Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95509.t1 | XP_003614096.1 | 97.2 | 400 | 8 | 1 | 1 | 400 | 1 | 397 | 1.20E-213 | 752.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95509.t1 | Q9ZQ89 | 78.2 | 403 | 80 | 3 | 1 | 400 | 1 | 398 | 1.5e-172 | 607.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95509.t1 | G7JY00 | 97.2 | 400 | 8 | 1 | 1 | 400 | 1 | 397 | 8.4e-214 | 752.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054684 | MS.gene95509 | 0.833716 | 4.54E-56 | -1.69E-46 |
| MS.gene054892 | MS.gene95509 | 0.809935 | 1.48E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene95509 | 0.813516 | 2.46E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95509.t1 | MTR_5g044710 | 97.250 | 400 | 8 | 1 | 1 | 400 | 1 | 397 | 0.0 | 790 |
| MS.gene95509.t1 | MTR_5g045530 | 88.337 | 403 | 42 | 3 | 1 | 400 | 1 | 401 | 0.0 | 664 |
| MS.gene95509.t1 | MTR_5g045520 | 82.469 | 405 | 62 | 3 | 1 | 400 | 27 | 427 | 0.0 | 646 |
| MS.gene95509.t1 | MTR_5g045520 | 82.469 | 405 | 62 | 3 | 1 | 400 | 1 | 401 | 0.0 | 645 |
| MS.gene95509.t1 | MTR_5g044710 | 97.231 | 325 | 6 | 1 | 76 | 400 | 2 | 323 | 0.0 | 637 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95509.t1 | AT2G03530 | 78.164 | 403 | 80 | 3 | 1 | 400 | 1 | 398 | 0.0 | 621 |
| MS.gene95509.t1 | AT2G03530 | 78.164 | 403 | 80 | 3 | 1 | 400 | 1 | 398 | 0.0 | 621 |
| MS.gene95509.t1 | AT2G03590 | 76.750 | 400 | 83 | 2 | 1 | 400 | 1 | 390 | 0.0 | 607 |
| MS.gene95509.t1 | AT2G03590 | 76.750 | 400 | 83 | 2 | 1 | 400 | 1 | 390 | 0.0 | 607 |
| MS.gene95509.t1 | AT2G03530 | 77.953 | 381 | 76 | 3 | 1 | 378 | 1 | 376 | 0.0 | 587 |
| MS.gene95509.t1 | AT2G03520 | 68.642 | 405 | 118 | 3 | 1 | 400 | 1 | 401 | 0.0 | 540 |
| MS.gene95509.t1 | AT1G26440 | 67.482 | 409 | 116 | 4 | 1 | 400 | 9 | 409 | 0.0 | 528 |
| MS.gene95509.t1 | AT1G26440 | 67.482 | 409 | 116 | 4 | 1 | 400 | 9 | 409 | 0.0 | 528 |
| MS.gene95509.t1 | AT2G03530 | 77.673 | 318 | 66 | 2 | 83 | 400 | 1 | 313 | 4.01e-170 | 478 |
| MS.gene95509.t1 | AT2G03530 | 77.673 | 318 | 66 | 2 | 83 | 400 | 1 | 313 | 4.01e-170 | 478 |
| MS.gene95509.t1 | AT1G26440 | 61.275 | 408 | 107 | 5 | 1 | 400 | 9 | 373 | 4.80e-163 | 462 |
| MS.gene95509.t1 | AT1G26440 | 61.125 | 409 | 107 | 5 | 1 | 400 | 9 | 374 | 7.06e-163 | 462 |
| MS.gene95509.t1 | AT1G26440 | 67.477 | 329 | 95 | 2 | 76 | 400 | 16 | 336 | 7.97e-153 | 435 |
| MS.gene95509.t1 | AT1G26440 | 67.477 | 329 | 95 | 2 | 76 | 400 | 16 | 336 | 7.97e-153 | 435 |
| MS.gene95509.t1 | AT2G03600 | 63.450 | 342 | 102 | 5 | 1 | 336 | 1 | 325 | 1.14e-147 | 422 |
| MS.gene95509.t1 | AT2G03600 | 62.130 | 338 | 105 | 4 | 1 | 336 | 1 | 317 | 3.67e-143 | 410 |
| MS.gene95509.t1 | AT1G26440 | 55.693 | 404 | 110 | 5 | 1 | 400 | 9 | 347 | 1.31e-135 | 392 |
| MS.gene95509.t1 | AT2G03600 | 70.412 | 267 | 65 | 2 | 1 | 267 | 1 | 253 | 4.90e-133 | 382 |
| MS.gene95509.t1 | AT2G03600 | 70.412 | 267 | 65 | 2 | 1 | 267 | 1 | 253 | 4.90e-133 | 382 |
| MS.gene95509.t1 | AT1G26440 | 59.574 | 329 | 86 | 3 | 76 | 400 | 16 | 301 | 1.52e-127 | 370 |
| MS.gene95509.t1 | AT2G03600 | 64.828 | 290 | 65 | 3 | 1 | 267 | 1 | 276 | 2.62e-127 | 368 |
| MS.gene95509.t1 | AT2G03600 | 66.489 | 188 | 49 | 2 | 83 | 270 | 1 | 174 | 2.59e-79 | 242 |
Find 99 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCACTTGTGAGCACTTTC+TGG | 0.038144 | 5.2:+34989051 | MS.gene95509:CDS |
| GTCATCATTGAAAGCATATT+TGG | 0.114003 | 5.2:+34988751 | MS.gene95509:CDS |
| TGGGAATGGCCTTCAATTTA+TGG | 0.121139 | 5.2:+34988826 | MS.gene95509:CDS |
| GCTGGTCTCCTTTGTGGATT+TGG | 0.175727 | 5.2:+34988806 | MS.gene95509:CDS |
| GCTGGTTTCCTTGTTGTTCT+TGG | 0.192853 | 5.2:+34985469 | MS.gene95509:CDS |
| AGGCAGTATAAACACTTAAA+TGG | 0.211882 | 5.2:-34988643 | None:intergenic |
| CTGGTTTCCTTGTTGTTCTT+GGG | 0.222511 | 5.2:+34985470 | MS.gene95509:CDS |
| GAAGGTGATGTTTAGAATTA+TGG | 0.226281 | 5.2:-34988699 | None:intergenic |
| GGCATAACGACTTGCCTTAA+TGG | 0.249624 | 5.2:-34988242 | None:intergenic |
| GCTTTCACCTTTGGTCAAAT+TGG | 0.256882 | 5.2:+34985596 | MS.gene95509:CDS |
| CTGGTCTCCTTTGTGGATTT+GGG | 0.268069 | 5.2:+34988807 | MS.gene95509:CDS |
| GTTATCATTGCTTTCACCTT+TGG | 0.272469 | 5.2:+34985587 | MS.gene95509:CDS |
| GCTGTGCTCATGGCATCGTC+TGG | 0.280496 | 5.2:+34989164 | MS.gene95509:CDS |
| GCCAGCTGTGATGACTTTAT+TGG | 0.290683 | 5.2:+34985499 | MS.gene95509:CDS |
| ATTCTCACCAGCATTCAATT+TGG | 0.294819 | 5.2:+34988580 | MS.gene95509:CDS |
| TTAGCTATAACTTTCTTTGC+AGG | 0.314773 | 5.2:+34988542 | MS.gene95509:CDS |
| TGAAAGCATATTTGGGAGAT+TGG | 0.323288 | 5.2:+34988759 | MS.gene95509:CDS |
| GGCAGTATAAACACTTAAAT+GGG | 0.325531 | 5.2:-34988642 | None:intergenic |
| TCCACTTGTGAGCACTTTCT+GGG | 0.325696 | 5.2:+34989052 | MS.gene95509:CDS |
| TCAAGTATAACTGTTGTTAT+AGG | 0.331374 | 5.2:+34987228 | MS.gene95509:CDS |
| CCTTGTTGTTCTTGGGGACA+TGG | 0.348148 | 5.2:+34985477 | MS.gene95509:CDS |
| GGGAATGGCCTTCAATTTAT+GGG | 0.348344 | 5.2:+34988827 | MS.gene95509:CDS |
| CTCCTTTGTGGATTTGGGAA+TGG | 0.350731 | 5.2:+34988812 | MS.gene95509:CDS |
| TGAGAAAACAAGATCCATTA+AGG | 0.353091 | 5.2:+34988228 | MS.gene95509:CDS |
| TTCTATTTGCCATGGCTGGT+GGG | 0.356762 | 5.2:+34987127 | MS.gene95509:CDS |
| AAATACTGCAGTTCCTGCTT+TGG | 0.358972 | 5.2:-34988194 | None:intergenic |
| TTGTTGGCTGGTCTCCTTTG+TGG | 0.367617 | 5.2:+34988800 | MS.gene95509:CDS |
| CAGTGGAACACTTTAGATAA+AGG | 0.378993 | 5.2:+34988614 | MS.gene95509:CDS |
| GGAAACCAGCATGCATACTA+TGG | 0.384971 | 5.2:-34985456 | None:intergenic |
| GAAAGCTGAGACAAGAAGTT+AGG | 0.386639 | 5.2:-34985629 | None:intergenic |
| AGTGGAACACTTTAGATAAA+GGG | 0.388576 | 5.2:+34988615 | MS.gene95509:CDS |
| TGGTAGAGGCTGGGCATTGT+TGG | 0.403093 | 5.2:+34988784 | MS.gene95509:CDS |
| TAAAACCATTTGCAGGTGTT+TGG | 0.403739 | 5.2:+34988500 | MS.gene95509:intron |
| CTTCTTGTCTCAGCTTTCTC+AGG | 0.405118 | 5.2:+34985634 | MS.gene95509:CDS |
| TCTGTTCTATTTGCCATGGC+TGG | 0.406796 | 5.2:+34987123 | MS.gene95509:CDS |
| ATTGAATGCTGGTGAGAATA+GGG | 0.408151 | 5.2:-34988576 | None:intergenic |
| AGAGGCTGGGCATTGTTGGC+TGG | 0.411782 | 5.2:+34988788 | MS.gene95509:CDS |
| TATGCTTTCAATGATGACTT+TGG | 0.418427 | 5.2:-34988746 | None:intergenic |
| AATTGAATGCTGGTGAGAAT+AGG | 0.431496 | 5.2:-34988577 | None:intergenic |
| TTTGGAAAGAGCACTTTCAT+TGG | 0.434011 | 5.2:+34988518 | MS.gene95509:CDS |
| TCATCATTGAAAGCATATTT+GGG | 0.434830 | 5.2:+34988752 | MS.gene95509:CDS |
| GCCTTCTGTTCTATTTGCCA+TGG | 0.436677 | 5.2:+34987119 | MS.gene95509:CDS |
| TTTGTCCACTCAGTATGCTT+GGG | 0.439898 | 5.2:+34987170 | MS.gene95509:CDS |
| ATTTGTCCACTCAGTATGCT+TGG | 0.448183 | 5.2:+34987169 | MS.gene95509:CDS |
| TTGGGAGATTGGAATGGTAG+AGG | 0.453584 | 5.2:+34988770 | MS.gene95509:CDS |
| GGTGGGGTTGTCCTTAGCAT+TGG | 0.454459 | 5.2:+34987144 | MS.gene95509:CDS |
| CTACACCATCACTAATCTCT+TGG | 0.456636 | 5.2:+34985559 | MS.gene95509:CDS |
| AGTGATGGTGTAGTCAAGAT+AGG | 0.456695 | 5.2:-34985549 | None:intergenic |
| GACTTTGGTAAGTTCAAGAC+AGG | 0.459110 | 5.2:-34988731 | None:intergenic |
| TTGGAAAGAGCACTTTCATT+GGG | 0.469183 | 5.2:+34988519 | MS.gene95509:CDS |
| GTTCTATTTGCCATGGCTGG+TGG | 0.476128 | 5.2:+34987126 | MS.gene95509:CDS |
| AATGTATATGGTGGAGAGCA+AGG | 0.477899 | 5.2:+34985427 | None:intergenic |
| AGGAGAACATATACACTGCT+TGG | 0.486463 | 5.2:+34989110 | MS.gene95509:CDS |
| TTTATGGGTGGTCAAGCTGC+TGG | 0.489784 | 5.2:+34988842 | MS.gene95509:CDS |
| CTTGACCACCCATAAATTGA+AGG | 0.492169 | 5.2:-34988835 | None:intergenic |
| TCCAATAAAGTCATCACAGC+TGG | 0.498538 | 5.2:-34985500 | None:intergenic |
| AGTTCAAGACAGGGTGGTAA+AGG | 0.499357 | 5.2:-34988721 | None:intergenic |
| TGGTTTCCTTGTTGTTCTTG+GGG | 0.501836 | 5.2:+34985471 | MS.gene95509:CDS |
| CTGTGCTCATGGCATCGTCT+GGG | 0.509473 | 5.2:+34989165 | MS.gene95509:CDS |
| GATTCAAAGGATCTAGAGAA+TGG | 0.510044 | 5.2:+34988157 | MS.gene95509:CDS |
| GAGATTGGAATGGTAGAGGC+TGG | 0.510826 | 5.2:+34988774 | MS.gene95509:CDS |
| GGAGAACATATACACTGCTT+GGG | 0.520576 | 5.2:+34989111 | MS.gene95509:CDS |
| TCTATTTGCCATGGCTGGTG+GGG | 0.531350 | 5.2:+34987128 | MS.gene95509:CDS |
| AGCAGCGGTTGCTGTGCTCA+TGG | 0.535843 | 5.2:+34989154 | MS.gene95509:CDS |
| TTTGTTGCCAAATTGAATGC+TGG | 0.537646 | 5.2:-34988587 | None:intergenic |
| AACATAAACAGATGATTCAA+AGG | 0.542302 | 5.2:+34988144 | MS.gene95509:intron |
| ATCTAATACTGCTGATAACA+AGG | 0.543347 | 5.2:+34987467 | MS.gene95509:CDS |
| CCCCAGAAAGTGCTCACAAG+TGG | 0.548827 | 5.2:-34989053 | None:intergenic |
| CTTTATCTAAAGTGTTCCAC+TGG | 0.550283 | 5.2:-34988613 | None:intergenic |
| AGAGACTGAGAAATAAAAGA+AGG | 0.559930 | 5.2:-34988663 | None:intergenic |
| AGTGCAAACAAAGCCAAAGC+AGG | 0.564487 | 5.2:+34988181 | MS.gene95509:CDS |
| CTGTGATGACTTTATTGGAA+AGG | 0.567287 | 5.2:+34985504 | MS.gene95509:CDS |
| CCACTTGTGAGCACTTTCTG+GGG | 0.568469 | 5.2:+34989053 | MS.gene95509:CDS |
| TGGACAAATTTCCAATGCTA+AGG | 0.572809 | 5.2:-34987155 | None:intergenic |
| AAGGACAACCCCACCAGCCA+TGG | 0.574097 | 5.2:-34987136 | None:intergenic |
| GCATATTTGGGAGATTGGAA+TGG | 0.575169 | 5.2:+34988764 | MS.gene95509:CDS |
| GCCATGGCAAATAGAACAGA+AGG | 0.577335 | 5.2:-34987120 | None:intergenic |
| ATGTATATGGTGGAGAGCAA+GGG | 0.579654 | 5.2:+34985428 | MS.gene95509:CDS |
| ATCAGTGCCAATTTGACCAA+AGG | 0.592220 | 5.2:-34985603 | None:intergenic |
| GTGGAACACTTTAGATAAAG+GGG | 0.598850 | 5.2:+34988616 | MS.gene95509:CDS |
| CAAGACAGGGTGGTAAAGGA+AGG | 0.602138 | 5.2:-34988717 | None:intergenic |
| GTTGCTTATGTTCATAGCAG+CGG | 0.608781 | 5.2:+34989139 | MS.gene95509:CDS |
| AGATTGGAATGGTAGAGGCT+GGG | 0.609712 | 5.2:+34988775 | MS.gene95509:CDS |
| AGGTGCCATAGTATGCATGC+TGG | 0.613318 | 5.2:+34985451 | MS.gene95509:CDS |
| GTGAGTATAGAAAATCATCA+AGG | 0.624685 | 5.2:+34989090 | MS.gene95509:CDS |
| AGCAGCCAAGAGATTAGTGA+TGG | 0.628687 | 5.2:-34985564 | None:intergenic |
| TGATAACAAGGCTAAGCTCA+AGG | 0.632197 | 5.2:+34987479 | MS.gene95509:CDS |
| ATGACTTTATTGGAAAGGAG+AGG | 0.632269 | 5.2:+34985509 | MS.gene95509:CDS |
| CCATGTCCCCAAGAACAACA+AGG | 0.634994 | 5.2:-34985477 | None:intergenic |
| AATGGCCTTCAATTTATGGG+TGG | 0.641282 | 5.2:+34988830 | MS.gene95509:CDS |
| TATATGGTGGAGAGCAAGGG+AGG | 0.646098 | 5.2:+34985431 | MS.gene95509:CDS |
| ATTTGGCAACAAATGACCAG+TGG | 0.650978 | 5.2:+34988597 | MS.gene95509:CDS |
| ACTTTGAATGAAGAAAGTAA+AGG | 0.657392 | 5.2:+34988049 | MS.gene95509:CDS |
| GGCCATTCCCAAATCCACAA+AGG | 0.662272 | 5.2:-34988814 | None:intergenic |
| TAGTCAAGATAGGTGTGCTG+AGG | 0.663042 | 5.2:-34985539 | None:intergenic |
| GCAGTATAAACACTTAAATG+GGG | 0.664993 | 5.2:-34988641 | None:intergenic |
| AAAAGCCCAAGCATACTGAG+TGG | 0.720310 | 5.2:-34987175 | None:intergenic |
| TTGGTAAGTTCAAGACAGGG+TGG | 0.721147 | 5.2:-34988727 | None:intergenic |
| ACTTTGGTAAGTTCAAGACA+GGG | 0.729421 | 5.2:-34988730 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTAGAATTTAAATGAT+GGG | - | chr5.2:34986146-34986165 | None:intergenic | 10.0% |
| !!! | GATTTTTCATTTTTTTAATT+GGG | - | chr5.2:34986233-34986252 | None:intergenic | 10.0% |
| !!! | TGATTTTTCATTTTTTTAAT+TGG | - | chr5.2:34986234-34986253 | None:intergenic | 10.0% |
| !!! | TTTTATTAGAATTTAAATGA+TGG | - | chr5.2:34986147-34986166 | None:intergenic | 10.0% |
| !! | ATAATTCCTAGAAAAAAAAT+TGG | - | chr5.2:34986857-34986876 | None:intergenic | 15.0% |
| !! | TGAAAAAATAAGAAAGAAAT+GGG | - | chr5.2:34985970-34985989 | None:intergenic | 15.0% |
| !! | TTGAAAAAATAAGAAAGAAA+TGG | - | chr5.2:34985971-34985990 | None:intergenic | 15.0% |
| !!! | AATATTTTAAACGATAAAAG+AGG | + | chr5.2:34986021-34986040 | MS.gene95509:intron | 15.0% |
| !!! | GTATTTAACTTTAAAGAAAA+TGG | + | chr5.2:34986197-34986216 | MS.gene95509:intron | 15.0% |
| !!! | TTTTCTATGTTTATTCTAAA+GGG | + | chr5.2:34985674-34985693 | MS.gene95509:intron | 15.0% |
| !! | CATCTGTTTATGTTAATAAA+GGG | - | chr5.2:34988138-34988157 | None:intergenic | 20.0% |
| !! | TAGTTTCGAATAAATATATG+AGG | - | chr5.2:34987949-34987968 | None:intergenic | 20.0% |
| !! | TCACAATCACAAATAAAAAA+TGG | + | chr5.2:34986939-34986958 | MS.gene95509:intron | 20.0% |
| !! | TCATCTGTTTATGTTAATAA+AGG | - | chr5.2:34988139-34988158 | None:intergenic | 20.0% |
| !! | TCTAAATTACTTTGGTTAAT+TGG | + | chr5.2:34987798-34987817 | MS.gene95509:intron | 20.0% |
| !!! | AAAATATGTTATTTTTCCAG+GGG | + | chr5.2:34988013-34988032 | MS.gene95509:intron | 20.0% |
| !!! | AGTTGGTTTTTTAAATGTAA+AGG | - | chr5.2:34986828-34986847 | None:intergenic | 20.0% |
| !!! | CAAAATATGTTATTTTTCCA+GGG | + | chr5.2:34988012-34988031 | MS.gene95509:intron | 20.0% |
| !!! | CACAACATTGAATTATTTTT+TGG | + | chr5.2:34987359-34987378 | MS.gene95509:CDS | 20.0% |
| !!! | CTTTTCTATGTTTATTCTAA+AGG | + | chr5.2:34985673-34985692 | MS.gene95509:intron | 20.0% |
| !!! | GATTTTGTTCTAAATTACTT+TGG | + | chr5.2:34987790-34987809 | MS.gene95509:intron | 20.0% |
| !!! | TAGATGATATTTTTAGTCAT+GGG | + | chr5.2:34985750-34985769 | MS.gene95509:intron | 20.0% |
| !!! | TTAGATGATATTTTTAGTCA+TGG | + | chr5.2:34985749-34985768 | MS.gene95509:intron | 20.0% |
| ! | AAAGTAAAGGTAACAATACT+TGG | + | chr5.2:34988062-34988081 | MS.gene95509:intron | 25.0% |
| ! | AACATAAACAGATGATTCAA+AGG | + | chr5.2:34988144-34988163 | MS.gene95509:intron | 25.0% |
| ! | AACTATGATTTAGACAATGA+CGG | + | chr5.2:34988452-34988471 | MS.gene95509:intron | 25.0% |
| ! | AATATATGAGGATTAATACG+CGG | - | chr5.2:34987937-34987956 | None:intergenic | 25.0% |
| ! | ACTTTGAATGAAGAAAGTAA+AGG | + | chr5.2:34988049-34988068 | MS.gene95509:CDS | 25.0% |
| ! | CTCTTATTAGAAGATACAAA+AGG | + | chr5.2:34986389-34986408 | MS.gene95509:intron | 25.0% |
| ! | TACTAAGTCCAAAATATGAT+TGG | - | chr5.2:34987683-34987702 | None:intergenic | 25.0% |
| ! | TATGAAAATGTGCAGAAATT+AGG | - | chr5.2:34987576-34987595 | None:intergenic | 25.0% |
| ! | TCAAGTATAACTGTTGTTAT+AGG | + | chr5.2:34987228-34987247 | MS.gene95509:CDS | 25.0% |
| ! | TGAAAAATCATTCAACTTGT+AGG | + | chr5.2:34986244-34986263 | MS.gene95509:intron | 25.0% |
| ! | TGCTTATATTTAAGTCCAAA+TGG | - | chr5.2:34988981-34989000 | None:intergenic | 25.0% |
| ! | TTTGCATTCAAACTCTTATT+TGG | - | chr5.2:34985862-34985881 | None:intergenic | 25.0% |
| !! | ACTTTGTATGATAATGTATG+GGG | - | chr5.2:34986589-34986608 | None:intergenic | 25.0% |
| !! | AGACTTTGTATGATAATGTA+TGG | - | chr5.2:34986591-34986610 | None:intergenic | 25.0% |
| !! | CCTGGAAAAATAACATATTT+TGG | - | chr5.2:34988014-34988033 | None:intergenic | 25.0% |
| !! | GAAACTAAACTTTCTCTTTT+TGG | - | chr5.2:34987614-34987633 | None:intergenic | 25.0% |
| !! | GACTTTGTATGATAATGTAT+GGG | - | chr5.2:34986590-34986609 | None:intergenic | 25.0% |
| !! | GCAAAAATGTACGTATATTT+TGG | + | chr5.2:34988998-34989017 | MS.gene95509:intron | 25.0% |
| !! | TATGTGTTGACATGAAAAAA+AGG | - | chr5.2:34988907-34988926 | None:intergenic | 25.0% |
| !! | TCATCATTGAAAGCATATTT+GGG | + | chr5.2:34988752-34988771 | MS.gene95509:CDS | 25.0% |
| !! | TTTTAAATGTAAAGGCTTCA+TGG | - | chr5.2:34986820-34986839 | None:intergenic | 25.0% |
| !!! | AAATATGTTATTTTTCCAGG+GGG | + | chr5.2:34988014-34988033 | MS.gene95509:intron | 25.0% |
| !!! | ACGATTGTAGTTTTAAACTT+TGG | - | chr5.2:34988316-34988335 | None:intergenic | 25.0% |
| !!! | ACGTATATTTTGGTATTTGA+AGG | + | chr5.2:34989008-34989027 | MS.gene95509:intron | 25.0% |
| !!! | CCAAAATATGTTATTTTTCC+AGG | + | chr5.2:34988011-34988030 | MS.gene95509:intron | 25.0% |
| !!! | TTTTCTGAGATTGTCTTAAA+TGG | + | chr5.2:34988092-34988111 | MS.gene95509:intron | 25.0% |
| AAAAAAATTGGAGAGTGAGT+TGG | - | chr5.2:34986845-34986864 | None:intergenic | 30.0% | |
| AAAATCATTCAACTTGTAGG+AGG | + | chr5.2:34986247-34986266 | MS.gene95509:intron | 30.0% | |
| AAGTTGTTTACCTTAGTTAC+TGG | - | chr5.2:34986678-34986697 | None:intergenic | 30.0% | |
| AATTCAGCAGAATTCAATAC+TGG | - | chr5.2:34987316-34987335 | None:intergenic | 30.0% | |
| AGAGACTGAGAAATAAAAGA+AGG | - | chr5.2:34988666-34988685 | None:intergenic | 30.0% | |
| AGGCAGTATAAACACTTAAA+TGG | - | chr5.2:34988646-34988665 | None:intergenic | 30.0% | |
| AGTGGAACACTTTAGATAAA+GGG | + | chr5.2:34988615-34988634 | MS.gene95509:CDS | 30.0% | |
| AGTTGTTTACCTTAGTTACT+GGG | - | chr5.2:34986677-34986696 | None:intergenic | 30.0% | |
| ATATATGAGGATTAATACGC+GGG | - | chr5.2:34987936-34987955 | None:intergenic | 30.0% | |
| ATCTAATACTGCTGATAACA+AGG | + | chr5.2:34987467-34987486 | MS.gene95509:CDS | 30.0% | |
| GCAGTATAAACACTTAAATG+GGG | - | chr5.2:34988644-34988663 | None:intergenic | 30.0% | |
| GGCAGTATAAACACTTAAAT+GGG | - | chr5.2:34988645-34988664 | None:intergenic | 30.0% | |
| GGTTATGCAAATAAAGAAAG+AGG | - | chr5.2:34986496-34986515 | None:intergenic | 30.0% | |
| GTGAGTATAGAAAATCATCA+AGG | + | chr5.2:34989090-34989109 | MS.gene95509:CDS | 30.0% | |
| TATAGTTTGAGCCAAAAAAC+AGG | - | chr5.2:34985838-34985857 | None:intergenic | 30.0% | |
| TATGCTTTCAATGATGACTT+TGG | - | chr5.2:34988749-34988768 | None:intergenic | 30.0% | |
| TGAGAAAACAAGATCCATTA+AGG | + | chr5.2:34988228-34988247 | MS.gene95509:CDS | 30.0% | |
| TGTATAAATTCTCCTCATGA+AGG | - | chr5.2:34988936-34988955 | None:intergenic | 30.0% | |
| TGTTCGTGAAAATTTCAATG+AGG | - | chr5.2:34988266-34988285 | None:intergenic | 30.0% | |
| TTAGCTATAACTTTCTTTGC+AGG | + | chr5.2:34988542-34988561 | MS.gene95509:CDS | 30.0% | |
| ! | ACTAAACTTTCTCTTTTTGG+AGG | - | chr5.2:34987611-34987630 | None:intergenic | 30.0% |
| ! | GAAGCAGTTTCTTATCTTTT+TGG | - | chr5.2:34987768-34987787 | None:intergenic | 30.0% |
| ! | GAAGGTGATGTTTAGAATTA+TGG | - | chr5.2:34988702-34988721 | None:intergenic | 30.0% |
| ! | GATCTCAACCAATCATATTT+TGG | + | chr5.2:34987672-34987691 | MS.gene95509:intron | 30.0% |
| ! | GTCATCATTGAAAGCATATT+TGG | + | chr5.2:34988751-34988770 | MS.gene95509:CDS | 30.0% |
| ! | GTTTATTCTAAAGGGAAAGA+GGG | + | chr5.2:34985682-34985701 | MS.gene95509:intron | 30.0% |
| ! | TGTTAATAAAGGGCATGAAT+AGG | - | chr5.2:34988128-34988147 | None:intergenic | 30.0% |
| ! | TGTTTATTCTAAAGGGAAAG+AGG | + | chr5.2:34985681-34985700 | MS.gene95509:intron | 30.0% |
| ! | TTTTACTCAGATACTCCATT+TGG | + | chr5.2:34988963-34988982 | MS.gene95509:intron | 30.0% |
| ! | TTTTCCACTTTCTTCTTTGT+GGG | + | chr5.2:34985928-34985947 | MS.gene95509:intron | 30.0% |
| ! | TTTTTCCACTTTCTTCTTTG+TGG | + | chr5.2:34985927-34985946 | MS.gene95509:intron | 30.0% |
| !! | ATAAGAAAGAAATGGGTTGA+TGG | - | chr5.2:34985963-34985982 | None:intergenic | 30.0% |
| !!! | CACTCTCCAATTTTTTTTCT+AGG | + | chr5.2:34986848-34986867 | MS.gene95509:intron | 30.0% |
| !!! | TTTTTGGTTGCAGTTTGTTT+AGG | + | chr5.2:34987429-34987448 | MS.gene95509:CDS | 30.0% |
| AAATTCTCCTCATGAAGGAA+AGG | - | chr5.2:34988931-34988950 | None:intergenic | 35.0% | |
| AACCTTGTTCAATTTGTCAC+AGG | + | chr5.2:34987336-34987355 | MS.gene95509:intron | 35.0% | |
| AATTGAATGCTGGTGAGAAT+AGG | - | chr5.2:34988580-34988599 | None:intergenic | 35.0% | |
| ACGCGGGTATAAATTAGAAA+TGG | - | chr5.2:34987920-34987939 | None:intergenic | 35.0% | |
| ACTTTGGTAAGTTCAAGACA+GGG | - | chr5.2:34988733-34988752 | None:intergenic | 35.0% | |
| ATGACTTTATTGGAAAGGAG+AGG | + | chr5.2:34985509-34985528 | MS.gene95509:CDS | 35.0% | |
| ATTCTCACCAGCATTCAATT+TGG | + | chr5.2:34988580-34988599 | MS.gene95509:CDS | 35.0% | |
| ATTGAATGCTGGTGAGAATA+GGG | - | chr5.2:34988579-34988598 | None:intergenic | 35.0% | |
| CAGTGGAACACTTTAGATAA+AGG | + | chr5.2:34988614-34988633 | MS.gene95509:CDS | 35.0% | |
| CTGTGATGACTTTATTGGAA+AGG | + | chr5.2:34985504-34985523 | MS.gene95509:CDS | 35.0% | |
| GATTCAAAGGATCTAGAGAA+TGG | + | chr5.2:34988157-34988176 | MS.gene95509:CDS | 35.0% | |
| GTGATCAAGTAAGTGTTTCT+CGG | - | chr5.2:34986923-34986942 | None:intergenic | 35.0% | |
| GTGGAACACTTTAGATAAAG+GGG | + | chr5.2:34988616-34988635 | MS.gene95509:CDS | 35.0% | |
| GTTATCATTGCTTTCACCTT+TGG | + | chr5.2:34985587-34985606 | MS.gene95509:CDS | 35.0% | |
| GTTGTTTACCTTAGTTACTG+GGG | - | chr5.2:34986676-34986695 | None:intergenic | 35.0% | |
| TAAAACCATTTGCAGGTGTT+TGG | + | chr5.2:34988500-34988519 | MS.gene95509:intron | 35.0% | |
| TAGAGAAATGCAGACAAACA+TGG | + | chr5.2:34988363-34988382 | MS.gene95509:intron | 35.0% | |
| TCTTGTGTAAAACCATTTGC+AGG | + | chr5.2:34988493-34988512 | MS.gene95509:intron | 35.0% | |
| TGACAAAGAGAATCCAAAAC+AGG | + | chr5.2:34985904-34985923 | MS.gene95509:intron | 35.0% | |
| TGATCAAGTAAGTGTTTCTC+GGG | - | chr5.2:34986922-34986941 | None:intergenic | 35.0% | |
| TGGACAAATTTCCAATGCTA+AGG | - | chr5.2:34987158-34987177 | None:intergenic | 35.0% | |
| TTGTTTACCTTAGTTACTGG+GGG | - | chr5.2:34986675-34986694 | None:intergenic | 35.0% | |
| TTTGTTGCCAAATTGAATGC+TGG | - | chr5.2:34988590-34988609 | None:intergenic | 35.0% | |
| ! | AAAGCTGAGATTCTTTTTCC+AGG | + | chr5.2:34987396-34987415 | MS.gene95509:CDS | 35.0% |
| ! | ATGATAATGTATGGGGTTGT+GGG | - | chr5.2:34986582-34986601 | None:intergenic | 35.0% |
| ! | CATGGGAGAGCATAAATAAT+AGG | + | chr5.2:34985767-34985786 | MS.gene95509:intron | 35.0% |
| ! | CTTTATCTAAAGTGTTCCAC+TGG | - | chr5.2:34988616-34988635 | None:intergenic | 35.0% |
| ! | GAAAGTGGAAAAACCTGTTT+TGG | - | chr5.2:34985920-34985939 | None:intergenic | 35.0% |
| ! | TATGATAATGTATGGGGTTG+TGG | - | chr5.2:34986583-34986602 | None:intergenic | 35.0% |
| ! | TGAAAGCATATTTGGGAGAT+TGG | + | chr5.2:34988759-34988778 | MS.gene95509:CDS | 35.0% |
| !! | AAACTTTCTCTTTTTGGAGG+TGG | - | chr5.2:34987608-34987627 | None:intergenic | 35.0% |
| !! | CACTTAGTGAAATTGACTTG+AGG | - | chr5.2:34986120-34986139 | None:intergenic | 35.0% |
| !! | TAAAGCACCTATTTCTGTAC+CGG | + | chr5.2:34986701-34986720 | MS.gene95509:intron | 35.0% |
| !! | TTGGAAAGAGCACTTTCATT+GGG | + | chr5.2:34988519-34988538 | MS.gene95509:CDS | 35.0% |
| !! | TTTGGAAAGAGCACTTTCAT+TGG | + | chr5.2:34988518-34988537 | MS.gene95509:CDS | 35.0% |
| !!! | TACTTCATCCACCTGTTTTT+TGG | + | chr5.2:34985824-34985843 | MS.gene95509:intron | 35.0% |
| AAATACTGCAGTTCCTGCTT+TGG | - | chr5.2:34988197-34988216 | None:intergenic | 40.0% | |
| AATGGCCTTCAATTTATGGG+TGG | + | chr5.2:34988830-34988849 | MS.gene95509:CDS | 40.0% | |
| AGGAGAACATATACACTGCT+TGG | + | chr5.2:34989110-34989129 | MS.gene95509:CDS | 40.0% | |
| AGTTTGAGCCAAAAAACAGG+TGG | - | chr5.2:34985835-34985854 | None:intergenic | 40.0% | |
| ATCAGTGCCAATTTGACCAA+AGG | - | chr5.2:34985606-34985625 | None:intergenic | 40.0% | |
| ATCATTCAACTTGTAGGAGG+AGG | + | chr5.2:34986250-34986269 | MS.gene95509:intron | 40.0% | |
| ATGACCCACAAAGAAGAAAG+TGG | - | chr5.2:34985935-34985954 | None:intergenic | 40.0% | |
| ATTTCAGGGAAGACCTATGT+GGG | - | chr5.2:34986652-34986671 | None:intergenic | 40.0% | |
| ATTTGGCAACAAATGACCAG+TGG | + | chr5.2:34988597-34988616 | MS.gene95509:CDS | 40.0% | |
| ATTTGTCCACTCAGTATGCT+TGG | + | chr5.2:34987169-34987188 | MS.gene95509:CDS | 40.0% | |
| CACATAACCTTTCCTTCATG+AGG | + | chr5.2:34988921-34988940 | MS.gene95509:intron | 40.0% | |
| CTACACCATCACTAATCTCT+TGG | + | chr5.2:34985559-34985578 | MS.gene95509:CDS | 40.0% | |
| CTTGACCACCCATAAATTGA+AGG | - | chr5.2:34988838-34988857 | None:intergenic | 40.0% | |
| GAAAGCTGAGACAAGAAGTT+AGG | - | chr5.2:34985632-34985651 | None:intergenic | 40.0% | |
| GAATGTGTGATGTTTGATGC+AGG | + | chr5.2:34987089-34987108 | MS.gene95509:intron | 40.0% | |
| GACTTTGGTAAGTTCAAGAC+AGG | - | chr5.2:34988734-34988753 | None:intergenic | 40.0% | |
| GCATATTTGGGAGATTGGAA+TGG | + | chr5.2:34988764-34988783 | MS.gene95509:CDS | 40.0% | |
| GCTTTCACCTTTGGTCAAAT+TGG | + | chr5.2:34985596-34985615 | MS.gene95509:CDS | 40.0% | |
| GGAGAACATATACACTGCTT+GGG | + | chr5.2:34989111-34989130 | MS.gene95509:CDS | 40.0% | |
| GGGAATGGCCTTCAATTTAT+GGG | + | chr5.2:34988827-34988846 | MS.gene95509:CDS | 40.0% | |
| GGGTACATAGAGATAGAAGA+GGG | - | chr5.2:34986902-34986921 | None:intergenic | 40.0% | |
| GGTACATAGAGATAGAAGAG+GGG | - | chr5.2:34986901-34986920 | None:intergenic | 40.0% | |
| GTTGCTTATGTTCATAGCAG+CGG | + | chr5.2:34989139-34989158 | MS.gene95509:CDS | 40.0% | |
| TCCAATAAAGTCATCACAGC+TGG | - | chr5.2:34985503-34985522 | None:intergenic | 40.0% | |
| TCTATTACCTTCCGAAGTAG+CGG | + | chr5.2:34986608-34986627 | MS.gene95509:intron | 40.0% | |
| TCTTTCCAAACACCTGCAAA+TGG | - | chr5.2:34988508-34988527 | None:intergenic | 40.0% | |
| TGATAACAAGGCTAAGCTCA+AGG | + | chr5.2:34987479-34987498 | MS.gene95509:CDS | 40.0% | |
| TGCCTGTGACAAATTGAACA+AGG | - | chr5.2:34987341-34987360 | None:intergenic | 40.0% | |
| TGGGAATGGCCTTCAATTTA+TGG | + | chr5.2:34988826-34988845 | MS.gene95509:CDS | 40.0% | |
| TTAGTTACTGGGGGATTTCA+GGG | - | chr5.2:34986666-34986685 | None:intergenic | 40.0% | |
| TTTGTCCACTCAGTATGCTT+GGG | + | chr5.2:34987170-34987189 | MS.gene95509:CDS | 40.0% | |
| ! | AGTGATGGTGTAGTCAAGAT+AGG | - | chr5.2:34985552-34985571 | None:intergenic | 40.0% |
| ! | ATGTATATGGTGGAGAGCAA+GGG | + | chr5.2:34985428-34985447 | MS.gene95509:CDS | 40.0% |
| ! | GAGATTCTTTTTCCAGGAGT+TGG | + | chr5.2:34987402-34987421 | MS.gene95509:CDS | 40.0% |
| !! | CTGGTTTCCTTGTTGTTCTT+GGG | + | chr5.2:34985470-34985489 | MS.gene95509:CDS | 40.0% |
| !! | TGGTTTCCTTGTTGTTCTTG+GGG | + | chr5.2:34985471-34985490 | MS.gene95509:CDS | 40.0% |
| AAAAGCCCAAGCATACTGAG+TGG | - | chr5.2:34987178-34987197 | None:intergenic | 45.0% | |
| ACCAAAAAGCAACCAACTCC+TGG | - | chr5.2:34987417-34987436 | None:intergenic | 45.0% | |
| AGACGAACAGGGACGTTAAT+TGG | + | chr5.2:34987873-34987892 | MS.gene95509:intron | 45.0% | |
| AGATTGGAATGGTAGAGGCT+GGG | + | chr5.2:34988775-34988794 | MS.gene95509:CDS | 45.0% | |
| AGCAGCCAAGAGATTAGTGA+TGG | - | chr5.2:34985567-34985586 | None:intergenic | 45.0% | |
| AGTCTCTGTACAAGACGAAC+AGG | + | chr5.2:34987861-34987880 | MS.gene95509:intron | 45.0% | |
| AGTGCAAACAAAGCCAAAGC+AGG | + | chr5.2:34988181-34988200 | MS.gene95509:CDS | 45.0% | |
| AGTTCAAGACAGGGTGGTAA+AGG | - | chr5.2:34988724-34988743 | None:intergenic | 45.0% | |
| ATCACACACAACAACAGGCA+TGG | + | chr5.2:34986520-34986539 | MS.gene95509:intron | 45.0% | |
| CGGGTACATAGAGATAGAAG+AGG | - | chr5.2:34986903-34986922 | None:intergenic | 45.0% | |
| CTATTACCTTCCGAAGTAGC+GGG | + | chr5.2:34986609-34986628 | MS.gene95509:intron | 45.0% | |
| CTCCTTTGTGGATTTGGGAA+TGG | + | chr5.2:34988812-34988831 | MS.gene95509:CDS | 45.0% | |
| CTGAAATCCCCCAGTAACTA+AGG | + | chr5.2:34986665-34986684 | MS.gene95509:intron | 45.0% | |
| CTGGTCTCCTTTGTGGATTT+GGG | + | chr5.2:34988807-34988826 | MS.gene95509:CDS | 45.0% | |
| CTTAGTTACTGGGGGATTTC+AGG | - | chr5.2:34986667-34986686 | None:intergenic | 45.0% | |
| CTTCTTGTCTCAGCTTTCTC+AGG | + | chr5.2:34985634-34985653 | MS.gene95509:CDS | 45.0% | |
| GATTTCAGGGAAGACCTATG+TGG | - | chr5.2:34986653-34986672 | None:intergenic | 45.0% | |
| GCCAGCTGTGATGACTTTAT+TGG | + | chr5.2:34985499-34985518 | MS.gene95509:CDS | 45.0% | |
| GCCATGGCAAATAGAACAGA+AGG | - | chr5.2:34987123-34987142 | None:intergenic | 45.0% | |
| GCCTTCTGTTCTATTTGCCA+TGG | + | chr5.2:34987119-34987138 | MS.gene95509:CDS | 45.0% | |
| GGAAACCAGCATGCATACTA+TGG | - | chr5.2:34985459-34985478 | None:intergenic | 45.0% | |
| GGCATAACGACTTGCCTTAA+TGG | - | chr5.2:34988245-34988264 | None:intergenic | 45.0% | |
| GGTATCAGAGCTAGGTTACT+TGG | - | chr5.2:34986422-34986441 | None:intergenic | 45.0% | |
| GTCTCTGTACAAGACGAACA+GGG | + | chr5.2:34987862-34987881 | MS.gene95509:intron | 45.0% | |
| GTTCGTCTTGTACAGAGACT+TGG | - | chr5.2:34987861-34987880 | None:intergenic | 45.0% | |
| TAGTCAAGATAGGTGTGCTG+AGG | - | chr5.2:34985542-34985561 | None:intergenic | 45.0% | |
| TCCACTTGTGAGCACTTTCT+GGG | + | chr5.2:34989052-34989071 | MS.gene95509:CDS | 45.0% | |
| TCTGTTCTATTTGCCATGGC+TGG | + | chr5.2:34987123-34987142 | MS.gene95509:CDS | 45.0% | |
| TGACAAGTGGTATCAGAGCT+AGG | - | chr5.2:34986430-34986449 | None:intergenic | 45.0% | |
| TTCCACTTGTGAGCACTTTC+TGG | + | chr5.2:34989051-34989070 | MS.gene95509:CDS | 45.0% | |
| TTCCGGAAGAGCGATGAAAA+AGG | + | chr5.2:34986724-34986743 | MS.gene95509:intron | 45.0% | |
| TTCTATTTGCCATGGCTGGT+GGG | + | chr5.2:34987127-34987146 | MS.gene95509:CDS | 45.0% | |
| TTGGGAGATTGGAATGGTAG+AGG | + | chr5.2:34988770-34988789 | MS.gene95509:CDS | 45.0% | |
| TTGGTAAGTTCAAGACAGGG+TGG | - | chr5.2:34988730-34988749 | None:intergenic | 45.0% | |
| TTGTCTCAGCTTTCTCAGGT+AGG | + | chr5.2:34985638-34985657 | MS.gene95509:intron | 45.0% | |
| ! | ACCTATGTGGGACACCTTTT+GGG | - | chr5.2:34986640-34986659 | None:intergenic | 45.0% |
| ! | AGCTCTGATACCACTTGTCA+CGG | + | chr5.2:34986430-34986449 | MS.gene95509:intron | 45.0% |
| ! | AGTAGATAGATTAGTCCCCC+TGG | - | chr5.2:34988032-34988051 | None:intergenic | 45.0% |
| ! | CAGTATGCTTGGGCTTTTGT+TGG | + | chr5.2:34987180-34987199 | MS.gene95509:CDS | 45.0% |
| !! | ACCTATTTCTGTACCGGTTC+CGG | + | chr5.2:34986707-34986726 | MS.gene95509:intron | 45.0% |
| !! | CTCCTTTTTCATCGCTCTTC+CGG | - | chr5.2:34986729-34986748 | None:intergenic | 45.0% |
| !! | GCTGGTTTCCTTGTTGTTCT+TGG | + | chr5.2:34985469-34985488 | MS.gene95509:CDS | 45.0% |
| !! | TGAAGGAGTGTTGTTTGTGC+AGG | + | chr5.2:34989025-34989044 | MS.gene95509:intron | 45.0% |
| !!! | TCCAGGAGTTGGTTGCTTTT+TGG | + | chr5.2:34987413-34987432 | MS.gene95509:CDS | 45.0% |
| !!! | TTCTGGGGCGTTGTTTTGTT+CGG | + | chr5.2:34989068-34989087 | MS.gene95509:CDS | 45.0% |
| !!! | TAAAATATTTTAATACAAAT+AGG | - | chr5.2:34986010-34986029 | None:intergenic | 5.0% |
| CAAGACAGGGTGGTAAAGGA+AGG | - | chr5.2:34988720-34988739 | None:intergenic | 50.0% | |
| CACTCCGCTTTCTAACGCAA+CGG | + | chr5.2:34986459-34986478 | MS.gene95509:intron | 50.0% | |
| CCACTTGTGAGCACTTTCTG+GGG | + | chr5.2:34989053-34989072 | MS.gene95509:CDS | 50.0% | |
| CCATGTCCCCAAGAACAACA+AGG | - | chr5.2:34985480-34985499 | None:intergenic | 50.0% | |
| CTCGCATATGGGTAGCAAGA+GGG | - | chr5.2:34986333-34986352 | None:intergenic | 50.0% | |
| CTCGCATCACACACAACAAC+AGG | + | chr5.2:34986515-34986534 | MS.gene95509:intron | 50.0% | |
| CTGTTGTTGTGTGTGATGCG+AGG | - | chr5.2:34986517-34986536 | None:intergenic | 50.0% | |
| GAGAGAGTGAATCCTCGTCA+AGG | - | chr5.2:34986372-34986391 | None:intergenic | 50.0% | |
| GAGATTGGAATGGTAGAGGC+TGG | + | chr5.2:34988774-34988793 | MS.gene95509:CDS | 50.0% | |
| GAGTGAATCCTCGTCAAGGA+AGG | - | chr5.2:34986368-34986387 | None:intergenic | 50.0% | |
| GGCCATTCCCAAATCCACAA+AGG | - | chr5.2:34988817-34988836 | None:intergenic | 50.0% | |
| GTTCTATTTGCCATGGCTGG+TGG | + | chr5.2:34987126-34987145 | MS.gene95509:CDS | 50.0% | |
| TAAGACAGCGCCTCGCATAT+GGG | - | chr5.2:34986344-34986363 | None:intergenic | 50.0% | |
| TCCGGAACCGGTACAGAAAT+AGG | - | chr5.2:34986711-34986730 | None:intergenic | 50.0% | |
| TCTATTTGCCATGGCTGGTG+GGG | + | chr5.2:34987128-34987147 | MS.gene95509:CDS | 50.0% | |
| TTTATGGGTGGTCAAGCTGC+TGG | + | chr5.2:34988842-34988861 | MS.gene95509:CDS | 50.0% | |
| TTTCATCGCTCTTCCGGAAC+CGG | - | chr5.2:34986723-34986742 | None:intergenic | 50.0% | |
| ! | AGGTGCCATAGTATGCATGC+TGG | + | chr5.2:34985451-34985470 | MS.gene95509:CDS | 50.0% |
| ! | CGTTAGAAAGCGGAGTGCTA+AGG | - | chr5.2:34986456-34986475 | None:intergenic | 50.0% |
| ! | GACCTATGTGGGACACCTTT+TGG | - | chr5.2:34986641-34986660 | None:intergenic | 50.0% |
| ! | GCTGGTCTCCTTTGTGGATT+TGG | + | chr5.2:34988806-34988825 | MS.gene95509:CDS | 50.0% |
| ! | TATATGGTGGAGAGCAAGGG+AGG | + | chr5.2:34985431-34985450 | MS.gene95509:CDS | 50.0% |
| ! | TGTCTTAGCCTTCCTTGACG+AGG | + | chr5.2:34986357-34986376 | MS.gene95509:intron | 50.0% |
| !! | AGGAGGAGGAGTGTTCCTAT+TGG | + | chr5.2:34986264-34986283 | MS.gene95509:intron | 50.0% |
| !! | AGGAGTGTTCCTATTGGGCT+GGG | + | chr5.2:34986270-34986289 | MS.gene95509:intron | 50.0% |
| !! | CCTTGTTGTTCTTGGGGACA+TGG | + | chr5.2:34985477-34985496 | MS.gene95509:CDS | 50.0% |
| !! | GGAGGAGGAGTGTTCCTATT+GGG | + | chr5.2:34986265-34986284 | MS.gene95509:intron | 50.0% |
| !! | TTGTTGGCTGGTCTCCTTTG+TGG | + | chr5.2:34988800-34988819 | MS.gene95509:CDS | 50.0% |
| ACCAGAGTCGGTCCTTGCTT+AGG | + | chr5.2:34986553-34986572 | MS.gene95509:intron | 55.0% | |
| AGTGCTAAGGCCGTGACAAG+TGG | - | chr5.2:34986443-34986462 | None:intergenic | 55.0% | |
| CCTCGCATATGGGTAGCAAG+AGG | - | chr5.2:34986334-34986353 | None:intergenic | 55.0% | |
| CCTCTTGCTACCCATATGCG+AGG | + | chr5.2:34986331-34986350 | MS.gene95509:intron | 55.0% | |
| CGCACCGTTGCGTTAGAAAG+CGG | - | chr5.2:34986466-34986485 | None:intergenic | 55.0% | |
| CTAAGACAGCGCCTCGCATA+TGG | - | chr5.2:34986345-34986364 | None:intergenic | 55.0% | |
| CTGTGCTCATGGCATCGTCT+GGG | + | chr5.2:34989165-34989184 | MS.gene95509:CDS | 55.0% | |
| GGTGGGGTTGTCCTTAGCAT+TGG | + | chr5.2:34987144-34987163 | MS.gene95509:CDS | 55.0% | |
| GGTTGTGCACCAACCAGAGT+CGG | + | chr5.2:34986541-34986560 | MS.gene95509:intron | 55.0% | |
| GGTTGTGGGCATCCTAAGCA+AGG | - | chr5.2:34986568-34986587 | None:intergenic | 55.0% | |
| ! | AAGCAAGGACCGACTCTGGT+TGG | - | chr5.2:34986553-34986572 | None:intergenic | 55.0% |
| ! | TCCTAAGCAAGGACCGACTC+TGG | - | chr5.2:34986557-34986576 | None:intergenic | 55.0% |
| ! | TGGTAGAGGCTGGGCATTGT+TGG | + | chr5.2:34988784-34988803 | MS.gene95509:CDS | 55.0% |
| !! | CCCCAGAAAGTGCTCACAAG+TGG | - | chr5.2:34989056-34989075 | None:intergenic | 55.0% |
| !! | GAGGAGTGTTCCTATTGGGC+TGG | + | chr5.2:34986269-34986288 | MS.gene95509:intron | 55.0% |
| !! | GCCCAAAAGGTGTCCCACAT+AGG | + | chr5.2:34986636-34986655 | MS.gene95509:intron | 55.0% |
| !! | TACCTTCCGAAGTAGCGGGT+CGG | + | chr5.2:34986613-34986632 | MS.gene95509:intron | 55.0% |
| AAGGACAACCCCACCAGCCA+TGG | - | chr5.2:34987139-34987158 | None:intergenic | 60.0% | |
| AGCAGCGGTTGCTGTGCTCA+TGG | + | chr5.2:34989154-34989173 | MS.gene95509:CDS | 60.0% | |
| GCTGTGCTCATGGCATCGTC+TGG | + | chr5.2:34989164-34989183 | MS.gene95509:CDS | 60.0% | |
| TCCACATAAGGCCCCACCGT+CGG | + | chr5.2:34986297-34986316 | MS.gene95509:intron | 60.0% | |
| ! | ACGGTGGGGCCTTATGTGGA+AGG | - | chr5.2:34986297-34986316 | None:intergenic | 60.0% |
| ! | AGAGGCTGGGCATTGTTGGC+TGG | + | chr5.2:34988788-34988807 | MS.gene95509:CDS | 60.0% |
| ! | CGGTGGGGCCTTATGTGGAA+GGG | - | chr5.2:34986296-34986315 | None:intergenic | 60.0% |
| !! | ACCTTCCGAAGTAGCGGGTC+GGG | + | chr5.2:34986614-34986633 | MS.gene95509:intron | 60.0% |
| AGCAGAGCCGCACTGCTCTG+CGG | + | chr5.2:34986747-34986766 | MS.gene95509:intron | 65.0% | |
| CACATAAGGCCCCACCGTCG+GGG | + | chr5.2:34986299-34986318 | MS.gene95509:intron | 65.0% | |
| CACTGCTCTGCGGTCTGCAG+CGG | + | chr5.2:34986757-34986776 | MS.gene95509:intron | 65.0% | |
| CCACATAAGGCCCCACCGTC+GGG | + | chr5.2:34986298-34986317 | MS.gene95509:intron | 65.0% | |
| CTGCAGACCGCAGAGCAGTG+CGG | - | chr5.2:34986757-34986776 | None:intergenic | 65.0% | |
| GGGCTGGGCCCTTCCACATA+AGG | + | chr5.2:34986285-34986304 | MS.gene95509:intron | 65.0% | |
| GTGGAAGGGCCCAGCCCAAT+AGG | - | chr5.2:34986282-34986301 | None:intergenic | 65.0% | |
| TTGGGCCCGACCCGCTACTT+CGG | - | chr5.2:34986622-34986641 | None:intergenic | 65.0% | |
| !! | AGAGGGCGCTTATGCCCCGA+CGG | - | chr5.2:34986316-34986335 | None:intergenic | 65.0% |
| !! | AGTAGCGGGTCGGGCCCAAA+AGG | + | chr5.2:34986623-34986642 | MS.gene95509:intron | 65.0% |
| GCCCGACCCGCTACTTCGGA+AGG | - | chr5.2:34986618-34986637 | None:intergenic | 70.0% | |
| GCGCTTATGCCCCGACGGTG+GGG | - | chr5.2:34986311-34986330 | None:intergenic | 70.0% | |
| GGCGCTTATGCCCCGACGGT+GGG | - | chr5.2:34986312-34986331 | None:intergenic | 70.0% | |
| ! | CCCGACGGTGGGGCCTTATG+TGG | - | chr5.2:34986301-34986320 | None:intergenic | 70.0% |
| GGGCGCTTATGCCCCGACGG+TGG | - | chr5.2:34986313-34986332 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 34985428 | 34989199 | 34985428 | ID=MS.gene95509 |
| chr5.2 | mRNA | 34985428 | 34989199 | 34985428 | ID=MS.gene95509.t1;Parent=MS.gene95509 |
| chr5.2 | exon | 34985428 | 34985655 | 34985428 | ID=MS.gene95509.t1.exon1;Parent=MS.gene95509.t1 |
| chr5.2 | CDS | 34985428 | 34985655 | 34985428 | ID=cds.MS.gene95509.t1;Parent=MS.gene95509.t1 |
| chr5.2 | exon | 34987111 | 34987249 | 34987111 | ID=MS.gene95509.t1.exon2;Parent=MS.gene95509.t1 |
| chr5.2 | CDS | 34987111 | 34987249 | 34987111 | ID=cds.MS.gene95509.t1;Parent=MS.gene95509.t1 |
| chr5.2 | exon | 34987358 | 34987532 | 34987358 | ID=MS.gene95509.t1.exon3;Parent=MS.gene95509.t1 |
| chr5.2 | CDS | 34987358 | 34987532 | 34987358 | ID=cds.MS.gene95509.t1;Parent=MS.gene95509.t1 |
| chr5.2 | exon | 34988033 | 34988070 | 34988033 | ID=MS.gene95509.t1.exon4;Parent=MS.gene95509.t1 |
| chr5.2 | CDS | 34988033 | 34988070 | 34988033 | ID=cds.MS.gene95509.t1;Parent=MS.gene95509.t1 |
| chr5.2 | exon | 34988155 | 34988249 | 34988155 | ID=MS.gene95509.t1.exon5;Parent=MS.gene95509.t1 |
| chr5.2 | CDS | 34988155 | 34988249 | 34988155 | ID=cds.MS.gene95509.t1;Parent=MS.gene95509.t1 |
| chr5.2 | exon | 34988515 | 34988889 | 34988515 | ID=MS.gene95509.t1.exon6;Parent=MS.gene95509.t1 |
| chr5.2 | CDS | 34988515 | 34988889 | 34988515 | ID=cds.MS.gene95509.t1;Parent=MS.gene95509.t1 |
| chr5.2 | exon | 34989047 | 34989199 | 34989047 | ID=MS.gene95509.t1.exon7;Parent=MS.gene95509.t1 |
| chr5.2 | CDS | 34989047 | 34989199 | 34989047 | ID=cds.MS.gene95509.t1;Parent=MS.gene95509.t1 |
| Gene Sequence |
| Protein sequence |
