Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94828.t1 | XP_013468422.1 | 95.3 | 616 | 27 | 2 | 1 | 615 | 1 | 615 | 0.00E+00 | 1184.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94828.t1 | Q7XJ98 | 72.6 | 621 | 153 | 7 | 1 | 613 | 5 | 616 | 4.4e-261 | 901.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94828.t1 | A0A072VKC5 | 95.3 | 616 | 27 | 2 | 1 | 615 | 1 | 615 | 0.0e+00 | 1184.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene94828 | 0.833218 | 6.05E-56 | -1.69E-46 |
| MS.gene049281 | MS.gene94828 | 0.800764 | 1.24E-48 | -1.69E-46 |
| MS.gene050894 | MS.gene94828 | 0.834732 | 2.53E-56 | -1.69E-46 |
| MS.gene060076 | MS.gene94828 | 0.80554 | 1.27E-49 | -1.69E-46 |
| MS.gene060077 | MS.gene94828 | 0.839274 | 1.75E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94828.t1 | MTR_1g069460 | 96.916 | 616 | 17 | 2 | 1 | 615 | 1 | 615 | 0.0 | 1239 |
| MS.gene94828.t1 | MTR_7g098650 | 76.105 | 611 | 70 | 6 | 3 | 612 | 1 | 536 | 0.0 | 941 |
| MS.gene94828.t1 | MTR_4g129930 | 56.250 | 400 | 170 | 3 | 152 | 547 | 69 | 467 | 4.21e-170 | 493 |
| MS.gene94828.t1 | MTR_3g084400 | 52.358 | 424 | 194 | 4 | 151 | 567 | 61 | 483 | 3.84e-168 | 488 |
| MS.gene94828.t1 | MTR_5g055350 | 53.349 | 418 | 179 | 5 | 140 | 546 | 35 | 447 | 8.84e-162 | 471 |
| MS.gene94828.t1 | MTR_5g095940 | 53.102 | 403 | 183 | 3 | 152 | 548 | 92 | 494 | 7.55e-154 | 452 |
| MS.gene94828.t1 | MTR_3g007840 | 50.370 | 405 | 168 | 5 | 152 | 548 | 20 | 399 | 4.90e-140 | 414 |
| MS.gene94828.t1 | MTR_5g095950 | 45.921 | 429 | 192 | 6 | 152 | 572 | 65 | 461 | 1.40e-130 | 392 |
| MS.gene94828.t1 | MTR_1g035730 | 45.026 | 382 | 201 | 3 | 159 | 538 | 77 | 451 | 1.63e-114 | 350 |
| MS.gene94828.t1 | MTR_5g010370 | 40.988 | 405 | 224 | 7 | 147 | 545 | 151 | 546 | 5.61e-110 | 341 |
| MS.gene94828.t1 | MTR_1g102430 | 43.073 | 397 | 214 | 7 | 151 | 540 | 97 | 488 | 4.57e-106 | 329 |
| MS.gene94828.t1 | MTR_5g010350 | 41.728 | 405 | 221 | 7 | 147 | 545 | 127 | 522 | 1.91e-104 | 326 |
| MS.gene94828.t1 | MTR_4g119810 | 36.552 | 435 | 239 | 10 | 128 | 541 | 26 | 444 | 2.31e-84 | 271 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94828.t1 | AT2G20370 | 73.194 | 623 | 146 | 8 | 1 | 613 | 5 | 616 | 0.0 | 922 |
| MS.gene94828.t1 | AT2G29040 | 56.444 | 450 | 183 | 6 | 144 | 587 | 288 | 730 | 0.0 | 543 |
| MS.gene94828.t1 | AT4G13990 | 50.957 | 418 | 200 | 4 | 154 | 567 | 95 | 511 | 6.50e-161 | 471 |
| MS.gene94828.t1 | AT4G13990 | 50.957 | 418 | 200 | 4 | 154 | 567 | 95 | 511 | 6.50e-161 | 471 |
| MS.gene94828.t1 | AT2G32750 | 49.761 | 418 | 202 | 4 | 141 | 552 | 72 | 487 | 2.83e-158 | 464 |
| MS.gene94828.t1 | AT2G32750 | 49.761 | 418 | 202 | 4 | 141 | 552 | 70 | 485 | 3.75e-158 | 464 |
| MS.gene94828.t1 | AT2G32740 | 46.602 | 412 | 209 | 6 | 143 | 545 | 55 | 464 | 4.51e-142 | 421 |
| MS.gene94828.t1 | AT2G31990 | 50.000 | 406 | 192 | 7 | 152 | 547 | 78 | 482 | 1.65e-141 | 420 |
| MS.gene94828.t1 | AT2G31990 | 50.000 | 406 | 192 | 7 | 152 | 547 | 70 | 474 | 1.66e-141 | 420 |
| MS.gene94828.t1 | AT2G31990 | 50.000 | 406 | 192 | 7 | 152 | 547 | 116 | 520 | 6.99e-141 | 420 |
| MS.gene94828.t1 | AT1G68470 | 45.812 | 382 | 193 | 6 | 159 | 537 | 73 | 443 | 2.64e-113 | 347 |
| MS.gene94828.t1 | AT5G62220 | 43.719 | 398 | 216 | 5 | 154 | 546 | 118 | 512 | 5.44e-111 | 343 |
| MS.gene94828.t1 | AT5G41250 | 40.201 | 398 | 222 | 7 | 149 | 542 | 172 | 557 | 1.61e-107 | 335 |
| MS.gene94828.t1 | AT1G63450 | 40.842 | 404 | 223 | 8 | 144 | 541 | 267 | 660 | 2.14e-107 | 338 |
| MS.gene94828.t1 | AT4G22580 | 36.409 | 401 | 236 | 8 | 154 | 541 | 37 | 431 | 2.53e-80 | 260 |
Find 149 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATTGCACGTTATCTT+TGG | 0.193030 | 1.4:+56023574 | MS.gene94828:CDS |
| CCGTGGAATGCAAATGATTT+TGG | 0.193783 | 1.4:+56023819 | MS.gene94828:CDS |
| CAACCGCCTCCGAGGAAAAT+TGG | 0.202255 | 1.4:+56023111 | MS.gene94828:CDS |
| AGTGTAAAAGTTTGAGTCTT+TGG | 0.218524 | 1.4:+56023349 | MS.gene94828:CDS |
| CTCCCTGACCAAATGGAAAA+AGG | 0.223737 | 1.4:+56022859 | MS.gene94828:CDS |
| CTCATGATTCTCACTTGTTC+AGG | 0.224742 | 1.4:-56024314 | None:intergenic |
| TGATATTGCACGTTATCTTT+GGG | 0.257423 | 1.4:+56023575 | MS.gene94828:CDS |
| TCCTTCTTCTCCTCCTTCTC+AGG | 0.281758 | 1.4:-56023204 | None:intergenic |
| TTCTCCTCCTTCTCAGGGAC+AGG | 0.298751 | 1.4:-56023198 | None:intergenic |
| GAATACTTGGTATAATTCTT+AGG | 0.301851 | 1.4:-56024221 | None:intergenic |
| TTCTCCGGTTGGTAAGCTTT+TGG | 0.334154 | 1.4:+56024007 | MS.gene94828:CDS |
| AACAGAAACAGGTGTTGATT+TGG | 0.343201 | 1.4:-56023028 | None:intergenic |
| CTCTTTACCGCAACAGGGTC+AGG | 0.348005 | 1.4:-56023168 | None:intergenic |
| GCCTTTGATTCCATGTTGGC+TGG | 0.352901 | 1.4:+56024140 | MS.gene94828:CDS |
| AAGTAGTATTATCAGCTCTA+AGG | 0.355547 | 1.4:-56022972 | None:intergenic |
| TTTACTACCAATGCTGGTCT+TGG | 0.356831 | 1.4:+56023387 | MS.gene94828:CDS |
| GTGTCACTCTTTACCGCAAC+AGG | 0.361158 | 1.4:-56023174 | None:intergenic |
| CTGATTGATTTGGCATTGTC+AGG | 0.361929 | 1.4:-56023957 | None:intergenic |
| GTGTCATTCTTTATCACAAC+AGG | 0.366075 | 1.4:-56023144 | None:intergenic |
| GGATGCTGCTTCGCTTGATC+TGG | 0.366539 | 1.4:+56023617 | MS.gene94828:CDS |
| TTGATGTTATATTTAGCAAT+AGG | 0.366737 | 1.4:+56023478 | MS.gene94828:CDS |
| ACAGTTCTGCTTGCAACCTC+AGG | 0.370804 | 1.4:+56024094 | MS.gene94828:CDS |
| CTGACAATGCCAAATCAATC+AGG | 0.371478 | 1.4:+56023958 | MS.gene94828:CDS |
| CTTCGCTTGATCTGGTTGAC+TGG | 0.394119 | 1.4:+56023625 | MS.gene94828:CDS |
| TTCTTTATCACAACAGGGTC+AGG | 0.396330 | 1.4:-56023138 | None:intergenic |
| TAACTGACCCCTGATTGATT+TGG | 0.399847 | 1.4:-56023967 | None:intergenic |
| CCGCCGCTTGAGAATGTTGA+AGG | 0.412234 | 1.4:+56023411 | MS.gene94828:CDS |
| ATGTGCATGATCTTCCTTCA+AGG | 0.413105 | 1.4:+56023304 | MS.gene94828:CDS |
| TCATCAAAATGAACAGAAAC+AGG | 0.419490 | 1.4:-56023039 | None:intergenic |
| AACCGCCTCCGAGGAAAATT+GGG | 0.428718 | 1.4:+56023112 | MS.gene94828:CDS |
| ATGAGACGGCGCCCTGTGGC+GGG | 0.436273 | 1.4:+56022832 | MS.gene94828:CDS |
| TTGACAAAGTTACACATTTG+AGG | 0.437236 | 1.4:+56024438 | MS.gene94828:CDS |
| CGGCATACACACAGTATACT+TGG | 0.437623 | 1.4:+56024192 | MS.gene94828:CDS |
| ATATCCTCATTAAACCTTGA+AGG | 0.437861 | 1.4:-56023318 | None:intergenic |
| TTTATGAAAGCGTTGAAAAC+CGG | 0.445498 | 1.4:+56023243 | MS.gene94828:CDS |
| CTCTTACGAATGTCGTCCTC+TGG | 0.446305 | 1.4:-56024254 | None:intergenic |
| AATGAGACGGCGCCCTGTGG+CGG | 0.447625 | 1.4:+56022831 | MS.gene94828:CDS |
| ACGAGGTTGGTCCTCATGAA+TGG | 0.447808 | 1.4:+56024543 | MS.gene94828:CDS |
| CCCTGAGAAGGAGGAGAAGA+AGG | 0.450012 | 1.4:+56023203 | MS.gene94828:CDS |
| AAACATCTGCATTATGCTGC+TGG | 0.450155 | 1.4:-56024063 | None:intergenic |
| TGTCTTCTTCCATCCAGGTT+CGG | 0.450428 | 1.4:+56024172 | MS.gene94828:CDS |
| GAGGTTTATCAATTACATCA+TGG | 0.456581 | 1.4:-56023074 | None:intergenic |
| TTACTACCAATGCTGGTCTT+GGG | 0.458270 | 1.4:+56023388 | MS.gene94828:CDS |
| TCTCCTCCTTCTCAGGGACA+GGG | 0.458535 | 1.4:-56023197 | None:intergenic |
| CCTTCTTCTCCTCCTTCTCA+GGG | 0.461076 | 1.4:-56023203 | None:intergenic |
| GGGCGTTCTCCCTGACCAAA+TGG | 0.465316 | 1.4:+56022852 | MS.gene94828:CDS |
| TCAGGGAGAACGCCCGCCAC+AGG | 0.465895 | 1.4:-56022844 | None:intergenic |
| AAAATAAGAGTGATCCTTGT+GGG | 0.471762 | 1.4:+56023268 | MS.gene94828:CDS |
| ATACCTGTCTTCTTCCATCC+AGG | 0.473157 | 1.4:+56024167 | MS.gene94828:CDS |
| AGGTTTATCAATTACATCAT+GGG | 0.478661 | 1.4:-56023073 | None:intergenic |
| GGGTGGAAGTATGTAGGATA+AGG | 0.483181 | 1.4:-56023846 | None:intergenic |
| TGAGGCGATTAGAGAGGAAG+TGG | 0.488880 | 1.4:+56023907 | MS.gene94828:CDS |
| GTCTGCCTTTGATTCCATGT+TGG | 0.489602 | 1.4:+56024136 | MS.gene94828:CDS |
| CGGCGGCCCAAGACCAGCAT+TGG | 0.493353 | 1.4:-56023394 | None:intergenic |
| CAGTTGGAAATATGCTTTGT+TGG | 0.497546 | 1.4:+56024508 | MS.gene94828:CDS |
| GAAATATGCTTTGTTGGATG+AGG | 0.505037 | 1.4:+56024514 | MS.gene94828:CDS |
| TGATTTGGCATTGTCAGGAC+GGG | 0.505393 | 1.4:-56023952 | None:intergenic |
| TACTGTGTGTATGCCGAACC+TGG | 0.505471 | 1.4:-56024185 | None:intergenic |
| CGAGGTTGGTCCTCATGAAT+GGG | 0.505576 | 1.4:+56024544 | MS.gene94828:CDS |
| TGGAATGAAGACAGAATACT+TGG | 0.505827 | 1.4:-56024234 | None:intergenic |
| TGTAAGTTTACTACCAATGC+TGG | 0.507525 | 1.4:+56023381 | MS.gene94828:CDS |
| GTTTAATGAGGATATGTTGA+AGG | 0.509728 | 1.4:+56023326 | MS.gene94828:CDS |
| AAGATGCTGATGTGTTCAAT+TGG | 0.511920 | 1.4:+56023874 | MS.gene94828:CDS |
| CCGGAGTGGAGTATAATGAA+TGG | 0.516300 | 1.4:+56023660 | MS.gene94828:CDS |
| TGTCTGAGGAAGAAACAGAC+TGG | 0.516652 | 1.4:+56023733 | MS.gene94828:CDS |
| TTTGCAGGGTGGAAGTATGT+AGG | 0.517211 | 1.4:-56023852 | None:intergenic |
| GTATGCGACAAATCAGTTTG+CGG | 0.518425 | 1.4:+56023455 | MS.gene94828:CDS |
| TCTTCCTTCAAGGTTTAATG+AGG | 0.519335 | 1.4:+56023314 | MS.gene94828:CDS |
| TGAGCAATGTAGAAGTTCTC+CGG | 0.519680 | 1.4:+56023992 | MS.gene94828:CDS |
| GGGTCAGCATATACTAGTCT+TGG | 0.523979 | 1.4:-56024359 | None:intergenic |
| TGCTGATGTGTTCAATTGGC+AGG | 0.526163 | 1.4:+56023878 | MS.gene94828:CDS |
| ATGAGTATCGAGGAAATACT+TGG | 0.526952 | 1.4:+56024281 | MS.gene94828:CDS |
| ACTTCATTGAGGAGAACAGT+TGG | 0.528023 | 1.4:+56024492 | MS.gene94828:CDS |
| CGGAGTGGAGTATAATGAAT+GGG | 0.528397 | 1.4:+56023661 | MS.gene94828:CDS |
| CAGAGGACGACATTCGTAAG+AGG | 0.529906 | 1.4:+56024255 | MS.gene94828:CDS |
| CGCCGCTTGAGAATGTTGAA+GGG | 0.533893 | 1.4:+56023412 | MS.gene94828:CDS |
| CATTCCAAAAGCTTACCAAC+CGG | 0.535445 | 1.4:-56024011 | None:intergenic |
| GTCTTTAAGAGTTTCTAACT+TGG | 0.540665 | 1.4:-56024387 | None:intergenic |
| ATGGACATATTCTTTGCTGC+CGG | 0.540988 | 1.4:-56023777 | None:intergenic |
| ATATCAAACCCAGCATAAAA+CGG | 0.541005 | 1.4:-56023558 | None:intergenic |
| AAATATGCTTTGTTGGATGA+GGG | 0.541599 | 1.4:+56024515 | MS.gene94828:CDS |
| CAAAGTTACACATTTGAGGA+AGG | 0.543709 | 1.4:+56024442 | MS.gene94828:CDS |
| GTCTGAGGAAGAAACAGACT+GGG | 0.543879 | 1.4:+56023734 | MS.gene94828:CDS |
| CCAAAATCATTTGCATTCCA+CGG | 0.546391 | 1.4:-56023819 | None:intergenic |
| GCCAGCCAACATGGAATCAA+AGG | 0.555175 | 1.4:-56024141 | None:intergenic |
| CTCCTCCTTCTCAGGGACAG+GGG | 0.555383 | 1.4:-56023196 | None:intergenic |
| GATATTGCACGTTATCTTTG+GGG | 0.556924 | 1.4:+56023576 | MS.gene94828:CDS |
| CACCCCTGTCCCTGAGAAGG+AGG | 0.557721 | 1.4:+56023194 | MS.gene94828:CDS |
| TTGATTTGGCATTGTCAGGA+CGG | 0.559182 | 1.4:-56023953 | None:intergenic |
| TTGTTGCGGGGAGGATAACG+TGG | 0.563860 | 1.4:+56023697 | MS.gene94828:CDS |
| AGTGAGAATCATGAGAGAAG+AGG | 0.567837 | 1.4:+56024322 | MS.gene94828:CDS |
| CAGGGAGAACGCCCGCCACA+GGG | 0.568388 | 1.4:-56022843 | None:intergenic |
| TCTTTACCGCAACAGGGTCA+GGG | 0.571861 | 1.4:-56023167 | None:intergenic |
| CAGTTCTGCTTGCAACCTCA+GGG | 0.574443 | 1.4:+56024095 | MS.gene94828:CDS |
| ATGATTCTCACTTGTTCAGG+AGG | 0.576058 | 1.4:-56024311 | None:intergenic |
| AAAGAATATGTCCATGCTTG+TGG | 0.578138 | 1.4:+56023785 | MS.gene94828:CDS |
| GAACCTGGATGGAAGAAGAC+AGG | 0.581328 | 1.4:-56024170 | None:intergenic |
| TGACACCCCTGTCCCTGAGA+AGG | 0.581426 | 1.4:+56023191 | MS.gene94828:CDS |
| AACATCTGCATTATGCTGCT+GGG | 0.583163 | 1.4:-56024062 | None:intergenic |
| TCAATTGGCAGGACAGAATG+AGG | 0.584744 | 1.4:+56023889 | MS.gene94828:CDS |
| AGGTATACAGCCAGCCAACA+TGG | 0.585934 | 1.4:-56024150 | None:intergenic |
| TGACAATGCCAAATCAATCA+GGG | 0.586683 | 1.4:+56023959 | MS.gene94828:CDS |
| GAGTTTCTAACTTGGAGCGA+GGG | 0.588810 | 1.4:-56024379 | None:intergenic |
| ATCATGAGAGAAGAGGTCAT+TGG | 0.590128 | 1.4:+56024329 | MS.gene94828:CDS |
| GTGGAGTATAATGAATGGGA+AGG | 0.593191 | 1.4:+56023665 | MS.gene94828:CDS |
| GGGTTATAATATCTCGAGGA+GGG | 0.593478 | 1.4:+56023596 | MS.gene94828:CDS |
| GGCTTATGAAGAGGCCGGAG+TGG | 0.594655 | 1.4:+56023646 | MS.gene94828:CDS |
| GCCGCTTGAGAATGTTGAAG+GGG | 0.594748 | 1.4:+56023413 | MS.gene94828:CDS |
| AGAGTTTCTAACTTGGAGCG+AGG | 0.604913 | 1.4:-56024380 | None:intergenic |
| GTGTGTATGCCGAACCTGGA+TGG | 0.606530 | 1.4:-56024181 | None:intergenic |
| CCTTCAACATTCTCAAGCGG+CGG | 0.606943 | 1.4:-56023411 | None:intergenic |
| GGTTGCGATGATTTAACTCG+AGG | 0.608916 | 1.4:-56023093 | None:intergenic |
| ACTCGACTCTACCACAAGCA+TGG | 0.610855 | 1.4:-56023796 | None:intergenic |
| TGACTGGCTTATGAAGAGGC+CGG | 0.613272 | 1.4:+56023641 | MS.gene94828:CDS |
| CAATGTAGAAGTTCTCCGGT+TGG | 0.619092 | 1.4:+56023996 | MS.gene94828:CDS |
| CTTTACCGCAACAGGGTCAG+GGG | 0.619249 | 1.4:-56023166 | None:intergenic |
| GTGATCATCAACAAATTGAG+TGG | 0.619603 | 1.4:-56023001 | None:intergenic |
| GATTTGGCATTGTCAGGACG+GGG | 0.620412 | 1.4:-56023951 | None:intergenic |
| TGACACCCCTGACCCTGTTG+CGG | 0.622233 | 1.4:+56023161 | MS.gene94828:CDS |
| TGGTTGACTGGCTTATGAAG+AGG | 0.623329 | 1.4:+56023637 | MS.gene94828:CDS |
| GATGAGGGAAAACACGAGGT+TGG | 0.623860 | 1.4:+56024530 | MS.gene94828:CDS |
| CCATTCATTATACTCCACTC+CGG | 0.623909 | 1.4:-56023660 | None:intergenic |
| AATCATCGCAACCGCCTCCG+AGG | 0.627422 | 1.4:+56023103 | MS.gene94828:CDS |
| ACCCCTTCAACATTCTCAAG+CGG | 0.628618 | 1.4:-56023414 | None:intergenic |
| GTATTCTGTCTTCATTCCAG+AGG | 0.633027 | 1.4:+56024238 | MS.gene94828:CDS |
| ACAGAATGAGGCGATTAGAG+AGG | 0.639158 | 1.4:+56023901 | MS.gene94828:CDS |
| TTTGGGGTTATAATATCTCG+AGG | 0.641133 | 1.4:+56023592 | MS.gene94828:CDS |
| TTGATTGAATGCAAATGAGA+CGG | 0.643214 | 1.4:+56022818 | None:intergenic |
| TGTTGCGGGGAGGATAACGT+GGG | 0.647158 | 1.4:+56023698 | MS.gene94828:CDS |
| AAGAAAGGATCCCATTCATG+AGG | 0.647321 | 1.4:-56024554 | None:intergenic |
| AATAAGAGTGATCCTTGTGG+GGG | 0.649379 | 1.4:+56023270 | MS.gene94828:CDS |
| GGGGTTATAATATCTCGAGG+AGG | 0.650227 | 1.4:+56023595 | MS.gene94828:CDS |
| GAAAATAAGAGTGATCCTTG+TGG | 0.653504 | 1.4:+56023267 | MS.gene94828:CDS |
| AAATAAGAGTGATCCTTGTG+GGG | 0.657313 | 1.4:+56023269 | MS.gene94828:CDS |
| GCAAATGAGACGGCGCCCTG+TGG | 0.665026 | 1.4:+56022828 | MS.gene94828:CDS |
| GACAATGCCAAATCAATCAG+GGG | 0.665818 | 1.4:+56023960 | MS.gene94828:CDS |
| TAAGAGGAACATGAGTATCG+AGG | 0.675462 | 1.4:+56024271 | MS.gene94828:CDS |
| AGGGTGATTCATACACTCGA+AGG | 0.675831 | 1.4:+56024114 | MS.gene94828:CDS |
| TGAGAAGGAGGAGAAGAAGG+AGG | 0.678894 | 1.4:+56023206 | MS.gene94828:CDS |
| AGCTTCAGCAGATGAATCAG+TGG | 0.683333 | 1.4:-56024609 | None:intergenic |
| GTTGGATGAGGGAAAACACG+AGG | 0.683608 | 1.4:+56024526 | MS.gene94828:CDS |
| TGTCACTCTTTACCGCAACA+GGG | 0.687983 | 1.4:-56023173 | None:intergenic |
| TTGTGGTAGAGTCGAGTCCG+TGG | 0.690146 | 1.4:+56023802 | MS.gene94828:CDS |
| TGTCATTCTTTATCACAACA+GGG | 0.695657 | 1.4:-56023143 | None:intergenic |
| CTGAGGAAGAAACAGACTGG+GGG | 0.706384 | 1.4:+56023736 | MS.gene94828:CDS |
| ATAAGAGTGATCCTTGTGGG+GGG | 0.715435 | 1.4:+56023271 | MS.gene94828:CDS |
| TCTGAGGAAGAAACAGACTG+GGG | 0.732806 | 1.4:+56023735 | MS.gene94828:CDS |
| GCAGTATGAGTGCTTGACTG+AGG | 0.734277 | 1.4:+56023506 | MS.gene94828:CDS |
| CGAGTGTATGAATCACCCTG+AGG | 0.742346 | 1.4:-56024110 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTGATAAAAACTTCATTG+AGG | + | chr1.4:56024481-56024500 | MS.gene94828:CDS | 20.0% |
| !! | TTGATGTTATATTTAGCAAT+AGG | + | chr1.4:56023478-56023497 | MS.gene94828:CDS | 20.0% |
| ! | AGGTTTATCAATTACATCAT+GGG | - | chr1.4:56023076-56023095 | None:intergenic | 25.0% |
| ! | GAATACTTGGTATAATTCTT+AGG | - | chr1.4:56024224-56024243 | None:intergenic | 25.0% |
| ! | TTCTCAAAACCAAAAAATGA+TGG | + | chr1.4:56024575-56024594 | MS.gene94828:CDS | 25.0% |
| !!! | TTTTTTGGTTTTGAGAAGAA+AGG | - | chr1.4:56024572-56024591 | None:intergenic | 25.0% |
| AAAATAAGAGTGATCCTTGT+GGG | + | chr1.4:56023268-56023287 | MS.gene94828:CDS | 30.0% | |
| AAACCAAAAAATGATGGTAG+TGG | + | chr1.4:56024581-56024600 | MS.gene94828:CDS | 30.0% | |
| AAGTAGTATTATCAGCTCTA+AGG | - | chr1.4:56022975-56022994 | None:intergenic | 30.0% | |
| AGTGTAAAAGTTTGAGTCTT+TGG | + | chr1.4:56023349-56023368 | MS.gene94828:CDS | 30.0% | |
| ATATCAAACCCAGCATAAAA+CGG | - | chr1.4:56023561-56023580 | None:intergenic | 30.0% | |
| ATATCCTCATTAAACCTTGA+AGG | - | chr1.4:56023321-56023340 | None:intergenic | 30.0% | |
| GAGGTTTATCAATTACATCA+TGG | - | chr1.4:56023077-56023096 | None:intergenic | 30.0% | |
| GTTTAATGAGGATATGTTGA+AGG | + | chr1.4:56023326-56023345 | MS.gene94828:CDS | 30.0% | |
| TCATCAAAATGAACAGAAAC+AGG | - | chr1.4:56023042-56023061 | None:intergenic | 30.0% | |
| TGATATTGCACGTTATCTTT+GGG | + | chr1.4:56023575-56023594 | MS.gene94828:CDS | 30.0% | |
| TGTCATTCTTTATCACAACA+GGG | - | chr1.4:56023146-56023165 | None:intergenic | 30.0% | |
| TTGACAAAGTTACACATTTG+AGG | + | chr1.4:56024438-56024457 | MS.gene94828:CDS | 30.0% | |
| TTGATATTGCACGTTATCTT+TGG | + | chr1.4:56023574-56023593 | MS.gene94828:CDS | 30.0% | |
| ! | AAATATGCTTTGTTGGATGA+GGG | + | chr1.4:56024515-56024534 | MS.gene94828:CDS | 30.0% |
| ! | ATTTTTGTTCCGTTTTATGC+TGG | + | chr1.4:56023549-56023568 | MS.gene94828:CDS | 30.0% |
| ! | CTTCTTTATCAGCTTTTCTA+TGG | + | chr1.4:56022920-56022939 | MS.gene94828:CDS | 30.0% |
| ! | GTCTTTAAGAGTTTCTAACT+TGG | - | chr1.4:56024390-56024409 | None:intergenic | 30.0% |
| ! | GTTTTCAACGCTTTCATAAA+AGG | - | chr1.4:56023243-56023262 | None:intergenic | 30.0% |
| ! | TTTTTGTTCCGTTTTATGCT+GGG | + | chr1.4:56023550-56023569 | MS.gene94828:CDS | 30.0% |
| !! | TTTATGAAAGCGTTGAAAAC+CGG | + | chr1.4:56023243-56023262 | MS.gene94828:CDS | 30.0% |
| !!! | GAATAAGCTTCTGTTTTTAC+CGG | + | chr1.4:56023758-56023777 | MS.gene94828:CDS | 30.0% |
| AAAGAATATGTCCATGCTTG+TGG | + | chr1.4:56023785-56023804 | MS.gene94828:CDS | 35.0% | |
| AAATAAGAGTGATCCTTGTG+GGG | + | chr1.4:56023269-56023288 | MS.gene94828:CDS | 35.0% | |
| AAGATGCTGATGTGTTCAAT+TGG | + | chr1.4:56023874-56023893 | MS.gene94828:CDS | 35.0% | |
| CAAAGTTACACATTTGAGGA+AGG | + | chr1.4:56024442-56024461 | MS.gene94828:CDS | 35.0% | |
| CAGTTGGAAATATGCTTTGT+TGG | + | chr1.4:56024508-56024527 | MS.gene94828:CDS | 35.0% | |
| CCAAAATCATTTGCATTCCA+CGG | - | chr1.4:56023822-56023841 | None:intergenic | 35.0% | |
| CTGAAGCTGCAAAAAATTCT+TGG | + | chr1.4:56024624-56024643 | MS.gene94828:CDS | 35.0% | |
| GAAAATAAGAGTGATCCTTG+TGG | + | chr1.4:56023267-56023286 | MS.gene94828:CDS | 35.0% | |
| GATATTGCACGTTATCTTTG+GGG | + | chr1.4:56023576-56023595 | MS.gene94828:CDS | 35.0% | |
| GTGATCATCAACAAATTGAG+TGG | - | chr1.4:56023004-56023023 | None:intergenic | 35.0% | |
| TCTTCCTTCAAGGTTTAATG+AGG | + | chr1.4:56023314-56023333 | MS.gene94828:CDS | 35.0% | |
| TGACAATGCCAAATCAATCA+GGG | + | chr1.4:56023959-56023978 | MS.gene94828:CDS | 35.0% | |
| TGGAATGAAGACAGAATACT+TGG | - | chr1.4:56024237-56024256 | None:intergenic | 35.0% | |
| TGTAAGTTTACTACCAATGC+TGG | + | chr1.4:56023381-56023400 | MS.gene94828:CDS | 35.0% | |
| ! | AAGGATCATTTTCTTGTTGC+GGG | + | chr1.4:56023684-56023703 | MS.gene94828:CDS | 35.0% |
| ! | GAAATATGCTTTGTTGGATG+AGG | + | chr1.4:56024514-56024533 | MS.gene94828:CDS | 35.0% |
| ! | GAAGGATCATTTTCTTGTTG+CGG | + | chr1.4:56023683-56023702 | MS.gene94828:CDS | 35.0% |
| ! | GTGTCATTCTTTATCACAAC+AGG | - | chr1.4:56023147-56023166 | None:intergenic | 35.0% |
| ! | TTTGGGGTTATAATATCTCG+AGG | + | chr1.4:56023592-56023611 | MS.gene94828:CDS | 35.0% |
| !! | AACAGAAACAGGTGTTGATT+TGG | - | chr1.4:56023031-56023050 | None:intergenic | 35.0% |
| !! | ATGAGTATCGAGGAAATACT+TGG | + | chr1.4:56024281-56024300 | MS.gene94828:CDS | 35.0% |
| !!! | AAGCTTTTGGAATGTGACTT+TGG | + | chr1.4:56024020-56024039 | MS.gene94828:CDS | 35.0% |
| !!! | AGGATCACTCTTATTTTCAC+CGG | - | chr1.4:56023265-56023284 | None:intergenic | 35.0% |
| !!! | TCTCCACTACCATCATTTTT+TGG | - | chr1.4:56024587-56024606 | None:intergenic | 35.0% |
| AAACATCTGCATTATGCTGC+TGG | - | chr1.4:56024066-56024085 | None:intergenic | 40.0% | |
| AACATCTGCATTATGCTGCT+GGG | - | chr1.4:56024065-56024084 | None:intergenic | 40.0% | |
| AAGAAAGGATCCCATTCATG+AGG | - | chr1.4:56024557-56024576 | None:intergenic | 40.0% | |
| AATAAGAGTGATCCTTGTGG+GGG | + | chr1.4:56023270-56023289 | MS.gene94828:CDS | 40.0% | |
| ACTTCATTGAGGAGAACAGT+TGG | + | chr1.4:56024492-56024511 | MS.gene94828:CDS | 40.0% | |
| AGTGAGAATCATGAGAGAAG+AGG | + | chr1.4:56024322-56024341 | MS.gene94828:CDS | 40.0% | |
| ATCATGAGAGAAGAGGTCAT+TGG | + | chr1.4:56024329-56024348 | MS.gene94828:CDS | 40.0% | |
| ATGATTCTCACTTGTTCAGG+AGG | - | chr1.4:56024314-56024333 | None:intergenic | 40.0% | |
| ATGGACATATTCTTTGCTGC+CGG | - | chr1.4:56023780-56023799 | None:intergenic | 40.0% | |
| ATGTGCATGATCTTCCTTCA+AGG | + | chr1.4:56023304-56023323 | MS.gene94828:CDS | 40.0% | |
| CATTCCAAAAGCTTACCAAC+CGG | - | chr1.4:56024014-56024033 | None:intergenic | 40.0% | |
| CCATTCATTATACTCCACTC+CGG | - | chr1.4:56023663-56023682 | None:intergenic | 40.0% | |
| CGGAGTGGAGTATAATGAAT+GGG | + | chr1.4:56023661-56023680 | MS.gene94828:CDS | 40.0% | |
| CTCATGATTCTCACTTGTTC+AGG | - | chr1.4:56024317-56024336 | None:intergenic | 40.0% | |
| CTGACAATGCCAAATCAATC+AGG | + | chr1.4:56023958-56023977 | MS.gene94828:CDS | 40.0% | |
| GACAATGCCAAATCAATCAG+GGG | + | chr1.4:56023960-56023979 | MS.gene94828:CDS | 40.0% | |
| GGGTTATAATATCTCGAGGA+GGG | + | chr1.4:56023596-56023615 | MS.gene94828:CDS | 40.0% | |
| GTATGCGACAAATCAGTTTG+CGG | + | chr1.4:56023455-56023474 | MS.gene94828:CDS | 40.0% | |
| GTATTCTGTCTTCATTCCAG+AGG | + | chr1.4:56024238-56024257 | MS.gene94828:CDS | 40.0% | |
| GTGGAGTATAATGAATGGGA+AGG | + | chr1.4:56023665-56023684 | MS.gene94828:CDS | 40.0% | |
| TAACTGACCCCTGATTGATT+TGG | - | chr1.4:56023970-56023989 | None:intergenic | 40.0% | |
| TCCCTGACCAAATGGAAAAA+GGG | + | chr1.4:56022860-56022879 | MS.gene94828:CDS | 40.0% | |
| TGAGCAATGTAGAAGTTCTC+CGG | + | chr1.4:56023992-56024011 | MS.gene94828:CDS | 40.0% | |
| TTCTTTATCACAACAGGGTC+AGG | - | chr1.4:56023141-56023160 | None:intergenic | 40.0% | |
| ! | AACACATCAGCATCTTTTGC+AGG | - | chr1.4:56023870-56023889 | None:intergenic | 40.0% |
| ! | AAGTGGCTTTTCTCATTTGC+TGG | + | chr1.4:56023924-56023943 | MS.gene94828:CDS | 40.0% |
| ! | ACACATCAGCATCTTTTGCA+GGG | - | chr1.4:56023869-56023888 | None:intergenic | 40.0% |
| ! | AGGATCATTTTCTTGTTGCG+GGG | + | chr1.4:56023685-56023704 | MS.gene94828:CDS | 40.0% |
| ! | CCGTGGAATGCAAATGATTT+TGG | + | chr1.4:56023819-56023838 | MS.gene94828:CDS | 40.0% |
| ! | GAATGTTGAAGGGGTTTTCT+CGG | + | chr1.4:56023422-56023441 | MS.gene94828:CDS | 40.0% |
| ! | TAAGAGGAACATGAGTATCG+AGG | + | chr1.4:56024271-56024290 | MS.gene94828:CDS | 40.0% |
| ! | TCAGGAAACCCAATTTTCCT+CGG | - | chr1.4:56023123-56023142 | None:intergenic | 40.0% |
| ! | TTGATCCCCCTTTTTCCATT+TGG | - | chr1.4:56022870-56022889 | None:intergenic | 40.0% |
| ! | TTTACTACCAATGCTGGTCT+TGG | + | chr1.4:56023387-56023406 | MS.gene94828:CDS | 40.0% |
| !! | CTGATTGATTTGGCATTGTC+AGG | - | chr1.4:56023960-56023979 | None:intergenic | 40.0% |
| !! | TTACTACCAATGCTGGTCTT+GGG | + | chr1.4:56023388-56023407 | MS.gene94828:CDS | 40.0% |
| !! | TTGATTTGGCATTGTCAGGA+CGG | - | chr1.4:56023956-56023975 | None:intergenic | 40.0% |
| ACAGAATGAGGCGATTAGAG+AGG | + | chr1.4:56023901-56023920 | MS.gene94828:CDS | 45.0% | |
| ACCCCTTCAACATTCTCAAG+CGG | - | chr1.4:56023417-56023436 | None:intergenic | 45.0% | |
| AGAGTTTCTAACTTGGAGCG+AGG | - | chr1.4:56024383-56024402 | None:intergenic | 45.0% | |
| AGCTTCAGCAGATGAATCAG+TGG | - | chr1.4:56024612-56024631 | None:intergenic | 45.0% | |
| AGGGTGATTCATACACTCGA+AGG | + | chr1.4:56024114-56024133 | MS.gene94828:CDS | 45.0% | |
| ATAAGAGTGATCCTTGTGGG+GGG | + | chr1.4:56023271-56023290 | MS.gene94828:CDS | 45.0% | |
| ATACCTGTCTTCTTCCATCC+AGG | + | chr1.4:56024167-56024186 | MS.gene94828:CDS | 45.0% | |
| CAATGTAGAAGTTCTCCGGT+TGG | + | chr1.4:56023996-56024015 | MS.gene94828:CDS | 45.0% | |
| CCCTGACCAAATGGAAAAAG+GGG | + | chr1.4:56022861-56022880 | MS.gene94828:CDS | 45.0% | |
| CCGGAGTGGAGTATAATGAA+TGG | + | chr1.4:56023660-56023679 | MS.gene94828:CDS | 45.0% | |
| CCTGACCAAATGGAAAAAGG+GGG | + | chr1.4:56022862-56022881 | MS.gene94828:CDS | 45.0% | |
| CGGCATACACACAGTATACT+TGG | + | chr1.4:56024192-56024211 | MS.gene94828:CDS | 45.0% | |
| CTCCCTGACCAAATGGAAAA+AGG | + | chr1.4:56022859-56022878 | MS.gene94828:CDS | 45.0% | |
| GAGTTTCTAACTTGGAGCGA+GGG | - | chr1.4:56024382-56024401 | None:intergenic | 45.0% | |
| GGGGTTATAATATCTCGAGG+AGG | + | chr1.4:56023595-56023614 | MS.gene94828:CDS | 45.0% | |
| GGTTGCGATGATTTAACTCG+AGG | - | chr1.4:56023096-56023115 | None:intergenic | 45.0% | |
| GTCTGAGGAAGAAACAGACT+GGG | + | chr1.4:56023734-56023753 | MS.gene94828:CDS | 45.0% | |
| GTCTGCCTTTGATTCCATGT+TGG | + | chr1.4:56024136-56024155 | MS.gene94828:CDS | 45.0% | |
| TAAATATACCTCCCCCCACA+AGG | - | chr1.4:56023285-56023304 | None:intergenic | 45.0% | |
| TCAATTGGCAGGACAGAATG+AGG | + | chr1.4:56023889-56023908 | MS.gene94828:CDS | 45.0% | |
| TCTGAGGAAGAAACAGACTG+GGG | + | chr1.4:56023735-56023754 | MS.gene94828:CDS | 45.0% | |
| TGCTGATGTGTTCAATTGGC+AGG | + | chr1.4:56023878-56023897 | MS.gene94828:CDS | 45.0% | |
| TGTCACTCTTTACCGCAACA+GGG | - | chr1.4:56023176-56023195 | None:intergenic | 45.0% | |
| TGTCTGAGGAAGAAACAGAC+TGG | + | chr1.4:56023733-56023752 | MS.gene94828:CDS | 45.0% | |
| TGTCTTCTTCCATCCAGGTT+CGG | + | chr1.4:56024172-56024191 | MS.gene94828:CDS | 45.0% | |
| ! | ATCATTTTCTTGTTGCGGGG+AGG | + | chr1.4:56023688-56023707 | MS.gene94828:CDS | 45.0% |
| ! | CCCCTTTTTCCATTTGGTCA+GGG | - | chr1.4:56022864-56022883 | None:intergenic | 45.0% |
| ! | GGAGGATAACGTGGGATTTT+CGG | + | chr1.4:56023706-56023725 | MS.gene94828:CDS | 45.0% |
| ! | GGATTTTCGGAGATTGTCTG+AGG | + | chr1.4:56023719-56023738 | MS.gene94828:CDS | 45.0% |
| ! | GGGTCAGCATATACTAGTCT+TGG | - | chr1.4:56024362-56024381 | None:intergenic | 45.0% |
| ! | GGGTGGAAGTATGTAGGATA+AGG | - | chr1.4:56023849-56023868 | None:intergenic | 45.0% |
| ! | TGAAGGGGTTTTCTCGGATA+CGG | + | chr1.4:56023428-56023447 | MS.gene94828:CDS | 45.0% |
| ! | TGATTTGGCATTGTCAGGAC+GGG | - | chr1.4:56023955-56023974 | None:intergenic | 45.0% |
| ! | TTTGCAGGGTGGAAGTATGT+AGG | - | chr1.4:56023855-56023874 | None:intergenic | 45.0% |
| !! | TGGTTGACTGGCTTATGAAG+AGG | + | chr1.4:56023637-56023656 | MS.gene94828:CDS | 45.0% |
| !!! | TTCTCCGGTTGGTAAGCTTT+TGG | + | chr1.4:56024007-56024026 | MS.gene94828:CDS | 45.0% |
| AACCGCCTCCGAGGAAAATT+GGG | + | chr1.4:56023112-56023131 | MS.gene94828:CDS | 50.0% | |
| ACAGTTCTGCTTGCAACCTC+AGG | + | chr1.4:56024094-56024113 | MS.gene94828:CDS | 50.0% | |
| ACTCGACTCTACCACAAGCA+TGG | - | chr1.4:56023799-56023818 | None:intergenic | 50.0% | |
| AGGTATACAGCCAGCCAACA+TGG | - | chr1.4:56024153-56024172 | None:intergenic | 50.0% | |
| CAGAGGACGACATTCGTAAG+AGG | + | chr1.4:56024255-56024274 | MS.gene94828:CDS | 50.0% | |
| CAGTTCTGCTTGCAACCTCA+GGG | + | chr1.4:56024095-56024114 | MS.gene94828:CDS | 50.0% | |
| CCTTCAACATTCTCAAGCGG+CGG | - | chr1.4:56023414-56023433 | None:intergenic | 50.0% | |
| CCTTCTTCTCCTCCTTCTCA+GGG | - | chr1.4:56023206-56023225 | None:intergenic | 50.0% | |
| CGAGTGTATGAATCACCCTG+AGG | - | chr1.4:56024113-56024132 | None:intergenic | 50.0% | |
| CGCCGCTTGAGAATGTTGAA+GGG | + | chr1.4:56023412-56023431 | MS.gene94828:CDS | 50.0% | |
| CTCTTACGAATGTCGTCCTC+TGG | - | chr1.4:56024257-56024276 | None:intergenic | 50.0% | |
| CTGAGGAAGAAACAGACTGG+GGG | + | chr1.4:56023736-56023755 | MS.gene94828:CDS | 50.0% | |
| CTTCGCTTGATCTGGTTGAC+TGG | + | chr1.4:56023625-56023644 | MS.gene94828:CDS | 50.0% | |
| GAACCTGGATGGAAGAAGAC+AGG | - | chr1.4:56024173-56024192 | None:intergenic | 50.0% | |
| GATGAGGGAAAACACGAGGT+TGG | + | chr1.4:56024530-56024549 | MS.gene94828:CDS | 50.0% | |
| GATTTGGCATTGTCAGGACG+GGG | - | chr1.4:56023954-56023973 | None:intergenic | 50.0% | |
| GCAGTATGAGTGCTTGACTG+AGG | + | chr1.4:56023506-56023525 | MS.gene94828:CDS | 50.0% | |
| GCCAGCCAACATGGAATCAA+AGG | - | chr1.4:56024144-56024163 | None:intergenic | 50.0% | |
| GCCGCTTGAGAATGTTGAAG+GGG | + | chr1.4:56023413-56023432 | MS.gene94828:CDS | 50.0% | |
| GCCTTTGATTCCATGTTGGC+TGG | + | chr1.4:56024140-56024159 | MS.gene94828:CDS | 50.0% | |
| GTTGGATGAGGGAAAACACG+AGG | + | chr1.4:56024526-56024545 | MS.gene94828:CDS | 50.0% | |
| TACTGTGTGTATGCCGAACC+TGG | - | chr1.4:56024188-56024207 | None:intergenic | 50.0% | |
| TCCTTCTTCTCCTCCTTCTC+AGG | - | chr1.4:56023207-56023226 | None:intergenic | 50.0% | |
| TCTTTACCGCAACAGGGTCA+GGG | - | chr1.4:56023170-56023189 | None:intergenic | 50.0% | |
| TGAGAAGGAGGAGAAGAAGG+AGG | + | chr1.4:56023206-56023225 | MS.gene94828:CDS | 50.0% | |
| TGAGGCGATTAGAGAGGAAG+TGG | + | chr1.4:56023907-56023926 | MS.gene94828:CDS | 50.0% | |
| ! | AACCCAATTTTCCTCGGAGG+CGG | - | chr1.4:56023117-56023136 | None:intergenic | 50.0% |
| ! | ACGAGGTTGGTCCTCATGAA+TGG | + | chr1.4:56024543-56024562 | MS.gene94828:CDS | 50.0% |
| ! | CATCAGCATCTTTTGCAGGG+TGG | - | chr1.4:56023866-56023885 | None:intergenic | 50.0% |
| ! | CCCCCTTTTTCCATTTGGTC+AGG | - | chr1.4:56022865-56022884 | None:intergenic | 50.0% |
| ! | CGAGGTTGGTCCTCATGAAT+GGG | + | chr1.4:56024544-56024563 | MS.gene94828:CDS | 50.0% |
| ! | GAAGGGGTTTTCTCGGATAC+GGG | + | chr1.4:56023429-56023448 | MS.gene94828:CDS | 50.0% |
| ! | GGAAACCCAATTTTCCTCGG+AGG | - | chr1.4:56023120-56023139 | None:intergenic | 50.0% |
| ! | GTGTCACTCTTTACCGCAAC+AGG | - | chr1.4:56023177-56023196 | None:intergenic | 50.0% |
| !! | TGACTGGCTTATGAAGAGGC+CGG | + | chr1.4:56023641-56023660 | MS.gene94828:CDS | 50.0% |
| CAACCGCCTCCGAGGAAAAT+TGG | + | chr1.4:56023111-56023130 | MS.gene94828:CDS | 55.0% | |
| CCCTGAGAAGGAGGAGAAGA+AGG | + | chr1.4:56023203-56023222 | MS.gene94828:CDS | 55.0% | |
| CCGCCGCTTGAGAATGTTGA+AGG | + | chr1.4:56023411-56023430 | MS.gene94828:CDS | 55.0% | |
| CTCTTTACCGCAACAGGGTC+AGG | - | chr1.4:56023171-56023190 | None:intergenic | 55.0% | |
| CTTTACCGCAACAGGGTCAG+GGG | - | chr1.4:56023169-56023188 | None:intergenic | 55.0% | |
| GTGTGTATGCCGAACCTGGA+TGG | - | chr1.4:56024184-56024203 | None:intergenic | 55.0% | |
| TCTCCTCCTTCTCAGGGACA+GGG | - | chr1.4:56023200-56023219 | None:intergenic | 55.0% | |
| TGTTGCGGGGAGGATAACGT+GGG | + | chr1.4:56023698-56023717 | MS.gene94828:CDS | 55.0% | |
| TTCTCCTCCTTCTCAGGGAC+AGG | - | chr1.4:56023201-56023220 | None:intergenic | 55.0% | |
| TTGTGGTAGAGTCGAGTCCG+TGG | + | chr1.4:56023802-56023821 | MS.gene94828:CDS | 55.0% | |
| TTGTTGCGGGGAGGATAACG+TGG | + | chr1.4:56023697-56023716 | MS.gene94828:CDS | 55.0% | |
| ! | GGATGCTGCTTCGCTTGATC+TGG | + | chr1.4:56023617-56023636 | MS.gene94828:CDS | 55.0% |
| ! | GGGTTTTCTCGGATACGGGT+TGG | + | chr1.4:56023433-56023452 | MS.gene94828:CDS | 55.0% |
| AATCATCGCAACCGCCTCCG+AGG | + | chr1.4:56023103-56023122 | MS.gene94828:CDS | 60.0% | |
| AGAGTGATCCTTGTGGGGGG+AGG | + | chr1.4:56023274-56023293 | MS.gene94828:CDS | 60.0% | |
| CTCCTCCTTCTCAGGGACAG+GGG | - | chr1.4:56023199-56023218 | None:intergenic | 60.0% | |
| GGCTTATGAAGAGGCCGGAG+TGG | + | chr1.4:56023646-56023665 | MS.gene94828:CDS | 60.0% | |
| GGGCGTTCTCCCTGACCAAA+TGG | + | chr1.4:56022852-56022871 | MS.gene94828:CDS | 60.0% | |
| TGACACCCCTGACCCTGTTG+CGG | + | chr1.4:56023161-56023180 | MS.gene94828:CDS | 60.0% | |
| TGACACCCCTGTCCCTGAGA+AGG | + | chr1.4:56023191-56023210 | MS.gene94828:CDS | 60.0% | |
| AATGAGACGGCGCCCTGTGG+CGG | + | chr1.4:56022831-56022850 | MS.gene94828:CDS | 65.0% | |
| CACCCCTGTCCCTGAGAAGG+AGG | + | chr1.4:56023194-56023213 | MS.gene94828:CDS | 65.0% | |
| GCAAATGAGACGGCGCCCTG+TGG | + | chr1.4:56022828-56022847 | MS.gene94828:CDS | 65.0% | |
| ATGAGACGGCGCCCTGTGGC+GGG | + | chr1.4:56022832-56022851 | MS.gene94828:CDS | 70.0% | |
| CAGGGAGAACGCCCGCCACA+GGG | - | chr1.4:56022846-56022865 | None:intergenic | 70.0% | |
| CGGCGGCCCAAGACCAGCAT+TGG | - | chr1.4:56023397-56023416 | None:intergenic | 70.0% | |
| TCAGGGAGAACGCCCGCCAC+AGG | - | chr1.4:56022847-56022866 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 56022826 | 56024673 | 56022826 | ID=MS.gene94828 |
| chr1.4 | mRNA | 56022826 | 56024673 | 56022826 | ID=MS.gene94828.t1;Parent=MS.gene94828 |
| chr1.4 | exon | 56022826 | 56024673 | 56022826 | ID=MS.gene94828.t1.exon1;Parent=MS.gene94828.t1 |
| chr1.4 | CDS | 56022826 | 56024673 | 56022826 | ID=cds.MS.gene94828.t1;Parent=MS.gene94828.t1 |
| Gene Sequence |
| Protein sequence |
