Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95462.t1 | XP_003590733.2 | 98.2 | 114 | 2 | 0 | 1 | 114 | 1 | 114 | 3.40E-54 | 221.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95462.t1 | Q10MN5 | 56.2 | 48 | 21 | 0 | 150 | 197 | 168 | 215 | 5.8e-10 | 66.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95462.t1 | G7I2P6 | 98.2 | 114 | 2 | 0 | 1 | 114 | 1 | 114 | 2.5e-54 | 221.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050719 | MS.gene95462 | 0.805403 | 1.36E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene95462 | 0.806257 | 8.98E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene95462 | 0.822924 | 1.83E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene95462 | 0.815366 | 9.59E-52 | -1.69E-46 |
| MS.gene051957 | MS.gene95462 | 0.801893 | 7.26E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene95462 | 0.802955 | 4.39E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene95462 | 0.813123 | 3.00E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene95462 | 0.807401 | 5.15E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene95462 | 0.811155 | 8.06E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene95462 | -0.80165 | 8.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95462.t1 | MTR_1g073190 | 98.246 | 114 | 2 | 0 | 1 | 114 | 1 | 114 | 1.70e-78 | 232 |
| MS.gene95462.t1 | MTR_1g073190 | 98.058 | 103 | 2 | 0 | 1 | 103 | 1 | 103 | 2.59e-69 | 208 |
| MS.gene95462.t1 | MTR_1g087880 | 71.212 | 66 | 18 | 1 | 133 | 197 | 122 | 187 | 1.52e-20 | 90.9 |
| MS.gene95462.t1 | MTR_7g109130 | 59.091 | 66 | 26 | 1 | 133 | 197 | 126 | 191 | 1.74e-16 | 79.0 |
| MS.gene95462.t1 | MTR_7g109130 | 59.091 | 66 | 26 | 1 | 133 | 197 | 126 | 191 | 1.77e-16 | 79.0 |
| MS.gene95462.t1 | MTR_1g083770 | 64.583 | 48 | 17 | 0 | 150 | 197 | 145 | 192 | 2.07e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95462.t1 | AT1G48200 | 46.296 | 108 | 55 | 2 | 5 | 110 | 3 | 109 | 2.23e-20 | 84.0 |
| MS.gene95462.t1 | AT2G47500 | 63.636 | 44 | 16 | 0 | 150 | 193 | 147 | 190 | 6.24e-12 | 65.5 |
| MS.gene95462.t1 | AT2G47500 | 63.636 | 44 | 16 | 0 | 150 | 193 | 147 | 190 | 6.97e-12 | 65.5 |
Find 44 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCTATTAGGAACACTCTT+TGG | 0.246535 | 1.3:+52640100 | MS.gene95462:CDS |
| TGACTTCAATTCAATGTCTT+TGG | 0.269226 | 1.3:+52643552 | MS.gene95462:CDS |
| CCTAATAGACTTATTAGTTT+TGG | 0.270865 | 1.3:-52640088 | None:intergenic |
| GCTAATGGTGTATGGAAATT+TGG | 0.292995 | 1.3:+52643831 | MS.gene95462:CDS |
| TATTTCTCTCATCATCATTA+AGG | 0.302851 | 1.3:-52643602 | None:intergenic |
| CCAAAACTAATAAGTCTATT+AGG | 0.315405 | 1.3:+52640088 | MS.gene95462:CDS |
| GCAAGGCTCTATGAAATTTA+CGG | 0.323891 | 1.3:+52640180 | MS.gene95462:CDS |
| TATAGTGAATGGAAACAAAC+TGG | 0.351051 | 1.3:+52643807 | MS.gene95462:CDS |
| GTCTATTAGGAACACTCTTT+GGG | 0.365365 | 1.3:+52640101 | MS.gene95462:CDS |
| AGTTTGTTTCCATTCACTAT+AGG | 0.370258 | 1.3:-52643805 | None:intergenic |
| TAGAGCCTTGCCAAGGGAAC+TGG | 0.374122 | 1.3:-52640168 | None:intergenic |
| CACAGTGATCAATGTTGGTT+TGG | 0.374270 | 1.3:+52639981 | MS.gene95462:CDS |
| TGTTGGTGATTGGTATAATC+AGG | 0.380643 | 1.3:+52643917 | MS.gene95462:CDS |
| TTAGGAACACTCTTTGGGAT+TGG | 0.416748 | 1.3:+52640106 | MS.gene95462:CDS |
| TGCCGAAGCAGCGTCTGATT+CGG | 0.436762 | 1.3:+52640143 | MS.gene95462:CDS |
| CTCTTAAATCCTATAGTGAA+TGG | 0.444907 | 1.3:+52643796 | MS.gene95462:CDS |
| AGCCGAATCAGACGCTGCTT+CGG | 0.457423 | 1.3:-52640145 | None:intergenic |
| TGGAAACAAACTGGGGCTAA+TGG | 0.464682 | 1.3:+52643816 | MS.gene95462:CDS |
| TGTTGTTGGTCGAGATAGAA+AGG | 0.466181 | 1.3:+52643636 | MS.gene95462:CDS |
| TCATTAAGGAGTGAACTTGC+TGG | 0.471020 | 1.3:-52643588 | None:intergenic |
| TCAGTGATATTGATTGCTGC+TGG | 0.486647 | 1.3:+52644348 | MS.gene95462:CDS |
| AAACTGGGGCTAATGGTGTA+TGG | 0.492107 | 1.3:+52643823 | MS.gene95462:CDS |
| AAGGATTGTGAGTAGTGTAT+TGG | 0.499309 | 1.3:+52643773 | MS.gene95462:CDS |
| TGATTCGGCTCCAGTTCCCT+TGG | 0.500860 | 1.3:+52640158 | MS.gene95462:CDS |
| CGGCTCCAGTTCCCTTGGCA+AGG | 0.507167 | 1.3:+52640163 | MS.gene95462:CDS |
| GGAGTTCTCATAGAAGCCCT+TGG | 0.528661 | 1.3:+52644369 | MS.gene95462:CDS |
| GGATTAGCATCTTTCCTCAC+AGG | 0.533126 | 1.3:-52641023 | None:intergenic |
| TGAAGCTTTAGAAGCTGAGA+AGG | 0.533991 | 1.3:+52640056 | MS.gene95462:CDS |
| TTTAGGGAGGAAAATCATCA+AGG | 0.539794 | 1.3:+52643754 | MS.gene95462:intron |
| ATAGCGTGTGGAGTTGTTGT+TGG | 0.545611 | 1.3:+52643622 | MS.gene95462:CDS |
| ACAGTGATCAATGTTGGTTT+GGG | 0.553382 | 1.3:+52639982 | MS.gene95462:CDS |
| CAAAATATCAGCATATCACC+TGG | 0.559053 | 1.3:-52644445 | None:intergenic |
| AGTAACACAGTGATCAATGT+TGG | 0.560249 | 1.3:+52639976 | MS.gene95462:CDS |
| CCTCCTCAACAATCTGCACC+TGG | 0.565711 | 1.3:+52640213 | MS.gene95462:CDS |
| AGGAAAGATGCTAATCCAGC+TGG | 0.568309 | 1.3:+52641029 | MS.gene95462:CDS |
| CCAGGTGCAGATTGTTGAGG+AGG | 0.576080 | 1.3:-52640213 | None:intergenic |
| ATAGTGAATGGAAACAAACT+GGG | 0.606384 | 1.3:+52643808 | MS.gene95462:CDS |
| TTACCAGGTGCAGATTGTTG+AGG | 0.618119 | 1.3:-52640216 | None:intergenic |
| AATTTCATAGAGCCTTGCCA+AGG | 0.629006 | 1.3:-52640175 | None:intergenic |
| AATGGTGTATGGAAATTTGG+TGG | 0.640177 | 1.3:+52643834 | MS.gene95462:CDS |
| ATTTCATAGAGCCTTGCCAA+GGG | 0.656909 | 1.3:-52640174 | None:intergenic |
| TTGGTATAATCAGGACTACA+CGG | 0.672430 | 1.3:+52643926 | MS.gene95462:CDS |
| TAGTGAATGGAAACAAACTG+GGG | 0.713604 | 1.3:+52643809 | MS.gene95462:CDS |
| ATGATGAGAGAAATAGCGTG+TGG | 0.733456 | 1.3:+52643610 | MS.gene95462:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAATAATAAATAGTTAA+GGG | - | chr1.3:52641831-52641850 | None:intergenic | 10.0% |
| !! | TCCATATAATTTATTAATTA+AGG | + | chr1.3:52641875-52641894 | MS.gene95462:intron | 10.0% |
| !! | TCCTTAATTAATAAATTATA+TGG | - | chr1.3:52641879-52641898 | None:intergenic | 10.0% |
| !!! | AAGTAATAAAAATGTTATTT+TGG | + | chr1.3:52642381-52642400 | MS.gene95462:intron | 10.0% |
| !!! | TTATCATATTATTTTTTCAT+TGG | + | chr1.3:52641163-52641182 | MS.gene95462:intron | 10.0% |
| !! | AAAAAAAAAAACAAAAGAAG+TGG | + | chr1.3:52642560-52642579 | MS.gene95462:intron | 15.0% |
| !! | AAAAAAAAAACAAAAGAAGT+GGG | + | chr1.3:52642561-52642580 | MS.gene95462:intron | 15.0% |
| !! | GAGATAATAATAAATAGTTA+AGG | - | chr1.3:52641832-52641851 | None:intergenic | 15.0% |
| !! | GTATAATAAAATATCTAACT+TGG | - | chr1.3:52640898-52640917 | None:intergenic | 15.0% |
| !! | TATATACTATTCTTAGATTT+AGG | + | chr1.3:52642339-52642358 | MS.gene95462:intron | 15.0% |
| !!! | AAAGTACATTAATGTTTTAT+TGG | - | chr1.3:52641798-52641817 | None:intergenic | 15.0% |
| !!! | AATTCAAAAATTTAGGTTTT+TGG | + | chr1.3:52642723-52642742 | MS.gene95462:intron | 15.0% |
| !!! | GTAATTGATTTATGTTTTTA+GGG | + | chr1.3:52643738-52643757 | MS.gene95462:intron | 15.0% |
| !!! | TATGATTGTATTTATTTTGT+GGG | + | chr1.3:52644237-52644256 | MS.gene95462:intron | 15.0% |
| !!! | TGCTTTTAATTCAAAAATTT+AGG | + | chr1.3:52642716-52642735 | MS.gene95462:intron | 15.0% |
| !!! | TGTAATTGATTTATGTTTTT+AGG | + | chr1.3:52643737-52643756 | MS.gene95462:intron | 15.0% |
| !! | AAAAATGAAAATGCAAATTC+AGG | - | chr1.3:52644018-52644037 | None:intergenic | 20.0% |
| !! | AATGATTGTATGCATTTATA+TGG | + | chr1.3:52640303-52640322 | MS.gene95462:intron | 20.0% |
| !! | AGTAAAATGATATCTAATTG+AGG | - | chr1.3:52642150-52642169 | None:intergenic | 20.0% |
| !! | ATAATGTAATTGTTTGCATA+AGG | + | chr1.3:52641235-52641254 | MS.gene95462:intron | 20.0% |
| !! | ATTAAAGATTGCAAAAAAGT+AGG | - | chr1.3:52641569-52641588 | None:intergenic | 20.0% |
| !! | CAAAATGAAACTTAAATGAA+AGG | - | chr1.3:52643962-52643981 | None:intergenic | 20.0% |
| !! | CAATCTTTAATAAGCATATT+TGG | + | chr1.3:52641578-52641597 | MS.gene95462:intron | 20.0% |
| !! | CTATTATTTCATATCTTTCT+GGG | + | chr1.3:52641395-52641414 | MS.gene95462:intron | 20.0% |
| !! | CTCCAAAATTAAAACAAAAA+AGG | - | chr1.3:52642253-52642272 | None:intergenic | 20.0% |
| !! | GTTTAGTAGATTTAAATCTA+TGG | - | chr1.3:52642430-52642449 | None:intergenic | 20.0% |
| !! | TCTATTATTTCATATCTTTC+TGG | + | chr1.3:52641394-52641413 | MS.gene95462:intron | 20.0% |
| !! | TTAAATCTACTAAACTAGAT+AGG | + | chr1.3:52642435-52642454 | MS.gene95462:intron | 20.0% |
| !!! | AAAATGTTATTTTGGCTTTT+AGG | + | chr1.3:52642389-52642408 | MS.gene95462:intron | 20.0% |
| !!! | AAATGTTATTTTGGCTTTTA+GGG | + | chr1.3:52642390-52642409 | MS.gene95462:intron | 20.0% |
| !!! | AGTTCAATAAAATTTGACTT+TGG | + | chr1.3:52643704-52643723 | MS.gene95462:intron | 20.0% |
| !!! | ATATTTTTCCTTTGACTTTT+TGG | + | chr1.3:52644392-52644411 | MS.gene95462:CDS | 20.0% |
| !!! | ATGATTGTATTTATTTTGTG+GGG | + | chr1.3:52644238-52644257 | MS.gene95462:intron | 20.0% |
| !!! | ATTAGATATCATTTTACTTG+CGG | + | chr1.3:52642152-52642171 | MS.gene95462:intron | 20.0% |
| !!! | CACCTTTTTTGTTTTAATTT+TGG | + | chr1.3:52642248-52642267 | MS.gene95462:intron | 20.0% |
| !!! | CTATGATTGTATTTATTTTG+TGG | + | chr1.3:52644236-52644255 | MS.gene95462:intron | 20.0% |
| !!! | CTGATAAATTTTCATTATGT+TGG | + | chr1.3:52643900-52643919 | MS.gene95462:CDS | 20.0% |
| !!! | GATATTTTATTATACCAATC+AGG | + | chr1.3:52640903-52640922 | MS.gene95462:intron | 20.0% |
| !!! | TAAATAGTTAAGGGTATAAT+AGG | - | chr1.3:52641822-52641841 | None:intergenic | 20.0% |
| !!! | TATTTTTCCTTTGACTTTTT+GGG | + | chr1.3:52644393-52644412 | MS.gene95462:CDS | 20.0% |
| !!! | TCATTTAAGTTTCATTTTGA+GGG | + | chr1.3:52643963-52643982 | MS.gene95462:intron | 20.0% |
| !!! | TGTAAATCGACTTATAATTA+AGG | - | chr1.3:52641772-52641791 | None:intergenic | 20.0% |
| !!! | TTCATTTAAGTTTCATTTTG+AGG | + | chr1.3:52643962-52643981 | MS.gene95462:intron | 20.0% |
| !!! | TTTCTTCTTTTCAATTCTAA+TGG | + | chr1.3:52644083-52644102 | MS.gene95462:intron | 20.0% |
| !!! | TTTGATGATTAAACTGATTT+GGG | + | chr1.3:52643298-52643317 | MS.gene95462:intron | 20.0% |
| !!! | TTTTATTTTTGGATCTTTTG+CGG | + | chr1.3:52642009-52642028 | MS.gene95462:intron | 20.0% |
| !!! | TTTTCTTTTCACACATATAT+AGG | - | chr1.3:52642538-52642557 | None:intergenic | 20.0% |
| !!! | TTTTGATGATTAAACTGATT+TGG | + | chr1.3:52643297-52643316 | MS.gene95462:intron | 20.0% |
| !!! | TTTTTATCTTACTGAATTTC+TGG | + | chr1.3:52644182-52644201 | MS.gene95462:intron | 20.0% |
| ! | AAAAATTGAATTACATCTGG+AGG | - | chr1.3:52640602-52640621 | None:intergenic | 25.0% |
| ! | AAAGAACAAATAATGAGAAG+AGG | - | chr1.3:52640660-52640679 | None:intergenic | 25.0% |
| ! | AAATACATAAAAGGTTGAGT+AGG | + | chr1.3:52642061-52642080 | MS.gene95462:intron | 25.0% |
| ! | AAGCTACTTATAATTTGAGA+AGG | - | chr1.3:52641732-52641751 | None:intergenic | 25.0% |
| ! | AATACATAAAAGGTTGAGTA+GGG | + | chr1.3:52642062-52642081 | MS.gene95462:intron | 25.0% |
| ! | AATTTGATGAATTGTTTGAG+AGG | + | chr1.3:52640470-52640489 | MS.gene95462:intron | 25.0% |
| ! | AGAGATAAAAACAAATTACC+AGG | - | chr1.3:52640234-52640253 | None:intergenic | 25.0% |
| ! | AGTGTAAACTCTACTAAAAT+TGG | - | chr1.3:52644284-52644303 | None:intergenic | 25.0% |
| ! | ATACTATTCTTAGATTTAGG+CGG | + | chr1.3:52642342-52642361 | MS.gene95462:intron | 25.0% |
| ! | ATTTGATGAATTGTTTGAGA+GGG | + | chr1.3:52640471-52640490 | MS.gene95462:intron | 25.0% |
| ! | CCAAAACTAATAAGTCTATT+AGG | + | chr1.3:52640088-52640107 | MS.gene95462:CDS | 25.0% |
| ! | CCATGTAAAAGAAATTTACA+TGG | - | chr1.3:52640835-52640854 | None:intergenic | 25.0% |
| ! | GAAGTGGATAAATTGTAATT+AGG | + | chr1.3:52643137-52643156 | MS.gene95462:intron | 25.0% |
| ! | GAGGAGAATAAATACATAAA+AGG | + | chr1.3:52642052-52642071 | MS.gene95462:intron | 25.0% |
| ! | GATATGAAATAATAGAACTG+AGG | - | chr1.3:52641390-52641409 | None:intergenic | 25.0% |
| ! | GCAAAAGATCCAAAAATAAA+AGG | - | chr1.3:52642010-52642029 | None:intergenic | 25.0% |
| ! | TACTTATAATTTGAGAAGGA+GGG | - | chr1.3:52641728-52641747 | None:intergenic | 25.0% |
| ! | TATGAGAAAGAGATATTATG+AGG | - | chr1.3:52641917-52641936 | None:intergenic | 25.0% |
| ! | TATTTCTCTCATCATCATTA+AGG | - | chr1.3:52643605-52643624 | None:intergenic | 25.0% |
| ! | TGAATTGATGTTTAGTGTTT+GGG | + | chr1.3:52642871-52642890 | MS.gene95462:intron | 25.0% |
| ! | TGGTAACTTAAATATAGCAT+TGG | - | chr1.3:52643004-52643023 | None:intergenic | 25.0% |
| ! | TTGAATTGATGTTTAGTGTT+TGG | + | chr1.3:52642870-52642889 | MS.gene95462:intron | 25.0% |
| !! | AATCAAGTGATTTTTGTTCT+TGG | + | chr1.3:52643273-52643292 | MS.gene95462:intron | 25.0% |
| !! | CCAGATGTAATTCAATTTTT+GGG | + | chr1.3:52640602-52640621 | MS.gene95462:intron | 25.0% |
| !! | CCATGTAAATTTCTTTTACA+TGG | + | chr1.3:52640832-52640851 | MS.gene95462:intron | 25.0% |
| !! | TCCAGATGTAATTCAATTTT+TGG | + | chr1.3:52640601-52640620 | MS.gene95462:intron | 25.0% |
| !! | TCTTTTCAATTCTAATGGAA+AGG | + | chr1.3:52644088-52644107 | MS.gene95462:intron | 25.0% |
| !!! | AAGCTGTTTTTGTGTTTTAA+AGG | + | chr1.3:52643392-52643411 | MS.gene95462:intron | 25.0% |
| !!! | AGGTTTCTACAATCATTTTT+CGG | + | chr1.3:52640383-52640402 | MS.gene95462:intron | 25.0% |
| !!! | ATAAAGTATTTTCTGAGAGT+AGG | + | chr1.3:52641126-52641145 | MS.gene95462:intron | 25.0% |
| !!! | ATTGATTTATGTTTTTAGGG+AGG | + | chr1.3:52643741-52643760 | MS.gene95462:intron | 25.0% |
| !!! | CCTAATAGACTTATTAGTTT+TGG | - | chr1.3:52640091-52640110 | None:intergenic | 25.0% |
| !!! | GCTTTATTTTTTGGAAATAG+AGG | + | chr1.3:52642033-52642052 | MS.gene95462:intron | 25.0% |
| !!! | GTTTGTTTCTTTGCAATTTT+GGG | + | chr1.3:52642745-52642764 | MS.gene95462:intron | 25.0% |
| AAACGTCGTATAATTTGAGA+TGG | + | chr1.3:52641976-52641995 | MS.gene95462:intron | 30.0% | |
| AAAGTGATTATGGAGGATTA+GGG | + | chr1.3:52643106-52643125 | MS.gene95462:intron | 30.0% | |
| ACCACAACAGAAGTAATTAT+AGG | - | chr1.3:52640990-52641009 | None:intergenic | 30.0% | |
| ACCTATAATTACTTCTGTTG+TGG | + | chr1.3:52640986-52641005 | MS.gene95462:intron | 30.0% | |
| AGTCAAAGGAAAAATATCCA+AGG | - | chr1.3:52644389-52644408 | None:intergenic | 30.0% | |
| ATAGGTAAGAAATCATGACA+TGG | - | chr1.3:52640972-52640991 | None:intergenic | 30.0% | |
| ATAGTGAATGGAAACAAACT+GGG | + | chr1.3:52643808-52643827 | MS.gene95462:CDS | 30.0% | |
| ATCTTGTAAAGCAGTAGTAA+AGG | + | chr1.3:52640857-52640876 | MS.gene95462:intron | 30.0% | |
| ATTATACCAATCAGGTGAAT+TGG | + | chr1.3:52640911-52640930 | MS.gene95462:intron | 30.0% | |
| ATTGCAAAAAAGTAGGCTAT+GGG | - | chr1.3:52641562-52641581 | None:intergenic | 30.0% | |
| CAAAACGTGTAACCAAATAT+TGG | + | chr1.3:52640626-52640645 | MS.gene95462:intron | 30.0% | |
| CAAGTAGTGAAAAGATGAAA+GGG | + | chr1.3:52641503-52641522 | MS.gene95462:intron | 30.0% | |
| CATGGTAGTTGTTGTAAATT+TGG | - | chr1.3:52640817-52640836 | None:intergenic | 30.0% | |
| CCCAAAAATTGAATTACATC+TGG | - | chr1.3:52640605-52640624 | None:intergenic | 30.0% | |
| CTACTTATAATTTGAGAAGG+AGG | - | chr1.3:52641729-52641748 | None:intergenic | 30.0% | |
| CTCTTAAATCCTATAGTGAA+TGG | + | chr1.3:52643796-52643815 | MS.gene95462:CDS | 30.0% | |
| CTTATTCCTTCTTGAATCTA+AGG | + | chr1.3:52642663-52642682 | MS.gene95462:intron | 30.0% | |
| GAAAAATGATGATACTACCA+GGG | - | chr1.3:52641700-52641719 | None:intergenic | 30.0% | |
| GAGTTTACACTGAATAGAAA+CGG | + | chr1.3:52644293-52644312 | MS.gene95462:intron | 30.0% | |
| GTCAAAGGAAAAATATCCAA+GGG | - | chr1.3:52644388-52644407 | None:intergenic | 30.0% | |
| TAAGTTACCATATGAGTAGT+TGG | + | chr1.3:52643014-52643033 | MS.gene95462:intron | 30.0% | |
| TAATAGAACTGAGGTATATG+TGG | - | chr1.3:52641381-52641400 | None:intergenic | 30.0% | |
| TACTATTCTTAGATTTAGGC+GGG | + | chr1.3:52642343-52642362 | MS.gene95462:intron | 30.0% | |
| TAGCATTAACCAATTCAATG+AGG | + | chr1.3:52640264-52640283 | MS.gene95462:intron | 30.0% | |
| TATAGTGAATGGAAACAAAC+TGG | + | chr1.3:52643807-52643826 | MS.gene95462:CDS | 30.0% | |
| TGAAAAATGATGATACTACC+AGG | - | chr1.3:52641701-52641720 | None:intergenic | 30.0% | |
| TGACTTCAATTCAATGTCTT+TGG | + | chr1.3:52643552-52643571 | MS.gene95462:CDS | 30.0% | |
| TGTAAGAAACTCATTGATAG+TGG | + | chr1.3:52640558-52640577 | MS.gene95462:intron | 30.0% | |
| TTGTTATACACATAGGTTAC+TGG | + | chr1.3:52640695-52640714 | MS.gene95462:intron | 30.0% | |
| TTTACTACTGCTTTACAAGA+TGG | - | chr1.3:52640858-52640877 | None:intergenic | 30.0% | |
| TTTCACACATATATAGGCAA+GGG | - | chr1.3:52642532-52642551 | None:intergenic | 30.0% | |
| TTTGTTCTTTGCTTTGATTG+TGG | + | chr1.3:52640670-52640689 | MS.gene95462:intron | 30.0% | |
| ! | AAGTAGCAATTAAGTTGTTG+TGG | + | chr1.3:52642840-52642859 | MS.gene95462:intron | 30.0% |
| ! | AAGTGTGAAGTTTGCATTTT+TGG | + | chr1.3:52641630-52641649 | MS.gene95462:intron | 30.0% |
| ! | AGTAGCAATTAAGTTGTTGT+GGG | + | chr1.3:52642841-52642860 | MS.gene95462:intron | 30.0% |
| ! | AGTAGCTATCCATATTTTCA+AGG | - | chr1.3:52642124-52642143 | None:intergenic | 30.0% |
| ! | AGTTTGTTTCCATTCACTAT+AGG | - | chr1.3:52643808-52643827 | None:intergenic | 30.0% |
| ! | CAATATTTGGTTACACGTTT+TGG | - | chr1.3:52640628-52640647 | None:intergenic | 30.0% |
| ! | CAGATCTCAGATCATTATTT+TGG | - | chr1.3:52641060-52641079 | None:intergenic | 30.0% |
| ! | CATTTTCGTCAATTGGTAAA+TGG | + | chr1.3:52642502-52642521 | MS.gene95462:intron | 30.0% |
| ! | TACGATTTTGCCCTTATTAA+GGG | + | chr1.3:52642479-52642498 | MS.gene95462:intron | 30.0% |
| ! | TGATCTGAATTTTGCTAAGT+TGG | + | chr1.3:52644158-52644177 | MS.gene95462:intron | 30.0% |
| ! | TTACGATTTTGCCCTTATTA+AGG | + | chr1.3:52642478-52642497 | MS.gene95462:intron | 30.0% |
| ! | TTGGACTGATAAACTGTTTT+GGG | + | chr1.3:52643033-52643052 | MS.gene95462:intron | 30.0% |
| ! | TTTCATTTCTGTTTTCTTCC+AGG | + | chr1.3:52644427-52644446 | MS.gene95462:CDS | 30.0% |
| ! | TTTTCACACATATATAGGCA+AGG | - | chr1.3:52642533-52642552 | None:intergenic | 30.0% |
| ! | TTTTGCAAAGAATCATCACA+CGG | - | chr1.3:52643462-52643481 | None:intergenic | 30.0% |
| !! | GAGATGATTTGTTAGTTGTT+TGG | - | chr1.3:52641351-52641370 | None:intergenic | 30.0% |
| !! | GGTTTGTTTCTTTGCAATTT+TGG | + | chr1.3:52642744-52642763 | MS.gene95462:intron | 30.0% |
| !! | TGTGGATTTGTTATACACAT+AGG | + | chr1.3:52640688-52640707 | MS.gene95462:intron | 30.0% |
| !!! | AGGTGCAGATTTTTTTATCA+AGG | - | chr1.3:52642233-52642252 | None:intergenic | 30.0% |
| !!! | GGTGCAGATTTTTTTATCAA+GGG | - | chr1.3:52642232-52642251 | None:intergenic | 30.0% |
| !!! | GTGCAGATTTTTTTATCAAG+GGG | - | chr1.3:52642231-52642250 | None:intergenic | 30.0% |
| !!! | TTCTGGTTAGTTTTGACAAA+GGG | + | chr1.3:52640790-52640809 | MS.gene95462:intron | 30.0% |
| AACTAACCAGAACAAAGATG+AGG | - | chr1.3:52640782-52640801 | None:intergenic | 35.0% | |
| AAGCTGACAGAAAGTGATTA+TGG | + | chr1.3:52643096-52643115 | MS.gene95462:intron | 35.0% | |
| AAGGATTGTGAGTAGTGTAT+TGG | + | chr1.3:52643773-52643792 | MS.gene95462:CDS | 35.0% | |
| AATACAAGTTGTTGCAGGTA+TGG | + | chr1.3:52642959-52642978 | MS.gene95462:intron | 35.0% | |
| AATGGTGTATGGAAATTTGG+TGG | + | chr1.3:52643834-52643853 | MS.gene95462:CDS | 35.0% | |
| AGATGAGGAGCAAATAACAA+TGG | - | chr1.3:52640767-52640786 | None:intergenic | 35.0% | |
| AGTAACACAGTGATCAATGT+TGG | + | chr1.3:52639976-52639995 | MS.gene95462:CDS | 35.0% | |
| AGTCTATTAGGAACACTCTT+TGG | + | chr1.3:52640100-52640119 | MS.gene95462:CDS | 35.0% | |
| CAAAACAGAGAGACATTTCA+TGG | + | chr1.3:52643477-52643496 | MS.gene95462:intron | 35.0% | |
| CAGTAGTAAAGGTTTGATGT+TGG | + | chr1.3:52640868-52640887 | MS.gene95462:intron | 35.0% | |
| CCAAGTAGTGAAAAGATGAA+AGG | + | chr1.3:52641502-52641521 | MS.gene95462:intron | 35.0% | |
| GAAAGTGATTATGGAGGATT+AGG | + | chr1.3:52643105-52643124 | MS.gene95462:intron | 35.0% | |
| GACGAAAATGCCCTTAATAA+GGG | - | chr1.3:52642492-52642511 | None:intergenic | 35.0% | |
| GAGGAACAAACACCAATATT+TGG | - | chr1.3:52640641-52640660 | None:intergenic | 35.0% | |
| GATTGCAAAAAAGTAGGCTA+TGG | - | chr1.3:52641563-52641582 | None:intergenic | 35.0% | |
| GCAAGGCTCTATGAAATTTA+CGG | + | chr1.3:52640180-52640199 | MS.gene95462:CDS | 35.0% | |
| GCTAATGGTGTATGGAAATT+TGG | + | chr1.3:52643831-52643850 | MS.gene95462:CDS | 35.0% | |
| GGCAAAATGAAGAGAAGTTA+GGG | + | chr1.3:52641524-52641543 | MS.gene95462:intron | 35.0% | |
| GTCTATTAGGAACACTCTTT+GGG | + | chr1.3:52640101-52640120 | MS.gene95462:CDS | 35.0% | |
| TAACCAATTCAATGAGGCAA+TGG | + | chr1.3:52640270-52640289 | MS.gene95462:intron | 35.0% | |
| TAGTGAATGGAAACAAACTG+GGG | + | chr1.3:52643809-52643828 | MS.gene95462:CDS | 35.0% | |
| TATCAGTCCAACTACTCATA+TGG | - | chr1.3:52643024-52643043 | None:intergenic | 35.0% | |
| TGACGAAAATGCCCTTAATA+AGG | - | chr1.3:52642493-52642512 | None:intergenic | 35.0% | |
| TGCTATACCCAAAAAGTCAA+AGG | - | chr1.3:52644403-52644422 | None:intergenic | 35.0% | |
| TTCACACATATATAGGCAAG+GGG | - | chr1.3:52642531-52642550 | None:intergenic | 35.0% | |
| TTCTGGTAGAATAGACGTTA+TGG | + | chr1.3:52644199-52644218 | MS.gene95462:intron | 35.0% | |
| TTGCAAAAAAGTAGGCTATG+GGG | - | chr1.3:52641561-52641580 | None:intergenic | 35.0% | |
| TTTAGGGAGGAAAATCATCA+AGG | + | chr1.3:52643754-52643773 | MS.gene95462:intron | 35.0% | |
| ! | ATTTTACTTGCGGATATCTC+TGG | + | chr1.3:52642162-52642181 | MS.gene95462:intron | 35.0% |
| ! | CAAGTAGATTTAGAACTTGG+AGG | + | chr1.3:52641186-52641205 | MS.gene95462:intron | 35.0% |
| ! | CCTTTCATCTTTTCACTACT+TGG | - | chr1.3:52641505-52641524 | None:intergenic | 35.0% |
| ! | GTAGCAATTAAGTTGTTGTG+GGG | + | chr1.3:52642842-52642861 | MS.gene95462:intron | 35.0% |
| ! | GTCGTATAATTTGAGATGGA+GGG | + | chr1.3:52641980-52641999 | MS.gene95462:intron | 35.0% |
| ! | GTTGGACTGATAAACTGTTT+TGG | + | chr1.3:52643032-52643051 | MS.gene95462:intron | 35.0% |
| ! | TATAAGCTTTTAGCGTTGCA+AGG | + | chr1.3:52641097-52641116 | MS.gene95462:intron | 35.0% |
| ! | TGGCAAGTAGATTTAGAACT+TGG | + | chr1.3:52641183-52641202 | MS.gene95462:intron | 35.0% |
| ! | TGTTTTGCAGAAGCTTAAGT+TGG | + | chr1.3:52642936-52642955 | MS.gene95462:intron | 35.0% |
| ! | TTTCTCACAAGATTTTGCAG+TGG | - | chr1.3:52643877-52643896 | None:intergenic | 35.0% |
| ! | TTTTACTTGCGGATATCTCT+GGG | + | chr1.3:52642163-52642182 | MS.gene95462:intron | 35.0% |
| !! | ACAGTGATCAATGTTGGTTT+GGG | + | chr1.3:52639982-52640001 | MS.gene95462:CDS | 35.0% |
| !! | AGCTAGGAATAAGCTGTTTT+TGG | + | chr1.3:52643177-52643196 | MS.gene95462:intron | 35.0% |
| !!! | AAACTGATTTGGGCTGTTTT+TGG | + | chr1.3:52643308-52643327 | MS.gene95462:intron | 35.0% |
| !!! | AGCTGTTTTTGGAAGAAGTT+TGG | + | chr1.3:52643188-52643207 | MS.gene95462:intron | 35.0% |
| !!! | GAGGGAGTACCTTTTATTTT+TGG | + | chr1.3:52641998-52642017 | MS.gene95462:intron | 35.0% |
| !!! | GTTCTGGTTAGTTTTGACAA+AGG | + | chr1.3:52640789-52640808 | MS.gene95462:intron | 35.0% |
| !!! | TCTCAGATCATTATTTTGGC+CGG | - | chr1.3:52641056-52641075 | None:intergenic | 35.0% |
| !!! | TTAAGGGCATTTTCGTCAAT+TGG | + | chr1.3:52642495-52642514 | MS.gene95462:intron | 35.0% |
| !!! | TTGACTTTTTGGGTATAGCA+TGG | + | chr1.3:52644403-52644422 | MS.gene95462:CDS | 35.0% |
| !!! | TTGCATTTTTGGCTTTCTCA+TGG | + | chr1.3:52641641-52641660 | MS.gene95462:intron | 35.0% |
| !!! | TTTTGCGGCGCTTTATTTTT+TGG | + | chr1.3:52642024-52642043 | MS.gene95462:intron | 35.0% |
| !!! | TTTTGGCTTTTAGGGTTTCA+TGG | + | chr1.3:52642398-52642417 | MS.gene95462:intron | 35.0% |
| AATTTCATAGAGCCTTGCCA+AGG | - | chr1.3:52640178-52640197 | None:intergenic | 40.0% | |
| ACAACTCGCAGGAAACTATA+TGG | - | chr1.3:52640411-52640430 | None:intergenic | 40.0% | |
| ACCTATAGATTCAGCCAAAG+TGG | - | chr1.3:52643530-52643549 | None:intergenic | 40.0% | |
| AGAATCATCACACGGAAGTT+AGG | - | chr1.3:52643454-52643473 | None:intergenic | 40.0% | |
| ATGATACTACCAGGGCTTAT+TGG | - | chr1.3:52641692-52641711 | None:intergenic | 40.0% | |
| ATGATGAGAGAAATAGCGTG+TGG | + | chr1.3:52643610-52643629 | MS.gene95462:CDS | 40.0% | |
| ATTATGGAGGATTAGGGCAA+GGG | + | chr1.3:52643112-52643131 | MS.gene95462:intron | 40.0% | |
| ATTCAATGAGGCAATGGAAG+TGG | + | chr1.3:52640276-52640295 | MS.gene95462:intron | 40.0% | |
| ATTGTAATTAGGCCGCTGAT+TGG | + | chr1.3:52643148-52643167 | MS.gene95462:intron | 40.0% | |
| ATTTCATAGAGCCTTGCCAA+GGG | - | chr1.3:52640177-52640196 | None:intergenic | 40.0% | |
| CAAGGGGAAAAGCAAGAAAA+AGG | - | chr1.3:52642215-52642234 | None:intergenic | 40.0% | |
| CCTATAGATTCAGCCAAAGT+GGG | - | chr1.3:52643529-52643548 | None:intergenic | 40.0% | |
| CGTCTTCTTCTTCATCAAAG+AGG | + | chr1.3:52642633-52642652 | MS.gene95462:intron | 40.0% | |
| CTGACAGAAAGTGATTATGG+AGG | + | chr1.3:52643099-52643118 | MS.gene95462:intron | 40.0% | |
| CTTCCATTGCCTCATTGAAT+TGG | - | chr1.3:52640276-52640295 | None:intergenic | 40.0% | |
| GAATCATCACACGGAAGTTA+GGG | - | chr1.3:52643453-52643472 | None:intergenic | 40.0% | |
| GATTCACCAATTCACCTGAT+TGG | - | chr1.3:52640920-52640939 | None:intergenic | 40.0% | |
| GCATGGACTCCTTGAAAATA+TGG | + | chr1.3:52642112-52642131 | MS.gene95462:intron | 40.0% | |
| GGGCAAAATCGTAAAAAGCA+CGG | - | chr1.3:52642472-52642491 | None:intergenic | 40.0% | |
| GGGCAAAATGAAGAGAAGTT+AGG | + | chr1.3:52641523-52641542 | MS.gene95462:intron | 40.0% | |
| GTTATGGGTAGCGAATTACT+TGG | + | chr1.3:52642188-52642207 | MS.gene95462:intron | 40.0% | |
| GTTCCTTTCTGTGCTACATT+AGG | + | chr1.3:52644317-52644336 | MS.gene95462:intron | 40.0% | |
| GTTGGAATACAAGTTGTTGC+AGG | + | chr1.3:52642954-52642973 | MS.gene95462:intron | 40.0% | |
| TCACCTAATGTAGCACAGAA+AGG | - | chr1.3:52644323-52644342 | None:intergenic | 40.0% | |
| TCATTAAGGAGTGAACTTGC+TGG | - | chr1.3:52643591-52643610 | None:intergenic | 40.0% | |
| TCCATTGTGCATCGAAAATG+TGG | - | chr1.3:52640942-52640961 | None:intergenic | 40.0% | |
| TGAAACCCGTATTTGTGACA+AGG | + | chr1.3:52643211-52643230 | MS.gene95462:intron | 40.0% | |
| TGAGATCTGAATTGCTGTCA+GGG | + | chr1.3:52641071-52641090 | MS.gene95462:intron | 40.0% | |
| TGATACTACCAGGGCTTATT+GGG | - | chr1.3:52641691-52641710 | None:intergenic | 40.0% | |
| TGGATCATATGCTTGTGCAT+TGG | + | chr1.3:52641661-52641680 | MS.gene95462:intron | 40.0% | |
| TGTTGTTGGTCGAGATAGAA+AGG | + | chr1.3:52643636-52643655 | MS.gene95462:CDS | 40.0% | |
| TTTACTTGCGGATATCTCTG+GGG | + | chr1.3:52642164-52642183 | MS.gene95462:intron | 40.0% | |
| TTTGCTCCTCATCTTTGTTC+TGG | + | chr1.3:52640773-52640792 | MS.gene95462:intron | 40.0% | |
| ! | ACTTCTGTTGTGGTTTTTCC+AGG | + | chr1.3:52640996-52641015 | MS.gene95462:intron | 40.0% |
| ! | ATCACTTGATTCGACGTTAC+AGG | - | chr1.3:52643264-52643283 | None:intergenic | 40.0% |
| ! | CACAGTGATCAATGTTGGTT+TGG | + | chr1.3:52639981-52640000 | MS.gene95462:CDS | 40.0% |
| ! | CATTCAATCTGAGACATGCA+TGG | - | chr1.3:52642689-52642708 | None:intergenic | 40.0% |
| ! | CGTCGTATAATTTGAGATGG+AGG | + | chr1.3:52641979-52641998 | MS.gene95462:intron | 40.0% |
| ! | GTGAGTTCTTACCCTTTTAG+TGG | - | chr1.3:52643239-52643258 | None:intergenic | 40.0% |
| ! | TCAGTGATATTGATTGCTGC+TGG | + | chr1.3:52644348-52644367 | MS.gene95462:CDS | 40.0% |
| ! | TCATTGCTAGCTTGCATGAT+AGG | + | chr1.3:52640363-52640382 | MS.gene95462:intron | 40.0% |
| ! | TCCACATTTTCGATGCACAA+TGG | + | chr1.3:52640938-52640957 | MS.gene95462:intron | 40.0% |
| ! | TTGTAATTAGGCCGCTGATT+GGG | + | chr1.3:52643149-52643168 | MS.gene95462:intron | 40.0% |
| ! | TTTCTGTTTTCTTCCAGGTG+AGG | + | chr1.3:52644432-52644451 | MS.gene95462:CDS | 40.0% |
| !! | TGAAGCTTTAGAAGCTGAGA+AGG | + | chr1.3:52640056-52640075 | MS.gene95462:CDS | 40.0% |
| !! | TGCAAGACCTTTTGGGAAAA+GGG | + | chr1.3:52641441-52641460 | MS.gene95462:intron | 40.0% |
| !! | TTAGGAACACTCTTTGGGAT+TGG | + | chr1.3:52640106-52640125 | MS.gene95462:CDS | 40.0% |
| !!! | GGTGCTGTTTTTGCAATTCT+GGG | + | chr1.3:52640003-52640022 | MS.gene95462:CDS | 40.0% |
| AAACTGGGGCTAATGGTGTA+TGG | + | chr1.3:52643823-52643842 | MS.gene95462:CDS | 45.0% | |
| AAGAAGTGGGACGAGAGAAA+CGG | + | chr1.3:52642574-52642593 | MS.gene95462:intron | 45.0% | |
| AAGGGGGAACAGTGAAAGAA+GGG | + | chr1.3:52642609-52642628 | MS.gene95462:intron | 45.0% | |
| AGGAAAGATGCTAATCCAGC+TGG | + | chr1.3:52641029-52641048 | MS.gene95462:CDS | 45.0% | |
| ATAGCGTGTGGAGTTGTTGT+TGG | + | chr1.3:52643622-52643641 | MS.gene95462:CDS | 45.0% | |
| ATTACATCTGGAGGAGAGAG+CGG | - | chr1.3:52640593-52640612 | None:intergenic | 45.0% | |
| CCCACTTTGGCTGAATCTAT+AGG | + | chr1.3:52643526-52643545 | MS.gene95462:intron | 45.0% | |
| CTGAGATCTGAATTGCTGTC+AGG | + | chr1.3:52641070-52641089 | MS.gene95462:intron | 45.0% | |
| GATGAAGTGAAGCTTCATGG+TGG | - | chr1.3:52641481-52641500 | None:intergenic | 45.0% | |
| GATTATGGAGGATTAGGGCA+AGG | + | chr1.3:52643111-52643130 | MS.gene95462:intron | 45.0% | |
| GGAGATGAAGTGAAGCTTCA+TGG | - | chr1.3:52641484-52641503 | None:intergenic | 45.0% | |
| GTGACAAGGCTCCACTAAAA+GGG | + | chr1.3:52643225-52643244 | MS.gene95462:intron | 45.0% | |
| TGGAAACAAACTGGGGCTAA+TGG | + | chr1.3:52643816-52643835 | MS.gene95462:CDS | 45.0% | |
| TGTGACAAGGCTCCACTAAA+AGG | + | chr1.3:52643224-52643243 | MS.gene95462:intron | 45.0% | |
| TTACCAGGTGCAGATTGTTG+AGG | - | chr1.3:52640219-52640238 | None:intergenic | 45.0% | |
| TTGGAAAACCCAATAAGCCC+TGG | + | chr1.3:52641680-52641699 | MS.gene95462:intron | 45.0% | |
| ! | AACACAAAAGCACAACTCGC+AGG | - | chr1.3:52640422-52640441 | None:intergenic | 45.0% |
| ! | CAAGATTTTGCAGTGGTTGC+AGG | - | chr1.3:52643870-52643889 | None:intergenic | 45.0% |
| ! | CTAGCTTGTATCCCAATCAG+CGG | - | chr1.3:52643163-52643182 | None:intergenic | 45.0% |
| ! | GCATGGCCTTAGATTCAAGA+AGG | - | chr1.3:52642672-52642691 | None:intergenic | 45.0% |
| ! | GGATTAGCATCTTTCCTCAC+AGG | - | chr1.3:52641026-52641045 | None:intergenic | 45.0% |
| ! | GTGGAGCCTTGTCACAAATA+CGG | - | chr1.3:52643220-52643239 | None:intergenic | 45.0% |
| ! | TCATGGTGCACTGAGTTTTG+CGG | + | chr1.3:52643494-52643513 | MS.gene95462:intron | 45.0% |
| ! | TGGAGCCTTGTCACAAATAC+GGG | - | chr1.3:52643219-52643238 | None:intergenic | 45.0% |
| ! | TTTTTCCAGGAGATCCTGTG+AGG | + | chr1.3:52641009-52641028 | MS.gene95462:intron | 45.0% |
| !! | GTGCAAGACCTTTTGGGAAA+AGG | + | chr1.3:52641440-52641459 | MS.gene95462:intron | 45.0% |
| !!! | GGGTGCTGTTTTTGCAATTC+TGG | + | chr1.3:52640002-52640021 | MS.gene95462:CDS | 45.0% |
| AGAAGTGGGACGAGAGAAAC+GGG | + | chr1.3:52642575-52642594 | MS.gene95462:intron | 50.0% | |
| AGATGCTAATCCAGCTGGTC+CGG | + | chr1.3:52641034-52641053 | MS.gene95462:intron | 50.0% | |
| CCACCCATGACTGTGAAACA+TGG | - | chr1.3:52641421-52641440 | None:intergenic | 50.0% | |
| CCATGTTTCACAGTCATGGG+TGG | + | chr1.3:52641418-52641437 | MS.gene95462:intron | 50.0% | |
| GAAGGGGGAACAGTGAAAGA+AGG | + | chr1.3:52642608-52642627 | MS.gene95462:intron | 50.0% | |
| GGAGTTCTCATAGAAGCCCT+TGG | + | chr1.3:52644369-52644388 | MS.gene95462:CDS | 50.0% | |
| GGGCCATGTTTCACAGTCAT+GGG | + | chr1.3:52641415-52641434 | MS.gene95462:intron | 50.0% | |
| TCAGCCAAAGTGGGAAAGTG+AGG | - | chr1.3:52643520-52643539 | None:intergenic | 50.0% | |
| TCTGTTTGAGTCACGACGCA+TGG | + | chr1.3:52642095-52642114 | MS.gene95462:intron | 50.0% | |
| TCTTTCCTCACAGGATCTCC+TGG | - | chr1.3:52641017-52641036 | None:intergenic | 50.0% | |
| TGGGCCATGTTTCACAGTCA+TGG | + | chr1.3:52641414-52641433 | MS.gene95462:intron | 50.0% | |
| ! | AGCGACACCCTTTTCCCAAA+AGG | - | chr1.3:52641451-52641470 | None:intergenic | 50.0% |
| ! | ATGGGTGGTGCAAGACCTTT+TGG | + | chr1.3:52641433-52641452 | MS.gene95462:intron | 50.0% |
| ! | CGCTGATTGGGATACAAGCT+AGG | + | chr1.3:52643161-52643180 | MS.gene95462:intron | 50.0% |
| ! | TGGGTGGTGCAAGACCTTTT+GGG | + | chr1.3:52641434-52641453 | MS.gene95462:intron | 50.0% |
| !! | GGATATCTCTGGGGCGTTAT+GGG | + | chr1.3:52642173-52642192 | MS.gene95462:intron | 50.0% |
| !!! | ATTATTTTGGCCGGACCAGC+TGG | - | chr1.3:52641047-52641066 | None:intergenic | 50.0% |
| AAACGGGAACGGGAGAGGAA+GGG | + | chr1.3:52642591-52642610 | MS.gene95462:intron | 55.0% | |
| AGCCGAATCAGACGCTGCTT+CGG | - | chr1.3:52640148-52640167 | None:intergenic | 55.0% | |
| CCAGGTGCAGATTGTTGAGG+AGG | - | chr1.3:52640216-52640235 | None:intergenic | 55.0% | |
| CCTCCTCAACAATCTGCACC+TGG | + | chr1.3:52640213-52640232 | MS.gene95462:CDS | 55.0% | |
| GATTAGGGCAAGGGCAGAAG+TGG | + | chr1.3:52643121-52643140 | MS.gene95462:intron | 55.0% | |
| TAGAGCCTTGCCAAGGGAAC+TGG | - | chr1.3:52640171-52640190 | None:intergenic | 55.0% | |
| TGCCGAAGCAGCGTCTGATT+CGG | + | chr1.3:52640143-52640162 | MS.gene95462:CDS | 55.0% | |
| TGGGACGAGAGAAACGGGAA+CGG | + | chr1.3:52642580-52642599 | MS.gene95462:intron | 55.0% | |
| ! | TGATTCGGCTCCAGTTCCCT+TGG | + | chr1.3:52640158-52640177 | MS.gene95462:CDS | 55.0% |
| !! | CGGATATCTCTGGGGCGTTA+TGG | + | chr1.3:52642172-52642191 | MS.gene95462:intron | 55.0% |
| AACGGGAACGGGAGAGGAAG+GGG | + | chr1.3:52642592-52642611 | MS.gene95462:intron | 60.0% | |
| GAAACGGGAACGGGAGAGGA+AGG | + | chr1.3:52642590-52642609 | MS.gene95462:intron | 60.0% | |
| GAGAGAAACGGGAACGGGAG+AGG | + | chr1.3:52642586-52642605 | MS.gene95462:intron | 60.0% | |
| GCGGCCTCACTTTCCCACTT+TGG | + | chr1.3:52643513-52643532 | MS.gene95462:intron | 60.0% | |
| GGGACGAGAGAAACGGGAAC+GGG | + | chr1.3:52642581-52642600 | MS.gene95462:intron | 60.0% | |
| ACGGGAACGGGAGAGGAAGG+GGG | + | chr1.3:52642593-52642612 | MS.gene95462:intron | 65.0% | |
| CGGCTCCAGTTCCCTTGGCA+AGG | + | chr1.3:52640163-52640182 | MS.gene95462:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 52639928 | 52644452 | 52639928 | ID=MS.gene95462 |
| chr1.3 | mRNA | 52639928 | 52644452 | 52639928 | ID=MS.gene95462.t1;Parent=MS.gene95462 |
| chr1.3 | exon | 52639928 | 52640234 | 52639928 | ID=MS.gene95462.t1.exon1;Parent=MS.gene95462.t1 |
| chr1.3 | CDS | 52639928 | 52640234 | 52639928 | ID=cds.MS.gene95462.t1;Parent=MS.gene95462.t1 |
| chr1.3 | exon | 52641018 | 52641050 | 52641018 | ID=MS.gene95462.t1.exon2;Parent=MS.gene95462.t1 |
| chr1.3 | CDS | 52641018 | 52641050 | 52641018 | ID=cds.MS.gene95462.t1;Parent=MS.gene95462.t1 |
| chr1.3 | exon | 52643548 | 52643657 | 52643548 | ID=MS.gene95462.t1.exon3;Parent=MS.gene95462.t1 |
| chr1.3 | CDS | 52643548 | 52643657 | 52643548 | ID=cds.MS.gene95462.t1;Parent=MS.gene95462.t1 |
| chr1.3 | exon | 52643759 | 52643947 | 52643759 | ID=MS.gene95462.t1.exon4;Parent=MS.gene95462.t1 |
| chr1.3 | CDS | 52643759 | 52643947 | 52643759 | ID=cds.MS.gene95462.t1;Parent=MS.gene95462.t1 |
| chr1.3 | exon | 52644339 | 52644452 | 52644339 | ID=MS.gene95462.t1.exon5;Parent=MS.gene95462.t1 |
| chr1.3 | CDS | 52644339 | 52644452 | 52644339 | ID=cds.MS.gene95462.t1;Parent=MS.gene95462.t1 |
| Gene Sequence |
| Protein sequence |
