Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96328.t1 | XP_003610026.1 | 97.8 | 625 | 14 | 0 | 1 | 625 | 1 | 625 | 9.70E-292 | 1012.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96328.t1 | Q9LU77 | 69.0 | 649 | 175 | 11 | 1 | 625 | 1 | 647 | 1.5e-216 | 753.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96328.t1 | Q84YG8 | 97.8 | 625 | 14 | 0 | 1 | 625 | 1 | 625 | 7.0e-292 | 1012.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050369 | MS.gene96328 | 0.810587 | 1.07E-50 | -1.69E-46 |
| MS.gene054742 | MS.gene96328 | 0.814256 | 1.69E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene96328 | MS.gene026690 | PPI |
| MS.gene96328 | MS.gene32322 | PPI |
| MS.gene96328 | MS.gene31845 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96328.t1 | MTR_4g127100 | 98.560 | 625 | 9 | 0 | 1 | 625 | 1 | 625 | 0.0 | 1271 |
| MS.gene96328.t1 | MTR_4g127100 | 98.295 | 528 | 9 | 0 | 1 | 528 | 1 | 528 | 0.0 | 1075 |
| MS.gene96328.t1 | MTR_4g127090 | 73.693 | 631 | 96 | 7 | 1 | 625 | 1 | 567 | 0.0 | 905 |
| MS.gene96328.t1 | MTR_4g084870 | 57.226 | 685 | 207 | 15 | 1 | 625 | 1 | 659 | 0.0 | 722 |
| MS.gene96328.t1 | MTR_6g069510 | 59.105 | 648 | 198 | 12 | 1 | 625 | 1 | 604 | 0.0 | 718 |
| MS.gene96328.t1 | MTR_7g089360 | 60.443 | 632 | 202 | 11 | 1 | 625 | 1 | 591 | 0.0 | 696 |
| MS.gene96328.t1 | MTR_1g030890 | 58.168 | 655 | 210 | 12 | 1 | 625 | 1 | 621 | 0.0 | 692 |
| MS.gene96328.t1 | MTR_7g089360 | 59.194 | 620 | 205 | 11 | 1 | 613 | 1 | 579 | 0.0 | 662 |
| MS.gene96328.t1 | MTR_8g107360 | 57.166 | 628 | 162 | 14 | 1 | 625 | 1 | 524 | 0.0 | 652 |
| MS.gene96328.t1 | MTR_1g030890 | 53.777 | 556 | 193 | 12 | 1 | 526 | 1 | 522 | 5.62e-179 | 518 |
| MS.gene96328.t1 | MTR_1g029190 | 48.177 | 631 | 217 | 20 | 1 | 625 | 1 | 527 | 3.70e-167 | 488 |
| MS.gene96328.t1 | MTR_2g038470 | 41.158 | 639 | 228 | 11 | 1 | 623 | 1 | 507 | 1.08e-149 | 442 |
| MS.gene96328.t1 | MTR_7g009370 | 52.709 | 203 | 86 | 2 | 423 | 625 | 165 | 357 | 4.64e-59 | 202 |
| MS.gene96328.t1 | MTR_7g009370 | 54.658 | 161 | 68 | 2 | 1 | 159 | 1 | 158 | 4.82e-48 | 172 |
| MS.gene96328.t1 | MTR_6g011400 | 52.151 | 186 | 89 | 0 | 440 | 625 | 176 | 361 | 6.36e-59 | 202 |
| MS.gene96328.t1 | MTR_6g011400 | 55.696 | 158 | 70 | 0 | 1 | 158 | 1 | 158 | 5.67e-50 | 177 |
| MS.gene96328.t1 | MTR_7g079720 | 45.918 | 196 | 94 | 2 | 435 | 623 | 169 | 359 | 8.83e-53 | 185 |
| MS.gene96328.t1 | MTR_7g079720 | 49.359 | 156 | 78 | 1 | 1 | 156 | 1 | 155 | 1.42e-47 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96328.t1 | AT5G57090 | 74.730 | 649 | 138 | 11 | 1 | 625 | 1 | 647 | 0.0 | 936 |
| MS.gene96328.t1 | AT5G57090 | 72.578 | 547 | 125 | 10 | 103 | 625 | 2 | 547 | 0.0 | 751 |
| MS.gene96328.t1 | AT1G70940 | 58.234 | 668 | 208 | 14 | 1 | 625 | 1 | 640 | 0.0 | 706 |
| MS.gene96328.t1 | AT1G23080 | 59.288 | 646 | 211 | 12 | 1 | 625 | 1 | 615 | 0.0 | 703 |
| MS.gene96328.t1 | AT1G23080 | 59.288 | 646 | 211 | 12 | 1 | 625 | 1 | 615 | 0.0 | 703 |
| MS.gene96328.t1 | AT2G01420 | 57.935 | 649 | 216 | 12 | 1 | 625 | 1 | 616 | 0.0 | 702 |
| MS.gene96328.t1 | AT2G01420 | 58.642 | 648 | 209 | 13 | 1 | 625 | 1 | 612 | 0.0 | 701 |
| MS.gene96328.t1 | AT1G23080 | 58.769 | 650 | 212 | 12 | 1 | 625 | 1 | 619 | 0.0 | 699 |
| MS.gene96328.t1 | AT1G73590 | 59.105 | 648 | 216 | 14 | 1 | 625 | 1 | 622 | 0.0 | 686 |
| MS.gene96328.t1 | AT1G23080 | 55.393 | 547 | 192 | 12 | 1 | 526 | 1 | 516 | 0.0 | 548 |
| MS.gene96328.t1 | AT2G01420 | 54.364 | 550 | 194 | 12 | 1 | 526 | 1 | 517 | 0.0 | 538 |
| MS.gene96328.t1 | AT1G77110 | 45.807 | 644 | 256 | 14 | 1 | 625 | 1 | 570 | 4.31e-172 | 502 |
| MS.gene96328.t1 | AT1G77110 | 44.817 | 627 | 243 | 15 | 1 | 603 | 1 | 548 | 3.62e-159 | 468 |
| MS.gene96328.t1 | AT5G15100 | 59.877 | 162 | 65 | 0 | 462 | 623 | 204 | 365 | 1.21e-58 | 201 |
| MS.gene96328.t1 | AT5G15100 | 47.458 | 177 | 84 | 2 | 1 | 173 | 1 | 172 | 3.53e-43 | 159 |
| MS.gene96328.t1 | AT5G16530 | 53.595 | 153 | 71 | 0 | 471 | 623 | 195 | 347 | 5.45e-52 | 183 |
| MS.gene96328.t1 | AT5G16530 | 44.878 | 205 | 100 | 3 | 1 | 205 | 1 | 192 | 4.09e-50 | 177 |
| MS.gene96328.t1 | AT5G16530 | 44.878 | 205 | 100 | 3 | 1 | 205 | 1 | 192 | 1.29e-50 | 178 |
| MS.gene96328.t1 | AT5G16530 | 52.985 | 134 | 63 | 0 | 471 | 604 | 195 | 328 | 6.95e-44 | 160 |
Find 141 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCAAATCCTATGCTTTC+TGG | 0.083914 | 8.4:-7746792 | MS.gene96328:CDS |
| AAAGCTGCTTCTACTGATTT+TGG | 0.151528 | 8.4:-7746627 | MS.gene96328:CDS |
| GTGGCGTCATATTATTTAAA+TGG | 0.167054 | 8.4:+7747120 | None:intergenic |
| TCTGACGTTGTTTCGCTTAA+TGG | 0.202697 | 8.4:-7747251 | MS.gene96328:CDS |
| GTTATAGAAGCTGCAGTTTC+AGG | 0.222137 | 8.4:+7747290 | None:intergenic |
| GAAATGCCATCTATTGTAAA+AGG | 0.235112 | 8.4:-7745828 | MS.gene96328:CDS |
| TTTGGTCTCTTGTATCATTT+AGG | 0.244094 | 8.4:-7746110 | MS.gene96328:intron |
| ATAAGACTTGAGTAGGTATT+AGG | 0.244249 | 8.4:+7746141 | None:intergenic |
| CACCCAGTACTGAGTATATT+TGG | 0.250618 | 8.4:+7745352 | None:intergenic |
| AATACCTACTCAAGTCTTAT+AGG | 0.254018 | 8.4:-7746138 | MS.gene96328:CDS |
| TTAAGATTCCCTTCGGAAAT+AGG | 0.258413 | 8.4:+7746663 | None:intergenic |
| TTGTGTTGCAGGGTTATATT+TGG | 0.267057 | 8.4:-7745225 | MS.gene96328:intron |
| CTTCCAAGTCCATCTTCTTC+TGG | 0.279820 | 8.4:+7746259 | None:intergenic |
| ATGTGCAACTCCTTGTTATT+AGG | 0.280094 | 8.4:+7746711 | None:intergenic |
| CTATTTGTGTAACCATGTTT+TGG | 0.283244 | 8.4:+7746975 | None:intergenic |
| TTGTTCTGCAAAGTGTTATT+TGG | 0.283570 | 8.4:-7747376 | MS.gene96328:CDS |
| CTTCAAACTGATGCTGAAAT+AGG | 0.286348 | 8.4:-7747218 | MS.gene96328:CDS |
| TCTTCCTAACACACTTGTTA+TGG | 0.291487 | 8.4:-7747459 | MS.gene96328:CDS |
| GATCATTGGAAGATATAAAA+TGG | 0.291739 | 8.4:+7747621 | None:intergenic |
| ATCTTCTTCTGGCTAATATA+TGG | 0.325305 | 8.4:+7746270 | None:intergenic |
| ATACTCTACTATGTGCTTCT+TGG | 0.327447 | 8.4:-7745177 | MS.gene96328:CDS |
| CTTACATGTTGCAATTGTTC+AGG | 0.334263 | 8.4:-7745536 | MS.gene96328:intron |
| TGGATGGAGATTGTATTCTT+TGG | 0.334269 | 8.4:+7745372 | None:intergenic |
| CTTCCTAACACACTTGTTAT+GGG | 0.344721 | 8.4:-7747458 | MS.gene96328:CDS |
| CACATAGTAGAGTATTGTTA+TGG | 0.345910 | 8.4:+7745185 | None:intergenic |
| TGAATATGCAGGTCTGTTCA+TGG | 0.369728 | 8.4:-7745683 | MS.gene96328:intron |
| GAACCAGAAAGCATAGGATT+TGG | 0.370922 | 8.4:+7746789 | None:intergenic |
| AAGATCAACTACTAACTCTA+TGG | 0.372841 | 8.4:-7747165 | MS.gene96328:CDS |
| GACTCATCCTTATCATGGTT+TGG | 0.377147 | 8.4:-7746182 | MS.gene96328:CDS |
| GATAGCATGGGTGGTGGAAA+TGG | 0.382932 | 8.4:-7746741 | MS.gene96328:CDS |
| CAAGTCTTATAGGACTTGTT+TGG | 0.388260 | 8.4:-7746128 | MS.gene96328:CDS |
| AGGAGTTGCACATGTTTGTT+TGG | 0.388483 | 8.4:-7746701 | MS.gene96328:CDS |
| ACTACTAACTCTATGGTATC+TGG | 0.400134 | 8.4:-7747158 | MS.gene96328:CDS |
| TGGCGTCATATTATTTAAAT+GGG | 0.400508 | 8.4:+7747121 | None:intergenic |
| AGATGGACTTGGAAGGAGGA+GGG | 0.406669 | 8.4:-7746251 | MS.gene96328:CDS |
| TTCACACCAGATCAATGTTC+TGG | 0.419637 | 8.4:-7747689 | MS.gene96328:CDS |
| ATTCCCATAACAAGTGTGTT+AGG | 0.421389 | 8.4:+7747455 | None:intergenic |
| ATTCATAGCATAAGGATCAT+TGG | 0.433457 | 8.4:+7747607 | None:intergenic |
| TGCATAAGAAGAGGGGAGGG+AGG | 0.434830 | 8.4:-7746857 | MS.gene96328:CDS |
| CATCCAAATATACTCAGTAC+TGG | 0.436602 | 8.4:-7745355 | MS.gene96328:CDS |
| ATACTGTCTGATGCTGGTCT+TGG | 0.436774 | 8.4:-7745795 | MS.gene96328:CDS |
| AGTCTTGTCATAACACTTGC+TGG | 0.442208 | 8.4:+7746201 | None:intergenic |
| CACAAAGGGAACAATACCTT+GGG | 0.446341 | 8.4:+7745399 | None:intergenic |
| GACAAGACTCATCCTTATCA+TGG | 0.446845 | 8.4:-7746187 | MS.gene96328:CDS |
| TGTGTTAGGAAGAGTTGAAA+GGG | 0.446908 | 8.4:+7747469 | None:intergenic |
| AAAACCAAGATAGTCTTGAT+TGG | 0.448110 | 8.4:-7747508 | MS.gene96328:CDS |
| AGTCCTCGGAGTAGCCCCTT+TGG | 0.453442 | 8.4:+7746908 | None:intergenic |
| AAACTAGATCCTCTTGGAGT+TGG | 0.454124 | 8.4:+7747044 | None:intergenic |
| CTATCTATAACCATGATTAC+CGG | 0.459673 | 8.4:-7747800 | None:intergenic |
| AAGATGGACTTGGAAGGAGG+AGG | 0.460717 | 8.4:-7746252 | MS.gene96328:CDS |
| ACGCATACCAATTGCTATTG+AGG | 0.461284 | 8.4:+7745567 | None:intergenic |
| GTGAATCAGCTGCTAAGAAA+TGG | 0.462800 | 8.4:+7747582 | None:intergenic |
| CTTTCTGGTTCTACAAGTGC+TGG | 0.462832 | 8.4:-7746777 | MS.gene96328:CDS |
| AAATGGTAATTCATAGCATA+AGG | 0.463466 | 8.4:+7747599 | None:intergenic |
| TTTCCACATGCAATCAGCTT+AGG | 0.466851 | 8.4:+7745652 | None:intergenic |
| AGTGGTGAGTTGTTCAATAA+TGG | 0.467127 | 8.4:-7746828 | MS.gene96328:CDS |
| CGGCGCTTTACTTTGAAACA+TGG | 0.467403 | 8.4:+7747001 | None:intergenic |
| TGCATGTTTAAGATTCCCTT+CGG | 0.467611 | 8.4:+7746656 | None:intergenic |
| ATTCTATGCAATCTTCCAAA+GGG | 0.470349 | 8.4:-7746923 | MS.gene96328:CDS |
| TAGTCCAATCAAGACTATCT+TGG | 0.470572 | 8.4:+7747504 | None:intergenic |
| ATCTCAATACTGTCTGATGC+TGG | 0.484824 | 8.4:-7745801 | MS.gene96328:CDS |
| GATGGACTTGGAAGGAGGAG+GGG | 0.487071 | 8.4:-7746250 | MS.gene96328:CDS |
| GCGGCAACCTCAATAGCAAT+TGG | 0.493077 | 8.4:-7745574 | MS.gene96328:CDS |
| TCTTCGAAATTTGAAGTCCT+CGG | 0.493160 | 8.4:+7746894 | None:intergenic |
| ACATAGTAGAGTATTGTTAT+GGG | 0.493323 | 8.4:+7745186 | None:intergenic |
| ATTTCAACATCCCTTTGTCT+AGG | 0.495176 | 8.4:+7746312 | None:intergenic |
| GAGGTTGCCGCAATCACAGC+TGG | 0.497964 | 8.4:+7745586 | None:intergenic |
| ACAAAGGGATGTTGAAATTG+AGG | 0.498259 | 8.4:-7746307 | MS.gene96328:CDS |
| TTTATACCAGAACATTGATC+TGG | 0.498746 | 8.4:+7747683 | None:intergenic |
| GTGTGTTAGGAAGAGTTGAA+AGG | 0.500046 | 8.4:+7747468 | None:intergenic |
| TGCCGCAATCACAGCTGGAC+CGG | 0.500587 | 8.4:+7745591 | None:intergenic |
| TATTCTTTGGCAAACACAAA+GGG | 0.501329 | 8.4:+7745385 | None:intergenic |
| CCAGAAAGCATAGGATTTGG+AGG | 0.501646 | 8.4:+7746792 | None:intergenic |
| TGGTTAAAACTAGATCCTCT+TGG | 0.501747 | 8.4:+7747038 | None:intergenic |
| CATACGGTTCAGTTCGTTGG+TGG | 0.502544 | 8.4:-7747718 | MS.gene96328:CDS |
| GAAAATACCGTTGCATCAAA+AGG | 0.506036 | 8.4:-7746573 | MS.gene96328:intron |
| ATATATTAGCCAGAAGAAGA+TGG | 0.507802 | 8.4:-7746268 | MS.gene96328:CDS |
| TATATCCTTACCGGTAATCA+TGG | 0.512246 | 8.4:+7747790 | None:intergenic |
| CCACGAGCTTCAAATCTAAC+CGG | 0.512403 | 8.4:-7747101 | MS.gene96328:CDS |
| TAGCATACGGTTCAGTTCGT+TGG | 0.514377 | 8.4:-7747721 | MS.gene96328:CDS |
| GGATGCATAAGAAGAGGGGA+GGG | 0.515503 | 8.4:-7746860 | MS.gene96328:CDS |
| CACAAAGAAGAAAGATAGCA+TGG | 0.528645 | 8.4:-7746754 | MS.gene96328:CDS |
| GTCTGATGCTGGTCTTGGAA+TGG | 0.532632 | 8.4:-7745790 | MS.gene96328:CDS |
| TATTCTATGCAATCTTCCAA+AGG | 0.533077 | 8.4:-7746924 | MS.gene96328:CDS |
| TAGCCAGAAGAAGATGGACT+TGG | 0.535792 | 8.4:-7746262 | MS.gene96328:CDS |
| ATGGGTGGTGGAAATGGTAA+TGG | 0.538764 | 8.4:-7746735 | MS.gene96328:CDS |
| AGGATGCATAAGAAGAGGGG+AGG | 0.538999 | 8.4:-7746861 | MS.gene96328:CDS |
| AACATCGTATATATCCTTAC+CGG | 0.540847 | 8.4:+7747781 | None:intergenic |
| GCTATGTATGGTGATTTCTC+AGG | 0.545619 | 8.4:-7747419 | MS.gene96328:CDS |
| AGGGGAGGGAGGAGTATGAG+TGG | 0.545646 | 8.4:-7746846 | MS.gene96328:CDS |
| TCATGTGGAACATATTTGGA+AGG | 0.549434 | 8.4:+7746594 | None:intergenic |
| TATAACCATGATTACCGGTA+AGG | 0.552385 | 8.4:-7747795 | None:intergenic |
| AAGAAAGATAGCATGGGTGG+TGG | 0.552901 | 8.4:-7746747 | MS.gene96328:CDS |
| GAACATGAGTCCTAGACAAA+GGG | 0.557185 | 8.4:-7746322 | MS.gene96328:CDS |
| ACACAAAGGGAACAATACCT+TGG | 0.558237 | 8.4:+7745398 | None:intergenic |
| ATTTCAGCATCAGTTTGAAG+TGG | 0.563565 | 8.4:+7747221 | None:intergenic |
| ATTGAGGATGCATAAGAAGA+GGG | 0.564904 | 8.4:-7746865 | MS.gene96328:CDS |
| AGTGCTTCACCTATTTCCGA+AGG | 0.569824 | 8.4:-7746672 | MS.gene96328:CDS |
| GACCGGTCCAGCTGTGATTG+CGG | 0.570068 | 8.4:-7745593 | MS.gene96328:CDS |
| ATAAAATGGAAAGATAGTAA+TGG | 0.571283 | 8.4:+7747635 | None:intergenic |
| GGAATGGCCATGTTCAGTCT+AGG | 0.576547 | 8.4:-7745774 | MS.gene96328:intron |
| AAGTCCTATAAGACTTGAGT+AGG | 0.579378 | 8.4:+7746134 | None:intergenic |
| ATGGCTGTAAGGTTCTTGAC+CGG | 0.579568 | 8.4:-7745610 | MS.gene96328:CDS |
| GAAAGCATAGGATTTGGAGG+AGG | 0.582023 | 8.4:+7746795 | None:intergenic |
| ATTTCGAAGATGAGACATTG+AGG | 0.583231 | 8.4:-7746881 | MS.gene96328:CDS |
| AGCATCAGACAGTATTGAGA+TGG | 0.585685 | 8.4:+7745803 | None:intergenic |
| CATACATAGCTCTTAAAAGA+GGG | 0.587601 | 8.4:+7747432 | None:intergenic |
| GTATTCTTTGGCAAACACAA+AGG | 0.589188 | 8.4:+7745384 | None:intergenic |
| CCATACATAGCTCTTAAAAG+AGG | 0.589751 | 8.4:+7747431 | None:intergenic |
| GTTGCTATGATATTAGCATA+CGG | 0.591499 | 8.4:-7747734 | MS.gene96328:CDS |
| TCAATAGCAATTGGTATGCG+TGG | 0.591915 | 8.4:-7745565 | MS.gene96328:CDS |
| CATTGAGGATGCATAAGAAG+AGG | 0.595513 | 8.4:-7746866 | MS.gene96328:CDS |
| ATCCAAATATACTCAGTACT+GGG | 0.597499 | 8.4:-7745354 | MS.gene96328:intron |
| CAGTACTGAGTATATTTGGA+TGG | 0.598102 | 8.4:+7745356 | None:intergenic |
| CAGCCTAAGCTGATTGCATG+TGG | 0.600231 | 8.4:-7745655 | MS.gene96328:CDS |
| CCGGTTAGATTTGAAGCTCG+TGG | 0.602636 | 8.4:+7747101 | None:intergenic |
| AAAGCATAGGATTTGGAGGA+GGG | 0.604256 | 8.4:+7746796 | None:intergenic |
| AGAACATGAGTCCTAGACAA+AGG | 0.609263 | 8.4:-7746323 | MS.gene96328:CDS |
| CAGAAGAAGATGGACTTGGA+AGG | 0.618184 | 8.4:-7746258 | MS.gene96328:CDS |
| AAGAAGATGGACTTGGAAGG+AGG | 0.619267 | 8.4:-7746255 | MS.gene96328:CDS |
| TTGCAGGCTGCACTTCCCCA+AGG | 0.623512 | 8.4:-7745415 | MS.gene96328:intron |
| TGATTTCTCAGGAAATCTCA+TGG | 0.626161 | 8.4:-7747408 | MS.gene96328:CDS |
| CTTGTAGAACCAGAAAGCAT+AGG | 0.628500 | 8.4:+7746783 | None:intergenic |
| GATGCTGAAATAGGTGAGGA+TGG | 0.629252 | 8.4:-7747209 | MS.gene96328:CDS |
| ACAAGTACCTAGACTGAACA+TGG | 0.632685 | 8.4:+7745767 | None:intergenic |
| GGTGAGTTGTTCAATAATGG+TGG | 0.635458 | 8.4:-7746825 | MS.gene96328:CDS |
| TCAAGAGAACCAACTCCAAG+AGG | 0.636626 | 8.4:-7747053 | MS.gene96328:CDS |
| TTCTATGCAATCTTCCAAAG+GGG | 0.639413 | 8.4:-7746922 | MS.gene96328:CDS |
| GGATGGTAAACTTCATGTTG+TGG | 0.641471 | 8.4:-7747192 | MS.gene96328:CDS |
| GTGCTTCACCTATTTCCGAA+GGG | 0.647728 | 8.4:-7746671 | MS.gene96328:CDS |
| AACTGATGCTGAAATAGGTG+AGG | 0.662294 | 8.4:-7747213 | MS.gene96328:CDS |
| AAGAAGAAAGATAGCATGGG+TGG | 0.662615 | 8.4:-7746750 | MS.gene96328:CDS |
| TGGTAATGGACCTAATAACA+AGG | 0.666402 | 8.4:-7746721 | MS.gene96328:CDS |
| ACAAAGAAGAAAGATAGCAT+GGG | 0.672441 | 8.4:-7746753 | MS.gene96328:CDS |
| TTGAGGATGCATAAGAAGAG+GGG | 0.674550 | 8.4:-7746864 | MS.gene96328:CDS |
| CTTCCAAAGGGGCTACTCCG+AGG | 0.679174 | 8.4:-7746911 | MS.gene96328:CDS |
| AAAGCGCCGAGTCCAAAACA+TGG | 0.682082 | 8.4:-7746987 | MS.gene96328:CDS |
| AACAGAATATATCTCAACAC+CGG | 0.682527 | 8.4:+7747082 | None:intergenic |
| AATATCATAGCAACATACAG+TGG | 0.685927 | 8.4:+7747743 | None:intergenic |
| CTTGTCATAACACTTGCTGG+AGG | 0.701230 | 8.4:+7746204 | None:intergenic |
| ACAAAGGGAACAATACCTTG+GGG | 0.771870 | 8.4:+7745400 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGCTTATATTTAAAAAA+CGG | + | chr8.4:7746935-7746954 | None:intergenic | 10.0% |
| !! | TGAAATACTAAAAAAGAATT+TGG | - | chr8.4:7747707-7747726 | MS.gene96328:CDS | 15.0% |
| !!! | AATGTTTAATTTTAATTTGC+AGG | - | chr8.4:7747527-7747546 | MS.gene96328:CDS | 15.0% |
| !!! | ATTTTGCTTATATTTAGAAA+CGG | - | chr8.4:7747043-7747062 | MS.gene96328:CDS | 15.0% |
| !!! | TAATAGATTGAAGATTTTTT+TGG | + | chr8.4:7746898-7746917 | None:intergenic | 15.0% |
| !!! | TGAAAGTTGATATATTTATA+GGG | + | chr8.4:7746503-7746522 | None:intergenic | 15.0% |
| !!! | TTGAAAGTTGATATATTTAT+AGG | + | chr8.4:7746504-7746523 | None:intergenic | 15.0% |
| !! | AATAAGCAACTAATTAGAAT+AGG | + | chr8.4:7747499-7747518 | None:intergenic | 20.0% |
| !! | ATAAAATGGAAAGATAGTAA+TGG | + | chr8.4:7745326-7745345 | None:intergenic | 20.0% |
| !! | ATAAGCAACTAATTAGAATA+GGG | + | chr8.4:7747498-7747517 | None:intergenic | 20.0% |
| !! | CATTCATTTAATGATGTATT+TGG | - | chr8.4:7746970-7746989 | MS.gene96328:CDS | 20.0% |
| !!! | AATTAAGCCAAAATTTTCTT+AGG | + | chr8.4:7747237-7747256 | None:intergenic | 20.0% |
| !!! | ACAAATAGTTTTCAAAGTAA+TGG | - | chr8.4:7745998-7746017 | MS.gene96328:intron | 20.0% |
| !!! | ATAATCATTTTTGAATATGC+AGG | - | chr8.4:7747264-7747283 | MS.gene96328:CDS | 20.0% |
| !!! | ATATTCTCCTAAGAAAATTT+TGG | - | chr8.4:7747227-7747246 | MS.gene96328:CDS | 20.0% |
| ! | AAATGGTAATTCATAGCATA+AGG | + | chr8.4:7745362-7745381 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr8.4:7747009-7747028 | None:intergenic | 25.0% |
| ! | GATCATTGGAAGATATAAAA+TGG | + | chr8.4:7745340-7745359 | None:intergenic | 25.0% |
| ! | TAAGCAACTAATTAGAATAG+GGG | + | chr8.4:7747497-7747516 | None:intergenic | 25.0% |
| ! | TGCTTATATTTAAAAAACGG+AGG | + | chr8.4:7746932-7746951 | None:intergenic | 25.0% |
| ! | TGGCGTCATATTATTTAAAT+GGG | + | chr8.4:7745840-7745859 | None:intergenic | 25.0% |
| ! | TTCTTAGGAGAATATAATGT+TGG | + | chr8.4:7747222-7747241 | None:intergenic | 25.0% |
| !! | ACATGGCATAAAAATCATTT+TGG | + | chr8.4:7745943-7745962 | None:intergenic | 25.0% |
| !! | AGTTTTCAAAGTAATGGTAA+TGG | - | chr8.4:7746004-7746023 | MS.gene96328:intron | 25.0% |
| !! | ATTTTCATGTGGAACATATT+TGG | + | chr8.4:7746371-7746390 | None:intergenic | 25.0% |
| !! | TTTAATACCTTTTGATGCAA+CGG | + | chr8.4:7746395-7746414 | None:intergenic | 25.0% |
| !!! | ACATAGTAGAGTATTGTTAT+GGG | + | chr8.4:7747775-7747794 | None:intergenic | 25.0% |
| !!! | TTGAAGATTTTTTTGGAGAT+TGG | + | chr8.4:7746891-7746910 | None:intergenic | 25.0% |
| AACAGAATATATCTCAACAC+CGG | + | chr8.4:7745879-7745898 | None:intergenic | 30.0% | |
| AACATCGTATATATCCTTAC+CGG | + | chr8.4:7745180-7745199 | None:intergenic | 30.0% | |
| AAGATCAACTACTAACTCTA+TGG | - | chr8.4:7745793-7745812 | MS.gene96328:CDS | 30.0% | |
| AATATCATAGCAACATACAG+TGG | + | chr8.4:7745218-7745237 | None:intergenic | 30.0% | |
| AATTTGGTATTTGTGTTGCA+GGG | - | chr8.4:7747723-7747742 | MS.gene96328:CDS | 30.0% | |
| ACAAAGAAGAAAGATAGCAT+GGG | - | chr8.4:7746205-7746224 | MS.gene96328:CDS | 30.0% | |
| ATAAGACTTGAGTAGGTATT+AGG | + | chr8.4:7746820-7746839 | None:intergenic | 30.0% | |
| ATATATTAGCCAGAAGAAGA+TGG | - | chr8.4:7746690-7746709 | MS.gene96328:CDS | 30.0% | |
| ATCCAAATATACTCAGTACT+GGG | - | chr8.4:7747604-7747623 | MS.gene96328:CDS | 30.0% | |
| ATTCATAGCATAAGGATCAT+TGG | + | chr8.4:7745354-7745373 | None:intergenic | 30.0% | |
| ATTCTATGCAATCTTCCAAA+GGG | - | chr8.4:7746035-7746054 | MS.gene96328:intron | 30.0% | |
| ATTGCAAGTGATTAAGTATG+TGG | - | chr8.4:7747678-7747697 | MS.gene96328:CDS | 30.0% | |
| CATACATAGCTCTTAAAAGA+GGG | + | chr8.4:7745529-7745548 | None:intergenic | 30.0% | |
| CTTCAAAAAGTAGTTATCCT+TGG | - | chr8.4:7745398-7745417 | MS.gene96328:CDS | 30.0% | |
| GAAATGCCATCTATTGTAAA+AGG | - | chr8.4:7747130-7747149 | MS.gene96328:CDS | 30.0% | |
| GTGGCGTCATATTATTTAAA+TGG | + | chr8.4:7745841-7745860 | None:intergenic | 30.0% | |
| GTTGCTATGATATTAGCATA+CGG | - | chr8.4:7745224-7745243 | MS.gene96328:intron | 30.0% | |
| TATTCTATGCAATCTTCCAA+AGG | - | chr8.4:7746034-7746053 | MS.gene96328:intron | 30.0% | |
| TATTCTTTGGCAAACACAAA+GGG | + | chr8.4:7747576-7747595 | None:intergenic | 30.0% | |
| TGCTTATATTTAGAAACGGA+GGG | - | chr8.4:7747047-7747066 | MS.gene96328:CDS | 30.0% | |
| TTGCTTATATTTAGAAACGG+AGG | - | chr8.4:7747046-7747065 | MS.gene96328:CDS | 30.0% | |
| TTTATACCAGAACATTGATC+TGG | + | chr8.4:7745278-7745297 | None:intergenic | 30.0% | |
| TTTGGTCTCTTGTATCATTT+AGG | - | chr8.4:7746848-7746867 | MS.gene96328:CDS | 30.0% | |
| ! | AAAACCAAGATAGTCTTGAT+TGG | - | chr8.4:7745450-7745469 | MS.gene96328:intron | 30.0% |
| ! | AATACCTACTCAAGTCTTAT+AGG | - | chr8.4:7746820-7746839 | MS.gene96328:CDS | 30.0% |
| ! | ATCTTCTTCTGGCTAATATA+TGG | + | chr8.4:7746691-7746710 | None:intergenic | 30.0% |
| ! | ATGGAACCTTTTACAATAGA+TGG | + | chr8.4:7747139-7747158 | None:intergenic | 30.0% |
| ! | CTATTTGTGTAACCATGTTT+TGG | + | chr8.4:7745986-7746005 | None:intergenic | 30.0% |
| ! | TTGTTCTGCAAAGTGTTATT+TGG | - | chr8.4:7745582-7745601 | MS.gene96328:CDS | 30.0% |
| !! | CACATAGTAGAGTATTGTTA+TGG | + | chr8.4:7747776-7747795 | None:intergenic | 30.0% |
| AAGTCCTATAAGACTTGAGT+AGG | + | chr8.4:7746827-7746846 | None:intergenic | 35.0% | |
| ACAAAGGGATGTTGAAATTG+AGG | - | chr8.4:7746651-7746670 | MS.gene96328:CDS | 35.0% | |
| ACGCTAGATTATATAGAACG+AGG | + | chr8.4:7746464-7746483 | None:intergenic | 35.0% | |
| ACTACTAACTCTATGGTATC+TGG | - | chr8.4:7745800-7745819 | MS.gene96328:CDS | 35.0% | |
| AGATCATGTACAAGATTGCA+CGG | + | chr8.4:7746560-7746579 | None:intergenic | 35.0% | |
| AGTGGTGAGTTGTTCAATAA+TGG | - | chr8.4:7746130-7746149 | MS.gene96328:CDS | 35.0% | |
| ATACTCTACTATGTGCTTCT+TGG | - | chr8.4:7747781-7747800 | MS.gene96328:CDS | 35.0% | |
| ATGCACATCATTAGCAGTTA+AGG | + | chr8.4:7747092-7747111 | None:intergenic | 35.0% | |
| ATTCCCATAACAAGTGTGTT+AGG | + | chr8.4:7745506-7745525 | None:intergenic | 35.0% | |
| ATTGAGGATGCATAAGAAGA+GGG | - | chr8.4:7746093-7746112 | MS.gene96328:intron | 35.0% | |
| ATTTCAACATCCCTTTGTCT+AGG | + | chr8.4:7746649-7746668 | None:intergenic | 35.0% | |
| ATTTCAGCATCAGTTTGAAG+TGG | + | chr8.4:7745740-7745759 | None:intergenic | 35.0% | |
| ATTTCGAAGATGAGACATTG+AGG | - | chr8.4:7746077-7746096 | MS.gene96328:intron | 35.0% | |
| CACAAAGAAGAAAGATAGCA+TGG | - | chr8.4:7746204-7746223 | MS.gene96328:CDS | 35.0% | |
| CAGTTAAGGATTCATGATCA+AGG | + | chr8.4:7747078-7747097 | None:intergenic | 35.0% | |
| CATCCAAATATACTCAGTAC+TGG | - | chr8.4:7747603-7747622 | MS.gene96328:CDS | 35.0% | |
| CCATACATAGCTCTTAAAAG+AGG | + | chr8.4:7745530-7745549 | None:intergenic | 35.0% | |
| CTTACATGTTGCAATTGTTC+AGG | - | chr8.4:7747422-7747441 | MS.gene96328:CDS | 35.0% | |
| CTTCAAACTGATGCTGAAAT+AGG | - | chr8.4:7745740-7745759 | MS.gene96328:intron | 35.0% | |
| GAAAATACCGTTGCATCAAA+AGG | - | chr8.4:7746385-7746404 | MS.gene96328:intron | 35.0% | |
| GAATTTGGTATTTGTGTTGC+AGG | - | chr8.4:7747722-7747741 | MS.gene96328:CDS | 35.0% | |
| GTATTCTTTGGCAAACACAA+AGG | + | chr8.4:7747577-7747596 | None:intergenic | 35.0% | |
| TAGTCCAATCAAGACTATCT+TGG | + | chr8.4:7745457-7745476 | None:intergenic | 35.0% | |
| TCATGTGGAACATATTTGGA+AGG | + | chr8.4:7746367-7746386 | None:intergenic | 35.0% | |
| TGATTTCTCAGGAAATCTCA+TGG | - | chr8.4:7745550-7745569 | MS.gene96328:CDS | 35.0% | |
| TGGATGGAGATTGTATTCTT+TGG | + | chr8.4:7747589-7747608 | None:intergenic | 35.0% | |
| TGGTTAAAACTAGATCCTCT+TGG | + | chr8.4:7745923-7745942 | None:intergenic | 35.0% | |
| TGTGTTAGGAAGAGTTGAAA+GGG | + | chr8.4:7745492-7745511 | None:intergenic | 35.0% | |
| TTAAGATTCCCTTCGGAAAT+AGG | + | chr8.4:7746298-7746317 | None:intergenic | 35.0% | |
| TTCTATGCAATCTTCCAAAG+GGG | - | chr8.4:7746036-7746055 | MS.gene96328:intron | 35.0% | |
| TTGTGTTGCAGGGTTATATT+TGG | - | chr8.4:7747733-7747752 | MS.gene96328:CDS | 35.0% | |
| ! | ACGAGTTGCAACATTTTCTA+TGG | - | chr8.4:7747329-7747348 | MS.gene96328:CDS | 35.0% |
| ! | CAACATTTTCTATGGCTGTA+AGG | - | chr8.4:7747337-7747356 | MS.gene96328:CDS | 35.0% |
| ! | CAAGTCTTATAGGACTTGTT+TGG | - | chr8.4:7746830-7746849 | MS.gene96328:CDS | 35.0% |
| ! | CAGTACTGAGTATATTTGGA+TGG | + | chr8.4:7747605-7747624 | None:intergenic | 35.0% |
| ! | GTTTTCTCCAAACCATGATA+AGG | + | chr8.4:7746786-7746805 | None:intergenic | 35.0% |
| ! | TCTTCCTAACACACTTGTTA+TGG | - | chr8.4:7745499-7745518 | MS.gene96328:intron | 35.0% |
| ! | TCTTCGAAATTTGAAGTCCT+CGG | + | chr8.4:7746067-7746086 | None:intergenic | 35.0% |
| ! | TGCATGTTTAAGATTCCCTT+CGG | + | chr8.4:7746305-7746324 | None:intergenic | 35.0% |
| !! | ATGTGCAACTCCTTGTTATT+AGG | + | chr8.4:7746250-7746269 | None:intergenic | 35.0% |
| !! | CCTCTTTTAAGAGCTATGTA+TGG | - | chr8.4:7745527-7745546 | MS.gene96328:intron | 35.0% |
| !! | CTTCCTAACACACTTGTTAT+GGG | - | chr8.4:7745500-7745519 | MS.gene96328:intron | 35.0% |
| !! | TCCATATAAAAAGAGCACCA+AGG | + | chr8.4:7745418-7745437 | None:intergenic | 35.0% |
| !! | TGGTAATGGACCTAATAACA+AGG | - | chr8.4:7746237-7746256 | MS.gene96328:CDS | 35.0% |
| !!! | AAAGCTGCTTCTACTGATTT+TGG | - | chr8.4:7746331-7746350 | MS.gene96328:CDS | 35.0% |
| !!! | TCCTTGGTGCTCTTTTTATA+TGG | - | chr8.4:7745414-7745433 | MS.gene96328:intron | 35.0% |
| AAACTAGATCCTCTTGGAGT+TGG | + | chr8.4:7745917-7745936 | None:intergenic | 40.0% | |
| AAAGCATAGGATTTGGAGGA+GGG | + | chr8.4:7746165-7746184 | None:intergenic | 40.0% | |
| AACTGATGCTGAAATAGGTG+AGG | - | chr8.4:7745745-7745764 | MS.gene96328:intron | 40.0% | |
| AAGAAGAAAGATAGCATGGG+TGG | - | chr8.4:7746208-7746227 | MS.gene96328:CDS | 40.0% | |
| ACAAAGGGAACAATACCTTG+GGG | + | chr8.4:7747561-7747580 | None:intergenic | 40.0% | |
| ACAAGTACCTAGACTGAACA+TGG | + | chr8.4:7747194-7747213 | None:intergenic | 40.0% | |
| ACACAAAGGGAACAATACCT+TGG | + | chr8.4:7747563-7747582 | None:intergenic | 40.0% | |
| AGAACATGAGTCCTAGACAA+AGG | - | chr8.4:7746635-7746654 | MS.gene96328:CDS | 40.0% | |
| AGGAGTTGCACATGTTTGTT+TGG | - | chr8.4:7746257-7746276 | MS.gene96328:CDS | 40.0% | |
| ATCTCAATACTGTCTGATGC+TGG | - | chr8.4:7747157-7747176 | MS.gene96328:CDS | 40.0% | |
| CACAAAGGGAACAATACCTT+GGG | + | chr8.4:7747562-7747581 | None:intergenic | 40.0% | |
| CATTGAGGATGCATAAGAAG+AGG | - | chr8.4:7746092-7746111 | MS.gene96328:intron | 40.0% | |
| CTGCAAAAACAGCGACAAAA+CGG | + | chr8.4:7745301-7745320 | None:intergenic | 40.0% | |
| GAACATGAGTCCTAGACAAA+GGG | - | chr8.4:7746636-7746655 | MS.gene96328:CDS | 40.0% | |
| GACAAGACTCATCCTTATCA+TGG | - | chr8.4:7746771-7746790 | MS.gene96328:CDS | 40.0% | |
| GACTCATCCTTATCATGGTT+TGG | - | chr8.4:7746776-7746795 | MS.gene96328:CDS | 40.0% | |
| GCTATGTATGGTGATTTCTC+AGG | - | chr8.4:7745539-7745558 | MS.gene96328:CDS | 40.0% | |
| GGATGGTAAACTTCATGTTG+TGG | - | chr8.4:7745766-7745785 | MS.gene96328:intron | 40.0% | |
| GGTGAGTTGTTCAATAATGG+TGG | - | chr8.4:7746133-7746152 | MS.gene96328:CDS | 40.0% | |
| GTGAATCAGCTGCTAAGAAA+TGG | + | chr8.4:7745379-7745398 | None:intergenic | 40.0% | |
| GTGTGTTAGGAAGAGTTGAA+AGG | + | chr8.4:7745493-7745512 | None:intergenic | 40.0% | |
| GTTATAGAAGCTGCAGTTTC+AGG | + | chr8.4:7745671-7745690 | None:intergenic | 40.0% | |
| TCAATAGCAATTGGTATGCG+TGG | - | chr8.4:7747393-7747412 | MS.gene96328:CDS | 40.0% | |
| TGAATATGCAGGTCTGTTCA+TGG | - | chr8.4:7747275-7747294 | MS.gene96328:CDS | 40.0% | |
| TTCACACCAGATCAATGTTC+TGG | - | chr8.4:7745269-7745288 | MS.gene96328:intron | 40.0% | |
| TTGAGGATGCATAAGAAGAG+GGG | - | chr8.4:7746094-7746113 | MS.gene96328:intron | 40.0% | |
| TTTCCACATGCAATCAGCTT+AGG | + | chr8.4:7747309-7747328 | None:intergenic | 40.0% | |
| ! | ACGCATACCAATTGCTATTG+AGG | + | chr8.4:7747394-7747413 | None:intergenic | 40.0% |
| ! | AGCATCAGACAGTATTGAGA+TGG | + | chr8.4:7747158-7747177 | None:intergenic | 40.0% |
| ! | AGTCTTGTCATAACACTTGC+TGG | + | chr8.4:7746760-7746779 | None:intergenic | 40.0% |
| ! | CACCCAGTACTGAGTATATT+TGG | + | chr8.4:7747609-7747628 | None:intergenic | 40.0% |
| ! | CTTGTAGAACCAGAAAGCAT+AGG | + | chr8.4:7746178-7746197 | None:intergenic | 40.0% |
| ! | GAACCAGAAAGCATAGGATT+TGG | + | chr8.4:7746172-7746191 | None:intergenic | 40.0% |
| ! | GATGCAACGGTATTTTCATG+TGG | + | chr8.4:7746382-7746401 | None:intergenic | 40.0% |
| ! | TCTGACGTTGTTTCGCTTAA+TGG | - | chr8.4:7745707-7745726 | MS.gene96328:intron | 40.0% |
| !! | GTGTAACCATGTTTTGGACT+CGG | + | chr8.4:7745980-7745999 | None:intergenic | 40.0% |
| AAGAAAGATAGCATGGGTGG+TGG | - | chr8.4:7746211-7746230 | MS.gene96328:CDS | 45.0% | |
| AAGATTGCACGGACGTTTGA+CGG | + | chr8.4:7746549-7746568 | None:intergenic | 45.0% | |
| AGTGCTTCACCTATTTCCGA+AGG | - | chr8.4:7746286-7746305 | MS.gene96328:CDS | 45.0% | |
| ATGGCTGTAAGGTTCTTGAC+CGG | - | chr8.4:7747348-7747367 | MS.gene96328:CDS | 45.0% | |
| CCACGAGCTTCAAATCTAAC+CGG | - | chr8.4:7745857-7745876 | MS.gene96328:intron | 45.0% | |
| CCTCCAAATCCTATGCTTTC+TGG | - | chr8.4:7746166-7746185 | MS.gene96328:CDS | 45.0% | |
| CTAATGATGTGCATGCATGC+AGG | - | chr8.4:7747098-7747117 | MS.gene96328:CDS | 45.0% | |
| CTTCCAAGTCCATCTTCTTC+TGG | + | chr8.4:7746702-7746721 | None:intergenic | 45.0% | |
| GATGCTGAAATAGGTGAGGA+TGG | - | chr8.4:7745749-7745768 | MS.gene96328:intron | 45.0% | |
| GTGCTTCACCTATTTCCGAA+GGG | - | chr8.4:7746287-7746306 | MS.gene96328:CDS | 45.0% | |
| TAGCATACGGTTCAGTTCGT+TGG | - | chr8.4:7745237-7745256 | MS.gene96328:intron | 45.0% | |
| TCAAGAGAACCAACTCCAAG+AGG | - | chr8.4:7745905-7745924 | MS.gene96328:intron | 45.0% | |
| ! | AAGAAGATGGACTTGGAAGG+AGG | - | chr8.4:7746703-7746722 | MS.gene96328:CDS | 45.0% |
| ! | ATACTGTCTGATGCTGGTCT+TGG | - | chr8.4:7747163-7747182 | MS.gene96328:CDS | 45.0% |
| ! | CAGAAGAAGATGGACTTGGA+AGG | - | chr8.4:7746700-7746719 | MS.gene96328:CDS | 45.0% |
| ! | CCAGAAAGCATAGGATTTGG+AGG | + | chr8.4:7746169-7746188 | None:intergenic | 45.0% |
| ! | CTTGTCATAACACTTGCTGG+AGG | + | chr8.4:7746757-7746776 | None:intergenic | 45.0% |
| ! | GAAAGCATAGGATTTGGAGG+AGG | + | chr8.4:7746166-7746185 | None:intergenic | 45.0% |
| ! | TAGCCAGAAGAAGATGGACT+TGG | - | chr8.4:7746696-7746715 | MS.gene96328:CDS | 45.0% |
| !! | ATGGGTGGTGGAAATGGTAA+TGG | - | chr8.4:7746223-7746242 | MS.gene96328:CDS | 45.0% |
| !! | CGGCGCTTTACTTTGAAACA+TGG | + | chr8.4:7745960-7745979 | None:intergenic | 45.0% |
| !! | CTTTCTGGTTCTACAAGTGC+TGG | - | chr8.4:7746181-7746200 | MS.gene96328:CDS | 45.0% |
| AGGATGCATAAGAAGAGGGG+AGG | - | chr8.4:7746097-7746116 | MS.gene96328:intron | 50.0% | |
| CAGCCTAAGCTGATTGCATG+TGG | - | chr8.4:7747303-7747322 | MS.gene96328:CDS | 50.0% | |
| CATACGGTTCAGTTCGTTGG+TGG | - | chr8.4:7745240-7745259 | MS.gene96328:intron | 50.0% | |
| GCGGCAACCTCAATAGCAAT+TGG | - | chr8.4:7747384-7747403 | MS.gene96328:CDS | 50.0% | |
| GGAATGGCCATGTTCAGTCT+AGG | - | chr8.4:7747184-7747203 | MS.gene96328:CDS | 50.0% | |
| GGATGCATAAGAAGAGGGGA+GGG | - | chr8.4:7746098-7746117 | MS.gene96328:intron | 50.0% | |
| ! | AAGATGGACTTGGAAGGAGG+AGG | - | chr8.4:7746706-7746725 | MS.gene96328:CDS | 50.0% |
| ! | AGATGGACTTGGAAGGAGGA+GGG | - | chr8.4:7746707-7746726 | MS.gene96328:CDS | 50.0% |
| ! | CCGGTTAGATTTGAAGCTCG+TGG | + | chr8.4:7745860-7745879 | None:intergenic | 50.0% |
| !! | AAAGCGCCGAGTCCAAAACA+TGG | - | chr8.4:7745971-7745990 | MS.gene96328:intron | 50.0% |
| !! | GATAGCATGGGTGGTGGAAA+TGG | - | chr8.4:7746217-7746236 | MS.gene96328:CDS | 50.0% |
| !! | GTCTGATGCTGGTCTTGGAA+TGG | - | chr8.4:7747168-7747187 | MS.gene96328:CDS | 50.0% |
| TGCATAAGAAGAGGGGAGGG+AGG | - | chr8.4:7746101-7746120 | MS.gene96328:intron | 55.0% | |
| ! | GATGGACTTGGAAGGAGGAG+GGG | - | chr8.4:7746708-7746727 | MS.gene96328:CDS | 55.0% |
| AGTCCTCGGAGTAGCCCCTT+TGG | + | chr8.4:7746053-7746072 | None:intergenic | 60.0% | |
| CTTCCAAAGGGGCTACTCCG+AGG | - | chr8.4:7746047-7746066 | MS.gene96328:intron | 60.0% | |
| GACCGGTCCAGCTGTGATTG+CGG | - | chr8.4:7747365-7747384 | MS.gene96328:CDS | 60.0% | |
| GAGGTTGCCGCAATCACAGC+TGG | + | chr8.4:7747375-7747394 | None:intergenic | 60.0% | |
| TGCCGCAATCACAGCTGGAC+CGG | + | chr8.4:7747370-7747389 | None:intergenic | 60.0% | |
| TTGCAGGCTGCACTTCCCCA+AGG | - | chr8.4:7747543-7747562 | MS.gene96328:CDS | 60.0% | |
| ! | AGGGGAGGGAGGAGTATGAG+TGG | - | chr8.4:7746112-7746131 | MS.gene96328:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 7745170 | 7747810 | 7745170 | ID=MS.gene96328 |
| chr8.4 | mRNA | 7745170 | 7747810 | 7745170 | ID=MS.gene96328.t1;Parent=MS.gene96328 |
| chr8.4 | exon | 7746574 | 7747810 | 7746574 | ID=MS.gene96328.t1.exon1;Parent=MS.gene96328.t1 |
| chr8.4 | CDS | 7746574 | 7747810 | 7746574 | ID=cds.MS.gene96328.t1;Parent=MS.gene96328.t1 |
| chr8.4 | exon | 7746111 | 7746363 | 7746111 | ID=MS.gene96328.t1.exon2;Parent=MS.gene96328.t1 |
| chr8.4 | CDS | 7746111 | 7746363 | 7746111 | ID=cds.MS.gene96328.t1;Parent=MS.gene96328.t1 |
| chr8.4 | exon | 7745775 | 7745860 | 7745775 | ID=MS.gene96328.t1.exon3;Parent=MS.gene96328.t1 |
| chr8.4 | CDS | 7745775 | 7745860 | 7745775 | ID=cds.MS.gene96328.t1;Parent=MS.gene96328.t1 |
| chr8.4 | exon | 7745537 | 7745694 | 7745537 | ID=MS.gene96328.t1.exon4;Parent=MS.gene96328.t1 |
| chr8.4 | CDS | 7745537 | 7745694 | 7745537 | ID=cds.MS.gene96328.t1;Parent=MS.gene96328.t1 |
| chr8.4 | exon | 7745355 | 7745431 | 7745355 | ID=MS.gene96328.t1.exon5;Parent=MS.gene96328.t1 |
| chr8.4 | CDS | 7745355 | 7745431 | 7745355 | ID=cds.MS.gene96328.t1;Parent=MS.gene96328.t1 |
| chr8.4 | exon | 7745170 | 7745236 | 7745170 | ID=MS.gene96328.t1.exon6;Parent=MS.gene96328.t1 |
| chr8.4 | CDS | 7745170 | 7745236 | 7745170 | ID=cds.MS.gene96328.t1;Parent=MS.gene96328.t1 |
| Gene Sequence |
| Protein sequence |
