AlfalfaGEDB | MS.gene94997

M. sativa cultivar XinJiangDaYe / MS.gene94997

KEGG: -
GO: -
PFAM: PF03018.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94997.t1	KEH41194.1	97.5	236	6	0	1	236	1	236	5.40E-110	407.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94997.t1	Q9T0H8	63.2	234	79	2	3	236	18	244	9.8e-76	284.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94997.t1	A0A072VGM0	97.5	236	6	0	1	236	1	236	3.9e-110	407.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052211	MS.gene94997	0.820205	7.76E-53	-1.69E-46
MS.gene054146	MS.gene94997	0.809779	1.60E-50	-1.69E-46
MS.gene054277	MS.gene94997	0.801597	8.35E-49	-1.69E-46
MS.gene057261	MS.gene94997	0.820793	5.68E-53	-1.69E-46
MS.gene060087	MS.gene94997	0.807865	4.10E-50	-1.69E-46
MS.gene060358	MS.gene94997	0.803048	4.20E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94997.t1	MTR_1g046490	97.458	236	6	0	1	236	1	236	2.83e-167	461
MS.gene94997.t1	MTR_1g046800	89.130	230	23	1	7	236	23	250	1.23e-146	409
MS.gene94997.t1	MTR_1g046500	89.565	230	22	1	7	236	23	250	2.42e-142	398
MS.gene94997.t1	MTR_4g062470	42.982	228	109	6	23	236	84	304	4.86e-40	140
MS.gene94997.t1	MTR_4g062520	42.060	233	113	6	19	236	78	303	5.81e-40	139
MS.gene94997.t1	MTR_1g115510	38.235	238	124	6	19	236	119	353	1.65e-38	137
MS.gene94997.t1	MTR_7g021300	36.719	256	122	8	5	234	146	387	3.86e-38	137
MS.gene94997.t1	MTR_4g062460	38.596	228	120	7	21	234	36	257	4.05e-34	123
MS.gene94997.t1	MTR_1g115515	27.854	219	126	4	23	236	43	234	1.84e-17	79.0
MS.gene94997.t1	MTR_1g054525	35.780	109	67	2	104	209	62	170	3.16e-15	72.0
MS.gene94997.t1	MTR_4g049550	37.069	116	64	3	122	234	66	175	1.08e-14	70.1
MS.gene94997.t1	MTR_4g122110	37.079	89	55	1	120	207	66	154	2.88e-14	68.9
MS.gene94997.t1	MTR_7g093790	41.053	95	54	2	119	211	75	169	6.17e-14	68.2
MS.gene94997.t1	MTR_4g122130	39.000	100	58	3	114	211	60	158	8.95e-14	67.8
MS.gene94997.t1	MTR_4g013385	40.000	90	53	1	122	210	78	167	9.46e-14	67.8
MS.gene94997.t1	MTR_0433s0040	40.000	90	53	1	122	210	78	167	9.46e-14	67.8
MS.gene94997.t1	MTR_7g093820	38.947	95	56	2	119	211	78	172	1.83e-13	67.0
MS.gene94997.t1	MTR_7g093850	40.000	95	55	2	119	211	78	172	2.09e-13	67.0
MS.gene94997.t1	MTR_7g093830	38.947	95	56	2	119	211	77	171	3.14e-13	66.6
MS.gene94997.t1	MTR_4g013335	29.927	137	93	2	76	209	36	172	3.21e-13	66.6
MS.gene94997.t1	MTR_4g049570	34.211	114	70	2	122	234	66	175	5.22e-13	65.5
MS.gene94997.t1	MTR_4g013310	30.147	136	84	3	106	236	67	196	7.46e-13	65.5
MS.gene94997.t1	MTR_4g013325	36.667	90	56	1	121	209	86	175	1.01e-12	65.1
MS.gene94997.t1	MTR_4g013770	38.298	94	57	1	121	213	78	171	2.15e-12	64.3
MS.gene94997.t1	MTR_3g034030	32.407	108	72	1	102	208	53	160	5.02e-12	63.2
MS.gene94997.t1	MTR_4g078885	31.481	108	73	1	102	208	53	160	2.71e-11	60.8
MS.gene94997.t1	MTR_7g093870	36.082	97	56	2	120	211	76	171	4.48e-11	60.8
MS.gene94997.t1	MTR_4g013345	35.955	89	56	1	122	209	84	172	6.35e-11	60.1
MS.gene94997.t1	MTR_5g096120	41.304	92	52	1	122	211	76	167	7.80e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94997.t1	AT4G13580	68.803	234	66	2	3	236	18	244	6.85e-109	313
MS.gene94997.t1	AT3G24020	66.525	236	72	2	1	236	15	243	1.98e-108	312
MS.gene94997.t1	AT1G07730	44.348	230	106	6	25	236	164	389	9.97e-44	151
MS.gene94997.t1	AT3G55230	39.918	243	124	7	15	236	62	303	1.14e-42	147
MS.gene94997.t1	AT2G28670	46.087	230	100	6	27	236	1	226	2.13e-42	144
MS.gene94997.t1	AT2G28670	46.121	232	101	6	25	236	209	436	1.43e-41	147
MS.gene94997.t1	AT2G39430	40.496	242	122	8	16	236	80	320	2.87e-41	143
MS.gene94997.t1	AT1G65870	33.636	110	70	2	108	214	62	171	1.22e-14	70.1
MS.gene94997.t1	AT5G42510	38.043	92	56	1	118	208	69	160	1.96e-13	67.0
MS.gene94997.t1	AT3G13650	34.409	93	60	1	122	213	74	166	2.83e-13	66.6
MS.gene94997.t1	AT5G42500	35.484	93	59	1	120	211	74	166	8.66e-13	65.1
MS.gene94997.t1	AT3G58090	34.091	88	57	1	125	211	163	250	3.47e-12	64.7
MS.gene94997.t1	AT5G49030	35.165	91	58	1	122	211	79	169	4.18e-12	65.9
MS.gene94997.t1	AT5G49040	35.165	91	58	1	122	211	79	169	4.77e-11	60.5
MS.gene94997.t1	AT1G22900	36.364	88	55	1	122	208	84	171	4.86e-11	60.5
MS.gene94997.t1	AT4G38700	36.082	97	57	3	120	211	72	168	7.50e-11	60.1

Find 70 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCTTTCCTGTGGCTGCAAT+TGG	0.276263	1.1:-29363328	None:intergenic
CCTACTGTTAATGGTGTTAC+TGG	0.279068	1.1:+29363523	MS.gene94997:CDS
GGATTAACACCATTTGCATT+AGG	0.297019	1.1:-29363502	None:intergenic
AAGTACTATGTCGCGATTAT+CGG	0.316886	1.1:+29363849	MS.gene94997:CDS
GGACCTGATGGACTTGGATT+AGG	0.319881	1.1:+29363631	MS.gene94997:CDS
GATGGACTTGGATTAGGATT+TGG	0.351208	1.1:+29363637	MS.gene94997:CDS
GATTAACACCATTTGCATTA+GGG	0.356622	1.1:-29363501	None:intergenic
GGTGTTACTGGTATCCCTTT+AGG	0.357291	1.1:+29363535	MS.gene94997:CDS
GGTGTTAATCCTACTGTTAA+TGG	0.373730	1.1:+29363514	MS.gene94997:CDS
TTAACATCTCAACCAGAGTT+AGG	0.377354	1.1:+29363685	MS.gene94997:CDS
ACTGGTATCCCTTTAGGAAC+TGG	0.388166	1.1:+29363541	MS.gene94997:CDS
TGATTGTTATTGTTATTGTT+TGG	0.402312	1.1:-29363586	None:intergenic
CTTGGAATGTTGAATCCAAC+TGG	0.413683	1.1:-29363463	None:intergenic
ACAAATTGTTGGAAAGGGTC+AGG	0.415848	1.1:+29363711	MS.gene94997:CDS
ACCTGTCCAGGTGGAATAAG+AGG	0.418722	1.1:-29363925	None:intergenic
TTGTTCATGCATGACATTCT+TGG	0.430091	1.1:+29363364	MS.gene94997:CDS
CCTTTAGGAACTGGTTTAGC+TGG	0.430422	1.1:+29363550	MS.gene94997:CDS
TTATCGGTTGTAGGAGGGAC+GGG	0.439221	1.1:+29363865	MS.gene94997:CDS
CCGGTCACTGGTCGAGCCGT+TGG	0.445896	1.1:-29363397	None:intergenic
ACACCATTTGCATTAGGGAT+TGG	0.448404	1.1:-29363496	None:intergenic
ACCTCTTATTCCACCTGGAC+AGG	0.449379	1.1:+29363924	MS.gene94997:CDS
GGAAGTTTAAGTATGCTAAA+GGG	0.460142	1.1:+29363887	MS.gene94997:CDS
GGGAAGTTTAAGTATGCTAA+AGG	0.463071	1.1:+29363886	MS.gene94997:CDS
CAGCTAAACCAGTTCCTAAA+GGG	0.469050	1.1:-29363549	None:intergenic
AACAATGTTCAGTTAACGTT+AGG	0.471550	1.1:+29363610	MS.gene94997:CDS
GGTTCACAAATTGTTGGAAA+GGG	0.477487	1.1:+29363706	MS.gene94997:CDS
TGCATGAACAACTCAATGAT+TGG	0.478315	1.1:-29363352	None:intergenic
ATGCCAATCCCTAATGCAAA+TGG	0.485841	1.1:+29363493	MS.gene94997:CDS
CGGTCACTGGTCGAGCCGTT+GGG	0.485879	1.1:-29363396	None:intergenic
CAAATTGTTGGAAAGGGTCA+GGG	0.488459	1.1:+29363712	MS.gene94997:CDS
CCAGCTAAACCAGTTCCTAA+AGG	0.497997	1.1:-29363550	None:intergenic
AATCCTAATCCAAGTCCATC+AGG	0.506312	1.1:-29363634	None:intergenic
GAGTTAGGTTCACAAATTGT+TGG	0.509703	1.1:+29363700	MS.gene94997:CDS
CGACCAGTGACCGGTTTGCT+CGG	0.510231	1.1:+29363406	MS.gene94997:CDS
CCTGGACAGGTTGCTACTGA+TGG	0.513998	1.1:+29363937	MS.gene94997:CDS
ATGTAGCAAGTTCGGCTGAC+GGG	0.514478	1.1:+29363740	MS.gene94997:CDS
AGGTTCACAAATTGTTGGAA+AGG	0.517920	1.1:+29363705	MS.gene94997:CDS
ACGTTAGGACCTGATGGACT+TGG	0.520993	1.1:+29363625	MS.gene94997:CDS
CCATCAGTAGCAACCTGTCC+AGG	0.527354	1.1:-29363937	None:intergenic
TCGCGATTATCGGTTGTAGG+AGG	0.528452	1.1:+29363859	MS.gene94997:CDS
GAATCCAACTGGGGTTGCAA+AGG	0.532298	1.1:-29363452	None:intergenic
ACAATTTGTGAACCTAACTC+TGG	0.539499	1.1:-29363697	None:intergenic
ATGTCGCGATTATCGGTTGT+AGG	0.540679	1.1:+29363856	MS.gene94997:CDS
GTATATGTTGCCGAGCAAAC+CGG	0.541501	1.1:-29363416	None:intergenic
TTCATGCATGACATTCTTGG+TGG	0.543393	1.1:+29363367	MS.gene94997:CDS
CTGAGACCTCTTATTCCACC+TGG	0.543896	1.1:+29363919	MS.gene94997:CDS
AATCCAACTGGGGTTGCAAA+GGG	0.544346	1.1:-29363451	None:intergenic
AATGATTGGTTCCTTTCCTG+TGG	0.544898	1.1:-29363338	None:intergenic
GGGATTGGCATACTATCACT+TGG	0.545050	1.1:-29363481	None:intergenic
TTGCCGAGCAAACCGGTCAC+TGG	0.546279	1.1:-29363409	None:intergenic
CGCGATTATCGGTTGTAGGA+GGG	0.549189	1.1:+29363860	MS.gene94997:CDS
GTACCCTTTGCAACCCCAGT+TGG	0.549320	1.1:+29363448	MS.gene94997:CDS
TCCAATTGCAGCCACAGGAA+AGG	0.562874	1.1:+29363327	MS.gene94997:CDS
TGACGGGAGTAGACAGATGA+TGG	0.563922	1.1:+29363756	MS.gene94997:CDS
ATTGATCCAATTGCAGCCAC+AGG	0.569919	1.1:+29363322	MS.gene94997:CDS
CCAGTAACACCATTAACAGT+AGG	0.579036	1.1:-29363523	None:intergenic
CAGTTAACGTTAGGACCTGA+TGG	0.580607	1.1:+29363619	MS.gene94997:CDS
AAATTGTTGGAAAGGGTCAG+GGG	0.581072	1.1:+29363713	MS.gene94997:CDS
TATGTAGCAAGTTCGGCTGA+CGG	0.590795	1.1:+29363739	MS.gene94997:CDS
TATCGGTTGTAGGAGGGACG+GGG	0.603964	1.1:+29363866	MS.gene94997:CDS
CCAACGGCTCGACCAGTGAC+CGG	0.606503	1.1:+29363397	MS.gene94997:CDS
TTGGAATGTTGAATCCAACT+GGG	0.618283	1.1:-29363462	None:intergenic
TACCATTGCAATGATGGCAA+TGG	0.622938	1.1:+29363282	None:intergenic
ATTATCGGTTGTAGGAGGGA+CGG	0.632538	1.1:+29363864	MS.gene94997:CDS
TCTTGGTGGCAGTAACCCAA+CGG	0.656099	1.1:+29363381	MS.gene94997:CDS
TCAGTAGCAACCTGTCCAGG+TGG	0.657359	1.1:-29363934	None:intergenic
AATTGTTGGAAAGGGTCAGG+GGG	0.661911	1.1:+29363714	MS.gene94997:CDS
ATGGTGCTGAGACTTTGTTG+AGG	0.693982	1.1:+29363956	MS.gene94997:CDS
TTGCTCGGCAACATATACAG+TGG	0.727097	1.1:+29363421	MS.gene94997:CDS
TGGAATGTTGAATCCAACTG+GGG	0.746650	1.1:-29363461	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TGATTGTTATTGTTATTGTT+TGG	-	chr1.1:29363589-29363608	None:intergenic	20.0%
!!!	TTTTATGGTTTGTATAAGAT+TGG	+	chr1.1:29363826-29363845	MS.gene94997:CDS	20.0%
!!	GGTGATAGTTTGAATTTTTA+TGG	+	chr1.1:29363811-29363830	MS.gene94997:CDS	25.0%
	AACAATGTTCAGTTAACGTT+AGG	+	chr1.1:29363610-29363629	MS.gene94997:CDS	30.0%
	GATTAACACCATTTGCATTA+GGG	-	chr1.1:29363504-29363523	None:intergenic	30.0%
	GGAAGTTTAAGTATGCTAAA+GGG	+	chr1.1:29363887-29363906	MS.gene94997:CDS	30.0%
!!	GTTTTTACAGCACTTTTTGA+AGG	+	chr1.1:29363778-29363797	MS.gene94997:CDS	30.0%
	AAGTACTATGTCGCGATTAT+CGG	+	chr1.1:29363849-29363868	MS.gene94997:CDS	35.0%
	ACAATTTGTGAACCTAACTC+TGG	-	chr1.1:29363700-29363719	None:intergenic	35.0%
	AGGTTCACAAATTGTTGGAA+AGG	+	chr1.1:29363705-29363724	MS.gene94997:CDS	35.0%
	GAGTTAGGTTCACAAATTGT+TGG	+	chr1.1:29363700-29363719	MS.gene94997:CDS	35.0%
	GGATTAACACCATTTGCATT+AGG	-	chr1.1:29363505-29363524	None:intergenic	35.0%
	GGGAAGTTTAAGTATGCTAA+AGG	+	chr1.1:29363886-29363905	MS.gene94997:CDS	35.0%
	GGTGTTAATCCTACTGTTAA+TGG	+	chr1.1:29363514-29363533	MS.gene94997:CDS	35.0%
	GGTTCACAAATTGTTGGAAA+GGG	+	chr1.1:29363706-29363725	MS.gene94997:CDS	35.0%
	TGCATGAACAACTCAATGAT+TGG	-	chr1.1:29363355-29363374	None:intergenic	35.0%
	TTAACATCTCAACCAGAGTT+AGG	+	chr1.1:29363685-29363704	MS.gene94997:CDS	35.0%
	TTGGAATGTTGAATCCAACT+GGG	-	chr1.1:29363465-29363484	None:intergenic	35.0%
	TTGTTCATGCATGACATTCT+TGG	+	chr1.1:29363364-29363383	MS.gene94997:CDS	35.0%
!!	TTACAGCACTTTTTGAAGGA+GGG	+	chr1.1:29363782-29363801	MS.gene94997:CDS	35.0%
!!	TTTACAGCACTTTTTGAAGG+AGG	+	chr1.1:29363781-29363800	MS.gene94997:CDS	35.0%
	AAATTGTTGGAAAGGGTCAG+GGG	+	chr1.1:29363713-29363732	MS.gene94997:CDS	40.0%
	AATCCTAATCCAAGTCCATC+AGG	-	chr1.1:29363637-29363656	None:intergenic	40.0%
	ACAAATTGTTGGAAAGGGTC+AGG	+	chr1.1:29363711-29363730	MS.gene94997:CDS	40.0%
	ACACCATTTGCATTAGGGAT+TGG	-	chr1.1:29363499-29363518	None:intergenic	40.0%
	ATGCCAATCCCTAATGCAAA+TGG	+	chr1.1:29363493-29363512	MS.gene94997:CDS	40.0%
	CAAATTGTTGGAAAGGGTCA+GGG	+	chr1.1:29363712-29363731	MS.gene94997:CDS	40.0%
	CAGCTAAACCAGTTCCTAAA+GGG	-	chr1.1:29363552-29363571	None:intergenic	40.0%
	CCAGTAACACCATTAACAGT+AGG	-	chr1.1:29363526-29363545	None:intergenic	40.0%
	CTTGGAATGTTGAATCCAAC+TGG	-	chr1.1:29363466-29363485	None:intergenic	40.0%
	TGGAATGTTGAATCCAACTG+GGG	-	chr1.1:29363464-29363483	None:intergenic	40.0%
	TTCATGCATGACATTCTTGG+TGG	+	chr1.1:29363367-29363386	MS.gene94997:CDS	40.0%
!	AATGATTGGTTCCTTTCCTG+TGG	-	chr1.1:29363341-29363360	None:intergenic	40.0%
!	GATGGACTTGGATTAGGATT+TGG	+	chr1.1:29363637-29363656	MS.gene94997:CDS	40.0%
!!	CCTACTGTTAATGGTGTTAC+TGG	+	chr1.1:29363523-29363542	MS.gene94997:CDS	40.0%
!!	TACAGCACTTTTTGAAGGAG+GGG	+	chr1.1:29363783-29363802	MS.gene94997:CDS	40.0%
	AATCCAACTGGGGTTGCAAA+GGG	-	chr1.1:29363454-29363473	None:intergenic	45.0%
	AATTGTTGGAAAGGGTCAGG+GGG	+	chr1.1:29363714-29363733	MS.gene94997:CDS	45.0%
	ATTGATCCAATTGCAGCCAC+AGG	+	chr1.1:29363322-29363341	MS.gene94997:CDS	45.0%
	CAGTTAACGTTAGGACCTGA+TGG	+	chr1.1:29363619-29363638	MS.gene94997:CDS	45.0%
	CCAGCTAAACCAGTTCCTAA+AGG	-	chr1.1:29363553-29363572	None:intergenic	45.0%
	GTATATGTTGCCGAGCAAAC+CGG	-	chr1.1:29363419-29363438	None:intergenic	45.0%
	TATGTAGCAAGTTCGGCTGA+CGG	+	chr1.1:29363739-29363758	MS.gene94997:CDS	45.0%
	TTGCTCGGCAACATATACAG+TGG	+	chr1.1:29363421-29363440	MS.gene94997:CDS	45.0%
!	ACTGGTATCCCTTTAGGAAC+TGG	+	chr1.1:29363541-29363560	MS.gene94997:CDS	45.0%
!	ATGGTGCTGAGACTTTGTTG+AGG	+	chr1.1:29363956-29363975	MS.gene94997:CDS	45.0%
!	ATGTCGCGATTATCGGTTGT+AGG	+	chr1.1:29363856-29363875	MS.gene94997:CDS	45.0%
!	ATTATCGGTTGTAGGAGGGA+CGG	+	chr1.1:29363864-29363883	MS.gene94997:CDS	45.0%
!	CCTTTAGGAACTGGTTTAGC+TGG	+	chr1.1:29363550-29363569	MS.gene94997:CDS	45.0%
!	GGGATTGGCATACTATCACT+TGG	-	chr1.1:29363484-29363503	None:intergenic	45.0%
!!	CTTTTTGAAGGAGGGGAGTA+TGG	+	chr1.1:29363790-29363809	MS.gene94997:CDS	45.0%
!!	GGTGTTACTGGTATCCCTTT+AGG	+	chr1.1:29363535-29363554	MS.gene94997:CDS	45.0%
	ACCTCTTATTCCACCTGGAC+AGG	+	chr1.1:29363924-29363943	MS.gene94997:CDS	50.0%
	ACCTGTCCAGGTGGAATAAG+AGG	-	chr1.1:29363928-29363947	None:intergenic	50.0%
	ATGTAGCAAGTTCGGCTGAC+GGG	+	chr1.1:29363740-29363759	MS.gene94997:CDS	50.0%
	CTGAGACCTCTTATTCCACC+TGG	+	chr1.1:29363919-29363938	MS.gene94997:CDS	50.0%
	GAATCCAACTGGGGTTGCAA+AGG	-	chr1.1:29363455-29363474	None:intergenic	50.0%
	TCCAATTGCAGCCACAGGAA+AGG	+	chr1.1:29363327-29363346	MS.gene94997:CDS	50.0%
	TCCTTTCCTGTGGCTGCAAT+TGG	-	chr1.1:29363331-29363350	None:intergenic	50.0%
	TGACGGGAGTAGACAGATGA+TGG	+	chr1.1:29363756-29363775	MS.gene94997:CDS	50.0%
!	CGCGATTATCGGTTGTAGGA+GGG	+	chr1.1:29363860-29363879	MS.gene94997:CDS	50.0%
!	GGGGGTGTATGTAGCAAGTT+CGG	+	chr1.1:29363732-29363751	MS.gene94997:CDS	50.0%
!	TCGCGATTATCGGTTGTAGG+AGG	+	chr1.1:29363859-29363878	MS.gene94997:CDS	50.0%
!	TCTTGGTGGCAGTAACCCAA+CGG	+	chr1.1:29363381-29363400	MS.gene94997:CDS	50.0%
!	TTATCGGTTGTAGGAGGGAC+GGG	+	chr1.1:29363865-29363884	MS.gene94997:CDS	50.0%
!!	ACGTTAGGACCTGATGGACT+TGG	+	chr1.1:29363625-29363644	MS.gene94997:CDS	50.0%
!!	GGACCTGATGGACTTGGATT+AGG	+	chr1.1:29363631-29363650	MS.gene94997:CDS	50.0%
	CCATCAGTAGCAACCTGTCC+AGG	-	chr1.1:29363940-29363959	None:intergenic	55.0%
	CCTGGACAGGTTGCTACTGA+TGG	+	chr1.1:29363937-29363956	MS.gene94997:CDS	55.0%
	GTACCCTTTGCAACCCCAGT+TGG	+	chr1.1:29363448-29363467	MS.gene94997:CDS	55.0%
	TCAGTAGCAACCTGTCCAGG+TGG	-	chr1.1:29363937-29363956	None:intergenic	55.0%
!	TATCGGTTGTAGGAGGGACG+GGG	+	chr1.1:29363866-29363885	MS.gene94997:CDS	55.0%
	TTGCCGAGCAAACCGGTCAC+TGG	-	chr1.1:29363412-29363431	None:intergenic	60.0%
!!	CGACCAGTGACCGGTTTGCT+CGG	+	chr1.1:29363406-29363425	MS.gene94997:CDS	60.0%
	CCAACGGCTCGACCAGTGAC+CGG	+	chr1.1:29363397-29363416	MS.gene94997:CDS	65.0%
	CGGTCACTGGTCGAGCCGTT+GGG	-	chr1.1:29363399-29363418	None:intergenic	65.0%
	CCGGTCACTGGTCGAGCCGT+TGG	-	chr1.1:29363400-29363419	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	29363292	29364002	29363292	ID=MS.gene94997
chr1.1	mRNA	29363292	29364002	29363292	ID=MS.gene94997.t1;Parent=MS.gene94997
chr1.1	exon	29363292	29364002	29363292	ID=MS.gene94997.t1.exon1;Parent=MS.gene94997.t1
chr1.1	CDS	29363292	29364002	29363292	ID=cds.MS.gene94997.t1;Parent=MS.gene94997.t1

Gene Sequence

>MS.gene94997

ATGATGGCAATGGCAACAAACATAACAGCTATTGATCCAATTGCAGCCACAGGAAAGGAACCAATCATTGAGTTGTTCATGCATGACATTCTTGGTGGCAGTAACCCAACGGCTCGACCAGTGACCGGTTTGCTCGGCAACATATACAGTGGTCAAGTACCCTTTGCAACCCCAGTTGGATTCAACATTCCAAGTGATAGTATGCCAATCCCTAATGCAAATGGTGTTAATCCTACTGTTAATGGTGTTACTGGTATCCCTTTAGGAACTGGTTTAGCTGGTACTTCTTTTGCACCAAACAATAACAATAACAATCAAAACAATGTTCAGTTAACGTTAGGACCTGATGGACTTGGATTAGGATTTGGTACAATCACTGTTATTGATGATATATTAACATCTCAACCAGAGTTAGGTTCACAAATTGTTGGAAAGGGTCAGGGGGTGTATGTAGCAAGTTCGGCTGACGGGAGTAGACAGATGATGGTTTTTACAGCACTTTTTGAAGGAGGGGAGTATGGTGATAGTTTGAATTTTTATGGTTTGTATAAGATTGGAAGTACTATGTCGCGATTATCGGTTGTAGGAGGGACGGGGAAGTTTAAGTATGCTAAAGGGTTTGCTGAACTGAGACCTCTTATTCCACCTGGACAGGTTGCTACTGATGGTGCTGAGACTTTGTTGAGGATTACTGTGCATTTGAAGTACTGA

Protein sequence

>MS.gene94997.t1

MMAMATNITAIDPIAATGKEPIIELFMHDILGGSNPTARPVTGLLGNIYSGQVPFATPVGFNIPSDSMPIPNANGVNPTVNGVTGIPLGTGLAGTSFAPNNNNNNQNNVQLTLGPDGLGLGFGTITVIDDILTSQPELGSQIVGKGQGVYVASSADGSRQMMVFTALFEGGEYGDSLNFYGLYKIGSTMSRLSVVGGTGKFKYAKGFAELRPLIPPGQVATDGAETLLRITVHLKY