AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96248

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96248.t1 MTR_2g019210 96.659 449 15 0 1 449 1 449 0.0 902
MS.gene96248.t1 MTR_2g019210 97.527 364 9 0 1 364 1 364 0.0 741
MS.gene96248.t1 MTR_1g063090 90.816 294 27 0 1 294 1 294 0.0 568
MS.gene96248.t1 MTR_1g031820 30.970 268 165 8 11 264 401 662 5.34e-27 114
MS.gene96248.t1 MTR_8g077430 29.368 269 168 7 11 264 4 265 9.41e-27 109
MS.gene96248.t1 MTR_1g007060 25.899 278 187 6 17 278 28 302 8.50e-22 95.9
MS.gene96248.t1 MTR_1g007060 26.749 243 163 4 17 247 28 267 6.88e-21 92.8
MS.gene96248.t1 MTR_8g077430 27.228 202 128 6 75 264 2 196 6.83e-14 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96248.t1 AT3G60500 60.225 445 148 6 1 433 1 428 0.0 515
MS.gene96248.t1 AT3G60500 60.225 445 148 6 1 433 1 428 0.0 515
MS.gene96248.t1 AT3G60500 60.225 445 148 6 1 433 1 428 0.0 515
MS.gene96248.t1 AT3G60500 63.969 383 117 5 1 377 1 368 4.12e-171 485
MS.gene96248.t1 AT3G12990 70.861 302 88 0 1 302 1 302 1.00e-158 451
MS.gene96248.t1 AT3G12990 70.861 302 88 0 1 302 1 302 1.00e-158 451
MS.gene96248.t1 AT3G12990 72.535 284 78 0 1 284 1 284 1.04e-150 430
MS.gene96248.t1 AT3G12990 74.766 214 54 0 1 214 1 214 7.83e-116 338
MS.gene96248.t1 AT3G07750 31.111 270 162 9 11 264 3 264 1.46e-28 114
MS.gene96248.t1 AT3G07750 31.111 270 162 9 11 264 3 264 1.46e-28 114
MS.gene96248.t1 AT1G60080 27.881 269 176 5 17 269 26 292 1.30e-23 100

Find 113 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAAGTTGAACATTAAATT+TGG 0.095631 2.2:-65416138 MS.gene96248:CDS
CATAACTTAATTCCCATTAT+TGG 0.197437 2.2:+65412369 None:intergenic
TTCTTTCTGCCAAACTTGTC+TGG 0.208475 2.2:-65415867 MS.gene96248:CDS
ATTTCCTGCGCTGGTTCTTC+TGG 0.247600 2.2:+65412505 None:intergenic
TCCTTTGAGCCTGGCCGTCC+TGG 0.261790 2.2:-65415970 MS.gene96248:CDS
CTTCCAGTTGCAGTCACCTT+TGG 0.284591 2.2:-65415461 MS.gene96248:CDS
CATTATAGACCGCGGTTTAC+GGG 0.295153 2.2:-65415923 MS.gene96248:CDS
GAAAGGCGAGACAAATTTAA+TGG 0.327208 2.2:-65414555 MS.gene96248:CDS
GCATTATAGACCGCGGTTTA+CGG 0.332870 2.2:-65415924 MS.gene96248:CDS
AATCCAAAGGTGACTGCAAC+TGG 0.344185 2.2:+65415458 None:intergenic
GAATGTGATGCCACATCATT+AGG 0.345051 2.2:-65414533 MS.gene96248:CDS
GGAGAATCTGCCGTTGAGTT+AGG 0.366917 2.2:-65415949 MS.gene96248:CDS
GCAAGTTGAACATTAAATTT+GGG 0.368287 2.2:-65416137 MS.gene96248:CDS
ATTAAATTTGGGAGGGATGA+TGG 0.374567 2.2:-65416126 MS.gene96248:CDS
AGTGGATGGTCGGGGCCCCT+TGG 0.390912 2.2:-65416166 MS.gene96248:CDS
TGTGGAACCACTGCCACGTT+AGG 0.394002 2.2:-65414638 MS.gene96248:CDS
AGAAGGCCTGAATGCTCGTT+GGG 0.394350 2.2:-65415648 MS.gene96248:CDS
TCTCGCCTTTCAGCTTCAAC+TGG 0.394391 2.2:+65414567 None:intergenic
TCATTAGGCCTATCTTTGTA+AGG 0.401300 2.2:+65416039 None:intergenic
ATAGATAGTGTACCTTCATT+AGG 0.408385 2.2:+65416024 None:intergenic
ACTCACTGCATCATTTATCT+TGG 0.411650 2.2:+65415110 None:intergenic
GCGAATGGCCCAGACAAGTT+TGG 0.413491 2.2:+65415858 None:intergenic
TCTTTCTGCCAAACTTGTCT+GGG 0.424579 2.2:-65415866 MS.gene96248:CDS
CAGTCATTACAGCCTCTTCA+TGG 0.425419 2.2:+65415265 None:intergenic
TTGTGCAGCCTTACAAAGAT+AGG 0.432049 2.2:-65416047 MS.gene96248:CDS
TGGGTCTGCCGAGATTCAAT+TGG 0.439539 2.2:-65416106 MS.gene96248:CDS
GCTGATCCTTCCTTTGAGCC+TGG 0.439737 2.2:-65415979 MS.gene96248:CDS
ATTGACACTGCTCTAACTGC+TGG 0.450510 2.2:-65412463 MS.gene96248:CDS
AGCAGAGATTAGCTAATTGT+TGG 0.456222 2.2:-65416245 MS.gene96248:CDS
GCAGTTAGAGCAGTGTCAAT+TGG 0.458988 2.2:+65412466 None:intergenic
AGAGCTTCGAGTGGATGGTC+GGG 0.470323 2.2:-65416175 MS.gene96248:CDS
ATCAACTCCTAGTAAACAAA+AGG 0.472420 2.2:-65412548 MS.gene96248:CDS
GTGGAACCACTGCCACGTTA+GGG 0.484142 2.2:-65414637 MS.gene96248:CDS
GCAGATTCTCCAGGACGGCC+AGG 0.492915 2.2:+65415961 None:intergenic
TGCTGCAAATATTGCTGCAT+TGG 0.500659 2.2:-65415688 MS.gene96248:CDS
CATGAAGAGGCTGTAATGAC+TGG 0.506831 2.2:-65415264 MS.gene96248:CDS
TTAAATTTGGGAGGGATGAT+GGG 0.508701 2.2:-65416125 MS.gene96248:CDS
GGAAGATGATGTATAATCAA+AGG 0.510424 2.2:+65415479 None:intergenic
TTGAAAAGCACAACAATGAA+AGG 0.511669 2.2:-65414709 MS.gene96248:CDS
AGAGATTAGCTAATTGTTGG+CGG 0.512799 2.2:-65416242 MS.gene96248:CDS
AACTCAACGGCAGATTCTCC+AGG 0.512885 2.2:+65415952 None:intergenic
GTGTGTGCAATTCAAAAGCC+TGG 0.513608 2.2:-65415207 MS.gene96248:CDS
CAGAGCTTCGAGTGGATGGT+CGG 0.514274 2.2:-65416176 MS.gene96248:CDS
GAAGATGATGTATAATCAAA+GGG 0.519406 2.2:+65415480 None:intergenic
ACGACATTCTTCCTCTGTTG+CGG 0.519551 2.2:-65414669 MS.gene96248:CDS
ACTGTCTTGATTTCCTGCGC+TGG 0.521832 2.2:+65412496 None:intergenic
CTATCAGAGCTTCGAGTGGA+TGG 0.523011 2.2:-65416180 MS.gene96248:CDS
TCCAGGACGGCCAGGCTCAA+AGG 0.523314 2.2:+65415969 None:intergenic
AAACTTGCTCATGTTAAAGC+TGG 0.525982 2.2:-65415144 MS.gene96248:CDS
GCAGAGCGATTCAGTGTCAA+TGG 0.527593 2.2:+65415891 None:intergenic
TGAATTGACACAATCTGAGT+AGG 0.528375 2.2:+65414168 None:intergenic
GGGTCTGCCGAGATTCAATT+GGG 0.534787 2.2:-65416105 MS.gene96248:CDS
CTTCACTGAATTCTCTCCCA+TGG 0.539169 2.2:-65416001 MS.gene96248:CDS
ACATTCTTCCTCTGTTGCGG+TGG 0.540050 2.2:-65414666 MS.gene96248:CDS
GTTCAACTTGCGATAGTCCA+AGG 0.542934 2.2:+65416149 None:intergenic
CTGACACCTTACCAACTTGA+GGG 0.544181 2.2:+65414458 None:intergenic
TGGAACCACTGCCACGTTAG+GGG 0.547405 2.2:-65414636 MS.gene96248:CDS
TAAACAAAAGGATTCAAGAC+AGG 0.550828 2.2:-65412536 MS.gene96248:CDS
GAGCTTCGAGTGGATGGTCG+GGG 0.552607 2.2:-65416174 MS.gene96248:CDS
CAGAAGGCCTGAATGCTCGT+TGG 0.553951 2.2:-65415649 MS.gene96248:CDS
TTTCAGCAATGAAAATCTTG+TGG 0.555730 2.2:-65415435 MS.gene96248:intron
TCTGTTGCGGTGGATGTATG+TGG 0.557391 2.2:-65414656 MS.gene96248:CDS
TGAAAAGCACAACAATGAAA+GGG 0.559466 2.2:-65414708 MS.gene96248:CDS
ACTGCTGGGCAGAGTAATGA+AGG 0.560209 2.2:-65412448 MS.gene96248:CDS
GTTGAACATTAAATTTGGGA+GGG 0.560586 2.2:-65416133 MS.gene96248:CDS
CAATCAGATGGTGATAAAGA+AGG 0.565707 2.2:-65414602 MS.gene96248:CDS
TACAAAGATAGGCCTAATGA+AGG 0.565777 2.2:-65416036 MS.gene96248:CDS
ACCCTGCATTGTCTAGTATG+TGG 0.565903 2.2:+65415827 None:intergenic
CTAGACCAGTTGAAGCTGAA+AGG 0.569023 2.2:-65414572 MS.gene96248:CDS
ACTGCAACAGTTAATGCAAA+TGG 0.570124 2.2:-65415234 MS.gene96248:CDS
TGTGTGCAATTCAAAAGCCT+GGG 0.572264 2.2:-65415206 MS.gene96248:CDS
CTGTCAAGCCCAAGAACAAG+AGG 0.572717 2.2:-65412408 MS.gene96248:CDS
AGTTGAACATTAAATTTGGG+AGG 0.574931 2.2:-65416134 MS.gene96248:CDS
TTCAACTTGCGATAGTCCAA+GGG 0.575404 2.2:+65416150 None:intergenic
CTCAAAGGAAGGATCAGCCA+TGG 0.576940 2.2:+65415984 None:intergenic
TAAGCCAGAAGAACCAGCGC+AGG 0.581328 2.2:-65412509 MS.gene96248:CDS
AAGGCCTGAATGCTCGTTGG+GGG 0.582507 2.2:-65415646 MS.gene96248:CDS
GTGCAGAGTAGCAAGAAGGA+TGG 0.583283 2.2:-65414506 MS.gene96248:CDS
GAATTGACACAATCTGAGTA+GGG 0.583687 2.2:+65414169 None:intergenic
GGAAAACAAAATCAATCAGA+TGG 0.587328 2.2:-65414614 MS.gene96248:CDS
ACTGACACCTTACCAACTTG+AGG 0.591237 2.2:+65414457 None:intergenic
TGATGTATAATCAAAGGGAG+TGG 0.594545 2.2:+65415485 None:intergenic
GGAACCACTGCCACGTTAGG+GGG 0.597428 2.2:-65414635 MS.gene96248:CDS
GGACGGCCAGGCTCAAAGGA+AGG 0.597532 2.2:+65415973 None:intergenic
CTGAGGAAGCTGACCTCAGG+AGG 0.600233 2.2:+65415594 None:intergenic
TTGACACTGCTCTAACTGCT+GGG 0.600516 2.2:-65412462 MS.gene96248:CDS
TTATCGGTGGCCCCTCAAGT+TGG 0.600638 2.2:-65414469 MS.gene96248:intron
TAATGAAGGTAAGACTCTGA+AGG 0.603765 2.2:-65412434 MS.gene96248:CDS
GAAGGCCTGAATGCTCGTTG+GGG 0.609514 2.2:-65415647 MS.gene96248:CDS
ATCCACATACTAGACAATGC+AGG 0.610994 2.2:-65415829 MS.gene96248:CDS
TGTCTCGCCCAATTGAATCT+CGG 0.613955 2.2:+65416098 None:intergenic
ACAAGTGCAGAGTAGCAAGA+AGG 0.616848 2.2:-65414510 MS.gene96248:CDS
CATCTCTGAAGACATTCAGA+AGG 0.617687 2.2:-65415665 MS.gene96248:CDS
ACAGCCTCTTCATGGTATGT+CGG 0.618076 2.2:+65415273 None:intergenic
CTGCACTTGTCCTAATGATG+TGG 0.618547 2.2:+65414523 None:intergenic
TCAAAGGAAGGATCAGCCAT+GGG 0.631822 2.2:+65415985 None:intergenic
AGGCCTGAATGCTCGTTGGG+GGG 0.639267 2.2:-65415645 MS.gene96248:CDS
TCCACATACTAGACAATGCA+GGG 0.639330 2.2:-65415828 MS.gene96248:intron
AGTTGTAGTGCATCCTCCTG+AGG 0.641826 2.2:-65415607 MS.gene96248:intron
AAAGCTTCTCTAGCTTCTCG+TGG 0.641908 2.2:-65414136 MS.gene96248:intron
TATAATGCGTCCTAACTCAA+CGG 0.642138 2.2:+65415939 None:intergenic
GGATCCGACATACCATGAAG+AGG 0.653779 2.2:-65415277 MS.gene96248:CDS
CTCTACTTTCCCGTAAACCG+CGG 0.664238 2.2:+65415914 None:intergenic
TCTTCTATCAGAGCTTCGAG+TGG 0.667601 2.2:-65416184 MS.gene96248:CDS
TGACACCTTACCAACTTGAG+GGG 0.669214 2.2:+65414459 None:intergenic
TATGTGGATGTCAATGCGAA+TGG 0.686074 2.2:+65415843 None:intergenic
GTGCAATTCAAAAGCCTGGG+GGG 0.686221 2.2:-65415203 MS.gene96248:CDS
CAACGGCAGATTCTCCAGGA+CGG 0.698913 2.2:+65415956 None:intergenic
ACATACATCCACCGCAACAG+AGG 0.701182 2.2:+65414658 None:intergenic
GTGTGCAATTCAAAAGCCTG+GGG 0.708877 2.2:-65415205 MS.gene96248:CDS
TCAACTTGCGATAGTCCAAG+GGG 0.732414 2.2:+65416151 None:intergenic
TTAGGACGCATTATAGACCG+CGG 0.761510 2.2:-65415931 MS.gene96248:CDS
TGTGCAATTCAAAAGCCTGG+GGG 0.776295 2.2:-65415204 MS.gene96248:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAATAATAATCTAC+AGG + chr2.2:65415407-65415426 None:intergenic 10.0%
!! ATAAAAAAAAAAAATTACAG+AGG - chr2.2:65415565-65415584 MS.gene96248:intron 10.0%
!! ATAAAAAATAATAATCTACA+GGG + chr2.2:65415406-65415425 None:intergenic 10.0%
!! TAAAAAAAAAAAATTACAGA+GGG - chr2.2:65415566-65415585 MS.gene96248:intron 10.0%
!!! TTCATATATTTTATAATCAT+TGG - chr2.2:65415948-65415967 MS.gene96248:CDS 10.0%
!!! TTGAAAATTTTCTTATAAAT+AGG + chr2.2:65415118-65415137 None:intergenic 10.0%
!! AAAAAAAAAAAATTACAGAG+GGG - chr2.2:65415567-65415586 MS.gene96248:intron 15.0%
!! AAAACAAAAAAAATTTACAG+GGG + chr2.2:65415433-65415452 None:intergenic 15.0%
!! ATATATACCAAAATCAAAAA+AGG + chr2.2:65413282-65413301 None:intergenic 15.0%
!! CAAAACAAAAAAAATTTACA+GGG + chr2.2:65415434-65415453 None:intergenic 15.0%
!! GTAATTTAACAAAACAATAA+GGG - chr2.2:65415051-65415070 MS.gene96248:intron 15.0%
!! TAAAAAATAATAATCTACAG+GGG + chr2.2:65415405-65415424 None:intergenic 15.0%
!! TTTAGATAAAATTGTTCAAT+TGG - chr2.2:65414661-65414680 MS.gene96248:CDS 15.0%
!!! AAAACAATTTTTTTTTACAG+GGG - chr2.2:65415540-65415559 MS.gene96248:intron 15.0%
!!! CAAAACAATTTTTTTTTACA+GGG - chr2.2:65415539-65415558 MS.gene96248:intron 15.0%
!! AAAAAAACATCTTCCAATAA+TGG - chr2.2:65416242-65416261 MS.gene96248:CDS 20.0%
!! AAAAAACATCTTCCAATAAT+GGG - chr2.2:65416243-65416262 MS.gene96248:CDS 20.0%
!! AAACAAAAAAAATTTACAGG+GGG + chr2.2:65415432-65415451 None:intergenic 20.0%
!! ATGCAACATTAATTATTGTT+TGG + chr2.2:65415637-65415656 None:intergenic 20.0%
!! CCAAAACAAAAAAAATTTAC+AGG + chr2.2:65415435-65415454 None:intergenic 20.0%
!! GGTAATTTAACAAAACAATA+AGG - chr2.2:65415050-65415069 MS.gene96248:intron 20.0%
!! TGCAACATTAATTATTGTTT+GGG + chr2.2:65415636-65415655 None:intergenic 20.0%
!! TTCTGCAAAAAAAAAAAAGT+TGG - chr2.2:65415488-65415507 MS.gene96248:CDS 20.0%
!!! AAGCATGAAAATTTTCATAA+CGG + chr2.2:65413802-65413821 None:intergenic 20.0%
!!! AATCAAAAGTTATTAGTTCT+TGG + chr2.2:65414196-65414215 None:intergenic 20.0%
!!! AATTTTCTTATAAATAGGAC+CGG + chr2.2:65415113-65415132 None:intergenic 20.0%
!!! ATTACTTTTATCTGTCATTT+TGG - chr2.2:65414368-65414387 MS.gene96248:intron 20.0%
!!! ATTTTATCTAAACAAATGAG+AGG + chr2.2:65414653-65414672 None:intergenic 20.0%
!!! CCAAAACAATTTTTTTTTAC+AGG - chr2.2:65415538-65415557 MS.gene96248:intron 20.0%
!!! CCTGTAAAAAAAAATTGTTT+TGG + chr2.2:65415541-65415560 None:intergenic 20.0%
!!! CCTGTAAATTTTTTTTGTTT+TGG - chr2.2:65415432-65415451 MS.gene96248:intron 20.0%
!!! GATTTCAATTTTTGGAATTT+TGG + chr2.2:65414615-65414634 None:intergenic 20.0%
!!! TATTTTTGAATGACCTATTA+GGG + chr2.2:65415464-65415483 None:intergenic 20.0%
!!! TGGTTTCTTTTCTTATATAA+AGG - chr2.2:65415343-65415362 MS.gene96248:intron 20.0%
!!! TTATTTTTGAATGACCTATT+AGG + chr2.2:65415465-65415484 None:intergenic 20.0%
!!! TTTTGATTAAGCATTTAAAC+TGG - chr2.2:65414558-65414577 MS.gene96248:CDS 20.0%
! AAAAGACCAACATTAAATGA+GGG + chr2.2:65415216-65415235 None:intergenic 25.0%
! AACAAAACAATAAGGGTTAA+TGG - chr2.2:65415058-65415077 MS.gene96248:intron 25.0%
! ACTATAAATAACAGTCTTTG+AGG + chr2.2:65414263-65414282 None:intergenic 25.0%
! ATGGGATAATAAATGAGTAA+AGG + chr2.2:65414868-65414887 None:intergenic 25.0%
! CTATAAATAACAGTCTTTGA+GGG + chr2.2:65414262-65414281 None:intergenic 25.0%
! GAAGATGATGTATAATCAAA+GGG + chr2.2:65413147-65413166 None:intergenic 25.0%
! GATAATATGATATGTATTGC+AGG - chr2.2:65413108-65413127 MS.gene96248:intron 25.0%
! GATTATGGAATGTATATTGT+TGG - chr2.2:65413860-65413879 MS.gene96248:intron 25.0%
! TATGTTGAGGTAAAAATACT+TGG - chr2.2:65414413-65414432 MS.gene96248:intron 25.0%
! TCTCTGTAATAACTAACTAA+GGG - chr2.2:65414931-65414950 MS.gene96248:intron 25.0%
! TCTTAAAATGACAACTAGAA+GGG + chr2.2:65414783-65414802 None:intergenic 25.0%
! TGATAATATGGAAACCTATA+TGG - chr2.2:65414291-65414310 MS.gene96248:intron 25.0%
! TGTGACTCTTTCTTATAAAT+AGG + chr2.2:65415154-65415173 None:intergenic 25.0%
!! ACTGCAATGATTTCAATTTT+TGG + chr2.2:65414623-65414642 None:intergenic 25.0%
!! AGACTGTTATTTATAGTCAA+TGG - chr2.2:65414266-65414285 MS.gene96248:intron 25.0%
!! ATTTTTGAATGACCTATTAG+GGG + chr2.2:65415463-65415482 None:intergenic 25.0%
!! GATTTGTTTATCTACAACTA+AGG - chr2.2:65412869-65412888 MS.gene96248:intron 25.0%
!! GCAAGTTGAACATTAAATTT+GGG - chr2.2:65412487-65412506 MS.gene96248:CDS 25.0%
!! TCTTTTCTTATATAAAGGAC+CGG - chr2.2:65415348-65415367 MS.gene96248:intron 25.0%
!! TTTTTATGCGTAAAGATTTG+AGG - chr2.2:65413542-65413561 MS.gene96248:intron 25.0%
!!! AATGTTGGTCTTTTCAATAT+TGG - chr2.2:65415222-65415241 MS.gene96248:CDS 25.0%
!!! AATTTCTTTTGTTGTCTGAA+TGG - chr2.2:65413885-65413904 MS.gene96248:intron 25.0%
!!! ATACATGCCTTTTTTGATTT+TGG - chr2.2:65413272-65413291 MS.gene96248:intron 25.0%
!!! ATACTTCACAAATTTTGATG+AGG - chr2.2:65415260-65415279 MS.gene96248:CDS 25.0%
!!! CTAACTAAGGGTAATTTTTT+TGG - chr2.2:65414943-65414962 MS.gene96248:intron 25.0%
!!! TAAATGAGTAAAGGTACTAT+AGG + chr2.2:65414859-65414878 None:intergenic 25.0%
!!! TACTTCACAAATTTTGATGA+GGG - chr2.2:65415261-65415280 MS.gene96248:CDS 25.0%
!!! TAGTCAATGGATTGATAATA+TGG - chr2.2:65414279-65414298 MS.gene96248:intron 25.0%
!!! TTGATTTTGGTATATATACG+AGG - chr2.2:65413285-65413304 MS.gene96248:intron 25.0%
AACATAGACAAAACTCAGAA+TGG + chr2.2:65414399-65414418 None:intergenic 30.0%
ACCTGATTCATTATTCTACA+AGG - chr2.2:65415803-65415822 MS.gene96248:intron 30.0%
AGATAAACAAATCAGCAAGT+TGG + chr2.2:65412862-65412881 None:intergenic 30.0%
AGTTGAACATTAAATTTGGG+AGG - chr2.2:65412490-65412509 MS.gene96248:CDS 30.0%
ATAGATAGTGTACCTTCATT+AGG + chr2.2:65412603-65412622 None:intergenic 30.0%
ATCAACTCCTAGTAAACAAA+AGG - chr2.2:65416076-65416095 MS.gene96248:CDS 30.0%
ATTGCATTATCAATTGCGTA+TGG - chr2.2:65413838-65413857 MS.gene96248:intron 30.0%
CAAGATTATAGTGAAAGTGA+AGG + chr2.2:65414525-65414544 None:intergenic 30.0%
CTCTCTGTAATAACTAACTA+AGG - chr2.2:65414930-65414949 MS.gene96248:intron 30.0%
CTTAACACCAAACACAAAAT+GGG + chr2.2:65413622-65413641 None:intergenic 30.0%
CTTCACTTTCACTATAATCT+TGG - chr2.2:65414523-65414542 MS.gene96248:CDS 30.0%
GAAAAGACCAACATTAAATG+AGG + chr2.2:65415217-65415236 None:intergenic 30.0%
GAAATGACCTATATTACAGA+GGG - chr2.2:65415596-65415615 MS.gene96248:intron 30.0%
GACAATGCATAATATATGCA+AGG + chr2.2:65414994-65415013 None:intergenic 30.0%
GATAAACAAATCAGCAAGTT+GGG + chr2.2:65412861-65412880 None:intergenic 30.0%
GGAAAACAAAATCAATCAGA+TGG - chr2.2:65414010-65414029 MS.gene96248:intron 30.0%
GGAAGATGATGTATAATCAA+AGG + chr2.2:65413148-65413167 None:intergenic 30.0%
GTCTTAAAATGACAACTAGA+AGG + chr2.2:65414784-65414803 None:intergenic 30.0%
GTTATTACAGAGAGAATTGA+TGG + chr2.2:65414892-65414911 None:intergenic 30.0%
GTTGAACATTAAATTTGGGA+GGG - chr2.2:65412491-65412510 MS.gene96248:CDS 30.0%
TAAACAAAAGGATTCAAGAC+AGG - chr2.2:65416088-65416107 MS.gene96248:CDS 30.0%
TATGTGAATGTCTTCTAAAC+AGG + chr2.2:65414713-65414732 None:intergenic 30.0%
TCCTTGTAGAATAATGAATC+AGG + chr2.2:65415807-65415826 None:intergenic 30.0%
TCTGTAATATAGGTCATTTC+CGG + chr2.2:65415596-65415615 None:intergenic 30.0%
TTACACATACTAAGATGATC+AGG - chr2.2:65414807-65414826 MS.gene96248:intron 30.0%
TTCATTGCTGAAAAATCCAA+AGG + chr2.2:65413182-65413201 None:intergenic 30.0%
TTCTAACCCTCATTTAATGT+TGG - chr2.2:65415207-65415226 MS.gene96248:CDS 30.0%
TTGAAATCATTGCAGTACTA+AGG - chr2.2:65414627-65414646 MS.gene96248:CDS 30.0%
TTGGTATATATACGAGGTAA+TGG - chr2.2:65413291-65413310 MS.gene96248:intron 30.0%
TTTCAGCAATGAAAATCTTG+TGG - chr2.2:65413189-65413208 MS.gene96248:intron 30.0%
! CGCAAGTTGAACATTAAATT+TGG - chr2.2:65412486-65412505 MS.gene96248:CDS 30.0%
! GATTTTATATGATGCTCTCT+AGG - chr2.2:65413320-65413339 MS.gene96248:intron 30.0%
! GGAAGCTCAAAGAATTTTAT+CGG - chr2.2:65414139-65414158 MS.gene96248:CDS 30.0%
! GGTTTTTGAATGACCTATTA+GGG - chr2.2:65415509-65415528 MS.gene96248:intron 30.0%
! GTTTTTGAATGACCTATTAG+GGG - chr2.2:65415510-65415529 MS.gene96248:intron 30.0%
! TATCAATTGCGTATGGATTA+TGG - chr2.2:65413845-65413864 MS.gene96248:intron 30.0%
! TGAAAAGCACAACAATGAAA+GGG - chr2.2:65413916-65413935 MS.gene96248:intron 30.0%
! TGGTTTTTGAATGACCTATT+AGG - chr2.2:65415508-65415527 MS.gene96248:intron 30.0%
! TGTTTTACCCTCTGTAATAT+AGG + chr2.2:65415606-65415625 None:intergenic 30.0%
! TTGAAAAGCACAACAATGAA+AGG - chr2.2:65413915-65413934 MS.gene96248:intron 30.0%
! TTTTTCTTCCTCTTGTTCTT+GGG + chr2.2:65416227-65416246 None:intergenic 30.0%
! TTTTTGAATGACCTATTAGG+GGG - chr2.2:65415511-65415530 MS.gene96248:intron 30.0%
! TTTTTGAATGACCTATTAGG+GGG + chr2.2:65415530-65415511 None:intergenic 30.0%
!! ATCAGGTTGAGATTTATGTA+TGG + chr2.2:65415790-65415809 None:intergenic 30.0%
!! CTTGAATCCTTTTGTTTACT+AGG + chr2.2:65416086-65416105 None:intergenic 30.0%
!! TTGGTCTTTTCAATATTGGT+GGG - chr2.2:65415226-65415245 MS.gene96248:CDS 30.0%
!!! ACTAAGGGTAATTTTTTTGG+TGG - chr2.2:65414946-65414965 MS.gene96248:intron 30.0%
!!! GTCTTGGTTTTGATGATTTT+TGG - chr2.2:65415323-65415342 MS.gene96248:intron 30.0%
!!! TTTTTTCTTCCTCTTGTTCT+TGG + chr2.2:65416228-65416247 None:intergenic 30.0%
AAAAATTACAGAGGGGAAAC+CGG - chr2.2:65415574-65415593 MS.gene96248:intron 35.0%
AAATGACAACTAGAAGGGAA+CGG + chr2.2:65414778-65414797 None:intergenic 35.0%
ACAGAGAGAATTGATGGAAT+GGG + chr2.2:65414886-65414905 None:intergenic 35.0%
ACTCACTGCATCATTTATCT+TGG + chr2.2:65413517-65413536 None:intergenic 35.0%
ACTGCAACAGTTAATGCAAA+TGG - chr2.2:65413390-65413409 MS.gene96248:intron 35.0%
ATATGATGCTCTCTAGGTAT+TGG - chr2.2:65413326-65413345 MS.gene96248:intron 35.0%
ATTAAATTTGGGAGGGATGA+TGG - chr2.2:65412498-65412517 MS.gene96248:CDS 35.0%
ATTTCATTTCTGCGTTTGGT+TGG - chr2.2:65415873-65415892 MS.gene96248:CDS 35.0%
CAATCAGATGGTGATAAAGA+AGG - chr2.2:65414022-65414041 MS.gene96248:intron 35.0%
CATATTATCGATAACTGCTG+CGG + chr2.2:65413097-65413116 None:intergenic 35.0%
CGGAAGCTAAATAGAAAACA+GGG + chr2.2:65413077-65413096 None:intergenic 35.0%
GAAAGGCGAGACAAATTTAA+TGG - chr2.2:65414069-65414088 MS.gene96248:intron 35.0%
GAATGTCTTCTAAACAGGAT+GGG + chr2.2:65414708-65414727 None:intergenic 35.0%
GAATTGACACAATCTGAGTA+GGG + chr2.2:65414458-65414477 None:intergenic 35.0%
GACAACGAAAAAGGAACAAA+GGG - chr2.2:65415719-65415738 MS.gene96248:intron 35.0%
GCAACAACTAATGATTGTCT+TGG - chr2.2:65415307-65415326 MS.gene96248:intron 35.0%
GCTTAACACCAAACACAAAA+TGG + chr2.2:65413623-65413642 None:intergenic 35.0%
GGAAATGACCTATATTACAG+AGG - chr2.2:65415595-65415614 MS.gene96248:intron 35.0%
GGAAGCTAAATAGAAAACAG+GGG + chr2.2:65413076-65413095 None:intergenic 35.0%
TAATAATCTACAGGGGAAAC+CGG + chr2.2:65415398-65415417 None:intergenic 35.0%
TAATGAAGGTAAGACTCTGA+AGG - chr2.2:65416190-65416209 MS.gene96248:CDS 35.0%
TACAAAGATAGGCCTAATGA+AGG - chr2.2:65412588-65412607 MS.gene96248:intron 35.0%
TACAGAGAGAATTGATGGAA+TGG + chr2.2:65414887-65414906 None:intergenic 35.0%
TATAATGCGTCCTAACTCAA+CGG + chr2.2:65412688-65412707 None:intergenic 35.0%
TCATTAGGCCTATCTTTGTA+AGG + chr2.2:65412588-65412607 None:intergenic 35.0%
TCTTCTGCTTATAAGTCTTC+TGG - chr2.2:65413678-65413697 MS.gene96248:intron 35.0%
TGAATGTCTTCTAAACAGGA+TGG + chr2.2:65414709-65414728 None:intergenic 35.0%
TGAATTGACACAATCTGAGT+AGG + chr2.2:65414459-65414478 None:intergenic 35.0%
TGATGTATAATCAAAGGGAG+TGG + chr2.2:65413142-65413161 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+CGG + chr2.2:65414989-65415008 None:intergenic 35.0%
TGTACCATTGTAAAATGAGC+AGG - chr2.2:65416050-65416069 MS.gene96248:CDS 35.0%
TGTATGGCTGTGAAAAGTAA+TGG + chr2.2:65415774-65415793 None:intergenic 35.0%
TTAAATTTGGGAGGGATGAT+GGG - chr2.2:65412499-65412518 MS.gene96248:CDS 35.0%
TTCAAATGCGACAACGAAAA+AGG - chr2.2:65415710-65415729 MS.gene96248:intron 35.0%
TTCTTATAAATAGGACCGGA+GGG + chr2.2:65415109-65415128 None:intergenic 35.0%
TTCTTATATAAAGGACCGGA+GGG - chr2.2:65415352-65415371 MS.gene96248:intron 35.0%
TTGACACGTTTATGCCATAT+AGG + chr2.2:65414308-65414327 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG + chr2.2:65415110-65415129 None:intergenic 35.0%
TTTCTTATATAAAGGACCGG+AGG - chr2.2:65415351-65415370 MS.gene96248:intron 35.0%
! AAACTTGCTCATGTTAAAGC+TGG - chr2.2:65413480-65413499 MS.gene96248:intron 35.0%
! AGAGATTAGCTAATTGTTGG+CGG - chr2.2:65412382-65412401 MS.gene96248:CDS 35.0%
! AGCAGAGATTAGCTAATTGT+TGG - chr2.2:65412379-65412398 MS.gene96248:CDS 35.0%
! AGCTCAAAGAATTTTATCGG+TGG - chr2.2:65414142-65414161 MS.gene96248:CDS 35.0%
! ATCATCTCCCATTTTGTGTT+TGG - chr2.2:65413612-65413631 MS.gene96248:intron 35.0%
! GTTGATTTCATTTCTGCGTT+TGG - chr2.2:65415869-65415888 MS.gene96248:CDS 35.0%
! TGTGAGGTTTTCGTTTAGAT+AGG - chr2.2:65415830-65415849 MS.gene96248:CDS 35.0%
! TTGTCCTGCTCATTTTACAA+TGG + chr2.2:65416057-65416076 None:intergenic 35.0%
! TTTGATAGTCTAGCTGTTTC+TGG - chr2.2:65414235-65414254 MS.gene96248:intron 35.0%
! TTTGTTGTCTGAATGGATGT+AGG - chr2.2:65413892-65413911 MS.gene96248:intron 35.0%
!! TCTGAGTTTTGTCTATGTTG+AGG - chr2.2:65414400-65414419 MS.gene96248:intron 35.0%
!!! GAGGGAGTATTGTTTTACAT+GGG + chr2.2:65414756-65414775 None:intergenic 35.0%
!!! GTAATTTTTTTGGTGGTGTC+CGG - chr2.2:65414953-65414972 MS.gene96248:intron 35.0%
!!! GTTGGTCTTTTCAATATTGG+TGG - chr2.2:65415225-65415244 MS.gene96248:CDS 35.0%
!!! TAATTTTTTTGGTGGTGTCC+GGG - chr2.2:65414954-65414973 MS.gene96248:intron 35.0%
AAATAGAAAACAGGGGCGAA+AGG + chr2.2:65413069-65413088 None:intergenic 40.0%
AAGCTCTTGGAGACAACTAA+GGG - chr2.2:65415029-65415048 MS.gene96248:intron 40.0%
AGATGCATCGTTCTGTTCAT+AGG + chr2.2:65413585-65413604 None:intergenic 40.0%
ATCCACATACTAGACAATGC+AGG - chr2.2:65412795-65412814 MS.gene96248:intron 40.0%
CACTCTATTTAGCTGCACTT+AGG - chr2.2:65414582-65414601 MS.gene96248:CDS 40.0%
CATAATATATGCAAGGTCCG+GGG + chr2.2:65414987-65415006 None:intergenic 40.0%
CGACAACGAAAAAGGAACAA+AGG - chr2.2:65415718-65415737 MS.gene96248:intron 40.0%
GAACAAAGGGAGTAATGTAG+AGG - chr2.2:65415732-65415751 MS.gene96248:intron 40.0%
GAATGTGATGCCACATCATT+AGG - chr2.2:65414091-65414110 MS.gene96248:intron 40.0%
GCATAATATATGCAAGGTCC+GGG + chr2.2:65414988-65415007 None:intergenic 40.0%
GCGGAAGCTAAATAGAAAAC+AGG + chr2.2:65413078-65413097 None:intergenic 40.0%
TAAGCTCTTGGAGACAACTA+AGG - chr2.2:65415028-65415047 MS.gene96248:intron 40.0%
TACCAACTGAGTTAAGCTCT+TGG - chr2.2:65415016-65415035 MS.gene96248:intron 40.0%
TATGTGGATGTCAATGCGAA+TGG + chr2.2:65412784-65412803 None:intergenic 40.0%
TCCACATACTAGACAATGCA+GGG - chr2.2:65412796-65412815 MS.gene96248:intron 40.0%
TCTTTCTGCCAAACTTGTCT+GGG - chr2.2:65412758-65412777 MS.gene96248:intron 40.0%
TGCAATGAAAGGCAAACAGA+AGG + chr2.2:65413739-65413758 None:intergenic 40.0%
TGCTGCAAATATTGCTGCAT+TGG - chr2.2:65412936-65412955 MS.gene96248:intron 40.0%
TGTGTGCAATTCAAAAGCCT+GGG - chr2.2:65413418-65413437 MS.gene96248:intron 40.0%
TTCAACTTGCGATAGTCCAA+GGG + chr2.2:65412477-65412496 None:intergenic 40.0%
TTCTTTCTGCCAAACTTGTC+TGG - chr2.2:65412757-65412776 MS.gene96248:intron 40.0%
TTGTGCAGCCTTACAAAGAT+AGG - chr2.2:65412577-65412596 MS.gene96248:intron 40.0%
! ACCGGAGGGAGTATATTATA+GGG + chr2.2:65415095-65415114 None:intergenic 40.0%
! ACTTGGTCTTTCACTTCTCA+GGG - chr2.2:65414430-65414449 MS.gene96248:intron 40.0%
! AGAGCTTAACTCAGTTGGTA+AGG + chr2.2:65415016-65415035 None:intergenic 40.0%
! CATCTCTGAAGACATTCAGA+AGG - chr2.2:65412959-65412978 MS.gene96248:intron 40.0%
! TACTTGGTCTTTCACTTCTC+AGG - chr2.2:65414429-65414448 MS.gene96248:intron 40.0%
! TATTCTACAAGGAGTGTGTG+AGG - chr2.2:65415814-65415833 MS.gene96248:intron 40.0%
!! CATAGGCATTGAAAGAGTGA+GGG + chr2.2:65413568-65413587 None:intergenic 40.0%
!! GTAGGTCATTGACTCATTTC+CGG - chr2.2:65415376-65415395 MS.gene96248:intron 40.0%
!! TCATAGGCATTGAAAGAGTG+AGG + chr2.2:65413569-65413588 None:intergenic 40.0%
!!! AATTTTTTTGGTGGTGTCCG+GGG - chr2.2:65414955-65414974 MS.gene96248:intron 40.0%
!!! ATTTTGTTTTCCCCCTAACG+TGG + chr2.2:65414002-65414021 None:intergenic 40.0%
!!! GGAGGGAGTATTGTTTTACA+TGG + chr2.2:65414757-65414776 None:intergenic 40.0%
!!! GTTTTGGAATACCCCCTAAT+AGG - chr2.2:65415448-65415467 MS.gene96248:CDS 40.0%
!!! GTTTTGGAATACCCCCTAAT+AGG + chr2.2:65415467-65415448 None:intergenic 40.0%
AAGGTCACGCTGTTAAACTG+AGG + chr2.2:65413050-65413069 None:intergenic 45.0%
AATCCAAAGGTGACTGCAAC+TGG + chr2.2:65413169-65413188 None:intergenic 45.0%
ACAAGTGCAGAGTAGCAAGA+AGG - chr2.2:65414114-65414133 MS.gene96248:intron 45.0%
ACAGCCTCTTCATGGTATGT+CGG + chr2.2:65413354-65413373 None:intergenic 45.0%
ACCCTGCATTGTCTAGTATG+TGG + chr2.2:65412800-65412819 None:intergenic 45.0%
ACGACATTCTTCCTCTGTTG+CGG - chr2.2:65413955-65413974 MS.gene96248:intron 45.0%
ACTGACACCTTACCAACTTG+AGG + chr2.2:65414170-65414189 None:intergenic 45.0%
ATTGACACTGCTCTAACTGC+TGG - chr2.2:65416161-65416180 MS.gene96248:CDS 45.0%
CAGTCATTACAGCCTCTTCA+TGG + chr2.2:65413362-65413381 None:intergenic 45.0%
CATGAAGAGGCTGTAATGAC+TGG - chr2.2:65413360-65413379 MS.gene96248:intron 45.0%
CATTATAGACCGCGGTTTAC+GGG - chr2.2:65412701-65412720 MS.gene96248:intron 45.0%
CCCCTATAATATACTCCCTC+CGG - chr2.2:65415091-65415110 MS.gene96248:intron 45.0%
CTAGACCAGTTGAAGCTGAA+AGG - chr2.2:65414052-65414071 MS.gene96248:intron 45.0%
CTCCAAGAGCTTAACTCAGT+TGG + chr2.2:65415021-65415040 None:intergenic 45.0%
CTGACACCTTACCAACTTGA+GGG + chr2.2:65414169-65414188 None:intergenic 45.0%
CTGCACTTGTCCTAATGATG+TGG + chr2.2:65414104-65414123 None:intergenic 45.0%
CTTCACTGAATTCTCTCCCA+TGG - chr2.2:65412623-65412642 MS.gene96248:intron 45.0%
GCACACTTCACTGCAATGAA+AGG + chr2.2:65413750-65413769 None:intergenic 45.0%
GCAGTTAGAGCAGTGTCAAT+TGG + chr2.2:65416161-65416180 None:intergenic 45.0%
GCATTATAGACCGCGGTTTA+CGG - chr2.2:65412700-65412719 MS.gene96248:intron 45.0%
GTGTGCAATTCAAAAGCCTG+GGG - chr2.2:65413419-65413438 MS.gene96248:intron 45.0%
GTGTGTGCAATTCAAAAGCC+TGG - chr2.2:65413417-65413436 MS.gene96248:intron 45.0%
GTTCAACTTGCGATAGTCCA+AGG + chr2.2:65412478-65412497 None:intergenic 45.0%
TCAAAGGAAGGATCAGCCAT+GGG + chr2.2:65412642-65412661 None:intergenic 45.0%
TCAACTTGCGATAGTCCAAG+GGG + chr2.2:65412476-65412495 None:intergenic 45.0%
TCTTCTATCAGAGCTTCGAG+TGG - chr2.2:65412440-65412459 MS.gene96248:CDS 45.0%
TGACACCTTACCAACTTGAG+GGG + chr2.2:65414168-65414187 None:intergenic 45.0%
TGTCTCGCCCAATTGAATCT+CGG + chr2.2:65412529-65412548 None:intergenic 45.0%
TGTCTTCTAAACAGGATGGG+TGG + chr2.2:65414705-65414724 None:intergenic 45.0%
TGTGCAATTCAAAAGCCTGG+GGG - chr2.2:65413420-65413439 MS.gene96248:intron 45.0%
TTAGGACGCATTATAGACCG+CGG - chr2.2:65412693-65412712 MS.gene96248:intron 45.0%
TTGACACTGCTCTAACTGCT+GGG - chr2.2:65416162-65416181 MS.gene96248:CDS 45.0%
! AAAGCTTCTCTAGCTTCTCG+TGG - chr2.2:65414488-65414507 MS.gene96248:CDS 45.0%
! CAGCAAGTTGGGTAAGAAAG+AGG + chr2.2:65412850-65412869 None:intergenic 45.0%
! CCGGAGGGAGTATATTATAG+GGG + chr2.2:65415094-65415113 None:intergenic 45.0%
! CGGAGGGAGTATATTATAGG+GGG + chr2.2:65415093-65415112 None:intergenic 45.0%
! GACCGGAGGGAGTATATTAT+AGG + chr2.2:65415096-65415115 None:intergenic 45.0%
! GAGGGAGTATATTATAGGGG+GGG + chr2.2:65415091-65415110 None:intergenic 45.0%
! GGAGGGAGTATATTATAGGG+GGG + chr2.2:65415092-65415111 None:intergenic 45.0%
!!! AAAATTTTCAAAAATTTTTT+TGG - chr2.2:65415127-65415146 MS.gene96248:CDS 5.0%
AAACTGAGGAAGCTGACCTC+AGG + chr2.2:65413036-65413055 None:intergenic 50.0%
AACTCAACGGCAGATTCTCC+AGG + chr2.2:65412675-65412694 None:intergenic 50.0%
ACATACATCCACCGCAACAG+AGG + chr2.2:65413969-65413988 None:intergenic 50.0%
ACATTCTTCCTCTGTTGCGG+TGG - chr2.2:65413958-65413977 MS.gene96248:intron 50.0%
ACTGCTGGGCAGAGTAATGA+AGG - chr2.2:65416176-65416195 MS.gene96248:CDS 50.0%
ACTGTCTTGATTTCCTGCGC+TGG + chr2.2:65416131-65416150 None:intergenic 50.0%
AGAAGGCCTGAATGCTCGTT+GGG - chr2.2:65412976-65412995 MS.gene96248:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr2.2:65413239-65413258 None:intergenic 50.0%
AGTCAATGACCTACTCCCTC+CGG + chr2.2:65415370-65415389 None:intergenic 50.0%
AGTTGTAGTGCATCCTCCTG+AGG - chr2.2:65413017-65413036 MS.gene96248:intron 50.0%
CTATCAGAGCTTCGAGTGGA+TGG - chr2.2:65412444-65412463 MS.gene96248:CDS 50.0%
CTCAAAGGAAGGATCAGCCA+TGG + chr2.2:65412643-65412662 None:intergenic 50.0%
CTCTACTTTCCCGTAAACCG+CGG + chr2.2:65412713-65412732 None:intergenic 50.0%
CTGTCAAGCCCAAGAACAAG+AGG - chr2.2:65416216-65416235 MS.gene96248:CDS 50.0%
CTTCCAGTTGCAGTCACCTT+TGG - chr2.2:65413163-65413182 MS.gene96248:intron 50.0%
GACAACTAGAAGGGAACGGA+GGG + chr2.2:65414774-65414793 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr2.2:65413240-65413259 None:intergenic 50.0%
GCAGAGCGATTCAGTGTCAA+TGG + chr2.2:65412736-65412755 None:intergenic 50.0%
GGAGAATCTGCCGTTGAGTT+AGG - chr2.2:65412675-65412694 MS.gene96248:intron 50.0%
GGATCCGACATACCATGAAG+AGG - chr2.2:65413347-65413366 MS.gene96248:intron 50.0%
GGGTCTGCCGAGATTCAATT+GGG - chr2.2:65412519-65412538 MS.gene96248:CDS 50.0%
GTGCAATTCAAAAGCCTGGG+GGG - chr2.2:65413421-65413440 MS.gene96248:intron 50.0%
GTGCAGAGTAGCAAGAAGGA+TGG - chr2.2:65414118-65414137 MS.gene96248:intron 50.0%
TATAAAGGACCGGAGGGAGT+AGG - chr2.2:65415358-65415377 MS.gene96248:intron 50.0%
TCTCGCCTTTCAGCTTCAAC+TGG + chr2.2:65414060-65414079 None:intergenic 50.0%
TCTGTTGCGGTGGATGTATG+TGG - chr2.2:65413968-65413987 MS.gene96248:intron 50.0%
TGACAACTAGAAGGGAACGG+AGG + chr2.2:65414775-65414794 None:intergenic 50.0%
TGGGTCTGCCGAGATTCAAT+TGG - chr2.2:65412518-65412537 MS.gene96248:CDS 50.0%
!! ATTTCCTGCGCTGGTTCTTC+TGG + chr2.2:65416122-65416141 None:intergenic 50.0%
AAGGCCTGAATGCTCGTTGG+GGG - chr2.2:65412978-65412997 MS.gene96248:intron 55.0%
AATTCAAAAGCCTGGGGGGC+AGG - chr2.2:65413425-65413444 MS.gene96248:intron 55.0%
AGAGAGAGAGAGAGAGGGAG+AGG + chr2.2:65413235-65413254 None:intergenic 55.0%
AGAGCTTCGAGTGGATGGTC+GGG - chr2.2:65412449-65412468 MS.gene96248:CDS 55.0%
ATTCAAAAGCCTGGGGGGCA+GGG - chr2.2:65413426-65413445 MS.gene96248:intron 55.0%
CAACGGCAGATTCTCCAGGA+CGG + chr2.2:65412671-65412690 None:intergenic 55.0%
CAGAAGGCCTGAATGCTCGT+TGG - chr2.2:65412975-65412994 MS.gene96248:intron 55.0%
CAGAGCTTCGAGTGGATGGT+CGG - chr2.2:65412448-65412467 MS.gene96248:CDS 55.0%
GAAGGCCTGAATGCTCGTTG+GGG - chr2.2:65412977-65412996 MS.gene96248:intron 55.0%
GAGAGAGAGAGAGAGGGAGA+GGG + chr2.2:65413234-65413253 None:intergenic 55.0%
GCGAATGGCCCAGACAAGTT+TGG + chr2.2:65412769-65412788 None:intergenic 55.0%
GCTGATCCTTCCTTTGAGCC+TGG - chr2.2:65412645-65412664 MS.gene96248:intron 55.0%
GTGGAACCACTGCCACGTTA+GGG - chr2.2:65413987-65414006 MS.gene96248:intron 55.0%
TAAGCCAGAAGAACCAGCGC+AGG - chr2.2:65416115-65416134 MS.gene96248:CDS 55.0%
TGGAACCACTGCCACGTTAG+GGG - chr2.2:65413988-65414007 MS.gene96248:intron 55.0%
TGTGGAACCACTGCCACGTT+AGG - chr2.2:65413986-65414005 MS.gene96248:intron 55.0%
TTATCGGTGGCCCCTCAAGT+TGG - chr2.2:65414155-65414174 MS.gene96248:CDS 55.0%
! TTTTCCCCCTAACGTGGCAG+TGG + chr2.2:65413996-65414015 None:intergenic 55.0%
AGAGAGAGAGAGGGAGAGGG+AGG + chr2.2:65413231-65413250 None:intergenic 60.0%
AGGCCTGAATGCTCGTTGGG+GGG - chr2.2:65412979-65412998 MS.gene96248:intron 60.0%
CTGAGGAAGCTGACCTCAGG+AGG + chr2.2:65413033-65413052 None:intergenic 60.0%
GAGAGAGAGAGGGAGAGGGA+GGG + chr2.2:65413230-65413249 None:intergenic 60.0%
GAGCTTCGAGTGGATGGTCG+GGG - chr2.2:65412450-65412469 MS.gene96248:CDS 60.0%
GGAACCACTGCCACGTTAGG+GGG - chr2.2:65413989-65414008 MS.gene96248:intron 60.0%
TCTCCCCCCAACGAGCATTC+AGG + chr2.2:65412985-65413004 None:intergenic 60.0%
TGAATGCTCGTTGGGGGGAG+AGG - chr2.2:65412984-65413003 MS.gene96248:intron 60.0%
!! GGTGGCCCCTCAAGTTGGTA+AGG - chr2.2:65414160-65414179 MS.gene96248:CDS 60.0%
AAGGTCCGGGGTTCGAACCC+CGG + chr2.2:65414975-65414994 None:intergenic 65.0%
GCAGATTCTCCAGGACGGCC+AGG + chr2.2:65412666-65412685 None:intergenic 65.0%
GGACGGCCAGGCTCAAAGGA+AGG + chr2.2:65412654-65412673 None:intergenic 65.0%
TCCAGGACGGCCAGGCTCAA+AGG + chr2.2:65412658-65412677 None:intergenic 65.0%
TCCTTTGAGCCTGGCCGTCC+TGG - chr2.2:65412654-65412673 MS.gene96248:intron 65.0%
TGAAAGACACCCTGCCCCCC+AGG + chr2.2:65413438-65413457 None:intergenic 65.0%
TGCTCGTTGGGGGGAGAGGA+TGG - chr2.2:65412988-65413007 MS.gene96248:intron 65.0%
AGTGGATGGTCGGGGCCCCT+TGG - chr2.2:65412458-65412477 MS.gene96248:CDS 70.0%
GGTGTCCGGGGTTCGAACCC+CGG - chr2.2:65414967-65414986 MS.gene96248:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 65412375 65416271 65412375 ID=MS.gene96248
chr2.2 mRNA 65412375 65416271 65412375 ID=MS.gene96248.t1;Parent=MS.gene96248
chr2.2 exon 65415829 65416271 65415829 ID=MS.gene96248.t1.exon1;Parent=MS.gene96248.t1
chr2.2 CDS 65415829 65416271 65415829 ID=cds.MS.gene96248.t1;Parent=MS.gene96248.t1
chr2.2 exon 65415608 65415722 65415608 ID=MS.gene96248.t1.exon2;Parent=MS.gene96248.t1
chr2.2 CDS 65415608 65415722 65415608 ID=cds.MS.gene96248.t1;Parent=MS.gene96248.t1
chr2.2 exon 65415436 65415516 65415436 ID=MS.gene96248.t1.exon3;Parent=MS.gene96248.t1
chr2.2 CDS 65415436 65415516 65415436 ID=cds.MS.gene96248.t1;Parent=MS.gene96248.t1
chr2.2 exon 65415116 65415304 65415116 ID=MS.gene96248.t1.exon4;Parent=MS.gene96248.t1
chr2.2 CDS 65415116 65415304 65415116 ID=cds.MS.gene96248.t1;Parent=MS.gene96248.t1
chr2.2 exon 65414470 65414732 65414470 ID=MS.gene96248.t1.exon5;Parent=MS.gene96248.t1
chr2.2 CDS 65414470 65414732 65414470 ID=cds.MS.gene96248.t1;Parent=MS.gene96248.t1
chr2.2 exon 65414137 65414195 65414137 ID=MS.gene96248.t1.exon6;Parent=MS.gene96248.t1
chr2.2 CDS 65414137 65414195 65414137 ID=cds.MS.gene96248.t1;Parent=MS.gene96248.t1
chr2.2 exon 65412375 65412574 65412375 ID=MS.gene96248.t1.exon7;Parent=MS.gene96248.t1
chr2.2 CDS 65412375 65412574 65412375 ID=cds.MS.gene96248.t1;Parent=MS.gene96248.t1
Gene Sequence

>MS.gene96248

ATGGAGCAGAGATTAGCTAATTGTTGGCGGTTGACAGTTAACGAAAAGAAATTCATTGAAACTGCTCTTCTATCAGAGCTTCGAGTGGATGGTCGGGGCCCCTTGGACTATCGCAAGTTGAACATTAAATTTGGGAGGGATGATGGGTCTGCCGAGATTCAATTGGGCGAGACACGTGTGATGAGTTTTGTGAGTGCTCAACTTGTGCAGCCTTACAAAGATAGGCCTAATGAAGGTACACTATCTATCTTCACTGAATTCTCTCCCATGGCTGATCCTTCCTTTGAGCCTGGCCGTCCTGGAGAATCTGCCGTTGAGTTAGGACGCATTATAGACCGCGGTTTACGGGAAAGTAGAGCCATTGACACTGAATCGCTCTGCATTCTTTCTGCCAAACTTGTCTGGGCCATTCGCATTGACATCCACATACTAGACAATGCAGGGTGAGAATCAGCTTTGCTTTTGTTCTCGTCCTCTTTCTTACCCAACTTGCTGATTTGTTTATCTACAACTAAGGCTAATTATTATTATGTTTTAATTTGTGAATAGAAATCTTGTTGATGCTGCAAATATTGCTGCATTGGCATCTCTGAAGACATTCAGAAGGCCTGAATGCTCGTTGGGGGGAGAGGATGGTCAACAAGTTGTAGTGCATCCTCCTGAGGTCAGCTTCCTCAGTTTAACAGCGTGACCTTTCGCCCCTGTTTTCTATTTAGCTTCCGCAGCAGTTATCGATAATATGATATGTATTGCAGGTGCGCGAGCCACTCCCTTTGATTATACATCATCTTCCAGTTGCAGTCACCTTTGGATTTTTCAGCAATGAAAATCTTGTGGTACAGATCTCTCTCTCCCTCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAATACATGCCTTTTTTGATTTTGGTATATATACGAGGTAATGGTCTTCTGATTTTATATGATGCTCTCTAGGTATTGGATCCGACATACCATGAAGAGGCTGTAATGACTGGACGCATGACTGCAACAGTTAATGCAAATGGTGATGTGTGTGCAATTCAAAAGCCTGGGGGGCAGGGTGTCTTTCAACGAGTTATCATGCATTGCTTGAAACTTGCTCATGTTAAAGCTGGTGATATTACAGCCAAGATAAATGATGCAGTGAGTTCTCTTTTTTATGCGTAAAGATTTGAGGCCCTCACTCTTTCAATGCCTATGAACAGAACGATGCATCTAGTTTATATCATCTCCCATTTTGTGTTTGGTGTTAAGCTCTGCTTGTACGAAATAATCAAACAAGTCTTCGTATCTTCTGCTTATAAGTCTTCTGGTTTGTTTAATTATAATTACAGTATAGTATGAGTTGCCTTCTGTTTGCCTTTCATTGCAGTGAAGTGTGCTTTAATAGCTTATTTCTTTTTTCTAGATGCCGTTATGAAAATTTTCATGCTTTTTGCGATCTGTCTCAATTGCATTATCAATTGCGTATGGATTATGGAATGTATATTGTTGGCTAATTTCTTTTGTTGTCTGAATGGATGTAGGTTGAAAAGCACAACAATGAAAGGGCACTACAGAAGATTAAACGACATTCTTCCTCTGTTGCGGTGGATGTATGTGGAACCACTGCCACGTTAGGGGGAAAACAAAATCAATCAGATGGTGATAAAGAAGGTAGTCATCTAGACCAGTTGAAGCTGAAAGGCGAGACAAATTTAATGGAATGTGATGCCACATCATTAGGACAAGTGCAGAGTAGCAAGAAGGATGGAAGCTCAAAGAATTTTATCGGTGGCCCCTCAAGTTGGTAAGGTGTCAGTTTGCCAAGAACTAATAACTTTTGATTTTTCTTTTTATTTTAAATTTTTGATAGTCTAGCTGTTTCTGGTCCCTCAAAGACTGTTATTTATAGTCAATGGATTGATAATATGGAAACCTATATGGCATAAACGTGTCAATAAAGTAACAATCATATTAAGTCAACTGCTGAAATTTATAATTACTTTTATCTGTCATTTTGGTTCTTCCATTCTGAGTTTTGTCTATGTTGAGGTAAAAATACTTGGTCTTTCACTTCTCAGGGATCCCTACTCAGATTGTGTCAATTCAGATCTTCTAAAAGCTTCTCTAGCTTCTCGTGGTAATTGCTTCTCCTTCACTTTCACTATAATCTTGGCTATTATATTGATTTTGATTAAGCATTTAAACTGGTCACTCTATTTAGCTGCACTTAGGAATATTTCCAAAATTCCAAAAATTGAAATCATTGCAGTACTAAGGCCTCTCATTTGTTTAGATAAAATTGTTCAATTGGATGTTTTAGAATTATTTGCCACCCATCCTGTTTAGAAGACATTCACATACACAAACAAAACTCTCAAGTCCCATGTAAAACAATACTCCCTCCGTTCCCTTCTAGTTGTCATTTTAAGACTTTTTACACATACTAAGATGATCAGGAATTTTTTTAGACTACTTTTCTTTTTCCTATAGTACCTTTACTCATTTATTATCCCATTCCATCAATTCTCTCTGTAATAACTATCCCATTCCATCAATTCTCTCTGTAATAACTAACTAAGGGTAATTTTTTTGGTGGTGTCCGGGGTTCGAACCCCGGACCTTGCATATATTATGCATTGTCCTTACCAACTGAGTTAAGCTCTTGGAGACAACTAAGGGTAATTTAACAAAACAATAAGGGTTAATGGTGCTTTACCCCCCCTATAATATACTCCCTCCGGTCCTATTTATAAGAAAATTTTCAAAAATTTTTTTGGTCCTATTTATAAGAAAGAGTCACAACTTTTAAGATACATTCATTGCGTAAAAGACTTTTCTAACCCTCATTTAATGTTGGTCTTTTCAATATTGGTGGGTATAGTATTTAATACTTCACAAATTTTGATGAGGGTATATTTGTAAAAACAAAAAATTGCAACAACTAATGATTGTCTTGGTTTTGATGATTTTTGGTTTCTTTTCTTATATAAAGGACCGGAGGGAGTAGGTCATTGACTCATTTCCGGTTTCCCCTGTAGATTATTATTTTTTATTTACCCCCTGTAAATTTTTTTTGTTTTGGAATACCCCCTAATAGGTCATTCAAAAATAAAATTTCTGCAAAAAAAAAAAAGTTGGTTTTTGAATGACCTATTAGGGGGTATTCCAAAACAATTTTTTTTTACAGGGGAAATAAAAAAAAAAAATTACAGAGGGGAAACCGGAAATGACCTATATTACAGAGGGTAAAACACTATTAACCCAAACAATAATTAATGTTGCATTGAACTTTGAAAATGATAAGTAACTCGTAAATTGAAACAATTTTTTTTTTAAATTCAAATGCGACAACGAAAAAGGAACAAAGGGAGTAATGTAGAGGATGAGATGTCAATCAACCATTACTTTTCACAGCCATACATAAATCTCAACCTGATTCATTATTCTACAAGGAGTGTGTGAGGTTTTCGTTTAGATAGGATGCAACTGTTATCTTGTTGATTTCATTTCTGCGTTTGGTTGGACTTCTTTTTTAGATTTCAGTATTTCATTATAATTTTTTAATAACAGATTGCTTCATATATTTTATAATCATTGGTGTATGTATCGATTCATATAGTTTATACACAAATTGATGTAGTGTAATGAGAAGATAGAAATACAAAATTTCATTGATTTGTACCATTGTAAAATGAGCAGGACAATCAACTCCTAGTAAACAAAAGGATTCAAGACAGGAGACTAAGCCAGAAGAACCAGCGCAGGAAATCAAGACAGTTTCTGCACCAATTGACACTGCTCTAACTGCTGGGCAGAGTAATGAAGGTAAGACTCTGAAGGATGCTGTCAAGCCCAAGAACAAGAGGAAGAAAAAAACATCTTCCAATAATGGGAATTAA
Protein sequence

>MS.gene96248.t1

MEQRLANCWRLTVNEKKFIETALLSELRVDGRGPLDYRKLNIKFGRDDGSAEIQLGETRVMSFVSAQLVQPYKDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRAIDTESLCILSAKLVWAIRIDIHILDNAGNLVDAANIAALASLKTFRRPECSLGGEDGQQVVVHPPEVREPLPLIIHHLPVAVTFGFFSNENLVVLDPTYHEEAVMTGRMTATVNANGDVCAIQKPGGQGVFQRVIMHCLKLAHVKAGDITAKINDAVEKHNNERALQKIKRHSSSVAVDVCGTTATLGGKQNQSDGDKEGSHLDQLKLKGETNLMECDATSLGQVQSSKKDGSSKNFIGGPSSWDPYSDCVNSDLLKASLASRGQSTPSKQKDSRQETKPEEPAQEIKTVSAPIDTALTAGQSNEGKTLKDAVKPKNKRKKKTSSNNGN