Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95556.t1 | XP_003605920.1 | 86.7 | 248 | 25 | 3 | 1 | 243 | 1 | 245 | 7.50E-107 | 396.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95556.t1 | P0DKI0 | 43.0 | 100 | 57 | 0 | 142 | 241 | 111 | 210 | 1.5e-15 | 84.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95556.t1 | G7JDI5 | 86.7 | 248 | 25 | 3 | 1 | 243 | 1 | 245 | 5.4e-107 | 396.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049419 | MS.gene95556 | 0.832847 | 7.48E-56 | -1.69E-46 |
| MS.gene053340 | MS.gene95556 | -0.826399 | 2.77E-54 | -1.69E-46 |
| MS.gene05469 | MS.gene95556 | -0.812883 | 3.39E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene95556 | -0.813394 | 2.62E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene95556 | -0.802288 | 6.02E-49 | -1.69E-46 |
| MS.gene057156 | MS.gene95556 | 0.823195 | 1.58E-53 | -1.69E-46 |
| MS.gene058081 | MS.gene95556 | -0.807323 | 5.35E-50 | -1.69E-46 |
| MS.gene058223 | MS.gene95556 | 0.810467 | 1.14E-50 | -1.69E-46 |
| MS.gene060879 | MS.gene95556 | -0.809026 | 2.32E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95556.t1 | MTR_4g048070 | 90.868 | 219 | 15 | 1 | 30 | 243 | 27 | 245 | 8.77e-146 | 407 |
| MS.gene95556.t1 | MTR_4g048190 | 46.739 | 92 | 28 | 3 | 81 | 151 | 842 | 933 | 1.06e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95556.t1 | AT5G09600 | 38.129 | 139 | 69 | 3 | 112 | 233 | 37 | 175 | 3.51e-23 | 93.2 |
| MS.gene95556.t1 | AT5G09600 | 38.129 | 139 | 69 | 3 | 112 | 233 | 64 | 202 | 4.83e-23 | 93.6 |
| MS.gene95556.t1 | AT5G09600 | 38.129 | 139 | 69 | 3 | 112 | 233 | 64 | 202 | 4.83e-23 | 93.6 |
| MS.gene95556.t1 | AT4G32210 | 38.129 | 139 | 69 | 3 | 112 | 233 | 64 | 202 | 4.83e-23 | 93.6 |
Find 73 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCAATAGCATTGGATTCT+TGG | 0.198805 | 4.3:-50872509 | None:intergenic |
| TGCCAACGAGTTCAATTCTT+TGG | 0.263661 | 4.3:+50868680 | MS.gene95556:CDS |
| GTGTTCTGCGGCGGCGGTGG+CGG | 0.291042 | 4.3:-50868405 | None:intergenic |
| TCAATTTGCAATAGAATTGC+TGG | 0.304214 | 4.3:+50872793 | MS.gene95556:CDS |
| ACAGGAAGATGAGGAGATAA+TGG | 0.320617 | 4.3:-50872742 | None:intergenic |
| TGTTCTGCGGCGGCGGTGGC+GGG | 0.371942 | 4.3:-50868404 | None:intergenic |
| GAAAGCTGAGGCTGATAAAC+AGG | 0.389683 | 4.3:-50872760 | None:intergenic |
| ACCGGACTGCTTTGTCTCAC+TGG | 0.403158 | 4.3:-50872713 | None:intergenic |
| GAGGTGTTCTGCGGCGGCGG+TGG | 0.410680 | 4.3:-50868408 | None:intergenic |
| TATCAGAGATATCAGGCTCT+TGG | 0.419479 | 4.3:+50872433 | MS.gene95556:intron |
| AATGGTTTACCTAAGCTTGC+TGG | 0.423627 | 4.3:+50868654 | MS.gene95556:CDS |
| AGGAGATAATGGGCGAAAAC+CGG | 0.437470 | 4.3:-50872731 | None:intergenic |
| CACCAAGAATCCAATGCTAT+TGG | 0.443714 | 4.3:+50872507 | MS.gene95556:CDS |
| GATATACATGAAAGTGGGTT+TGG | 0.443895 | 4.3:+50872852 | MS.gene95556:CDS |
| TCTTCCATCCCTCGCTCCAC+CGG | 0.453645 | 4.3:+50868371 | MS.gene95556:CDS |
| GGAAGATGATAAGAAGAACT+TGG | 0.454548 | 4.3:-50868324 | None:intergenic |
| GCTGACACATTGGGATTGGC+TGG | 0.459366 | 4.3:+50872655 | MS.gene95556:CDS |
| CGGCGGCGGTGGCGGGAGAG+AGG | 0.462506 | 4.3:-50868397 | None:intergenic |
| CAGGAAGATGAGGAGATAAT+GGG | 0.473682 | 4.3:-50872741 | None:intergenic |
| GTGGAGGTGTTCTGCGGCGG+CGG | 0.479737 | 4.3:-50868411 | None:intergenic |
| GGATCCGGTGGAGCGAGGGA+TGG | 0.482734 | 4.3:-50868375 | None:intergenic |
| AGAGGGATCCGGTGGAGCGA+GGG | 0.482779 | 4.3:-50868379 | None:intergenic |
| AATTGCACTATACAGATGAT+AGG | 0.483923 | 4.3:-50872965 | None:intergenic |
| TTATATGATATACATGAAAG+TGG | 0.485153 | 4.3:+50872846 | MS.gene95556:CDS |
| TAGAATACGAACTGGTAGAA+TGG | 0.485364 | 4.3:-50872892 | None:intergenic |
| GGTTGAAGAAAGAGAAGAAG+AGG | 0.494925 | 4.3:-50868345 | None:intergenic |
| TGGACTGGACACTAATGTGC+TGG | 0.504894 | 4.3:+50872453 | MS.gene95556:CDS |
| GTGCTGGCTGGAGCTAGATA+TGG | 0.506804 | 4.3:+50872469 | MS.gene95556:CDS |
| GAGTGGTGGTGGTACGGTGG+AGG | 0.509089 | 4.3:-50868427 | None:intergenic |
| ACCACCACCACTCTTCCCTT+CGG | 0.509378 | 4.3:+50868437 | MS.gene95556:CDS |
| TTGGCATGACCAGCAAGCTT+AGG | 0.510352 | 4.3:-50868663 | None:intergenic |
| GAGATATCAGGCTCTTGGAC+TGG | 0.510444 | 4.3:+50872438 | MS.gene95556:intron |
| TACATGAAAGTGGGTTTGGT+TGG | 0.513953 | 4.3:+50872856 | MS.gene95556:CDS |
| GAGAGGGATCCGGTGGAGCG+AGG | 0.518177 | 4.3:-50868380 | None:intergenic |
| TATATGATATACATGAAAGT+GGG | 0.518946 | 4.3:+50872847 | MS.gene95556:CDS |
| AAGGAACTCACCAATAGCAT+TGG | 0.519323 | 4.3:-50872517 | None:intergenic |
| TTGATGAATAGAATACGAAC+TGG | 0.519628 | 4.3:-50872900 | None:intergenic |
| AGGGAAGAGTGGTGGTGGTA+CGG | 0.519672 | 4.3:-50868433 | None:intergenic |
| GGCGGCGGTGGCGGGAGAGA+GGG | 0.532726 | 4.3:-50868396 | None:intergenic |
| GAAGAGTGGTGGTGGTACGG+TGG | 0.534709 | 4.3:-50868430 | None:intergenic |
| ACCAGTGAGACAAAGCAGTC+CGG | 0.535769 | 4.3:+50872712 | MS.gene95556:CDS |
| TTGATTTGGCTGATCTGAGA+AGG | 0.536410 | 4.3:-50868298 | None:intergenic |
| CAATAGCATTGGATTCTTGG+TGG | 0.539060 | 4.3:-50872506 | None:intergenic |
| TCTACCAAGGGACATGTCAA+TGG | 0.544954 | 4.3:+50868636 | MS.gene95556:CDS |
| GGTGGCGGGAGAGAGGGATC+CGG | 0.549472 | 4.3:-50868390 | None:intergenic |
| GGGTGCTGACACATTGGGAT+TGG | 0.554674 | 4.3:+50872651 | MS.gene95556:CDS |
| CTGGACACTAATGTGCTGGC+TGG | 0.565168 | 4.3:+50872457 | MS.gene95556:CDS |
| AAGTGTGGGTGCTGACACAT+TGG | 0.570843 | 4.3:+50872645 | MS.gene95556:CDS |
| TAAACCATTGACATGTCCCT+TGG | 0.572355 | 4.3:-50868640 | None:intergenic |
| AAATCTCAACGGCAAGTAGG+TGG | 0.577349 | 4.3:-50872927 | None:intergenic |
| CAGAAATCTCAACGGCAAGT+AGG | 0.577571 | 4.3:-50872930 | None:intergenic |
| GGCGGGAGAGAGGGATCCGG+TGG | 0.580462 | 4.3:-50868387 | None:intergenic |
| ATAGGGACTCAACACTCTGA+TGG | 0.585666 | 4.3:+50872606 | MS.gene95556:intron |
| AGAAACTTTGAGAGAAGTGT+GGG | 0.587145 | 4.3:+50872631 | MS.gene95556:CDS |
| TACCAAAGAATTGAACTCGT+TGG | 0.588237 | 4.3:-50868682 | None:intergenic |
| GGCTGATAAACAGGAAGATG+AGG | 0.590288 | 4.3:-50872751 | None:intergenic |
| ACCGAAGGGAAGAGTGGTGG+TGG | 0.598522 | 4.3:-50868438 | None:intergenic |
| AAAGCAAGGTGACAGCAGCT+AGG | 0.607874 | 4.3:-50872822 | None:intergenic |
| GGAGCGAGGGATGGAAGAGA+AGG | 0.608241 | 4.3:-50868366 | None:intergenic |
| ACGGTGGAGGTGTTCTGCGG+CGG | 0.625160 | 4.3:-50868414 | None:intergenic |
| ATCGGTACCGAAGGGAAGAG+TGG | 0.627136 | 4.3:-50868444 | None:intergenic |
| GAACTGGTAGAATGGATCAA+AGG | 0.627943 | 4.3:-50872884 | None:intergenic |
| CAGATGATAGGACATGGCTA+AGG | 0.634205 | 4.3:-50872953 | None:intergenic |
| AGTGTGGGTGCTGACACATT+GGG | 0.635508 | 4.3:+50872646 | MS.gene95556:CDS |
| GGTACGGTGGAGGTGTTCTG+CGG | 0.636709 | 4.3:-50868417 | None:intergenic |
| GCGGATGAAAACTCTACCAA+GGG | 0.646432 | 4.3:+50868624 | MS.gene95556:intron |
| AGCGGATGAAAACTCTACCA+AGG | 0.652915 | 4.3:+50868623 | MS.gene95556:intron |
| GGCTAAGGCAGAAATCTCAA+CGG | 0.655737 | 4.3:-50872938 | None:intergenic |
| TGATCTGAGAAGGCAAGACA+TGG | 0.661362 | 4.3:-50868288 | None:intergenic |
| AAGAAACTTTGAGAGAAGTG+TGG | 0.671681 | 4.3:+50872630 | MS.gene95556:CDS |
| ACTATACAGATGATAGGACA+TGG | 0.695753 | 4.3:-50872959 | None:intergenic |
| GGTACCGAAGGGAAGAGTGG+TGG | 0.698603 | 4.3:-50868441 | None:intergenic |
| GAAAGCGTCGAAGAAAGCTG+AGG | 0.708046 | 4.3:-50872772 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAACAAAAAAAAAAAAAAAA+CGG | - | chr4.3:50869031-50869050 | None:intergenic | 10.0% |
| !! | AAATATATCATCATGATTAT+TGG | + | chr4.3:50868510-50868529 | MS.gene95556:intron | 15.0% |
| !! | ATAAATAATAATCTATGTAC+AGG | + | chr4.3:50871497-50871516 | MS.gene95556:intron | 15.0% |
| !! | TAATCATGATGATATATTTA+AGG | - | chr4.3:50868509-50868528 | None:intergenic | 15.0% |
| !!! | GATTTATTTTTGTTAGTTAT+TGG | + | chr4.3:50870355-50870374 | MS.gene95556:intron | 15.0% |
| !!! | TAAAATTTGACTAGTTTAAT+GGG | + | chr4.3:50869325-50869344 | MS.gene95556:intron | 15.0% |
| !!! | TAAAGTTTGATTAGTTTAAT+GGG | + | chr4.3:50871020-50871039 | MS.gene95556:intron | 15.0% |
| !!! | TGCTATTTAATACAAATTTT+TGG | + | chr4.3:50868951-50868970 | MS.gene95556:intron | 15.0% |
| !!! | TTAAAGTTTGATTAGTTTAA+TGG | + | chr4.3:50871019-50871038 | MS.gene95556:intron | 15.0% |
| !!! | TTTTATTTTTTTTCATTCAG+CGG | + | chr4.3:50868605-50868624 | MS.gene95556:intron | 15.0% |
| !!! | TTTTGAAATTAATTTTAGCA+GGG | - | chr4.3:50868848-50868867 | None:intergenic | 15.0% |
| !!! | TTTTTGAAATTAATTTTAGC+AGG | - | chr4.3:50868849-50868868 | None:intergenic | 15.0% |
| !! | AAAAAAGATCCTTTATGTTT+AGG | - | chr4.3:50871590-50871609 | None:intergenic | 20.0% |
| !! | ATGACATTTACATTTCAATA+GGG | + | chr4.3:50872589-50872608 | MS.gene95556:intron | 20.0% |
| !! | ATGTTTGTTTAAATTAAGAC+TGG | + | chr4.3:50869261-50869280 | MS.gene95556:intron | 20.0% |
| !! | ATTCAAAATCAAAAGCAAAT+AGG | - | chr4.3:50869919-50869938 | None:intergenic | 20.0% |
| !! | CTAAAGAAATGGTTATAAAT+TGG | - | chr4.3:50871196-50871215 | None:intergenic | 20.0% |
| !! | GTATATCATATAAAAAAGCA+AGG | - | chr4.3:50872839-50872858 | None:intergenic | 20.0% |
| !! | TATATGATATACATGAAAGT+GGG | + | chr4.3:50872847-50872866 | MS.gene95556:CDS | 20.0% |
| !! | TATTTAGTAAGTTTGCATAT+TGG | + | chr4.3:50870977-50870996 | MS.gene95556:intron | 20.0% |
| !! | TGATAACTATTTACTCAATA+AGG | + | chr4.3:50869495-50869514 | MS.gene95556:intron | 20.0% |
| !! | TTAATTTCCATGATTTCATA+TGG | + | chr4.3:50870904-50870923 | MS.gene95556:intron | 20.0% |
| !! | TTATATGATATACATGAAAG+TGG | + | chr4.3:50872846-50872865 | MS.gene95556:CDS | 20.0% |
| !! | TTGAGTAAATAGTTATCAAT+TGG | - | chr4.3:50869493-50869512 | None:intergenic | 20.0% |
| !! | TTTAGTAATTAAGTACGTAA+AGG | + | chr4.3:50870872-50870891 | MS.gene95556:intron | 20.0% |
| !!! | AAAATTTGACTAGTTTAATG+GGG | + | chr4.3:50869326-50869345 | MS.gene95556:intron | 20.0% |
| !!! | AAAGTTTGATTAGTTTAATG+GGG | + | chr4.3:50871021-50871040 | MS.gene95556:intron | 20.0% |
| !!! | AAGAAAAAGCATGAAAAATA+TGG | - | chr4.3:50871867-50871886 | None:intergenic | 20.0% |
| !!! | ACATGTATATTTGTTTTAGA+TGG | + | chr4.3:50870383-50870402 | MS.gene95556:intron | 20.0% |
| !!! | ATACTATGATCTAAACTTTT+AGG | - | chr4.3:50869155-50869174 | None:intergenic | 20.0% |
| !!! | ATCTAAAACAAATATACATG+TGG | - | chr4.3:50870384-50870403 | None:intergenic | 20.0% |
| !!! | CTAAAATTTGACTAGTTTAA+TGG | + | chr4.3:50869324-50869343 | MS.gene95556:intron | 20.0% |
| !!! | GAGTTTTTAGTTATATTAAG+TGG | + | chr4.3:50868760-50868779 | MS.gene95556:intron | 20.0% |
| !!! | TACAAATTTTTGGTTAATAG+TGG | + | chr4.3:50868961-50868980 | MS.gene95556:intron | 20.0% |
| !!! | TCTAAAACAAATATACATGT+GGG | - | chr4.3:50870383-50870402 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATAATTAG+CGG | + | chr4.3:50871726-50871745 | MS.gene95556:intron | 20.0% |
| !!! | TTTGAAATTAATTTTAGCAG+GGG | - | chr4.3:50868847-50868866 | None:intergenic | 20.0% |
| !!! | TTTTCATTCTAGAACAAATA+AGG | - | chr4.3:50872117-50872136 | None:intergenic | 20.0% |
| !!! | TTTTGTAGATTTTGAACAAA+AGG | + | chr4.3:50871449-50871468 | MS.gene95556:intron | 20.0% |
| ! | AAAACCATGTATATCATGAA+TGG | + | chr4.3:50870015-50870034 | MS.gene95556:intron | 25.0% |
| ! | AAACTAATTCCATTATACCT+AGG | + | chr4.3:50869434-50869453 | MS.gene95556:intron | 25.0% |
| ! | AACTAATTCCATTATACCTA+GGG | + | chr4.3:50869435-50869454 | MS.gene95556:intron | 25.0% |
| ! | ACTCAATTTGCAGATAATAA+AGG | - | chr4.3:50872539-50872558 | None:intergenic | 25.0% |
| ! | ATTATCATGTCAATAACAAC+CGG | - | chr4.3:50871385-50871404 | None:intergenic | 25.0% |
| ! | ATTGGATATGATTAGATTTC+TGG | - | chr4.3:50871178-50871197 | None:intergenic | 25.0% |
| ! | ATTTCTAAATCTAATTGCCA+TGG | + | chr4.3:50872397-50872416 | MS.gene95556:intron | 25.0% |
| ! | CAAATTGAGTCTAATCTATT+TGG | + | chr4.3:50872549-50872568 | MS.gene95556:intron | 25.0% |
| ! | CTCTCATTCAATTTCAAAAA+GGG | - | chr4.3:50869547-50869566 | None:intergenic | 25.0% |
| ! | GAAATGAAATAATTGGATAG+CGG | + | chr4.3:50868898-50868917 | MS.gene95556:intron | 25.0% |
| ! | GATATAAAAGAACAATTCCA+TGG | - | chr4.3:50872417-50872436 | None:intergenic | 25.0% |
| ! | GATGACATTTACATTTCAAT+AGG | + | chr4.3:50872588-50872607 | MS.gene95556:intron | 25.0% |
| ! | TAACAATCCTAACTAAAAAC+TGG | + | chr4.3:50871839-50871858 | MS.gene95556:intron | 25.0% |
| ! | TAATCTATGTACAGGAAATT+AGG | + | chr4.3:50871505-50871524 | MS.gene95556:intron | 25.0% |
| ! | TAATTATGCATCACATTATC+TGG | - | chr4.3:50872161-50872180 | None:intergenic | 25.0% |
| ! | TATAACAGGCATAACATATA+AGG | - | chr4.3:50871324-50871343 | None:intergenic | 25.0% |
| ! | TATGCCTGTTATATTATAAG+TGG | + | chr4.3:50871331-50871350 | MS.gene95556:intron | 25.0% |
| ! | TCTCTCATTCAATTTCAAAA+AGG | - | chr4.3:50869548-50869567 | None:intergenic | 25.0% |
| ! | TGAGCATGAAATGAAATAAT+TGG | + | chr4.3:50868891-50868910 | MS.gene95556:intron | 25.0% |
| ! | TGTATCTAACTTAAATGACT+AGG | - | chr4.3:50871282-50871301 | None:intergenic | 25.0% |
| ! | TTAAATGACTAGGTACAATT+AGG | - | chr4.3:50871272-50871291 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr4.3:50871701-50871720 | None:intergenic | 25.0% |
| !! | ATTTTCTCCATATGAAATCA+TGG | - | chr4.3:50870914-50870933 | None:intergenic | 25.0% |
| !! | CAAAACAACTTCTAAAGAAA+TGG | - | chr4.3:50871207-50871226 | None:intergenic | 25.0% |
| !! | TCTTTTATATCAGAGATATC+AGG | + | chr4.3:50872426-50872445 | MS.gene95556:intron | 25.0% |
| !!! | ATTTTGAGTTTTGACAATAC+TGG | + | chr4.3:50869060-50869079 | MS.gene95556:intron | 25.0% |
| !!! | CATTTCTTTAGAAGTTGTTT+TGG | + | chr4.3:50871205-50871224 | MS.gene95556:intron | 25.0% |
| !!! | TAATCTATTTGGCTTTCTTA+AGG | + | chr4.3:50872560-50872579 | MS.gene95556:intron | 25.0% |
| !!! | TGTGTTTTAGGAAAATTCTT+TGG | + | chr4.3:50868790-50868809 | MS.gene95556:intron | 25.0% |
| !!! | TTGATTTTTGAGGATTTAGT+AGG | - | chr4.3:50870445-50870464 | None:intergenic | 25.0% |
| !!! | TTGTTTTAGATGGTTTGAAA+CGG | + | chr4.3:50870393-50870412 | MS.gene95556:intron | 25.0% |
| !!! | TTTAGAAGTTGTTTTGGATA+TGG | + | chr4.3:50871211-50871230 | MS.gene95556:intron | 25.0% |
| !!! | TTTTGAAATTTTGGGTGATT+GGG | + | chr4.3:50869219-50869238 | MS.gene95556:intron | 25.0% |
| AAACTATATTTCGTGCAAGA+TGG | - | chr4.3:50872084-50872103 | None:intergenic | 30.0% | |
| AATTAGGAGCTAAAAAAGGA+AGG | + | chr4.3:50871521-50871540 | MS.gene95556:intron | 30.0% | |
| AATTGCACTATACAGATGAT+AGG | - | chr4.3:50872968-50872987 | None:intergenic | 30.0% | |
| AATTGGAGAAATGAGAGAAT+CGG | - | chr4.3:50868465-50868484 | None:intergenic | 30.0% | |
| ACAATACAGAAAAGAGATAG+AGG | - | chr4.3:50870551-50870570 | None:intergenic | 30.0% | |
| ACAGTGAAATCATGAAAACA+TGG | - | chr4.3:50870957-50870976 | None:intergenic | 30.0% | |
| ACATAGTAGATGAAGTTTCT+AGG | - | chr4.3:50870324-50870343 | None:intergenic | 30.0% | |
| AGCGATCAAAGAGATAAAAT+AGG | - | chr4.3:50869870-50869889 | None:intergenic | 30.0% | |
| AGGAAATTAGGAGCTAAAAA+AGG | + | chr4.3:50871517-50871536 | MS.gene95556:intron | 30.0% | |
| AGTTATTTGAGAGGAAATTG+GGG | + | chr4.3:50870754-50870773 | MS.gene95556:intron | 30.0% | |
| ATACTATATTTCGTGCAAGA+TGG | - | chr4.3:50872235-50872254 | None:intergenic | 30.0% | |
| ATACTGTTATGTAATTGAGC+TGG | + | chr4.3:50869196-50869215 | MS.gene95556:intron | 30.0% | |
| ATTGGGCAAATTTAGTGTAT+AGG | + | chr4.3:50869236-50869255 | MS.gene95556:intron | 30.0% | |
| CAAACTATTATGATAGCAAC+TGG | - | chr4.3:50870245-50870264 | None:intergenic | 30.0% | |
| CAGTGAAATCATGAAAACAT+GGG | - | chr4.3:50870956-50870975 | None:intergenic | 30.0% | |
| CAGTTATTTGAGAGGAAATT+GGG | + | chr4.3:50870753-50870772 | MS.gene95556:intron | 30.0% | |
| CATAAAATACTAGAAACGCA+TGG | - | chr4.3:50870078-50870097 | None:intergenic | 30.0% | |
| CATTCAATTTCAAAAAGGGA+GGG | - | chr4.3:50869543-50869562 | None:intergenic | 30.0% | |
| CCTAGATTACCTAAACATAA+AGG | + | chr4.3:50871578-50871597 | MS.gene95556:intron | 30.0% | |
| CCTTTATGTTTAGGTAATCT+AGG | - | chr4.3:50871581-50871600 | None:intergenic | 30.0% | |
| CTACAAAAGAAATCACAACA+TGG | - | chr4.3:50871437-50871456 | None:intergenic | 30.0% | |
| GAAGCCACTTATAATATAAC+AGG | - | chr4.3:50871338-50871357 | None:intergenic | 30.0% | |
| GGGTTGGATTTATATAGATT+GGG | + | chr4.3:50869623-50869642 | MS.gene95556:intron | 30.0% | |
| GGTTACTTAATTCTGCATAT+TGG | + | chr4.3:50869282-50869301 | MS.gene95556:intron | 30.0% | |
| GTTCAGTATTTGCTTAAATC+TGG | + | chr4.3:50869986-50870005 | MS.gene95556:intron | 30.0% | |
| TAATTATGCATCACGTTATC+TGG | - | chr4.3:50872355-50872374 | None:intergenic | 30.0% | |
| TAGTACAAAACAAAACTACG+AGG | - | chr4.3:50868818-50868837 | None:intergenic | 30.0% | |
| TATAAGGAAAAGATGTCCAA+CGG | - | chr4.3:50871308-50871327 | None:intergenic | 30.0% | |
| TCAATTTGCAATAGAATTGC+TGG | + | chr4.3:50872793-50872812 | MS.gene95556:CDS | 30.0% | |
| TCATTCAATTTCAAAAAGGG+AGG | - | chr4.3:50869544-50869563 | None:intergenic | 30.0% | |
| TCTTATTAATACCTGTTTGC+AGG | + | chr4.3:50871356-50871375 | MS.gene95556:intron | 30.0% | |
| TTAGTTTAATGGGGAAACTT+TGG | + | chr4.3:50871030-50871049 | MS.gene95556:intron | 30.0% | |
| TTATCATGTCAATAACAACC+GGG | - | chr4.3:50871384-50871403 | None:intergenic | 30.0% | |
| TTCAGAATAACGATTACACA+TGG | - | chr4.3:50869597-50869616 | None:intergenic | 30.0% | |
| TTGAATGAGAGAGAAATCTA+TGG | + | chr4.3:50869556-50869575 | MS.gene95556:intron | 30.0% | |
| TTGATGAATAGAATACGAAC+TGG | - | chr4.3:50872903-50872922 | None:intergenic | 30.0% | |
| TTGGGCAAATTTAGTGTATA+GGG | + | chr4.3:50869237-50869256 | MS.gene95556:intron | 30.0% | |
| TTGTATGCTAGTGTGATATA+TGG | + | chr4.3:50869842-50869861 | MS.gene95556:intron | 30.0% | |
| ! | ATCTACTATGTTCTAGCTAT+GGG | + | chr4.3:50870333-50870352 | MS.gene95556:intron | 30.0% |
| ! | ATTTTATCTCTTTGATCGCT+TGG | + | chr4.3:50869870-50869889 | MS.gene95556:intron | 30.0% |
| ! | TTTTGTAGTTAGAGAAGTTG+TGG | + | chr4.3:50870612-50870631 | MS.gene95556:intron | 30.0% |
| !! | AGAGTCAATTTTTCAAACCA+AGG | - | chr4.3:50871080-50871099 | None:intergenic | 30.0% |
| !!! | AGTAAGTGAGTTGATTTTTG+AGG | - | chr4.3:50870455-50870474 | None:intergenic | 30.0% |
| !!! | GAAGAACTTGGATTTTGATT+TGG | - | chr4.3:50868315-50868334 | None:intergenic | 30.0% |
| !!! | GTAGTTTTGTTTTGTACTAC+TGG | + | chr4.3:50868819-50868838 | MS.gene95556:intron | 30.0% |
| !!! | GTTTTGAAATTTTGGGTGAT+TGG | + | chr4.3:50869218-50869237 | MS.gene95556:intron | 30.0% |
| !!! | TATGGTTCCAGTTTTTAGTT+AGG | - | chr4.3:50871849-50871868 | None:intergenic | 30.0% |
| !!! | TGAGCTGGTTTTGAAATTTT+GGG | + | chr4.3:50869211-50869230 | MS.gene95556:intron | 30.0% |
| !!! | TTGAGCTGGTTTTGAAATTT+TGG | + | chr4.3:50869210-50869229 | MS.gene95556:intron | 30.0% |
| AAAAGAGATAGAGGAGAATG+AGG | - | chr4.3:50870542-50870561 | None:intergenic | 35.0% | |
| AATCGTTATTCTGAACCGAA+CGG | + | chr4.3:50869602-50869621 | MS.gene95556:intron | 35.0% | |
| ACTATACAGATGATAGGACA+TGG | - | chr4.3:50872962-50872981 | None:intergenic | 35.0% | |
| AGCTCCATTCATGATATACA+TGG | - | chr4.3:50870022-50870041 | None:intergenic | 35.0% | |
| ATGCAAATTACCTAAGCTGA+TGG | + | chr4.3:50871612-50871631 | MS.gene95556:intron | 35.0% | |
| CAAAAACTAACATCACAGCT+AGG | - | chr4.3:50870284-50870303 | None:intergenic | 35.0% | |
| CAAGTTATGAAGCATGGATA+CGG | - | chr4.3:50871786-50871805 | None:intergenic | 35.0% | |
| CCAATTTCCTCTCAAATAAC+TGG | - | chr4.3:50870755-50870774 | None:intergenic | 35.0% | |
| CCAGTTATTTGAGAGGAAAT+TGG | + | chr4.3:50870752-50870771 | MS.gene95556:intron | 35.0% | |
| CTAGATAGCTGAGATATACA+CGG | - | chr4.3:50871890-50871909 | None:intergenic | 35.0% | |
| CTATATAAATCCAACCCGTT+CGG | - | chr4.3:50869620-50869639 | None:intergenic | 35.0% | |
| GGAAGATGATAAGAAGAACT+TGG | - | chr4.3:50868327-50868346 | None:intergenic | 35.0% | |
| GTATATCATGAATGGAGCTT+AGG | + | chr4.3:50870023-50870042 | MS.gene95556:intron | 35.0% | |
| TAAGCATCCAGTTATTTGAG+AGG | + | chr4.3:50870745-50870764 | MS.gene95556:intron | 35.0% | |
| TACCAAAGAATTGAACTCGT+TGG | - | chr4.3:50868685-50868704 | None:intergenic | 35.0% | |
| TAGAATACGAACTGGTAGAA+TGG | - | chr4.3:50872895-50872914 | None:intergenic | 35.0% | |
| TATGCACAAGTTATGAAGCA+TGG | - | chr4.3:50871792-50871811 | None:intergenic | 35.0% | |
| TCTCAAATAATTAGCGGTGT+CGG | + | chr4.3:50871732-50871751 | MS.gene95556:intron | 35.0% | |
| TGGGCAAATTTAGTGTATAG+GGG | + | chr4.3:50869238-50869257 | MS.gene95556:intron | 35.0% | |
| TGTGAACACAACTCATTAGA+AGG | - | chr4.3:50871249-50871268 | None:intergenic | 35.0% | |
| TGTGAAGTAACTGTTAGTAG+TGG | + | chr4.3:50870568-50870587 | MS.gene95556:intron | 35.0% | |
| TGTTGTAGTTAGAGAAGTTG+TGG | + | chr4.3:50870693-50870712 | MS.gene95556:intron | 35.0% | |
| TTCTACTCTTAACTTCTCAC+TGG | + | chr4.3:50871551-50871570 | MS.gene95556:intron | 35.0% | |
| ! | AAGAAACTTTGAGAGAAGTG+TGG | + | chr4.3:50872630-50872649 | MS.gene95556:CDS | 35.0% |
| ! | AGAAACTTTGAGAGAAGTGT+GGG | + | chr4.3:50872631-50872650 | MS.gene95556:CDS | 35.0% |
| ! | AGTAGATGAAGTTTCTAGGA+AGG | - | chr4.3:50870320-50870339 | None:intergenic | 35.0% |
| ! | AGTGGAGTGAAATGTGTTTT+AGG | + | chr4.3:50868778-50868797 | MS.gene95556:intron | 35.0% |
| ! | CATCTACTATGTTCTAGCTA+TGG | + | chr4.3:50870332-50870351 | MS.gene95556:intron | 35.0% |
| ! | CGGGTTGGATTTATATAGAT+TGG | + | chr4.3:50869622-50869641 | MS.gene95556:intron | 35.0% |
| ! | GATATACATGAAAGTGGGTT+TGG | + | chr4.3:50872852-50872871 | MS.gene95556:CDS | 35.0% |
| ! | GTAATTATATGTGTCGGTGT+CGG | - | chr4.3:50871695-50871714 | None:intergenic | 35.0% |
| ! | GTAGATGAAGTTTCTAGGAA+GGG | - | chr4.3:50870319-50870338 | None:intergenic | 35.0% |
| ! | GTTGAATGCTTTTCTGTGTT+GGG | + | chr4.3:50870146-50870165 | MS.gene95556:intron | 35.0% |
| ! | TAGCCTTGCAAAATGAGAAA+CGG | - | chr4.3:50869747-50869766 | None:intergenic | 35.0% |
| ! | TGTTGAATGCTTTTCTGTGT+TGG | + | chr4.3:50870145-50870164 | MS.gene95556:intron | 35.0% |
| ! | TTTCTCATTTTGCAAGGCTA+TGG | + | chr4.3:50869747-50869766 | MS.gene95556:intron | 35.0% |
| !! | AGTTCTGAACTGCTAACTTT+AGG | + | chr4.3:50872000-50872019 | MS.gene95556:intron | 35.0% |
| !! | GGAGGAAGTATAACAAGTTT+TGG | - | chr4.3:50870518-50870537 | None:intergenic | 35.0% |
| !! | GGTTGATAAGAAAGAAGAAG+AGG | + | chr4.3:50869891-50869910 | MS.gene95556:intron | 35.0% |
| !! | TCTATTTGGCTTTCTTAAGG+TGG | + | chr4.3:50872563-50872582 | MS.gene95556:intron | 35.0% |
| !!! | AGTTGTTTTGGATATGGATG+TGG | + | chr4.3:50871217-50871236 | MS.gene95556:intron | 35.0% |
| !!! | TTGTCTCACTGGTTTTACTT+GGG | - | chr4.3:50872705-50872724 | None:intergenic | 35.0% |
| !!! | TTTGTCTCACTGGTTTTACT+TGG | - | chr4.3:50872706-50872725 | None:intergenic | 35.0% |
| AACAGAACCAAGGTGATTCT+TGG | - | chr4.3:50870492-50870511 | None:intergenic | 40.0% | |
| AACTGATAGCAGGAAAAGAG+AGG | + | chr4.3:50870722-50870741 | MS.gene95556:intron | 40.0% | |
| AAGCTAATTCCATCGTACCT+AGG | + | chr4.3:50871132-50871151 | MS.gene95556:intron | 40.0% | |
| AAGGAACTCACCAATAGCAT+TGG | - | chr4.3:50872520-50872539 | None:intergenic | 40.0% | |
| AATGGTTTACCTAAGCTTGC+TGG | + | chr4.3:50868654-50868673 | MS.gene95556:CDS | 40.0% | |
| ACAGGAAGATGAGGAGATAA+TGG | - | chr4.3:50872745-50872764 | None:intergenic | 40.0% | |
| AGCCTTGCAAAATGAGAAAC+GGG | - | chr4.3:50869746-50869765 | None:intergenic | 40.0% | |
| AGCTAATTCCATCGTACCTA+GGG | + | chr4.3:50871133-50871152 | MS.gene95556:intron | 40.0% | |
| ATCGTTATTCTGAACCGAAC+GGG | + | chr4.3:50869603-50869622 | MS.gene95556:intron | 40.0% | |
| CACCAAGAATCCAATGCTAT+TGG | + | chr4.3:50872507-50872526 | MS.gene95556:CDS | 40.0% | |
| CAGGAAGATGAGGAGATAAT+GGG | - | chr4.3:50872744-50872763 | None:intergenic | 40.0% | |
| CATGGTAAGCATCATGTAGA+AGG | - | chr4.3:50871419-50871438 | None:intergenic | 40.0% | |
| CTAGTTTAATGGGGAAGCTT+CGG | + | chr4.3:50869335-50869354 | MS.gene95556:intron | 40.0% | |
| CTGGAACAATGCATTTGTTC+AGG | - | chr4.3:50872142-50872161 | None:intergenic | 40.0% | |
| GAACTGGTAGAATGGATCAA+AGG | - | chr4.3:50872887-50872906 | None:intergenic | 40.0% | |
| GGTTGAAGAAAGAGAAGAAG+AGG | - | chr4.3:50868348-50868367 | None:intergenic | 40.0% | |
| GTCAGACTGTCTGTTGTTAT+TGG | + | chr4.3:50870204-50870223 | MS.gene95556:intron | 40.0% | |
| TAAACCATTGACATGTCCCT+TGG | - | chr4.3:50868643-50868662 | None:intergenic | 40.0% | |
| TAAGCTGATGGAATGAAGCA+CGG | + | chr4.3:50871624-50871643 | MS.gene95556:intron | 40.0% | |
| TAAGTTAGATACACCTCCGT+TGG | + | chr4.3:50871289-50871308 | MS.gene95556:intron | 40.0% | |
| TATCAGAGATATCAGGCTCT+TGG | + | chr4.3:50872433-50872452 | MS.gene95556:intron | 40.0% | |
| TCTAGTGTTTAGCAGAAGCA+AGG | + | chr4.3:50870818-50870837 | MS.gene95556:intron | 40.0% | |
| TGCCAACGAGTTCAATTCTT+TGG | + | chr4.3:50868680-50868699 | MS.gene95556:CDS | 40.0% | |
| TTGGCTTAATGGGAGATTCA+TGG | + | chr4.3:50871049-50871068 | MS.gene95556:intron | 40.0% | |
| TTTGCAGCCAGGTAGTAAAT+CGG | - | chr4.3:50869111-50869130 | None:intergenic | 40.0% | |
| ! | ATGGGGAAACTTTGGCTTAA+TGG | + | chr4.3:50871038-50871057 | MS.gene95556:intron | 40.0% |
| ! | CAATAGCATTGGATTCTTGG+TGG | - | chr4.3:50872509-50872528 | None:intergenic | 40.0% |
| ! | CACCAATAGCATTGGATTCT+TGG | - | chr4.3:50872512-50872531 | None:intergenic | 40.0% |
| ! | CTTGTGTGACTTTTATGCTC+TGG | + | chr4.3:50869801-50869820 | MS.gene95556:intron | 40.0% |
| ! | TACATGAAAGTGGGTTTGGT+TGG | + | chr4.3:50872856-50872875 | MS.gene95556:CDS | 40.0% |
| ! | TGGGGAAACTTTGGCTTAAT+GGG | + | chr4.3:50871039-50871058 | MS.gene95556:intron | 40.0% |
| ! | TGTGACTTTTATGCTCTGGT+AGG | + | chr4.3:50869805-50869824 | MS.gene95556:intron | 40.0% |
| ! | TTCACAAGATTTTTGCAGCC+AGG | - | chr4.3:50869122-50869141 | None:intergenic | 40.0% |
| ! | TTTTGGATATGGATGTGGTC+TGG | + | chr4.3:50871222-50871241 | MS.gene95556:intron | 40.0% |
| !! | TAGAAACGCATGGCTTTTTC+AGG | - | chr4.3:50870068-50870087 | None:intergenic | 40.0% |
| !! | TTGATTTGGCTGATCTGAGA+AGG | - | chr4.3:50868301-50868320 | None:intergenic | 40.0% |
| !!! | GGCTTTTTCAGGACAGTATA+TGG | - | chr4.3:50870057-50870076 | None:intergenic | 40.0% |
| AAATCTCAACGGCAAGTAGG+TGG | - | chr4.3:50872930-50872949 | None:intergenic | 45.0% | |
| AAGGAAAAGATGTCCAACGG+AGG | - | chr4.3:50871305-50871324 | None:intergenic | 45.0% | |
| AATACCTGTTTGCAGGTTCC+CGG | + | chr4.3:50871363-50871382 | MS.gene95556:intron | 45.0% | |
| AATGAAGCACGGATACTCCT+CGG | + | chr4.3:50871635-50871654 | MS.gene95556:intron | 45.0% | |
| ACGAACAGCCCTAGGTATAA+TGG | - | chr4.3:50869446-50869465 | None:intergenic | 45.0% | |
| ACTAAACCACAAACAGCCCT+AGG | - | chr4.3:50871152-50871171 | None:intergenic | 45.0% | |
| AGAACCAAGGTGATTCTTGG+AGG | - | chr4.3:50870489-50870508 | None:intergenic | 45.0% | |
| AGAGATAGAGGAGAATGAGG+AGG | - | chr4.3:50870539-50870558 | None:intergenic | 45.0% | |
| AGCGGATGAAAACTCTACCA+AGG | + | chr4.3:50868623-50868642 | MS.gene95556:intron | 45.0% | |
| ATAGGGACTCAACACTCTGA+TGG | + | chr4.3:50872606-50872625 | MS.gene95556:intron | 45.0% | |
| ATGAAGCATGGATACGGACA+CGG | - | chr4.3:50871780-50871799 | None:intergenic | 45.0% | |
| CACTCGCAACATGTCAAAGA+AGG | - | chr4.3:50872039-50872058 | None:intergenic | 45.0% | |
| CAGAAATCTCAACGGCAAGT+AGG | - | chr4.3:50872933-50872952 | None:intergenic | 45.0% | |
| CAGATGATAGGACATGGCTA+AGG | - | chr4.3:50872956-50872975 | None:intergenic | 45.0% | |
| CCAGGTAGTAAATCGGTCAA+AGG | - | chr4.3:50869104-50869123 | None:intergenic | 45.0% | |
| CTGCATGTATGCACTACAGT+GGG | + | chr4.3:50870181-50870200 | MS.gene95556:intron | 45.0% | |
| GAAAGCTGAGGCTGATAAAC+AGG | - | chr4.3:50872763-50872782 | None:intergenic | 45.0% | |
| GAACCAAGGTGATTCTTGGA+GGG | - | chr4.3:50870488-50870507 | None:intergenic | 45.0% | |
| GCGGATGAAAACTCTACCAA+GGG | + | chr4.3:50868624-50868643 | MS.gene95556:intron | 45.0% | |
| GGAGACTCATGGGAAAACAT+TGG | + | chr4.3:50869365-50869384 | MS.gene95556:intron | 45.0% | |
| GGAGATTCATGGTGAAACCT+TGG | + | chr4.3:50871060-50871079 | MS.gene95556:intron | 45.0% | |
| GGCTAAGGCAGAAATCTCAA+CGG | - | chr4.3:50872941-50872960 | None:intergenic | 45.0% | |
| GGCTGATAAACAGGAAGATG+AGG | - | chr4.3:50872754-50872773 | None:intergenic | 45.0% | |
| GTGCTTCATTCCATCAGCTT+AGG | - | chr4.3:50871625-50871644 | None:intergenic | 45.0% | |
| GTGGTGTCTAAACTGATAGC+AGG | + | chr4.3:50870712-50870731 | MS.gene95556:intron | 45.0% | |
| TCTACCAAGGGACATGTCAA+TGG | + | chr4.3:50868636-50868655 | MS.gene95556:CDS | 45.0% | |
| TCTGCATGTATGCACTACAG+TGG | + | chr4.3:50870180-50870199 | MS.gene95556:intron | 45.0% | |
| TGCATGTATGCACTACAGTG+GGG | + | chr4.3:50870182-50870201 | MS.gene95556:intron | 45.0% | |
| TTATTCTGAACCGAACGGGT+TGG | + | chr4.3:50869607-50869626 | MS.gene95556:intron | 45.0% | |
| TTCAAAAAGGGAGGGAGACA+TGG | - | chr4.3:50869535-50869554 | None:intergenic | 45.0% | |
| TTGAGAGGAAATTGGGGCTT+TGG | + | chr4.3:50870760-50870779 | MS.gene95556:intron | 45.0% | |
| ! | AATGAGAGAATCGGTACCGA+AGG | - | chr4.3:50868456-50868475 | None:intergenic | 45.0% |
| ! | AGCCCGTTTCTCATTTTGCA+AGG | + | chr4.3:50869741-50869760 | MS.gene95556:intron | 45.0% |
| ! | ATGAGAGAATCGGTACCGAA+GGG | - | chr4.3:50868455-50868474 | None:intergenic | 45.0% |
| ! | CCTTTGACCGATTTACTACC+TGG | + | chr4.3:50869101-50869120 | MS.gene95556:intron | 45.0% |
| ! | GGAAATTGGGGCTTTGGTTT+AGG | + | chr4.3:50870766-50870785 | MS.gene95556:intron | 45.0% |
| !! | AGGAGATAATGGGCGAAAAC+CGG | - | chr4.3:50872734-50872753 | None:intergenic | 45.0% |
| !!! | GTTTTGGCTGAACAGAACCA+AGG | - | chr4.3:50870502-50870521 | None:intergenic | 45.0% |
| !! | ATTAAATTAATTGAAAAAAT+TGG | - | chr4.3:50868482-50868501 | None:intergenic | 5.0% |
| AAAGCAAGGTGACAGCAGCT+AGG | - | chr4.3:50872825-50872844 | None:intergenic | 50.0% | |
| AAGCCCTCCAAGAATCACCT+TGG | + | chr4.3:50870482-50870501 | MS.gene95556:intron | 50.0% | |
| ACAAACAGCCCTAGGTACGA+TGG | - | chr4.3:50871144-50871163 | None:intergenic | 50.0% | |
| ACCAGTGAGACAAAGCAGTC+CGG | + | chr4.3:50872712-50872731 | MS.gene95556:CDS | 50.0% | |
| ACTCAATCACGAACAGCCCT+AGG | - | chr4.3:50869454-50869473 | None:intergenic | 50.0% | |
| ATCGTACCTAGGGCTGTTTG+TGG | + | chr4.3:50871143-50871162 | MS.gene95556:intron | 50.0% | |
| GAGATATCAGGCTCTTGGAC+TGG | + | chr4.3:50872438-50872457 | MS.gene95556:intron | 50.0% | |
| GATAGAGGAGAATGAGGAGG+AGG | - | chr4.3:50870536-50870555 | None:intergenic | 50.0% | |
| GGATTAGACATGTCCCGTGT+CGG | + | chr4.3:50871656-50871675 | MS.gene95556:intron | 50.0% | |
| TTGCCTGAGACTTGCACAAC+TGG | + | chr4.3:50869667-50869686 | MS.gene95556:intron | 50.0% | |
| TTGGCATGACCAGCAAGCTT+AGG | - | chr4.3:50868666-50868685 | None:intergenic | 50.0% | |
| ! | AAGCCTTATCCCACTACGTG+GGG | - | chr4.3:50870661-50870680 | None:intergenic | 50.0% |
| ! | ATGGGGAAGCTTCGGTTTGA+CGG | + | chr4.3:50869343-50869362 | MS.gene95556:intron | 50.0% |
| ! | CAAGCCTTATCCCACTACGT+GGG | - | chr4.3:50870662-50870681 | None:intergenic | 50.0% |
| ! | TGGACTGGACACTAATGTGC+TGG | + | chr4.3:50872453-50872472 | MS.gene95556:CDS | 50.0% |
| ! | TGGGGCTTTGGTTTAGGCAA+GGG | + | chr4.3:50870772-50870791 | MS.gene95556:intron | 50.0% |
| ! | TTGGGGCTTTGGTTTAGGCA+AGG | + | chr4.3:50870771-50870790 | MS.gene95556:intron | 50.0% |
| !! | AAGTGTGGGTGCTGACACAT+TGG | + | chr4.3:50872645-50872664 | MS.gene95556:CDS | 50.0% |
| !! | AGTGTGGGTGCTGACACATT+GGG | + | chr4.3:50872646-50872665 | MS.gene95556:CDS | 50.0% |
| !! | GAAAGCGTCGAAGAAAGCTG+AGG | - | chr4.3:50872775-50872794 | None:intergenic | 50.0% |
| ACAACCGGGAACCTGCAAAC+AGG | - | chr4.3:50871370-50871389 | None:intergenic | 55.0% | |
| ACCACCACCACTCTTCCCTT+CGG | + | chr4.3:50868437-50868456 | MS.gene95556:CDS | 55.0% | |
| ACCGGACTGCTTTGTCTCAC+TGG | - | chr4.3:50872716-50872735 | None:intergenic | 55.0% | |
| ATACGGACACGGACATGACG+CGG | - | chr4.3:50871769-50871788 | None:intergenic | 55.0% | |
| CACGGGACATGTCTAATCCG+AGG | - | chr4.3:50871655-50871674 | None:intergenic | 55.0% | |
| CGGTTTGACGGGAGACTCAT+GGG | + | chr4.3:50869355-50869374 | MS.gene95556:intron | 55.0% | |
| CTTATCCCACTACGTGGGGT+CGG | - | chr4.3:50870657-50870676 | None:intergenic | 55.0% | |
| GTGCCAGTTGTGCAAGTCTC+AGG | - | chr4.3:50869673-50869692 | None:intergenic | 55.0% | |
| ! | ATCGGTACCGAAGGGAAGAG+TGG | - | chr4.3:50868447-50868466 | None:intergenic | 55.0% |
| ! | CCAAGCCTTATCCCACTACG+TGG | - | chr4.3:50870663-50870682 | None:intergenic | 55.0% |
| ! | CCACGTAGTGGGATAAGGCT+TGG | + | chr4.3:50870660-50870679 | MS.gene95556:intron | 55.0% |
| ! | CTGGACACTAATGTGCTGGC+TGG | + | chr4.3:50872457-50872476 | MS.gene95556:CDS | 55.0% |
| ! | GCTGACACATTGGGATTGGC+TGG | + | chr4.3:50872655-50872674 | MS.gene95556:CDS | 55.0% |
| ! | TCGGTTTGACGGGAGACTCA+TGG | + | chr4.3:50869354-50869373 | MS.gene95556:intron | 55.0% |
| ! | TGGGGAAGCTTCGGTTTGAC+GGG | + | chr4.3:50869344-50869363 | MS.gene95556:intron | 55.0% |
| !! | AGGGAAGAGTGGTGGTGGTA+CGG | - | chr4.3:50868436-50868455 | None:intergenic | 55.0% |
| !! | GGGTGCTGACACATTGGGAT+TGG | + | chr4.3:50872651-50872670 | MS.gene95556:CDS | 55.0% |
| !! | GTGCTGGCTGGAGCTAGATA+TGG | + | chr4.3:50872469-50872488 | MS.gene95556:CDS | 55.0% |
| ACACGACACGTGTCCGACAC+GGG | - | chr4.3:50871672-50871691 | None:intergenic | 60.0% | |
| ACCGAAGGGAAGAGTGGTGG+TGG | - | chr4.3:50868441-50868460 | None:intergenic | 60.0% | |
| ACTACGTGGGGTCGGCTACA+TGG | - | chr4.3:50870649-50870668 | None:intergenic | 60.0% | |
| ATGTAGCCGACCCCACGTAG+TGG | + | chr4.3:50870648-50870667 | MS.gene95556:intron | 60.0% | |
| GACACGACACGTGTCCGACA+CGG | - | chr4.3:50871673-50871692 | None:intergenic | 60.0% | |
| GGAGCGAGGGATGGAAGAGA+AGG | - | chr4.3:50868369-50868388 | None:intergenic | 60.0% | |
| TCTTCCATCCCTCGCTCCAC+CGG | + | chr4.3:50868371-50868390 | MS.gene95556:CDS | 60.0% | |
| TGTAGCCGACCCCACGTAGT+GGG | + | chr4.3:50870649-50870668 | MS.gene95556:intron | 60.0% | |
| ! | CGACCCCACGTAGTGGGATA+AGG | + | chr4.3:50870655-50870674 | MS.gene95556:intron | 60.0% |
| ! | GGTACCGAAGGGAAGAGTGG+TGG | - | chr4.3:50868444-50868463 | None:intergenic | 60.0% |
| !! | GAAGAGTGGTGGTGGTACGG+TGG | - | chr4.3:50868433-50868452 | None:intergenic | 60.0% |
| !! | GGTACGGTGGAGGTGTTCTG+CGG | - | chr4.3:50868420-50868439 | None:intergenic | 60.0% |
| AGAGGGATCCGGTGGAGCGA+GGG | - | chr4.3:50868382-50868401 | None:intergenic | 65.0% | |
| !! | ACGGTGGAGGTGTTCTGCGG+CGG | - | chr4.3:50868417-50868436 | None:intergenic | 65.0% |
| !! | GAGTGGTGGTGGTACGGTGG+AGG | - | chr4.3:50868430-50868449 | None:intergenic | 65.0% |
| GAGAGGGATCCGGTGGAGCG+AGG | - | chr4.3:50868383-50868402 | None:intergenic | 70.0% | |
| GGATCCGGTGGAGCGAGGGA+TGG | - | chr4.3:50868378-50868397 | None:intergenic | 70.0% | |
| !! | GGTGGCGGGAGAGAGGGATC+CGG | - | chr4.3:50868393-50868412 | None:intergenic | 70.0% |
| !! | GTGGAGGTGTTCTGCGGCGG+CGG | - | chr4.3:50868414-50868433 | None:intergenic | 70.0% |
| GGCGGGAGAGAGGGATCCGG+TGG | - | chr4.3:50868390-50868409 | None:intergenic | 75.0% | |
| GTGTTCTGCGGCGGCGGTGG+CGG | - | chr4.3:50868408-50868427 | None:intergenic | 75.0% | |
| TGTTCTGCGGCGGCGGTGGC+GGG | - | chr4.3:50868407-50868426 | None:intergenic | 75.0% | |
| ! | GAGGTGTTCTGCGGCGGCGG+TGG | - | chr4.3:50868411-50868430 | None:intergenic | 75.0% |
| !!! | GGCGGCGGTGGCGGGAGAGA+GGG | - | chr4.3:50868399-50868418 | None:intergenic | 80.0% |
| !!! | CGGCGGCGGTGGCGGGAGAG+AGG | - | chr4.3:50868400-50868419 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 50868290 | 50873005 | 50868290 | ID=MS.gene95556 |
| chr4.3 | mRNA | 50868290 | 50873005 | 50868290 | ID=MS.gene95556.t1;Parent=MS.gene95556 |
| chr4.3 | exon | 50868290 | 50868458 | 50868290 | ID=MS.gene95556.t1.exon1;Parent=MS.gene95556.t1 |
| chr4.3 | CDS | 50868290 | 50868458 | 50868290 | ID=cds.MS.gene95556.t1;Parent=MS.gene95556.t1 |
| chr4.3 | exon | 50868625 | 50868701 | 50868625 | ID=MS.gene95556.t1.exon2;Parent=MS.gene95556.t1 |
| chr4.3 | CDS | 50868625 | 50868701 | 50868625 | ID=cds.MS.gene95556.t1;Parent=MS.gene95556.t1 |
| chr4.3 | exon | 50872439 | 50872528 | 50872439 | ID=MS.gene95556.t1.exon3;Parent=MS.gene95556.t1 |
| chr4.3 | CDS | 50872439 | 50872528 | 50872439 | ID=cds.MS.gene95556.t1;Parent=MS.gene95556.t1 |
| chr4.3 | exon | 50872610 | 50873005 | 50872610 | ID=MS.gene95556.t1.exon4;Parent=MS.gene95556.t1 |
| chr4.3 | CDS | 50872610 | 50873005 | 50872610 | ID=cds.MS.gene95556.t1;Parent=MS.gene95556.t1 |
| Gene Sequence |
| Protein sequence |
