1 | AT5G22770 | 81.287 | 1026 | 176 | 6 | 3 | 1026 | 1 | 1012 | 0.0 | 1696 |
| MS.gene94633.t1 | AT5G22770 | 81.287 | 1026 | 176 | 6 | 3 | 1026 | 1 | 1012 | 0.0 | 1696 |
| MS.gene94633.t1 | AT5G22770 | 81.287 | 1026 | 176 | 6 | 3 | 1026 | 1 | 1012 | 0.0 | 1696 |
| MS.gene94633.t1 | AT5G22770 | 81.287 | 1026 | 176 | 6 | 3 | 1026 | 1 | 1012 | 0.0 | 1696 |
| MS.gene94633.t1 | AT5G22770 | 81.287 | 1026 | 176 | 6 | 3 | 1026 | 1 | 1012 | 0.0 | 1696 |
| MS.gene94633.t1 | AT1G23900 | 30.598 | 585 | 376 | 10 | 4 | 576 | 6 | 572 | 1.31e-82 | 287 |
| MS.gene94633.t1 | AT1G23900 | 30.598 | 585 | 376 | 10 | 4 | 576 | 6 | 572 | 1.31e-82 | 287 |
| MS.gene94633.t1 | AT1G23900 | 30.329 | 577 | 373 | 9 | 12 | 576 | 1 | 560 | 2.57e-82 | 286 |
| MS.gene94633.t1 | AT1G60070 | 30.945 | 614 | 381 | 14 | 4 | 598 | 6 | 595 | 1.98e-81 | 283 |
| MS.gene94633.t1 | AT1G60070 | 30.945 | 614 | 381 | 14 | 4 | 598 | 6 | 595 | 5.47e-81 | 283 |
| MS.gene94633.t1 | AT1G31730 | 24.958 | 589 | 397 | 15 | 12 | 579 | 28 | 592 | 6.24e-53 | 201 |
| MS.gene94633.t1 | AT1G23935 | 33.884 | 242 | 141 | 5 | 12 | 250 | 873 | 1098 | 2.99e-27 | 120 |
| MS.gene94633.t1 | AT1G23935 | 33.884 | 242 | 141 | 5 | 12 | 250 | 874 | 1099 | 3.15e-27 | 120 |
| MS.gene94633.t1 | AT1G23935 | 33.884 | 242 | 141 | 5 | 12 | 250 | 924 | 1149 | 4.48e-27 | 120 |
| MS.gene94633.t1 | AT1G48760 | 24.033 | 362 | 241 | 10 | 44 | 403 | 47 | 376 | 5.29e-19 | 93.6 |
| MS.gene94633.t1 | AT1G48760 | 24.033 | 362 | 241 | 10 | 44 | 403 | 47 | 376 | 5.29e-19 | 93.6 |
| MS.gene94633.t1 | AT1G48760 | 24.033 | 362 | 241 | 10 | 44 | 403 | 47 | 376 | 5.29e-19 | 93.6 |
Find 245 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGATCTTCTGGTATT+TGG | 0.099720 | 2.4:+14763134 | None:intergenic |
| ATCATTACGCACGGTATTTA+TGG | 0.160999 | 2.4:+14764690 | None:intergenic |
| CGTGCTCTAGATTTGCTTTA+TGG | 0.190420 | 2.4:-14761715 | MS.gene94633:CDS |
| CAAAGATTATCCCAGGAAAA+TGG | 0.207137 | 2.4:-14759164 | MS.gene94633:CDS |
| GACGCTCTTGTTCTTTGTTC+TGG | 0.218894 | 2.4:+14768645 | None:intergenic |
| AAACCAAGATAACGAATATT+TGG | 0.224231 | 2.4:+14762338 | None:intergenic |
| CTGCTGAGCGCGCAACTTAA+TGG | 0.241977 | 2.4:+14759457 | None:intergenic |
| AAATATTGCTGAAAGATTTC+AGG | 0.242261 | 2.4:-14758406 | MS.gene94633:CDS |
| CGAAGTTGGGTTCTGTCTGC+TGG | 0.245266 | 2.4:+14756438 | None:intergenic |
| CATATCTGATTCTGCAGTTC+AGG | 0.254292 | 2.4:+14759868 | None:intergenic |
| GCCTCCCGTCCATTTGAAAA+TGG | 0.256640 | 2.4:-14758065 | MS.gene94633:CDS |
| CTTGGCTATGATGTGGATTT+TGG | 0.259557 | 2.4:-14764985 | MS.gene94633:CDS |
| TCAGTCTGCATTAATTAAAA+AGG | 0.262771 | 2.4:-14759516 | MS.gene94633:intron |
| ACCTGTCGTTCCGGGAATTT+AGG | 0.283541 | 2.4:+14759636 | None:intergenic |
| ACTACAGTCCCTTCCGTTCC+TGG | 0.289345 | 2.4:+14759023 | None:intergenic |
| CTTCGAATGACGGTTGCTTC+AGG | 0.289562 | 2.4:-14756420 | MS.gene94633:CDS |
| ATAATGCTAAATATTTCTTT+TGG | 0.300814 | 2.4:+14760063 | None:intergenic |
| ACAGGTTAGTGCATATTTAC+TGG | 0.312471 | 2.4:-14760127 | MS.gene94633:intron |
| GGATCGAATGGCTCAACTTT+TGG | 0.313168 | 2.4:-14763531 | MS.gene94633:CDS |
| CTCCTGCCCAACAGGGACTA+TGG | 0.317344 | 2.4:+14758989 | None:intergenic |
| TATCCCATCTCCCTGGCTTC+AGG | 0.319887 | 2.4:-14763348 | MS.gene94633:intron |
| TGGTGATCTGTTGGGTCCTT+TGG | 0.328939 | 2.4:-14759096 | MS.gene94633:CDS |
| TCTTCCGGAGATATAGTTAT+AGG | 0.333337 | 2.4:+14757354 | None:intergenic |
| ATATGAGGATCCTTATATTC+AGG | 0.335516 | 2.4:-14758355 | MS.gene94633:intron |
| TTTCAGCCAATATATCCATT+AGG | 0.336927 | 2.4:+14759661 | None:intergenic |
| TTGGGTCCTTTGGCTATTGA+AGG | 0.337846 | 2.4:-14759086 | MS.gene94633:CDS |
| AACCTCAAACAATGATCTTC+TGG | 0.338167 | 2.4:+14763127 | None:intergenic |
| GAACTGGCCTCCTGCCCAAC+AGG | 0.340786 | 2.4:+14758981 | None:intergenic |
| CCTGCAGCATTGAATGATCC+TGG | 0.342034 | 2.4:-14756181 | MS.gene94633:CDS |
| AGTTTGCACCAGATCTTTCA+TGG | 0.342933 | 2.4:-14761420 | MS.gene94633:intron |
| GGCTGAAATGCCTAAATTCC+CGG | 0.343358 | 2.4:-14759646 | MS.gene94633:CDS |
| GGGGAATTTGGACACCTTCT+GGG | 0.343988 | 2.4:-14760105 | MS.gene94633:CDS |
| ATTGACTTCTCATACAAGTT+TGG | 0.346238 | 2.4:-14757866 | MS.gene94633:CDS |
| ATATCAAAATTCAAATGCTT+TGG | 0.360318 | 2.4:-14759432 | MS.gene94633:CDS |
| GAACCAAATATTCGTTATCT+TGG | 0.362079 | 2.4:-14762341 | MS.gene94633:CDS |
| CACCTTCTGGGGAGACGACC+TGG | 0.363747 | 2.4:-14760093 | MS.gene94633:CDS |
| CCACAAGAATACACTTACTA+TGG | 0.364253 | 2.4:-14763371 | MS.gene94633:CDS |
| AAATATTCGTTATCTTGGTT+TGG | 0.367973 | 2.4:-14762336 | MS.gene94633:intron |
| TGCAGCCCTAATGGATATAT+TGG | 0.368706 | 2.4:-14759667 | MS.gene94633:CDS |
| CTGAACTGCAGAATCAGATA+TGG | 0.369114 | 2.4:-14759867 | MS.gene94633:CDS |
| TGCTACAAGGTTGTTTGGAT+TGG | 0.369470 | 2.4:+14756928 | None:intergenic |
| AGAGCGGCTTGCCAGGAATC+AGG | 0.372562 | 2.4:-14763399 | MS.gene94633:CDS |
| TTCAGCCAATATATCCATTA+GGG | 0.374478 | 2.4:+14759662 | None:intergenic |
| ACCACTTCCACTACTTGAAA+TGG | 0.377012 | 2.4:-14757109 | MS.gene94633:CDS |
| GTACTTGCTACAAGGTTGTT+TGG | 0.386349 | 2.4:+14756923 | None:intergenic |
| CCGCAATGGAGATCACTTCC+TGG | 0.387679 | 2.4:-14757324 | MS.gene94633:CDS |
| GCATCGGCGATGGCGATGTC+GGG | 0.391062 | 2.4:-14768710 | None:intergenic |
| TTGTGGGATATCCTGATTCC+TGG | 0.391145 | 2.4:+14763388 | None:intergenic |
| CTTCAATTAATTGACAAGGC+TGG | 0.393034 | 2.4:-14760719 | MS.gene94633:CDS |
| CCTTCAATGAGGTAATAATC+TGG | 0.393038 | 2.4:+14762024 | None:intergenic |
| TCCGTTCCTGGATTTGAGCT+TGG | 0.393297 | 2.4:+14759035 | None:intergenic |
| GCTACAAGGTTGTTTGGATT+GGG | 0.394711 | 2.4:+14756929 | None:intergenic |
| GACAGAAGAATAGAGATAGT+AGG | 0.397221 | 2.4:+14759931 | None:intergenic |
| TAGAAAAGGTGCAGCCCTAA+TGG | 0.404876 | 2.4:-14759676 | MS.gene94633:CDS |
| CCAGATTATTACCTCATTGA+AGG | 0.405909 | 2.4:-14762024 | MS.gene94633:CDS |
| TTCAATTAATTGACAAGGCT+GGG | 0.408241 | 2.4:-14760718 | MS.gene94633:CDS |
| CATACATGAGACAATGGTTA+AGG | 0.408809 | 2.4:-14760506 | MS.gene94633:intron |
| CCTTTGTATGTGCAGCCAAT+TGG | 0.410331 | 2.4:-14758429 | MS.gene94633:intron |
| AGATCTCCTTGGTGATCTGT+TGG | 0.410955 | 2.4:-14759105 | MS.gene94633:CDS |
| ATACAAGTTTGGTAACGATA+TGG | 0.413903 | 2.4:-14757855 | MS.gene94633:intron |
| CGAGCTTTAGCTGCAGCATA+AGG | 0.419758 | 2.4:+14760550 | None:intergenic |
| TGATTCTGCAGTTCAGGGTC+TGG | 0.425990 | 2.4:+14759874 | None:intergenic |
| ATAGAACACCACTATCCTTC+AGG | 0.428488 | 2.4:+14758376 | None:intergenic |
| TTCCCATCAATATCCTTTGT+AGG | 0.431716 | 2.4:+14763027 | None:intergenic |
| AACAGATCACCAAGGAGATC+TGG | 0.432105 | 2.4:+14759107 | None:intergenic |
| CCAGTGCTTAGCATTGACTA+TGG | 0.432210 | 2.4:-14764644 | MS.gene94633:intron |
| CCAAAGTACCTGCACAGAAC+TGG | 0.434890 | 2.4:+14758965 | None:intergenic |
| AGCAACCGTCATTCGAAGTT+GGG | 0.436731 | 2.4:+14756425 | None:intergenic |
| CAGGAAGTGATCTCCATTGC+GGG | 0.439826 | 2.4:+14757325 | None:intergenic |
| CCTGGATTTGAGCTTGGCTG+AGG | 0.441057 | 2.4:+14759041 | None:intergenic |
| ATGAATTACCATGAAAGATC+TGG | 0.441282 | 2.4:+14761412 | None:intergenic |
| CGAACCAACACGAGGCATAT+TGG | 0.442224 | 2.4:-14763451 | MS.gene94633:CDS |
| CTTTCAGCAATATTTCCAAT+TGG | 0.443048 | 2.4:+14758414 | None:intergenic |
| GATCTCCTTGGTGATCTGTT+GGG | 0.443870 | 2.4:-14759104 | MS.gene94633:CDS |
| TTCGAATGACGGTTGCTTCA+GGG | 0.444111 | 2.4:-14756419 | MS.gene94633:CDS |
| CAGGTTAGTGCATATTTACT+GGG | 0.445140 | 2.4:-14760126 | MS.gene94633:CDS |
| ACCATTGTCTCATGTATGGC+AGG | 0.445928 | 2.4:+14760511 | None:intergenic |
| AAAGATTATCCCAGGAAAAT+GGG | 0.447176 | 2.4:-14759163 | MS.gene94633:CDS |
| GGTGGTATACGAGATGCTAT+AGG | 0.447280 | 2.4:+14756256 | None:intergenic |
| ACAGACCAAAGTCATGCTAA+TGG | 0.451070 | 2.4:-14759404 | MS.gene94633:CDS |
| TCTGGTATTTGGATCTTCAA+TGG | 0.451228 | 2.4:+14763145 | None:intergenic |
| GAATGATCCTGGGGCAGCGC+TGG | 0.453568 | 2.4:-14756170 | MS.gene94633:CDS |
| AGCCATAGTCCCTGTTGGGC+AGG | 0.454919 | 2.4:-14758991 | MS.gene94633:CDS |
| CTTCCACAACTTACAAGTCC+TGG | 0.457055 | 2.4:+14757051 | None:intergenic |
| GCCCGGGGAGGTATAGTATC+TGG | 0.457984 | 2.4:+14758028 | None:intergenic |
| AAGATCTGGTGCAAACTTCT+CGG | 0.458969 | 2.4:+14761426 | None:intergenic |
| ATATCTGATTCTGCAGTTCA+GGG | 0.460765 | 2.4:+14759869 | None:intergenic |
| GGCATCGGCGATGGCGATGT+CGG | 0.460886 | 2.4:-14768711 | None:intergenic |
| AACCACATTACTGCTCATGC+TGG | 0.461557 | 2.4:+14759334 | None:intergenic |
| GCCTAAATTCCCGGAACGAC+AGG | 0.461629 | 2.4:-14759637 | MS.gene94633:intron |
| TGAAGCTTCAAAGGTGGTCC+AGG | 0.463495 | 2.4:+14757306 | None:intergenic |
| AATGCATCTTGATGCTGAAA+AGG | 0.465109 | 2.4:-14762414 | MS.gene94633:CDS |
| ACCAGCAACTTCTGTACATC+AGG | 0.465889 | 2.4:+14763824 | None:intergenic |
| AAACTTTAGAGCGGCTTGCC+AGG | 0.467888 | 2.4:-14763406 | MS.gene94633:CDS |
| TACCAGAAGATCATTGTTTG+AGG | 0.469341 | 2.4:-14763129 | MS.gene94633:intron |
| GGTCCTACAAAGGATATTGA+TGG | 0.471196 | 2.4:-14763030 | MS.gene94633:CDS |
| TACAAGGGCAATGCTTTGTC+TGG | 0.471268 | 2.4:-14756882 | MS.gene94633:intron |
| GCACTAGCTGGTTGAGCCAC+CGG | 0.471601 | 2.4:+14756211 | None:intergenic |
| AGAGCAGCCAGCGCTGCCCC+AGG | 0.472081 | 2.4:+14756163 | None:intergenic |
| TATGTTTGCTGCGACTGTAC+AGG | 0.472612 | 2.4:-14763684 | MS.gene94633:CDS |
| CTTAACCATTGTCTCATGTA+TGG | 0.474043 | 2.4:+14760507 | None:intergenic |
| CCGTCTACATTGACAACATC+AGG | 0.474437 | 2.4:+14763655 | None:intergenic |
| AGAAATTTATTTAATACAGC+TGG | 0.475323 | 2.4:+14757381 | None:intergenic |
| GGTATCTACTTCAGTATCTT+CGG | 0.475537 | 2.4:+14759493 | None:intergenic |
| CTGGATTTGAGCTTGGCTGA+GGG | 0.477291 | 2.4:+14759042 | None:intergenic |
| AAAGCATGAACAGATATAAG+AGG | 0.477658 | 2.4:+14758094 | None:intergenic |
| AAGCAACCGTCATTCGAAGT+TGG | 0.482762 | 2.4:+14756424 | None:intergenic |
| ATGCTTTACATATACATGCT+TGG | 0.482767 | 2.4:-14765003 | MS.gene94633:CDS |
| CTGCAGCATTGAATGATCCT+GGG | 0.487009 | 2.4:-14756180 | MS.gene94633:CDS |
| TCACTAATTTGCACCCAAGC+AGG | 0.487252 | 2.4:-14757901 | MS.gene94633:CDS |
| CATAGTAAGTGTATTCTTGT+GGG | 0.490174 | 2.4:+14763372 | None:intergenic |
| GAATATGACTAGAATGTTGA+TGG | 0.490317 | 2.4:-14762084 | MS.gene94633:CDS |
| AAACCACGACTTTCTCAGAT+TGG | 0.491745 | 2.4:-14764713 | MS.gene94633:CDS |
| TCATTCAATGCTGCAGGAGG+AGG | 0.491879 | 2.4:+14756187 | None:intergenic |
| GTCCTGGGCAAACTATCAAA+TGG | 0.493076 | 2.4:+14757067 | None:intergenic |
| AACACAGGTCACCTGATGTC+AGG | 0.493285 | 2.4:+14761999 | None:intergenic |
| GCCATTTCAAGTAGTGGAAG+TGG | 0.494561 | 2.4:+14757108 | None:intergenic |
| TAACGGCAACATCCCTGCTT+GGG | 0.494768 | 2.4:+14757888 | None:intergenic |
| GAGCTCCATTAGCATGACTT+TGG | 0.495976 | 2.4:+14759399 | None:intergenic |
| GCTCCTCCAGCTGTCGGTGT+CGG | 0.496044 | 2.4:-14759380 | MS.gene94633:CDS |
| TACATCAGGTGCTAAGGACT+CGG | 0.496621 | 2.4:+14763838 | None:intergenic |
| TGCAAATTAGTGATCTCAAG+TGG | 0.496647 | 2.4:+14757911 | None:intergenic |
| TGAGGGTGGACACTGCTACT+AGG | 0.497135 | 2.4:+14759059 | None:intergenic |
| GAAGTTGGGTTCTGTCTGCT+GGG | 0.499813 | 2.4:+14756439 | None:intergenic |
| CCAGGATCATTCAATGCTGC+AGG | 0.500446 | 2.4:+14756181 | None:intergenic |
| AAACCTGAAGCCAGGGAGAT+GGG | 0.501428 | 2.4:+14763345 | None:intergenic |
| CCACAGCCATAGTCCCTGTT+GGG | 0.503085 | 2.4:-14758995 | MS.gene94633:CDS |
| ACAGAAGAATAGAGATAGTA+GGG | 0.503136 | 2.4:+14759932 | None:intergenic |
| ACCTTCTGGGGAGACGACCT+GGG | 0.507993 | 2.4:-14760092 | MS.gene94633:CDS |
| ACCTGATGTACAGAAGTTGC+TGG | 0.509558 | 2.4:-14763825 | MS.gene94633:intron |
| AAATTTACAAACCTGAAGCC+AGG | 0.510147 | 2.4:+14763337 | None:intergenic |
| TCTCAATGTGTGGCTCTACT+TGG | 0.511871 | 2.4:-14762383 | MS.gene94633:CDS |
| CTTCAATGAGGTAATAATCT+GGG | 0.512548 | 2.4:+14762025 | None:intergenic |
| GGATAGTGGTGTTCTATATG+AGG | 0.512656 | 2.4:-14758370 | MS.gene94633:CDS |
| ACCTTTGAAGCTTCAAGAAG+TGG | 0.513281 | 2.4:-14757298 | MS.gene94633:intron |
| CATACTCAAATGTTAGAGTT+GGG | 0.515152 | 2.4:+14756394 | None:intergenic |
| TACAAACAACGAAGACCTAC+AGG | 0.516221 | 2.4:-14760651 | MS.gene94633:intron |
| AATTTATTCTCACTTGTGCC+CGG | 0.517787 | 2.4:+14758011 | None:intergenic |
| GCCACAGCCATAGTCCCTGT+TGG | 0.518024 | 2.4:-14758996 | MS.gene94633:CDS |
| GATTTGAGCTTGGCTGAGGG+TGG | 0.522869 | 2.4:+14759045 | None:intergenic |
| GTATTTGGATCTTCAATGGT+AGG | 0.523622 | 2.4:+14763149 | None:intergenic |
| GCAGGAGGCCAGTTCTGTGC+AGG | 0.523735 | 2.4:-14758973 | MS.gene94633:intron |
| AGTTGGCCGACACCGACAGC+TGG | 0.524980 | 2.4:+14759374 | None:intergenic |
| GCAGGAGGAGGAGCACTAGC+TGG | 0.525217 | 2.4:+14756199 | None:intergenic |
| ACATACTCAAATGTTAGAGT+TGG | 0.525645 | 2.4:+14756393 | None:intergenic |
| CATTGAAGGATCCTGACATC+AGG | 0.526690 | 2.4:-14762010 | MS.gene94633:intron |
| AGCTCAAATCCAGGAACGGA+AGG | 0.527797 | 2.4:-14759032 | MS.gene94633:CDS |
| AGCAGAACAAAGATTATCCC+AGG | 0.529144 | 2.4:-14759171 | MS.gene94633:CDS |
| TTCTGCAGTTCAGGGTCTGG+TGG | 0.529779 | 2.4:+14759877 | None:intergenic |
| GATAACGAATATTTGGTTCA+CGG | 0.530083 | 2.4:+14762345 | None:intergenic |
| ATTTATTCTCACTTGTGCCC+GGG | 0.530758 | 2.4:+14758012 | None:intergenic |
| GGGAATTTGGACACCTTCTG+GGG | 0.531230 | 2.4:-14760104 | MS.gene94633:CDS |
| ACATGCAGCTCCGATGTCTC+CGG | 0.532487 | 2.4:-14756230 | MS.gene94633:CDS |
| TTGTAGGTTGGAAATATTGG+TGG | 0.532507 | 2.4:-14763872 | MS.gene94633:intron |
| ATAACGGCAACATCCCTGCT+TGG | 0.532774 | 2.4:+14757887 | None:intergenic |
| CCATAGTCAATGCTAAGCAC+TGG | 0.533070 | 2.4:+14764644 | None:intergenic |
| ACCACTTCTTGAAGCTTCAA+AGG | 0.535171 | 2.4:+14757297 | None:intergenic |
| CAACCCTCTCCAGATCTCCT+TGG | 0.535643 | 2.4:-14759116 | MS.gene94633:CDS |
| AAAATGTTGTACTTGCTACA+AGG | 0.536342 | 2.4:+14756915 | None:intergenic |
| CAAACCTGAAGCCAGGGAGA+TGG | 0.536647 | 2.4:+14763344 | None:intergenic |
| AAGTTTGCCATTTCAAGTAG+TGG | 0.537438 | 2.4:+14757102 | None:intergenic |
| CTTGTATGAGAAGTCAATAA+CGG | 0.542137 | 2.4:+14757871 | None:intergenic |
| ACCCAGGTCGTCTCCCCAGA+AGG | 0.543274 | 2.4:+14760091 | None:intergenic |
| TGAACTGCAGAATCAGATAT+GGG | 0.543941 | 2.4:-14759866 | MS.gene94633:CDS |
| GCATCTTTACAAGACTAAGT+TGG | 0.546359 | 2.4:+14759357 | None:intergenic |
| TATCGTTGAAGAACTACTGC+AGG | 0.548939 | 2.4:-14761665 | MS.gene94633:intron |
| CCCAACAGGGACTATGGCTG+TGG | 0.549964 | 2.4:+14758995 | None:intergenic |
| TTCCACAACTTACAAGTCCT+GGG | 0.550141 | 2.4:+14757052 | None:intergenic |
| ATTTCAGGCTTTGTGCCTGA+AGG | 0.550961 | 2.4:-14758391 | MS.gene94633:CDS |
| CATAGTCCCTGTTGGGCAGG+AGG | 0.551043 | 2.4:-14758988 | MS.gene94633:CDS |
| CACTAATTTGCACCCAAGCA+GGG | 0.551136 | 2.4:-14757900 | MS.gene94633:CDS |
| GGTTGAGCCACCGGAGACAT+CGG | 0.552118 | 2.4:+14756220 | None:intergenic |
| CCATAGTAAGTGTATTCTTG+TGG | 0.552450 | 2.4:+14763371 | None:intergenic |
| TCAGCCTATAACTATATCTC+CGG | 0.553083 | 2.4:-14757358 | MS.gene94633:CDS |
| TCGAATGACGGTTGCTTCAG+GGG | 0.554125 | 2.4:-14756418 | MS.gene94633:CDS |
| CAGGCTGAAGGAATTCATCA+AGG | 0.555433 | 2.4:-14756296 | MS.gene94633:CDS |
| AATTTGAAGGGCGGATCGAA+TGG | 0.558155 | 2.4:-14763543 | MS.gene94633:intron |
| TACCAGATACTATACCTCCC+CGG | 0.559360 | 2.4:-14758030 | MS.gene94633:CDS |
| CTTCTGTACATCAGGTGCTA+AGG | 0.559872 | 2.4:+14763832 | None:intergenic |
| ACCACATTACTGCTCATGCT+GGG | 0.560664 | 2.4:+14759335 | None:intergenic |
| GTGGTATACGAGATGCTATA+GGG | 0.561357 | 2.4:+14756257 | None:intergenic |
| CCTCAGCCAAGCTCAAATCC+AGG | 0.564745 | 2.4:-14759041 | MS.gene94633:CDS |
| GACATCGGAGCTGCATGTGT+CGG | 0.566157 | 2.4:+14756235 | None:intergenic |
| GCTTTGTGCCTGAAGGATAG+TGG | 0.567415 | 2.4:-14758384 | MS.gene94633:CDS |
| TTCCATTTGATAGTTTGCCC+AGG | 0.570515 | 2.4:-14757069 | MS.gene94633:CDS |
| TTTATTCTCACTTGTGCCCG+GGG | 0.571404 | 2.4:+14758013 | None:intergenic |
| ATGGCGATGTCGGGGATGAG+AGG | 0.571505 | 2.4:-14768701 | MS.gene94633:CDS |
| TCAATTAATTGACAAGGCTG+GGG | 0.578968 | 2.4:-14760717 | MS.gene94633:CDS |
| ACCAGATACTATACCTCCCC+GGG | 0.579338 | 2.4:-14758029 | MS.gene94633:CDS |
| AATGGAGCTCCTCCAGCTGT+CGG | 0.580537 | 2.4:-14759386 | MS.gene94633:CDS |
| TGCAGCTCCGATGTCTCCGG+TGG | 0.582940 | 2.4:-14756227 | MS.gene94633:CDS |
| ACCGTGCGTAATGATATCAT+TGG | 0.583293 | 2.4:-14764682 | MS.gene94633:CDS |
| AGATTGGCATTAAAGCAGAA+TGG | 0.587876 | 2.4:-14758168 | MS.gene94633:CDS |
| GCAGAATGGAGAGCTCATCA+AGG | 0.589226 | 2.4:-14758154 | MS.gene94633:CDS |
| GCAATTAACATACCAGAGCA+AGG | 0.592756 | 2.4:+14762946 | None:intergenic |
| GATTCTCCTTACGATACAGT+AGG | 0.593256 | 2.4:+14760027 | None:intergenic |
| AACTCCAATATGCCTCGTGT+TGG | 0.596123 | 2.4:+14763447 | None:intergenic |
| ATTTATTTAATACAGCTGGT+AGG | 0.596617 | 2.4:+14757385 | None:intergenic |
| AATTTACAAACCTGAAGCCA+GGG | 0.600254 | 2.4:+14763338 | None:intergenic |
| GTCCTACAAAGGATATTGAT+GGG | 0.600269 | 2.4:-14763029 | MS.gene94633:CDS |
| ACTATGGTATCCCATCTCCC+TGG | 0.603268 | 2.4:-14763355 | MS.gene94633:CDS |
| GCCAAGCTCAAATCCAGGAA+CGG | 0.604915 | 2.4:-14759036 | MS.gene94633:CDS |
| ATCGGAGCTGCATGTGTCGG+TGG | 0.606133 | 2.4:+14756238 | None:intergenic |
| CTTCGCGTTGATAAAGAACT+CGG | 0.608982 | 2.4:-14768623 | MS.gene94633:CDS |
| AACTGGCCTCCTGCCCAACA+GGG | 0.609721 | 2.4:+14758982 | None:intergenic |
| GGATCATTCAATGCTGCAGG+AGG | 0.611084 | 2.4:+14756184 | None:intergenic |
| CATCGGCGATGGCGATGTCG+GGG | 0.612273 | 2.4:-14768709 | None:intergenic |
| CAGAACCCAACTTCGAATGA+CGG | 0.613866 | 2.4:-14756430 | MS.gene94633:CDS |
| CCTGATGTTGTCAATGTAGA+CGG | 0.614323 | 2.4:-14763655 | MS.gene94633:CDS |
| CAGAATGGAGAGCTCATCAA+GGG | 0.618983 | 2.4:-14758153 | MS.gene94633:CDS |
| TGCAGCATTGAATGATCCTG+GGG | 0.619309 | 2.4:-14756179 | MS.gene94633:CDS |
| AATTATTTCAGGTCCTACAA+AGG | 0.622233 | 2.4:-14763040 | MS.gene94633:intron |
| CTTAATGGCACTTTGCTCTG+CGG | 0.623434 | 2.4:+14759472 | None:intergenic |
| ACCAATGATATCATTACGCA+CGG | 0.623781 | 2.4:+14764681 | None:intergenic |
| GGGTGGACACTGCTACTAGG+AGG | 0.624196 | 2.4:+14759062 | None:intergenic |
| ATTCTCACTTGTGCCCGGGG+AGG | 0.625876 | 2.4:+14758016 | None:intergenic |
| TGGCCGACACCGACAGCTGG+AGG | 0.626071 | 2.4:+14759377 | None:intergenic |
| TGGCCAATCTGAGAAAGTCG+TGG | 0.632311 | 2.4:+14764710 | None:intergenic |
| GCCCAGCATGAGCAGTAATG+TGG | 0.632821 | 2.4:-14759336 | MS.gene94633:intron |
| GATTCTTCAATTAATTGACA+AGG | 0.636303 | 2.4:-14760723 | MS.gene94633:CDS |
| CAATTAACATACCAGAGCAA+GGG | 0.637125 | 2.4:+14762947 | None:intergenic |
| GTGTGATGTTACAAATGCAA+AGG | 0.638255 | 2.4:-14761689 | MS.gene94633:CDS |
| ATCACCAAGGAGATCTGGAG+AGG | 0.640223 | 2.4:+14759112 | None:intergenic |
| GCTCAAATCCAGGAACGGAA+GGG | 0.640232 | 2.4:-14759031 | MS.gene94633:CDS |
| ACCTGCCATACATGAGACAA+TGG | 0.641283 | 2.4:-14760512 | MS.gene94633:CDS |
| GCAAATTAGTGATCTCAAGT+GGG | 0.642272 | 2.4:+14757912 | None:intergenic |
| GGTGGACACTGCTACTAGGA+GGG | 0.646190 | 2.4:+14759063 | None:intergenic |
| ACTTCTTGAAGCTTCAAAGG+TGG | 0.646434 | 2.4:+14757300 | None:intergenic |
| CCAGGAAGTGATCTCCATTG+CGG | 0.647561 | 2.4:+14757324 | None:intergenic |
| ATACATGCTTGGCTATGATG+TGG | 0.649664 | 2.4:-14764992 | MS.gene94633:CDS |
| AGTCAATGCTAAGCACTGGA+AGG | 0.653021 | 2.4:+14764648 | None:intergenic |
| GGAGGGCCTTCAATAGCCAA+AGG | 0.658035 | 2.4:+14759080 | None:intergenic |
| TCACCAAGGAGATCTGGAGA+GGG | 0.660592 | 2.4:+14759113 | None:intergenic |
| AGGTTAGTGCATATTTACTG+GGG | 0.664751 | 2.4:-14760125 | MS.gene94633:CDS |
| GCGTATGTCGCTTATAAACA+CGG | 0.665564 | 2.4:+14768673 | None:intergenic |
| GGTTAGTGCATATTTACTGG+GGG | 0.671834 | 2.4:-14760124 | MS.gene94633:CDS |
| AGTGTGTCAAAACTTTAGAG+CGG | 0.673028 | 2.4:-14763415 | MS.gene94633:CDS |
| ATGTTGTCAATGTAGACGGA+TGG | 0.678425 | 2.4:-14763651 | MS.gene94633:intron |
| CAGTCGCAGCAAACATAACG+CGG | 0.679680 | 2.4:+14763690 | None:intergenic |
| TTGATATACACAGTATTCGG+AGG | 0.684423 | 2.4:-14761738 | MS.gene94633:intron |
| TAGAAGATGTCAAAACACCA+AGG | 0.704685 | 2.4:+14763498 | None:intergenic |
| GATGTCAGGATCCTTCAATG+AGG | 0.717417 | 2.4:+14762013 | None:intergenic |
| ATTAGTATCGAACCAACACG+AGG | 0.717631 | 2.4:-14763459 | MS.gene94633:CDS |
| GGAGATGATGTCTCAATGTG+TGG | 0.724916 | 2.4:-14762393 | MS.gene94633:CDS |
| AAGGACCCAACAGATCACCA+AGG | 0.745219 | 2.4:+14759099 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 14756156 | 14768723 | 14756156 | ID=MS.gene94633 |
| chr2.4 | mRNA | 14756156 | 14768723 | 14756156 | ID=MS.gene94633.t1;Parent=MS.gene94633 |
| chr2.4 | exon | 14768592 | 14768723 | 14768592 | ID=MS.gene94633.t1.exon1;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14768592 | 14768723 | 14768592 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14764933 | 14765064 | 14764933 | ID=MS.gene94633.t1.exon2;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14764933 | 14765064 | 14764933 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14764645 | 14764770 | 14764645 | ID=MS.gene94633.t1.exon3;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14764645 | 14764770 | 14764645 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14763826 | 14763888 | 14763826 | ID=MS.gene94633.t1.exon4;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14763826 | 14763888 | 14763826 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14763652 | 14763749 | 14763652 | ID=MS.gene94633.t1.exon5;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14763652 | 14763749 | 14763652 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14763349 | 14763556 | 14763349 | ID=MS.gene94633.t1.exon6;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14763349 | 14763556 | 14763349 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14763130 | 14763201 | 14763130 | ID=MS.gene94633.t1.exon7;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14763130 | 14763201 | 14763130 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14762959 | 14763051 | 14762959 | ID=MS.gene94633.t1.exon8;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14762959 | 14763051 | 14762959 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14762337 | 14762438 | 14762337 | ID=MS.gene94633.t1.exon9;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14762337 | 14762438 | 14762337 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14762011 | 14762108 | 14762011 | ID=MS.gene94633.t1.exon10;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14762011 | 14762108 | 14762011 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14761666 | 14761747 | 14761666 | ID=MS.gene94633.t1.exon11;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14761666 | 14761747 | 14761666 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14761421 | 14761509 | 14761421 | ID=MS.gene94633.t1.exon12;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14761421 | 14761509 | 14761421 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14760652 | 14760757 | 14760652 | ID=MS.gene94633.t1.exon13;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14760652 | 14760757 | 14760652 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14760507 | 14760572 | 14760507 | ID=MS.gene94633.t1.exon14;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14760507 | 14760572 | 14760507 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14760039 | 14760145 | 14760039 | ID=MS.gene94633.t1.exon15;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14760039 | 14760145 | 14760039 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14759853 | 14759957 | 14759853 | ID=MS.gene94633.t1.exon16;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14759853 | 14759957 | 14759853 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14759638 | 14759758 | 14759638 | ID=MS.gene94633.t1.exon17;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14759638 | 14759758 | 14759638 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14759337 | 14759534 | 14759337 | ID=MS.gene94633.t1.exon18;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14759337 | 14759534 | 14759337 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14758974 | 14759204 | 14758974 | ID=MS.gene94633.t1.exon19;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14758974 | 14759204 | 14758974 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14758356 | 14758436 | 14758356 | ID=MS.gene94633.t1.exon20;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14758356 | 14758436 | 14758356 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14758024 | 14758188 | 14758024 | ID=MS.gene94633.t1.exon21;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14758024 | 14758188 | 14758024 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14757856 | 14757942 | 14757856 | ID=MS.gene94633.t1.exon22;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14757856 | 14757942 | 14757856 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14757299 | 14757424 | 14757299 | ID=MS.gene94633.t1.exon23;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14757299 | 14757424 | 14757299 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14757065 | 14757145 | 14757065 | ID=MS.gene94633.t1.exon24;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14757065 | 14757145 | 14757065 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14756883 | 14756954 | 14756883 | ID=MS.gene94633.t1.exon25;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14756883 | 14756954 | 14756883 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14756399 | 14756478 | 14756399 | ID=MS.gene94633.t1.exon26;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14756399 | 14756478 | 14756399 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| chr2.4 | exon | 14756156 | 14756315 | 14756156 | ID=MS.gene94633.t1.exon27;Parent=MS.gene94633.t1 |
| chr2.4 | CDS | 14756156 | 14756315 | 14756156 | ID=cds.MS.gene94633.t1;Parent=MS.gene94633.t1 |
| Gene Sequence |
| Protein sequence |