Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050369.t1 | XP_003611102.1 | 99.3 | 1007 | 7 | 0 | 1 | 1007 | 1 | 1007 | 0.00E+00 | 2024.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050369.t1 | Q9M2R0 | 70.3 | 777 | 220 | 6 | 233 | 1007 | 6 | 773 | 0.0e+00 | 1161.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050369.t1 | G7KC44 | 99.3 | 1007 | 7 | 0 | 1 | 1007 | 1 | 1007 | 0.0e+00 | 2024.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050364 | MS.gene050369 | 0.957936 | 8.10E-116 | -1.69E-46 |
MS.gene050366 | MS.gene050369 | 0.905119 | 6.01E-80 | -1.69E-46 |
MS.gene050367 | MS.gene050369 | 0.919228 | 5.85E-87 | -1.69E-46 |
MS.gene050369 | MS.gene06756 | 0.815911 | 7.25E-52 | -1.69E-46 |
MS.gene050369 | MS.gene072791 | 0.965873 | 3.58E-125 | -1.69E-46 |
MS.gene050369 | MS.gene24107 | 0.802087 | 6.63E-49 | -1.69E-46 |
MS.gene050369 | MS.gene54146 | 0.813285 | 2.77E-51 | -1.69E-46 |
MS.gene050369 | MS.gene84143 | 0.812662 | 3.79E-51 | -1.69E-46 |
MS.gene050369 | MS.gene96328 | 0.810587 | 1.07E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050369.t1 | MTR_5g010390 | 99.305 | 1007 | 7 | 0 | 1 | 1007 | 1 | 1007 | 0.0 | 2076 |
MS.gene050369.t1 | MTR_8g031270 | 64.075 | 1016 | 343 | 12 | 1 | 1007 | 1 | 1003 | 0.0 | 1344 |
MS.gene050369.t1 | MTR_7g076900 | 60.019 | 1033 | 367 | 13 | 1 | 1007 | 1 | 1013 | 0.0 | 1260 |
MS.gene050369.t1 | MTR_7g092770 | 69.320 | 779 | 226 | 6 | 233 | 1007 | 6 | 775 | 0.0 | 1157 |
MS.gene050369.t1 | MTR_0305s0020 | 68.855 | 777 | 232 | 4 | 233 | 1007 | 6 | 774 | 0.0 | 1139 |
MS.gene050369.t1 | MTR_4g066150 | 67.658 | 773 | 239 | 4 | 235 | 1007 | 9 | 770 | 0.0 | 1122 |
MS.gene050369.t1 | MTR_0291s0010 | 62.262 | 787 | 280 | 6 | 235 | 1007 | 14 | 797 | 0.0 | 1063 |
MS.gene050369.t1 | MTR_4g023460 | 64.333 | 757 | 258 | 6 | 259 | 1007 | 390 | 1142 | 0.0 | 1052 |
MS.gene050369.t1 | MTR_4g023460 | 32.673 | 202 | 135 | 1 | 4 | 204 | 1 | 202 | 2.56e-25 | 114 |
MS.gene050369.t1 | MTR_3g027150 | 62.200 | 791 | 278 | 9 | 235 | 1007 | 35 | 822 | 0.0 | 1050 |
MS.gene050369.t1 | MTR_4g033215 | 62.404 | 782 | 278 | 9 | 232 | 1007 | 273 | 1044 | 0.0 | 1025 |
MS.gene050369.t1 | MTR_4g033215 | 37.121 | 132 | 74 | 3 | 5 | 133 | 3 | 128 | 4.50e-16 | 84.0 |
MS.gene050369.t1 | MTR_4g107850 | 51.380 | 761 | 327 | 12 | 265 | 1007 | 303 | 1038 | 0.0 | 783 |
MS.gene050369.t1 | MTR_4g107850 | 49.242 | 132 | 63 | 1 | 5 | 132 | 18 | 149 | 3.61e-30 | 129 |
MS.gene050369.t1 | MTR_4g057675 | 50.444 | 789 | 360 | 10 | 232 | 1007 | 13 | 783 | 0.0 | 782 |
MS.gene050369.t1 | MTR_6g028050 | 50.131 | 764 | 341 | 13 | 263 | 1007 | 284 | 1026 | 0.0 | 773 |
MS.gene050369.t1 | MTR_6g028050 | 38.760 | 129 | 77 | 1 | 5 | 131 | 6 | 134 | 5.21e-22 | 103 |
MS.gene050369.t1 | MTR_6g027540 | 49.017 | 763 | 342 | 13 | 265 | 1007 | 274 | 1009 | 0.0 | 750 |
MS.gene050369.t1 | MTR_6g027540 | 44.961 | 129 | 70 | 1 | 5 | 132 | 11 | 139 | 6.37e-29 | 125 |
MS.gene050369.t1 | MTR_4g071870 | 48.728 | 786 | 338 | 12 | 235 | 1007 | 16 | 749 | 0.0 | 744 |
MS.gene050369.t1 | MTR_1g015540 | 42.785 | 790 | 410 | 14 | 237 | 1007 | 7 | 773 | 0.0 | 619 |
MS.gene050369.t1 | MTR_5g096980 | 38.462 | 793 | 442 | 15 | 230 | 1007 | 2 | 763 | 0.0 | 549 |
MS.gene050369.t1 | MTR_4g023250 | 60.769 | 130 | 49 | 1 | 877 | 1006 | 1 | 128 | 1.26e-48 | 169 |
MS.gene050369.t1 | MTR_4g023230 | 47.541 | 122 | 49 | 1 | 794 | 915 | 49 | 155 | 4.93e-31 | 119 |
MS.gene050369.t1 | MTR_6g028070 | 39.535 | 129 | 76 | 1 | 5 | 131 | 6 | 134 | 2.69e-25 | 105 |
MS.gene050369.t1 | MTR_4g023240 | 70.175 | 57 | 17 | 0 | 731 | 787 | 13 | 69 | 1.75e-20 | 86.7 |
MS.gene050369.t1 | MTR_4g023390 | 44.231 | 104 | 36 | 2 | 880 | 983 | 16 | 97 | 3.37e-20 | 86.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050369.t1 | AT4G11610 | 75.538 | 1022 | 218 | 8 | 1 | 1007 | 3 | 1007 | 0.0 | 1622 |
MS.gene050369.t1 | AT4G11610 | 75.342 | 1022 | 224 | 8 | 1 | 1007 | 3 | 1011 | 0.0 | 1621 |
MS.gene050369.t1 | AT4G11610 | 76.977 | 860 | 180 | 6 | 163 | 1007 | 18 | 874 | 0.0 | 1401 |
MS.gene050369.t1 | AT4G00700 | 56.403 | 1023 | 413 | 10 | 1 | 1007 | 1 | 1006 | 0.0 | 1185 |
MS.gene050369.t1 | AT4G00700 | 56.403 | 1023 | 413 | 10 | 1 | 1007 | 1 | 1006 | 0.0 | 1185 |
MS.gene050369.t1 | AT3G57880 | 70.270 | 777 | 220 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1175 |
MS.gene050369.t1 | AT3G57880 | 70.270 | 777 | 220 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1175 |
MS.gene050369.t1 | AT3G57880 | 70.270 | 777 | 220 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1175 |
MS.gene050369.t1 | AT3G57880 | 70.270 | 777 | 220 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1175 |
MS.gene050369.t1 | AT5G12970 | 69.845 | 776 | 222 | 4 | 232 | 1007 | 6 | 769 | 0.0 | 1151 |
MS.gene050369.t1 | AT1G51570 | 68.935 | 779 | 230 | 5 | 233 | 1007 | 6 | 776 | 0.0 | 1148 |
MS.gene050369.t1 | AT1G22610 | 54.932 | 1034 | 428 | 14 | 5 | 1007 | 3 | 1029 | 0.0 | 1136 |
MS.gene050369.t1 | AT5G48060 | 53.009 | 1047 | 432 | 14 | 5 | 1007 | 6 | 1036 | 0.0 | 1103 |
MS.gene050369.t1 | AT3G61300 | 53.585 | 1032 | 393 | 22 | 1 | 1007 | 2 | 972 | 0.0 | 1101 |
MS.gene050369.t1 | AT5G06850 | 62.341 | 786 | 280 | 6 | 235 | 1007 | 12 | 794 | 0.0 | 1077 |
MS.gene050369.t1 | AT1G04150 | 51.791 | 1033 | 440 | 18 | 3 | 1007 | 10 | 1012 | 0.0 | 1034 |
MS.gene050369.t1 | AT1G74720 | 43.538 | 1091 | 507 | 21 | 2 | 1007 | 15 | 1081 | 0.0 | 882 |
MS.gene050369.t1 | AT4G20080 | 54.557 | 779 | 328 | 10 | 236 | 1007 | 15 | 774 | 0.0 | 868 |
MS.gene050369.t1 | AT5G17980 | 49.604 | 758 | 347 | 13 | 263 | 1007 | 314 | 1049 | 0.0 | 772 |
MS.gene050369.t1 | AT5G17980 | 39.716 | 141 | 79 | 3 | 5 | 139 | 6 | 146 | 1.94e-22 | 104 |
MS.gene050369.t1 | AT3G03680 | 49.613 | 776 | 326 | 20 | 265 | 1007 | 274 | 1017 | 0.0 | 761 |
MS.gene050369.t1 | AT3G03680 | 41.406 | 128 | 75 | 0 | 5 | 132 | 8 | 135 | 2.11e-26 | 117 |
MS.gene050369.t1 | AT3G61720 | 38.424 | 812 | 438 | 22 | 235 | 1007 | 7 | 795 | 1.33e-160 | 493 |
MS.gene050369.t1 | AT5G03435 | 40.385 | 780 | 404 | 25 | 235 | 1000 | 7 | 739 | 9.35e-157 | 481 |
MS.gene050369.t1 | AT5G03435 | 42.586 | 580 | 296 | 16 | 235 | 807 | 7 | 556 | 2.81e-129 | 403 |
MS.gene050369.t1 | AT5G44760 | 46.798 | 406 | 165 | 10 | 235 | 635 | 5 | 364 | 7.89e-108 | 344 |
MS.gene050369.t1 | AT1G03370 | 36.066 | 122 | 74 | 2 | 274 | 393 | 3 | 122 | 8.75e-14 | 76.3 |
MS.gene050369.t1 | AT1G03370 | 36.066 | 122 | 74 | 2 | 274 | 393 | 3 | 122 | 1.02e-13 | 76.3 |
Find 236 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACAACAAAGACTTGAAAAT+TGG | 0.180427 | 5.2:-3577356 | MS.gene050369:CDS |
GGCCCATGAGCTTCCTTCTA+TGG | 0.210935 | 5.2:-3578551 | MS.gene050369:CDS |
CCCAACTGGTGTTAAGAAAA+TGG | 0.211222 | 5.2:-3577258 | MS.gene050369:CDS |
AGAAGAACCTTCTCCATCTT+TGG | 0.231137 | 5.2:+3579338 | None:intergenic |
CTATCTGGTGGAACTCTTAA+AGG | 0.240838 | 5.2:+3578310 | None:intergenic |
ATTATGATCAACTTAAAGTT+AGG | 0.248856 | 5.2:-3579393 | MS.gene050369:CDS |
CGGAAGCCTGTTTCGAAATC+TGG | 0.258205 | 5.2:+3576281 | None:intergenic |
ACTAACTCAAGTTCATTTCT+TGG | 0.262659 | 5.2:-3579150 | MS.gene050369:CDS |
GTGTATTGCTCGTTGTATTT+TGG | 0.268384 | 5.2:+3577455 | None:intergenic |
TAATGGTTGTTCGAAACTTT+TGG | 0.275614 | 5.2:+3579286 | None:intergenic |
TCTCATGTTGGTTTGCTTCC+CGG | 0.299961 | 5.2:-3576868 | MS.gene050369:CDS |
TTTCTGTTTGTTAGCTGCTT+TGG | 0.314831 | 5.2:-3576367 | MS.gene050369:CDS |
TGCCGTTGATGGTTTGTGTT+AGG | 0.316788 | 5.2:+3578847 | None:intergenic |
CTCGGTGGAGGAAGGGTTGT+TGG | 0.318759 | 5.2:-3578658 | MS.gene050369:CDS |
TGAACTTGAGTTAGTAGCTT+TGG | 0.320839 | 5.2:+3579158 | None:intergenic |
AAGAAAGGGGATAAAGTTAA+AGG | 0.332557 | 5.2:-3578253 | MS.gene050369:CDS |
GTGTGTTTGCAGTTGGAAAA+TGG | 0.332879 | 5.2:-3576950 | MS.gene050369:CDS |
TTTCTCTACCTATTCTTGAT+AGG | 0.343636 | 5.2:-3576825 | MS.gene050369:CDS |
CTGATTCTTATCATAGTGTT+TGG | 0.343905 | 5.2:+3578468 | None:intergenic |
AAAAGGATCTTAATCCTGTT+TGG | 0.345946 | 5.2:-3579260 | MS.gene050369:CDS |
TGATAGGTGTATGGAACTTC+AGG | 0.347349 | 5.2:-3576809 | MS.gene050369:intron |
GTTGATGCTGATGCCGTTGA+TGG | 0.350294 | 5.2:+3578836 | None:intergenic |
TGAAGATCATGTAATACTTT+CGG | 0.351594 | 5.2:-3577903 | MS.gene050369:CDS |
TGAACAAGGACTGTTGTAAT+AGG | 0.354570 | 5.2:+3576900 | None:intergenic |
CTTCCTTCTATGGATCTTAC+CGG | 0.373034 | 5.2:-3578541 | MS.gene050369:CDS |
CAGATGTTGACTCACATCTA+TGG | 0.373205 | 5.2:-3577025 | MS.gene050369:CDS |
GGCATCCCAGATTTCGAAAC+AGG | 0.373780 | 5.2:-3576287 | MS.gene050369:CDS |
TTGCTTGTTCTTCACCCAAC+TGG | 0.374868 | 5.2:-3577272 | MS.gene050369:CDS |
GAAGAACCTTCTCCATCTTT+GGG | 0.382654 | 5.2:+3579339 | None:intergenic |
TCGGGTGCCAAAGGACTATC+TGG | 0.383261 | 5.2:+3578295 | None:intergenic |
ACAAACGGTTGTAGGTGATT+TGG | 0.383411 | 5.2:-3576460 | MS.gene050369:CDS |
ATCATCAAGGCGATACCATT+CGG | 0.385812 | 5.2:+3578276 | None:intergenic |
TTCCCAAATCAGTGGTGAAA+AGG | 0.392570 | 5.2:-3577381 | MS.gene050369:CDS |
CAAATGGTGGCTGGTTTAGC+AGG | 0.392665 | 5.2:-3576324 | MS.gene050369:CDS |
CGGGAGTCTTGATCCATTTG+TGG | 0.400322 | 5.2:-3578521 | MS.gene050369:CDS |
ATAGAATCATTCATTCTAGA+TGG | 0.401919 | 5.2:-3577796 | MS.gene050369:CDS |
TAGCAAAATACGGTCACAAA+TGG | 0.411100 | 5.2:-3577511 | MS.gene050369:CDS |
TGTAGGTGATTTGGCTAGCC+AGG | 0.412061 | 5.2:-3576451 | MS.gene050369:CDS |
AAAGATCTTCATTCCATTGT+GGG | 0.420444 | 5.2:+3577948 | None:intergenic |
TGATCAACATCCACGGCAAC+AGG | 0.421658 | 5.2:+3577758 | None:intergenic |
CCGATTCTCACCTCCACAAA+TGG | 0.427809 | 5.2:+3578508 | None:intergenic |
TACCGCATTCTTACAAGGTC+AGG | 0.427894 | 5.2:+3576513 | None:intergenic |
AAGGACTCAACAGAAGGATT+TGG | 0.428137 | 5.2:+3578973 | None:intergenic |
TCTTTAAGTGCAAAATCAAC+CGG | 0.428893 | 5.2:+3578694 | None:intergenic |
GTGAGTTGATGCTAGCTGTT+TGG | 0.429438 | 5.2:-3578231 | MS.gene050369:CDS |
TTATGATCAACTTAAAGTTA+GGG | 0.431458 | 5.2:-3579392 | MS.gene050369:CDS |
AATTCCTCATCCATTTCATC+GGG | 0.432095 | 5.2:+3576561 | None:intergenic |
AACATACTATCAGTTCTTGC+AGG | 0.433599 | 5.2:+3576228 | None:intergenic |
TCATGTGTTGTTTCTCATGT+TGG | 0.437544 | 5.2:-3576880 | MS.gene050369:CDS |
CCGGGAAAAGATGAGATCAT+TGG | 0.439731 | 5.2:-3577863 | MS.gene050369:CDS |
AAAGAAACAAGTCCGTTTCT+CGG | 0.443107 | 5.2:-3578676 | MS.gene050369:CDS |
TCGAACAACCATTAAAGAAA+AGG | 0.443124 | 5.2:-3579277 | MS.gene050369:CDS |
GGTTGAAGATCGAGTTGGTC+CGG | 0.444254 | 5.2:-3577882 | MS.gene050369:CDS |
CGCATATCGACTCTTGAAAC+AGG | 0.446486 | 5.2:-3577320 | MS.gene050369:CDS |
ACTTCAGCATGATTATTTGT+TGG | 0.446986 | 5.2:+3578949 | None:intergenic |
TTCATGTGTGGAGGGTATCT+TGG | 0.447757 | 5.2:+3576615 | None:intergenic |
TCATCAAGGCGATACCATTC+GGG | 0.449913 | 5.2:+3578277 | None:intergenic |
ACAACAAAGACTTGAAAATT+GGG | 0.452516 | 5.2:-3577355 | MS.gene050369:CDS |
ACCTATTCTTGATAGGTGTA+TGG | 0.457302 | 5.2:-3576818 | MS.gene050369:CDS |
AATTCAGCTACGGCTATGTC+TGG | 0.461073 | 5.2:-3577708 | MS.gene050369:CDS |
CCGAGTTCTAAAACACCAAT+TGG | 0.462500 | 5.2:+3577605 | None:intergenic |
CTTGGTAAAGTTAGCCTCAC+AGG | 0.462596 | 5.2:-3579132 | MS.gene050369:CDS |
GCCCCACTGCAAAACAGTTA+TGG | 0.464071 | 5.2:-3577634 | MS.gene050369:CDS |
CCAACTGGTGTTAAGAAAAT+GGG | 0.464187 | 5.2:-3577257 | MS.gene050369:CDS |
GTTGAAGATCGAGTTGGTCC+GGG | 0.464534 | 5.2:-3577881 | MS.gene050369:CDS |
TAGAAGCTCTCATTCCAAAC+AGG | 0.467298 | 5.2:+3579246 | None:intergenic |
GGATTCATGCACTGTTGAGC+TGG | 0.468052 | 5.2:-3576422 | MS.gene050369:CDS |
TGCACCTTGACATATGCATC+CGG | 0.472060 | 5.2:+3578022 | None:intergenic |
CTCGGAGTGCTGAATGCAAT+AGG | 0.474307 | 5.2:-3577587 | MS.gene050369:CDS |
CGGGAAAAGATGAGATCATT+GGG | 0.475103 | 5.2:-3577862 | MS.gene050369:CDS |
GTGAGATAGTGTAGATTGGA+AGG | 0.475750 | 5.2:+3579207 | None:intergenic |
TCTATCATGCTCCGAGGTTG+TGG | 0.475877 | 5.2:-3578105 | MS.gene050369:CDS |
ACCCTTCCTCCACCGAGAAA+CGG | 0.478302 | 5.2:+3578664 | None:intergenic |
TCAGAATCCTGAGTGGCATC+AGG | 0.478592 | 5.2:-3578449 | MS.gene050369:CDS |
TCCCAAATCAGTGGTGAAAA+GGG | 0.479687 | 5.2:-3577380 | MS.gene050369:CDS |
GCCGTTGATGGTTTGTGTTA+GGG | 0.479912 | 5.2:+3578848 | None:intergenic |
AGCATGATTATTTGTTGGCA+AGG | 0.480052 | 5.2:+3578954 | None:intergenic |
TATCCCCTTTCTTATCATCA+AGG | 0.480098 | 5.2:+3578263 | None:intergenic |
TGACATATGCATCCGGGAAA+CGG | 0.482033 | 5.2:+3578029 | None:intergenic |
AAGAGTGAGATAGTGTAGAT+TGG | 0.487071 | 5.2:+3579203 | None:intergenic |
GCATATGTCAAGGTGCAGAT+AGG | 0.488617 | 5.2:-3578016 | MS.gene050369:CDS |
AACAGAAGGATTTGGAATTG+AGG | 0.489461 | 5.2:+3578981 | None:intergenic |
CTCCACAGCGTTCAGCGGTA+TGG | 0.490783 | 5.2:+3577832 | None:intergenic |
GTCCGTTTCTCGGTGGAGGA+AGG | 0.491607 | 5.2:-3578666 | MS.gene050369:CDS |
CGTATCACTGTTGTAGTAGC+AGG | 0.491771 | 5.2:+3578136 | None:intergenic |
ACATATTGTGTAGCAAAATA+CGG | 0.491890 | 5.2:-3577521 | MS.gene050369:CDS |
ATCGCCTTGATGATAAGAAA+GGG | 0.493364 | 5.2:-3578267 | MS.gene050369:CDS |
TGTAGTACACCCCGATGAAA+TGG | 0.494237 | 5.2:-3576571 | MS.gene050369:CDS |
AGTTCCACCAGATAGTCCTT+TGG | 0.496430 | 5.2:-3578302 | MS.gene050369:CDS |
GGTAGAATACAAACGGTTGT+AGG | 0.496800 | 5.2:-3576468 | MS.gene050369:CDS |
GATCGTTTGAGGAGCGTGGC+TGG | 0.499227 | 5.2:-3576489 | MS.gene050369:CDS |
CTGCCACTATGTTTACTGCT+TGG | 0.501177 | 5.2:+3577102 | None:intergenic |
AAATTCCTCATCCATTTCAT+CGG | 0.503321 | 5.2:+3576560 | None:intergenic |
CCTACGGGTTCAATGATGAA+TGG | 0.504774 | 5.2:-3578919 | MS.gene050369:CDS |
AGTATTACATGATCTTCAAA+AGG | 0.505539 | 5.2:+3577908 | None:intergenic |
TCATTCTAGATGGTTCAACT+TGG | 0.507484 | 5.2:-3577786 | MS.gene050369:CDS |
AACATAGTGGCAGCGCGGCT+CGG | 0.511333 | 5.2:-3577092 | MS.gene050369:CDS |
GCTGAAGTCCACGGACCTAC+GGG | 0.511884 | 5.2:-3578934 | MS.gene050369:CDS |
GGAAGCCTGTTTCGAAATCT+GGG | 0.513817 | 5.2:+3576282 | None:intergenic |
TTTGCAGTTGGAAAATGGTT+AGG | 0.514024 | 5.2:-3576945 | MS.gene050369:CDS |
CCATTTGTGGAGGTGAGAAT+CGG | 0.514386 | 5.2:-3578508 | MS.gene050369:CDS |
TGTACTAGAAGTTGTGATCA+AGG | 0.515018 | 5.2:-3578392 | MS.gene050369:CDS |
AAAAGATCTTCATTCCATTG+TGG | 0.517456 | 5.2:+3577947 | None:intergenic |
CAGTTATGGAGGCCACCAAT+TGG | 0.517888 | 5.2:-3577620 | MS.gene050369:CDS |
TTTGTATGTCAGGGTCGTTA+AGG | 0.518318 | 5.2:-3578572 | MS.gene050369:CDS |
GAAAGAAGTTTGCCTTGCTA+CGG | 0.518974 | 5.2:+3576994 | None:intergenic |
AAACCAGCCACCATTTGAAA+AGG | 0.520236 | 5.2:+3576330 | None:intergenic |
ACAAGTCCGTTTCTCGGTGG+AGG | 0.522181 | 5.2:-3578670 | MS.gene050369:CDS |
TCCCGAAAATGCATTACGTT+AGG | 0.522411 | 5.2:-3577160 | MS.gene050369:CDS |
TGTACTAGCTTCATAGGTTG+TGG | 0.523049 | 5.2:+3578742 | None:intergenic |
TGCATGTGTACTAGCTTCAT+AGG | 0.523340 | 5.2:+3578736 | None:intergenic |
AGCAAAATACGGTCACAAAT+GGG | 0.523407 | 5.2:-3577510 | MS.gene050369:CDS |
CACAATCTACTACCCAAAGA+TGG | 0.523857 | 5.2:-3579351 | MS.gene050369:CDS |
TTTGTAGAACTTTACTTCGA+CGG | 0.525442 | 5.2:-3579309 | MS.gene050369:CDS |
CTCCCGGTAAGATCCATAGA+AGG | 0.525748 | 5.2:+3578538 | None:intergenic |
TGCTGAAGTCCACGGACCTA+CGG | 0.525914 | 5.2:-3578935 | MS.gene050369:CDS |
TTGAGTTAGTAGCTTTGGAA+TGG | 0.526396 | 5.2:+3579163 | None:intergenic |
TCCGTTTCTCGGTGGAGGAA+GGG | 0.529722 | 5.2:-3578665 | MS.gene050369:CDS |
GTAGCAGGCGTGCTGTCCAC+AGG | 0.533552 | 5.2:+3578151 | None:intergenic |
ATTTCATCAGCTTCATACTT+CGG | 0.537653 | 5.2:+3578778 | None:intergenic |
GAATGCGGTATGATCGTTTG+AGG | 0.538021 | 5.2:-3576500 | MS.gene050369:CDS |
TAGTAGCTTTGGAATGGCAA+TGG | 0.541351 | 5.2:+3579169 | None:intergenic |
TCTCGTGTAAGAGGTGAGCT+TGG | 0.541487 | 5.2:-3579042 | MS.gene050369:CDS |
TTGATGCTAGCTGTTTGGAT+TGG | 0.541583 | 5.2:-3578226 | MS.gene050369:CDS |
TACATGATCTTCAAAAGGCT+CGG | 0.542481 | 5.2:+3577913 | None:intergenic |
CTCAGTTACATCACTACAGC+CGG | 0.542758 | 5.2:-3578713 | MS.gene050369:CDS |
TCCATACACCTATCAAGAAT+AGG | 0.544412 | 5.2:+3576817 | None:intergenic |
TATCGCCTTGATGATAAGAA+AGG | 0.544556 | 5.2:-3578268 | MS.gene050369:CDS |
GGTGGAGGAAGGGTTGTTGG+CGG | 0.552425 | 5.2:-3578655 | MS.gene050369:CDS |
AAGTTAGGGGTAGATGTGGT+TGG | 0.552972 | 5.2:-3579378 | MS.gene050369:CDS |
AAGAAGTTGATCGGTGCAGA+CGG | 0.553790 | 5.2:+3576261 | None:intergenic |
GATCATACCGCATTCTTACA+AGG | 0.554571 | 5.2:+3576508 | None:intergenic |
GTAGGTGATTTGGCTAGCCA+GGG | 0.554831 | 5.2:-3576450 | MS.gene050369:CDS |
TGTGGGTTTAGAGTTCTAGC+AGG | 0.559920 | 5.2:+3577965 | None:intergenic |
GTGTAGGCAAAATCAACTCC+GGG | 0.562576 | 5.2:+3576850 | None:intergenic |
ATGGAGCATGCGCCGTAGCA+AGG | 0.566672 | 5.2:-3577006 | MS.gene050369:CDS |
TTCTTGTGTTCATGTGTGGA+GGG | 0.569126 | 5.2:+3576607 | None:intergenic |
ATTCTTGTGTTCATGTGTGG+AGG | 0.569293 | 5.2:+3576606 | None:intergenic |
AAGACAACTGCATCAGCTTG+AGG | 0.569540 | 5.2:+3579096 | None:intergenic |
AGTGTAGGCAAAATCAACTC+CGG | 0.570441 | 5.2:+3576849 | None:intergenic |
CGCCTCTCCACAGCGTTCAG+CGG | 0.570587 | 5.2:+3577827 | None:intergenic |
ATTTGGCTAGCCAGGGTGAG+AGG | 0.571757 | 5.2:-3576443 | MS.gene050369:CDS |
CAGCATCAACAACACTCCAC+TGG | 0.572183 | 5.2:-3578823 | MS.gene050369:CDS |
CTTAAAGTTAGGGGTAGATG+TGG | 0.572186 | 5.2:-3579382 | MS.gene050369:CDS |
CTTTCGGTTGAAGATCGAGT+TGG | 0.574501 | 5.2:-3577887 | MS.gene050369:CDS |
AGACAACTGCATCAGCTTGA+GGG | 0.574535 | 5.2:+3579097 | None:intergenic |
CACAAATGGATCAAGACTCC+CGG | 0.575988 | 5.2:+3578522 | None:intergenic |
CGTGGCTGGTAGAATACAAA+CGG | 0.577843 | 5.2:-3576475 | MS.gene050369:CDS |
TTCCTTCTATGGATCTTACC+GGG | 0.579035 | 5.2:-3578540 | MS.gene050369:CDS |
GTTGGCAAGGACTCAACAGA+AGG | 0.579568 | 5.2:+3578967 | None:intergenic |
ACTATCCGTTGGAAAAGCGC+GGG | 0.579782 | 5.2:-3579071 | MS.gene050369:CDS |
CCTACTGTGAGGACTGTGGC+AGG | 0.580485 | 5.2:+3577416 | None:intergenic |
CACTATCCGTTGGAAAAGCG+CGG | 0.582031 | 5.2:-3579072 | MS.gene050369:CDS |
TAGCAGGTTTCTATTTCATG+AGG | 0.582086 | 5.2:-3576308 | MS.gene050369:CDS |
CGATACCATTCGGGTGCCAA+AGG | 0.582226 | 5.2:+3578286 | None:intergenic |
GATCCATAGAAGGAAGCTCA+TGG | 0.583095 | 5.2:+3578548 | None:intergenic |
TTCGGATGCAGCTTCACCTG+TGG | 0.586183 | 5.2:-3578167 | MS.gene050369:CDS |
AGTTGTCTTGCACTATCCGT+TGG | 0.586747 | 5.2:-3579082 | MS.gene050369:CDS |
CAGTTCTTGCAGGAAGTCGA+CGG | 0.588288 | 5.2:+3576238 | None:intergenic |
ACCACTTCTTTACGAAGCGG+TGG | 0.588806 | 5.2:+3577059 | None:intergenic |
GAGATTCTTGTGTTCATGTG+TGG | 0.591639 | 5.2:+3576603 | None:intergenic |
TACAACAGTGATACGTTCAA+AGG | 0.595585 | 5.2:-3578128 | MS.gene050369:CDS |
GACTCCACCCAATGAAAACA+AGG | 0.596227 | 5.2:-3577565 | MS.gene050369:CDS |
TCGAGTTGCATGACTGCGAA+TGG | 0.597451 | 5.2:+3577137 | None:intergenic |
CTTGGAAAAGCCTGTTGCCG+TGG | 0.598251 | 5.2:-3577768 | MS.gene050369:CDS |
ATCCATAGAAGGAAGCTCAT+GGG | 0.599253 | 5.2:+3578549 | None:intergenic |
ACCGCTTCGTAAAGAAGTGG+TGG | 0.601145 | 5.2:-3577057 | MS.gene050369:CDS |
AGTTCTAAAACACCAATTGG+TGG | 0.601566 | 5.2:+3577608 | None:intergenic |
GTGCATGAATCCTCTCACCC+TGG | 0.601936 | 5.2:+3576433 | None:intergenic |
TTGCAAGCAGAATTCAGCTA+CGG | 0.601937 | 5.2:-3577718 | MS.gene050369:CDS |
CTACTACCCAAAGATGGAGA+AGG | 0.602886 | 5.2:-3579345 | MS.gene050369:CDS |
GTACATATGATCTAGTTGAA+AGG | 0.603113 | 5.2:-3578603 | MS.gene050369:CDS |
TCCCTAACACAAACCATCAA+CGG | 0.603684 | 5.2:-3578849 | MS.gene050369:CDS |
CAGCTACGGCTATGTCTGGA+TGG | 0.603841 | 5.2:-3577704 | MS.gene050369:CDS |
GAAAATGGGAGAACTTCACT+TGG | 0.605162 | 5.2:-3577243 | MS.gene050369:CDS |
ACACCCCGATGAAATGGATG+AGG | 0.606414 | 5.2:-3576565 | MS.gene050369:CDS |
TATGATCAACTTAAAGTTAG+GGG | 0.607138 | 5.2:-3579391 | MS.gene050369:CDS |
TGTGTGGAGGGTATCTTGGT+CGG | 0.608323 | 5.2:+3576619 | None:intergenic |
GCACCTTGACATATGCATCC+GGG | 0.608916 | 5.2:+3578023 | None:intergenic |
TCCACCACTTCTTTACGAAG+CGG | 0.610176 | 5.2:+3577056 | None:intergenic |
GTCACAAATGGGTCAGAACA+AGG | 0.610662 | 5.2:-3577499 | MS.gene050369:CDS |
GAGTCTTGATCCATTTGTGG+AGG | 0.611797 | 5.2:-3578518 | MS.gene050369:CDS |
ATGAAAACAAGGGATGGTAG+AGG | 0.612015 | 5.2:-3577554 | MS.gene050369:CDS |
CTAGAACTCTAAACCCACAA+TGG | 0.614323 | 5.2:-3577961 | MS.gene050369:CDS |
AACTAGATCATATGTACTCG+CGG | 0.615706 | 5.2:+3578609 | None:intergenic |
CAAAGACTTGAAAATTGGGA+AGG | 0.616941 | 5.2:-3577351 | MS.gene050369:CDS |
TCATTGAACCCGTAGGTCCG+TGG | 0.617562 | 5.2:+3578926 | None:intergenic |
CACCCAATGAAAACAAGGGA+TGG | 0.618631 | 5.2:-3577560 | MS.gene050369:CDS |
CATGAACACAAGAATCTCAC+AGG | 0.619367 | 5.2:-3576598 | MS.gene050369:CDS |
GTTGGGTGAAGAACAAGCAA+TGG | 0.619420 | 5.2:+3577275 | None:intergenic |
ATAGTCCTTTGGCACCCGAA+TGG | 0.620871 | 5.2:-3578291 | MS.gene050369:CDS |
TACCGCTGAACGCTGTGGAG+AGG | 0.622911 | 5.2:-3577829 | MS.gene050369:CDS |
AATAATCATGCTGAAGTCCA+CGG | 0.626372 | 5.2:-3578943 | MS.gene050369:CDS |
CCTGCCACAGTCCTCACAGT+AGG | 0.628716 | 5.2:-3577416 | MS.gene050369:CDS |
GTGAGTATCTGCATATCCAG+TGG | 0.628850 | 5.2:+3578807 | None:intergenic |
TTTGACAATTCCCAAATCAG+TGG | 0.630492 | 5.2:-3577389 | MS.gene050369:CDS |
ATCCTGACCTTGTAAGAATG+CGG | 0.634955 | 5.2:-3576515 | MS.gene050369:CDS |
AATACAACGAGCAATACACT+TGG | 0.635555 | 5.2:-3577451 | MS.gene050369:CDS |
AGCACAAGACTTGATTCCAA+CGG | 0.636163 | 5.2:-3578059 | MS.gene050369:CDS |
TACCATACCGCTGAACGCTG+TGG | 0.636602 | 5.2:-3577834 | MS.gene050369:CDS |
AGTCGACGGAAGAAGTTGAT+CGG | 0.641660 | 5.2:+3576252 | None:intergenic |
CTTCAGCTGATCAACATCCA+CGG | 0.642798 | 5.2:+3577751 | None:intergenic |
GTCGAAGTAAAGTTCTACAA+AGG | 0.652130 | 5.2:+3579311 | None:intergenic |
TCACCAAGCAGTAAACATAG+TGG | 0.653759 | 5.2:-3577105 | MS.gene050369:CDS |
GGTGCCAAAGGACTATCTGG+TGG | 0.654724 | 5.2:+3578298 | None:intergenic |
GTTGATGGTTTGTGTTAGGG+AGG | 0.657066 | 5.2:+3578851 | None:intergenic |
GAACGCTGTGGAGAGGCGTG+CGG | 0.658744 | 5.2:-3577822 | MS.gene050369:CDS |
GCCACCGCTTCGTAAAGAAG+TGG | 0.658854 | 5.2:-3577060 | MS.gene050369:CDS |
AAAAGATGAGATCATTGGGA+GGG | 0.659454 | 5.2:-3577858 | MS.gene050369:CDS |
CCATTCATCATTGAACCCGT+AGG | 0.661796 | 5.2:+3578919 | None:intergenic |
TGAGAAACAACACATGAACA+AGG | 0.662150 | 5.2:+3576886 | None:intergenic |
CCACTGCAAAACAGTTATGG+AGG | 0.665722 | 5.2:-3577631 | MS.gene050369:CDS |
GTGATGAAATGTGTGTCTTG+AGG | 0.667671 | 5.2:+3578873 | None:intergenic |
CTACGGCTATGTCTGGATGG+AGG | 0.669332 | 5.2:-3577701 | MS.gene050369:CDS |
TTTCCCGGATGCATATGTCA+AGG | 0.671093 | 5.2:-3578026 | MS.gene050369:CDS |
TCGCCTTGATGATAAGAAAG+GGG | 0.672272 | 5.2:-3578266 | MS.gene050369:CDS |
GTGCTTCTACAACATTGACA+CGG | 0.674701 | 5.2:+3578077 | None:intergenic |
GTGAGAATCGGCAATTACAG+AGG | 0.675225 | 5.2:-3578496 | MS.gene050369:CDS |
GAAACAAGTCCGTTTCTCGG+TGG | 0.679691 | 5.2:-3578673 | MS.gene050369:CDS |
GTATGATCGTTTGAGGAGCG+TGG | 0.680386 | 5.2:-3576493 | MS.gene050369:CDS |
ACACGGACGTACCACAACCT+CGG | 0.680879 | 5.2:+3578094 | None:intergenic |
GGTTAGGTGATATTTGCATG+TGG | 0.684481 | 5.2:-3576929 | MS.gene050369:CDS |
GAAAAGATGAGATCATTGGG+AGG | 0.684584 | 5.2:-3577859 | MS.gene050369:CDS |
ATACAACGAGCAATACACTT+GGG | 0.691267 | 5.2:-3577450 | MS.gene050369:CDS |
TATCGACTCTTGAAACAGGA+CGG | 0.694274 | 5.2:-3577316 | MS.gene050369:CDS |
CAACGAGCAATACACTTGGG+AGG | 0.698127 | 5.2:-3577447 | MS.gene050369:CDS |
GAATGGTTTATCTCGTGACA+AGG | 0.701389 | 5.2:-3578902 | MS.gene050369:CDS |
ACTCCACCCAATGAAAACAA+GGG | 0.702014 | 5.2:-3577564 | MS.gene050369:CDS |
GACACCTACTGTGAGGACTG+TGG | 0.709482 | 5.2:+3577412 | None:intergenic |
CAAAGGTCTATCATGCTCCG+AGG | 0.711392 | 5.2:-3578111 | MS.gene050369:CDS |
ATGAATAAAGAAGTAGCACG+CGG | 0.714106 | 5.2:+3576393 | None:intergenic |
CAGTAAACATAGTGGCAGCG+CGG | 0.720769 | 5.2:-3577097 | MS.gene050369:CDS |
TGTCAAAGACACCTACTGTG+AGG | 0.734255 | 5.2:+3577405 | None:intergenic |
ATTCCTCATCCATTTCATCG+GGG | 0.747292 | 5.2:+3576562 | None:intergenic |
ATAAGAATCAGAATCCTGAG+TGG | 0.751357 | 5.2:-3578456 | MS.gene050369:CDS |
GGACAAAAGAAGTACCTGTG+AGG | 0.754029 | 5.2:+3579118 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATGCAATCATGTATAAAT+AGG | + | chr5.2:3578893-3578912 | None:intergenic | 20.0% |
!! | TATGCAATCATGTATAAATA+GGG | + | chr5.2:3578892-3578911 | None:intergenic | 20.0% |
!!! | ATTAAGATCCTTTTCTTTAA+TGG | + | chr5.2:3576348-3576367 | None:intergenic | 20.0% |
!!! | TATCAGTGATGTAAATTTTA+AGG | + | chr5.2:3576598-3576617 | None:intergenic | 20.0% |
! | ACAACAAAGACTTGAAAATT+GGG | - | chr5.2:3578259-3578278 | MS.gene050369:CDS | 25.0% |
! | ACATATTGTGTAGCAAAATA+CGG | - | chr5.2:3578093-3578112 | MS.gene050369:CDS | 25.0% |
! | AGTATTACATGATCTTCAAA+AGG | + | chr5.2:3577709-3577728 | None:intergenic | 25.0% |
! | ATAGAATCATTCATTCTAGA+TGG | - | chr5.2:3577818-3577837 | MS.gene050369:CDS | 25.0% |
! | CCTGATATTGAAAATAAAGT+TGG | + | chr5.2:3578973-3578992 | None:intergenic | 25.0% |
! | TGAAGATCATGTAATACTTT+CGG | - | chr5.2:3577711-3577730 | MS.gene050369:CDS | 25.0% |
!! | ATATGTTACTCCTTTTCAAA+TGG | - | chr5.2:3579274-3579293 | MS.gene050369:CDS | 25.0% |
!!! | ATTTGGAATTGAGGATTTTA+TGG | + | chr5.2:3576627-3576646 | None:intergenic | 25.0% |
!!! | CCAACTTTATTTTCAATATC+AGG | - | chr5.2:3578970-3578989 | MS.gene050369:CDS | 25.0% |
!!! | GATGTATTTTTTGTATGTCA+GGG | - | chr5.2:3577033-3577052 | MS.gene050369:CDS | 25.0% |
AAAAGATCTTCATTCCATTG+TGG | + | chr5.2:3577670-3577689 | None:intergenic | 30.0% | |
AAAAGGATCTTAATCCTGTT+TGG | - | chr5.2:3576354-3576373 | MS.gene050369:CDS | 30.0% | |
AAAGATCTTCATTCCATTGT+GGG | + | chr5.2:3577669-3577688 | None:intergenic | 30.0% | |
AAATTCCTCATCCATTTCAT+CGG | + | chr5.2:3579057-3579076 | None:intergenic | 30.0% | |
AAGAAAGGGGATAAAGTTAA+AGG | - | chr5.2:3577361-3577380 | MS.gene050369:CDS | 30.0% | |
ACTAACTCAAGTTCATTTCT+TGG | - | chr5.2:3576464-3576483 | MS.gene050369:CDS | 30.0% | |
ACTTCAGCATGATTATTTGT+TGG | + | chr5.2:3576668-3576687 | None:intergenic | 30.0% | |
ATTTCATCAGCTTCATACTT+CGG | + | chr5.2:3576839-3576858 | None:intergenic | 30.0% | |
CACAACAAAGACTTGAAAAT+TGG | - | chr5.2:3578258-3578277 | MS.gene050369:CDS | 30.0% | |
CTGATTCTTATCATAGTGTT+TGG | + | chr5.2:3577149-3577168 | None:intergenic | 30.0% | |
GTACATATGATCTAGTTGAA+AGG | - | chr5.2:3577011-3577030 | MS.gene050369:CDS | 30.0% | |
TCGAACAACCATTAAAGAAA+AGG | - | chr5.2:3576337-3576356 | MS.gene050369:CDS | 30.0% | |
TCTTTAAGTGCAAAATCAAC+CGG | + | chr5.2:3576923-3576942 | None:intergenic | 30.0% | |
TTTCTCTACCTATTCTTGAT+AGG | - | chr5.2:3578789-3578808 | MS.gene050369:CDS | 30.0% | |
TTTGTAGAACTTTACTTCGA+CGG | - | chr5.2:3576305-3576324 | MS.gene050369:CDS | 30.0% | |
! | AATAGGTAGAGAAAAAGTGT+AGG | + | chr5.2:3578783-3578802 | None:intergenic | 30.0% |
! | CTCATCAAAGATGATTTTGT+AGG | - | chr5.2:3577253-3577272 | MS.gene050369:CDS | 30.0% |
! | TAATGGTTGTTCGAAACTTT+TGG | + | chr5.2:3576331-3576350 | None:intergenic | 30.0% |
! | TCAGGTTTTTGCATTTTCAA+AGG | - | chr5.2:3577183-3577202 | MS.gene050369:CDS | 30.0% |
!!! | GGATGTATTTTTTGTATGTC+AGG | - | chr5.2:3577032-3577051 | MS.gene050369:CDS | 30.0% |
AAAAGATGAGATCATTGGGA+GGG | - | chr5.2:3577756-3577775 | MS.gene050369:CDS | 35.0% | |
AAAGAAACAAGTCCGTTTCT+CGG | - | chr5.2:3576938-3576957 | MS.gene050369:CDS | 35.0% | |
AACATACTATCAGTTCTTGC+AGG | + | chr5.2:3579389-3579408 | None:intergenic | 35.0% | |
AACTAGATCATATGTACTCG+CGG | + | chr5.2:3577008-3577027 | None:intergenic | 35.0% | |
AAGAGTGAGATAGTGTAGAT+TGG | + | chr5.2:3576414-3576433 | None:intergenic | 35.0% | |
AATAATCATGCTGAAGTCCA+CGG | - | chr5.2:3576671-3576690 | MS.gene050369:intron | 35.0% | |
AATACAACGAGCAATACACT+TGG | - | chr5.2:3578163-3578182 | MS.gene050369:CDS | 35.0% | |
AATTCCTCATCCATTTCATC+GGG | + | chr5.2:3579056-3579075 | None:intergenic | 35.0% | |
ACCTATTCTTGATAGGTGTA+TGG | - | chr5.2:3578796-3578815 | MS.gene050369:CDS | 35.0% | |
AGCAAAATACGGTCACAAAT+GGG | - | chr5.2:3578104-3578123 | MS.gene050369:CDS | 35.0% | |
ATAAGAATCAGAATCCTGAG+TGG | - | chr5.2:3577158-3577177 | MS.gene050369:CDS | 35.0% | |
ATACAACGAGCAATACACTT+GGG | - | chr5.2:3578164-3578183 | MS.gene050369:CDS | 35.0% | |
ATGAATAAAGAAGTAGCACG+CGG | + | chr5.2:3579224-3579243 | None:intergenic | 35.0% | |
CAAAGACTTGAAAATTGGGA+AGG | - | chr5.2:3578263-3578282 | MS.gene050369:CDS | 35.0% | |
GTCGAAGTAAAGTTCTACAA+AGG | + | chr5.2:3576306-3576325 | None:intergenic | 35.0% | |
TACAACAGTGATACGTTCAA+AGG | - | chr5.2:3577486-3577505 | MS.gene050369:CDS | 35.0% | |
TACATGATCTTCAAAAGGCT+CGG | + | chr5.2:3577704-3577723 | None:intergenic | 35.0% | |
TAGCAAAATACGGTCACAAA+TGG | - | chr5.2:3578103-3578122 | MS.gene050369:CDS | 35.0% | |
TAGCAGGTTTCTATTTCATG+AGG | - | chr5.2:3579306-3579325 | MS.gene050369:CDS | 35.0% | |
TATCCCCTTTCTTATCATCA+AGG | + | chr5.2:3577354-3577373 | None:intergenic | 35.0% | |
TCATTCTAGATGGTTCAACT+TGG | - | chr5.2:3577828-3577847 | MS.gene050369:CDS | 35.0% | |
TCCATACACCTATCAAGAAT+AGG | + | chr5.2:3578800-3578819 | None:intergenic | 35.0% | |
TGAACAAGGACTGTTGTAAT+AGG | + | chr5.2:3578717-3578736 | None:intergenic | 35.0% | |
TGAACTTGAGTTAGTAGCTT+TGG | + | chr5.2:3576459-3576478 | None:intergenic | 35.0% | |
TGAGAAACAACACATGAACA+AGG | + | chr5.2:3578731-3578750 | None:intergenic | 35.0% | |
TGTACTAGAAGTTGTGATCA+AGG | - | chr5.2:3577222-3577241 | MS.gene050369:CDS | 35.0% | |
TTTGACAATTCCCAAATCAG+TGG | - | chr5.2:3578225-3578244 | MS.gene050369:CDS | 35.0% | |
TTTGCAGTTGGAAAATGGTT+AGG | - | chr5.2:3578669-3578688 | MS.gene050369:CDS | 35.0% | |
! | AACAGAAGGATTTGGAATTG+AGG | + | chr5.2:3576636-3576655 | None:intergenic | 35.0% |
! | AGCATGATTATTTGTTGGCA+AGG | + | chr5.2:3576663-3576682 | None:intergenic | 35.0% |
! | ATCGCCTTGATGATAAGAAA+GGG | - | chr5.2:3577347-3577366 | MS.gene050369:CDS | 35.0% |
! | ATTTTCTGATGCATGGCATT+CGG | - | chr5.2:3577429-3577448 | MS.gene050369:CDS | 35.0% |
! | CCAACTGGTGTTAAGAAAAT+GGG | - | chr5.2:3578357-3578376 | MS.gene050369:CDS | 35.0% |
! | CCATTTTCTTAACACCAGTT+GGG | + | chr5.2:3578359-3578378 | None:intergenic | 35.0% |
! | GGAATTGAGGATTTTATGGT+TGG | + | chr5.2:3576623-3576642 | None:intergenic | 35.0% |
! | GTGTATTGCTCGTTGTATTT+TGG | + | chr5.2:3578162-3578181 | None:intergenic | 35.0% |
! | TATCGCCTTGATGATAAGAA+AGG | - | chr5.2:3577346-3577365 | MS.gene050369:CDS | 35.0% |
! | TGTTACTCCTTTTCAAATGG+TGG | - | chr5.2:3579277-3579296 | MS.gene050369:CDS | 35.0% |
! | TTTCTGTTTGTTAGCTGCTT+TGG | - | chr5.2:3579247-3579266 | MS.gene050369:CDS | 35.0% |
!! | AGTTCTAAAACACCAATTGG+TGG | + | chr5.2:3578009-3578028 | None:intergenic | 35.0% |
!! | ATGAAGCATTTTCTGATGCA+TGG | - | chr5.2:3577422-3577441 | MS.gene050369:CDS | 35.0% |
!! | ATGATTTTGTAGGTATCGTG+AGG | - | chr5.2:3577263-3577282 | MS.gene050369:CDS | 35.0% |
!! | TCATGTGTTGTTTCTCATGT+TGG | - | chr5.2:3578734-3578753 | MS.gene050369:CDS | 35.0% |
!! | TTGAGTTAGTAGCTTTGGAA+TGG | + | chr5.2:3576454-3576473 | None:intergenic | 35.0% |
!!! | CCAATTGGTGTTTTAGAACT+CGG | - | chr5.2:3578009-3578028 | MS.gene050369:CDS | 35.0% |
!!! | TACCATCCCTTGTTTTCATT+GGG | + | chr5.2:3578059-3578078 | None:intergenic | 35.0% |
AAACCAGCCACCATTTGAAA+AGG | + | chr5.2:3579287-3579306 | None:intergenic | 40.0% | |
AAGGACTCAACAGAAGGATT+TGG | + | chr5.2:3576644-3576663 | None:intergenic | 40.0% | |
ACAAACGGTTGTAGGTGATT+TGG | - | chr5.2:3579154-3579173 | MS.gene050369:CDS | 40.0% | |
ACTCCACCCAATGAAAACAA+GGG | - | chr5.2:3578050-3578069 | MS.gene050369:CDS | 40.0% | |
AGAAGAACCTTCTCCATCTT+TGG | + | chr5.2:3576279-3576298 | None:intergenic | 40.0% | |
AGCACAAGACTTGATTCCAA+CGG | - | chr5.2:3577555-3577574 | MS.gene050369:CDS | 40.0% | |
AGTGTAGGCAAAATCAACTC+CGG | + | chr5.2:3578768-3578787 | None:intergenic | 40.0% | |
ATCATCAAGGCGATACCATT+CGG | + | chr5.2:3577341-3577360 | None:intergenic | 40.0% | |
ATCCATAGAAGGAAGCTCAT+GGG | + | chr5.2:3577068-3577087 | None:intergenic | 40.0% | |
ATCCTGACCTTGTAAGAATG+CGG | - | chr5.2:3579099-3579118 | MS.gene050369:CDS | 40.0% | |
ATGAAAACAAGGGATGGTAG+AGG | - | chr5.2:3578060-3578079 | MS.gene050369:CDS | 40.0% | |
ATTCCTCATCCATTTCATCG+GGG | + | chr5.2:3579055-3579074 | None:intergenic | 40.0% | |
ATTCTTGTGTTCATGTGTGG+AGG | + | chr5.2:3579011-3579030 | None:intergenic | 40.0% | |
CACAATCTACTACCCAAAGA+TGG | - | chr5.2:3576263-3576282 | MS.gene050369:CDS | 40.0% | |
CACCAGAAAAAACTGTCATG+AGG | + | chr5.2:3578647-3578666 | None:intergenic | 40.0% | |
CATGAACACAAGAATCTCAC+AGG | - | chr5.2:3579016-3579035 | MS.gene050369:CDS | 40.0% | |
CGGGAAAAGATGAGATCATT+GGG | - | chr5.2:3577752-3577771 | MS.gene050369:CDS | 40.0% | |
CTAGAACTCTAAACCCACAA+TGG | - | chr5.2:3577653-3577672 | MS.gene050369:CDS | 40.0% | |
CTATCTGGTGGAACTCTTAA+AGG | + | chr5.2:3577307-3577326 | None:intergenic | 40.0% | |
CTTAAAGTTAGGGGTAGATG+TGG | - | chr5.2:3576232-3576251 | MS.gene050369:CDS | 40.0% | |
CTTCCTTCTATGGATCTTAC+CGG | - | chr5.2:3577073-3577092 | MS.gene050369:CDS | 40.0% | |
GAAAAGATGAGATCATTGGG+AGG | - | chr5.2:3577755-3577774 | MS.gene050369:CDS | 40.0% | |
GAAAATGGGAGAACTTCACT+TGG | - | chr5.2:3578371-3578390 | MS.gene050369:CDS | 40.0% | |
GAAAGAAGTTTGCCTTGCTA+CGG | + | chr5.2:3578623-3578642 | None:intergenic | 40.0% | |
GAAGAACCTTCTCCATCTTT+GGG | + | chr5.2:3576278-3576297 | None:intergenic | 40.0% | |
GAATGGTTTATCTCGTGACA+AGG | - | chr5.2:3576712-3576731 | MS.gene050369:intron | 40.0% | |
GAGATTCTTGTGTTCATGTG+TGG | + | chr5.2:3579014-3579033 | None:intergenic | 40.0% | |
GATCATACCGCATTCTTACA+AGG | + | chr5.2:3579109-3579128 | None:intergenic | 40.0% | |
GGTAGAATACAAACGGTTGT+AGG | - | chr5.2:3579146-3579165 | MS.gene050369:CDS | 40.0% | |
GGTTAGGTGATATTTGCATG+TGG | - | chr5.2:3578685-3578704 | MS.gene050369:CDS | 40.0% | |
GTGAGATAGTGTAGATTGGA+AGG | + | chr5.2:3576410-3576429 | None:intergenic | 40.0% | |
GTGATGAAATGTGTGTCTTG+AGG | + | chr5.2:3576744-3576763 | None:intergenic | 40.0% | |
GTGCTTCTACAACATTGACA+CGG | + | chr5.2:3577540-3577559 | None:intergenic | 40.0% | |
GTGTGTTTGCAGTTGGAAAA+TGG | - | chr5.2:3578664-3578683 | MS.gene050369:CDS | 40.0% | |
TAGAAGCTCTCATTCCAAAC+AGG | + | chr5.2:3576371-3576390 | None:intergenic | 40.0% | |
TCACCAAGCAGTAAACATAG+TGG | - | chr5.2:3578509-3578528 | MS.gene050369:CDS | 40.0% | |
TCCCAAATCAGTGGTGAAAA+GGG | - | chr5.2:3578234-3578253 | MS.gene050369:CDS | 40.0% | |
TCCCGAAAATGCATTACGTT+AGG | - | chr5.2:3578454-3578473 | MS.gene050369:CDS | 40.0% | |
TCCCTAACACAAACCATCAA+CGG | - | chr5.2:3576765-3576784 | MS.gene050369:intron | 40.0% | |
TGATAGGTGTATGGAACTTC+AGG | - | chr5.2:3578805-3578824 | MS.gene050369:CDS | 40.0% | |
TTCCCAAATCAGTGGTGAAA+AGG | - | chr5.2:3578233-3578252 | MS.gene050369:CDS | 40.0% | |
TTCCTTCTATGGATCTTACC+GGG | - | chr5.2:3577074-3577093 | MS.gene050369:CDS | 40.0% | |
TTCTTGTGTTCATGTGTGGA+GGG | + | chr5.2:3579010-3579029 | None:intergenic | 40.0% | |
TTGATGCTAGCTGTTTGGAT+TGG | - | chr5.2:3577388-3577407 | MS.gene050369:CDS | 40.0% | |
TTGCAAGCAGAATTCAGCTA+CGG | - | chr5.2:3577896-3577915 | MS.gene050369:CDS | 40.0% | |
TTTGTATGTCAGGGTCGTTA+AGG | - | chr5.2:3577042-3577061 | MS.gene050369:CDS | 40.0% | |
! | AGGTCAGGATTTTTGCTTGT+TGG | + | chr5.2:3579089-3579108 | None:intergenic | 40.0% |
! | CCAATGATCTCATCTTTTCC+CGG | + | chr5.2:3577754-3577773 | None:intergenic | 40.0% |
! | CCCAACTGGTGTTAAGAAAA+TGG | - | chr5.2:3578356-3578375 | MS.gene050369:CDS | 40.0% |
! | CCCATTTTCTTAACACCAGT+TGG | + | chr5.2:3578360-3578379 | None:intergenic | 40.0% |
! | CTCCATAACTGTTTTGCAGT+GGG | + | chr5.2:3577985-3578004 | None:intergenic | 40.0% |
! | GCCTAACGTAATGCATTTTC+GGG | + | chr5.2:3578458-3578477 | None:intergenic | 40.0% |
! | GGCCTAACGTAATGCATTTT+CGG | + | chr5.2:3578459-3578478 | None:intergenic | 40.0% |
! | TCCATAACTGTTTTGCAGTG+GGG | + | chr5.2:3577984-3578003 | None:intergenic | 40.0% |
! | TCGCCTTGATGATAAGAAAG+GGG | - | chr5.2:3577348-3577367 | MS.gene050369:CDS | 40.0% |
! | TGCATGTGTACTAGCTTCAT+AGG | + | chr5.2:3576881-3576900 | None:intergenic | 40.0% |
! | TGTACTAGCTTCATAGGTTG+TGG | + | chr5.2:3576875-3576894 | None:intergenic | 40.0% |
!! | CAGATGTTGACTCACATCTA+TGG | - | chr5.2:3578589-3578608 | MS.gene050369:CDS | 40.0% |
!! | CCGAGTTCTAAAACACCAAT+TGG | + | chr5.2:3578012-3578031 | None:intergenic | 40.0% |
!! | TAATGCATTTTCGGGAGAAG+TGG | + | chr5.2:3578450-3578469 | None:intergenic | 40.0% |
!! | TAGTAGCTTTGGAATGGCAA+TGG | + | chr5.2:3576448-3576467 | None:intergenic | 40.0% |
!! | TATCGACTCTTGAAACAGGA+CGG | - | chr5.2:3578298-3578317 | MS.gene050369:CDS | 40.0% |
!! | TTTTCTGGTGTGTTTGCAGT+TGG | - | chr5.2:3578657-3578676 | MS.gene050369:CDS | 40.0% |
!!! | ACCCTTTTCACCACTGATTT+GGG | + | chr5.2:3578238-3578257 | None:intergenic | 40.0% |
!!! | CTACCATCCCTTGTTTTCAT+TGG | + | chr5.2:3578060-3578079 | None:intergenic | 40.0% |
!!! | CTGTCTTTGTTTTCAGCACT+TGG | + | chr5.2:3577627-3577646 | None:intergenic | 40.0% |
!!! | GGAGAAGTGGTTTTGAGTAT+AGG | + | chr5.2:3578437-3578456 | None:intergenic | 40.0% |
AACGGAGAAAAACCGTTTCC+CGG | - | chr5.2:3577573-3577592 | MS.gene050369:CDS | 45.0% | |
AAGACAACTGCATCAGCTTG+AGG | + | chr5.2:3576521-3576540 | None:intergenic | 45.0% | |
AAGTTAGGGGTAGATGTGGT+TGG | - | chr5.2:3576236-3576255 | MS.gene050369:CDS | 45.0% | |
AATTCAGCTACGGCTATGTC+TGG | - | chr5.2:3577906-3577925 | MS.gene050369:CDS | 45.0% | |
AGACAACTGCATCAGCTTGA+GGG | + | chr5.2:3576520-3576539 | None:intergenic | 45.0% | |
AGTTCCACCAGATAGTCCTT+TGG | - | chr5.2:3577312-3577331 | MS.gene050369:CDS | 45.0% | |
AGTTGTCTTGCACTATCCGT+TGG | - | chr5.2:3576532-3576551 | MS.gene050369:CDS | 45.0% | |
CACAAATGGATCAAGACTCC+CGG | + | chr5.2:3577095-3577114 | None:intergenic | 45.0% | |
CACCCAATGAAAACAAGGGA+TGG | - | chr5.2:3578054-3578073 | MS.gene050369:CDS | 45.0% | |
CCACTGCAAAACAGTTATGG+AGG | - | chr5.2:3577983-3578002 | MS.gene050369:CDS | 45.0% | |
CCATTCATCATTGAACCCGT+AGG | + | chr5.2:3576698-3576717 | None:intergenic | 45.0% | |
CCATTTGTGGAGGTGAGAAT+CGG | - | chr5.2:3577106-3577125 | MS.gene050369:CDS | 45.0% | |
CCGGGAAAAGATGAGATCAT+TGG | - | chr5.2:3577751-3577770 | MS.gene050369:CDS | 45.0% | |
CCTACGGGTTCAATGATGAA+TGG | - | chr5.2:3576695-3576714 | MS.gene050369:intron | 45.0% | |
CGTATCACTGTTGTAGTAGC+AGG | + | chr5.2:3577481-3577500 | None:intergenic | 45.0% | |
CGTGGCTGGTAGAATACAAA+CGG | - | chr5.2:3579139-3579158 | MS.gene050369:CDS | 45.0% | |
CTACTACCCAAAGATGGAGA+AGG | - | chr5.2:3576269-3576288 | MS.gene050369:CDS | 45.0% | |
CTCAGTTACATCACTACAGC+CGG | - | chr5.2:3576901-3576920 | MS.gene050369:CDS | 45.0% | |
CTGCCACTATGTTTACTGCT+TGG | + | chr5.2:3578515-3578534 | None:intergenic | 45.0% | |
CTTCAGCTGATCAACATCCA+CGG | + | chr5.2:3577866-3577885 | None:intergenic | 45.0% | |
CTTTCGGTTGAAGATCGAGT+TGG | - | chr5.2:3577727-3577746 | MS.gene050369:CDS | 45.0% | |
GAATGCGGTATGATCGTTTG+AGG | - | chr5.2:3579114-3579133 | MS.gene050369:CDS | 45.0% | |
GACTCCACCCAATGAAAACA+AGG | - | chr5.2:3578049-3578068 | MS.gene050369:CDS | 45.0% | |
GAGTCTTGATCCATTTGTGG+AGG | - | chr5.2:3577096-3577115 | MS.gene050369:CDS | 45.0% | |
GATCCATAGAAGGAAGCTCA+TGG | + | chr5.2:3577069-3577088 | None:intergenic | 45.0% | |
GCATATGTCAAGGTGCAGAT+AGG | - | chr5.2:3577598-3577617 | MS.gene050369:CDS | 45.0% | |
GGAAGCCTGTTTCGAAATCT+GGG | + | chr5.2:3579335-3579354 | None:intergenic | 45.0% | |
GTCACAAATGGGTCAGAACA+AGG | - | chr5.2:3578115-3578134 | MS.gene050369:CDS | 45.0% | |
GTGAGAATCGGCAATTACAG+AGG | - | chr5.2:3577118-3577137 | MS.gene050369:CDS | 45.0% | |
GTGAGTATCTGCATATCCAG+TGG | + | chr5.2:3576810-3576829 | None:intergenic | 45.0% | |
GTGTAGGCAAAATCAACTCC+GGG | + | chr5.2:3578767-3578786 | None:intergenic | 45.0% | |
GTTGGGTGAAGAACAAGCAA+TGG | + | chr5.2:3578342-3578361 | None:intergenic | 45.0% | |
TACCGCATTCTTACAAGGTC+AGG | + | chr5.2:3579104-3579123 | None:intergenic | 45.0% | |
TCATCAAGGCGATACCATTC+GGG | + | chr5.2:3577340-3577359 | None:intergenic | 45.0% | |
TCCACCACTTCTTTACGAAG+CGG | + | chr5.2:3578561-3578580 | None:intergenic | 45.0% | |
TGACATATGCATCCGGGAAA+CGG | + | chr5.2:3577588-3577607 | None:intergenic | 45.0% | |
TGCACCTTGACATATGCATC+CGG | + | chr5.2:3577595-3577614 | None:intergenic | 45.0% | |
TGTAGTACACCCCGATGAAA+TGG | - | chr5.2:3579043-3579062 | MS.gene050369:CDS | 45.0% | |
TGTCAAAGACACCTACTGTG+AGG | + | chr5.2:3578212-3578231 | None:intergenic | 45.0% | |
TTGCTTGTTCTTCACCCAAC+TGG | - | chr5.2:3578342-3578361 | MS.gene050369:CDS | 45.0% | |
TTTCCCGGATGCATATGTCA+AGG | - | chr5.2:3577588-3577607 | MS.gene050369:CDS | 45.0% | |
! | AAAATCCCGCGCTTTTCCAA+CGG | + | chr5.2:3576551-3576570 | None:intergenic | 45.0% |
! | AAGAAGTTGATCGGTGCAGA+CGG | + | chr5.2:3579356-3579375 | None:intergenic | 45.0% |
! | ACTCCTTTTCAAATGGTGGC+TGG | - | chr5.2:3579281-3579300 | MS.gene050369:CDS | 45.0% |
! | AGTCGACGGAAGAAGTTGAT+CGG | + | chr5.2:3579365-3579384 | None:intergenic | 45.0% |
! | CCTCCATAACTGTTTTGCAG+TGG | + | chr5.2:3577986-3578005 | None:intergenic | 45.0% |
! | CTTGGTAAAGTTAGCCTCAC+AGG | - | chr5.2:3576482-3576501 | MS.gene050369:CDS | 45.0% |
! | GGGATTTTCTCTCGTGTAAG+AGG | - | chr5.2:3576563-3576582 | MS.gene050369:CDS | 45.0% |
! | TGTGGGTTTAGAGTTCTAGC+AGG | + | chr5.2:3577652-3577671 | None:intergenic | 45.0% |
!! | CGCATATCGACTCTTGAAAC+AGG | - | chr5.2:3578294-3578313 | MS.gene050369:CDS | 45.0% |
!! | GACCCTTTTCACCACTGATT+TGG | + | chr5.2:3578239-3578258 | None:intergenic | 45.0% |
!! | GCCGTTGATGGTTTGTGTTA+GGG | + | chr5.2:3576769-3576788 | None:intergenic | 45.0% |
!! | GGACAAAAGAAGTACCTGTG+AGG | + | chr5.2:3576499-3576518 | None:intergenic | 45.0% |
!! | GTGAGTTGATGCTAGCTGTT+TGG | - | chr5.2:3577383-3577402 | MS.gene050369:CDS | 45.0% |
!! | GTTGATGGTTTGTGTTAGGG+AGG | + | chr5.2:3576766-3576785 | None:intergenic | 45.0% |
!! | TCTCATGTTGGTTTGCTTCC+CGG | - | chr5.2:3578746-3578765 | MS.gene050369:CDS | 45.0% |
!! | TGCCGTTGATGGTTTGTGTT+AGG | + | chr5.2:3576770-3576789 | None:intergenic | 45.0% |
!! | TTCATGTGTGGAGGGTATCT+TGG | + | chr5.2:3579002-3579021 | None:intergenic | 45.0% |
!!! | CATCCCTTGTTTTCATTGGG+TGG | + | chr5.2:3578056-3578075 | None:intergenic | 45.0% |
!!! | CGCCTCATGACAGTTTTTTC+TGG | - | chr5.2:3578642-3578661 | MS.gene050369:CDS | 45.0% |
ACACCCCGATGAAATGGATG+AGG | - | chr5.2:3579049-3579068 | MS.gene050369:CDS | 50.0% | |
ACCACTTCTTTACGAAGCGG+TGG | + | chr5.2:3578558-3578577 | None:intergenic | 50.0% | |
ACCGCTTCGTAAAGAAGTGG+TGG | - | chr5.2:3578557-3578576 | MS.gene050369:CDS | 50.0% | |
ATAGTCCTTTGGCACCCGAA+TGG | - | chr5.2:3577323-3577342 | MS.gene050369:CDS | 50.0% | |
CAAAGGTCTATCATGCTCCG+AGG | - | chr5.2:3577503-3577522 | MS.gene050369:CDS | 50.0% | |
CAACGAGCAATACACTTGGG+AGG | - | chr5.2:3578167-3578186 | MS.gene050369:CDS | 50.0% | |
CACTATCCGTTGGAAAAGCG+CGG | - | chr5.2:3576542-3576561 | MS.gene050369:CDS | 50.0% | |
CAGCATCAACAACACTCCAC+TGG | - | chr5.2:3576791-3576810 | MS.gene050369:intron | 50.0% | |
CAGTAAACATAGTGGCAGCG+CGG | - | chr5.2:3578517-3578536 | MS.gene050369:CDS | 50.0% | |
CAGTTATGGAGGCCACCAAT+TGG | - | chr5.2:3577994-3578013 | MS.gene050369:CDS | 50.0% | |
CAGTTCTTGCAGGAAGTCGA+CGG | + | chr5.2:3579379-3579398 | None:intergenic | 50.0% | |
CCGATTCTCACCTCCACAAA+TGG | + | chr5.2:3577109-3577128 | None:intergenic | 50.0% | |
CGGAAGCCTGTTTCGAAATC+TGG | + | chr5.2:3579336-3579355 | None:intergenic | 50.0% | |
CGGGAGTCTTGATCCATTTG+TGG | - | chr5.2:3577093-3577112 | MS.gene050369:CDS | 50.0% | |
CTCCCGGTAAGATCCATAGA+AGG | + | chr5.2:3577079-3577098 | None:intergenic | 50.0% | |
GAAACAAGTCCGTTTCTCGG+TGG | - | chr5.2:3576941-3576960 | MS.gene050369:CDS | 50.0% | |
GCAAAAACCTGATGCCACTC+AGG | + | chr5.2:3577175-3577194 | None:intergenic | 50.0% | |
GCACCTTGACATATGCATCC+GGG | + | chr5.2:3577594-3577613 | None:intergenic | 50.0% | |
GCCCCACTGCAAAACAGTTA+TGG | - | chr5.2:3577980-3577999 | MS.gene050369:CDS | 50.0% | |
GGATTCATGCACTGTTGAGC+TGG | - | chr5.2:3579192-3579211 | MS.gene050369:CDS | 50.0% | |
GGCATCCCAGATTTCGAAAC+AGG | - | chr5.2:3579327-3579346 | MS.gene050369:CDS | 50.0% | |
GTATGATCGTTTGAGGAGCG+TGG | - | chr5.2:3579121-3579140 | MS.gene050369:CDS | 50.0% | |
GTTGATGCTGATGCCGTTGA+TGG | + | chr5.2:3576781-3576800 | None:intergenic | 50.0% | |
GTTGGCAAGGACTCAACAGA+AGG | + | chr5.2:3576650-3576669 | None:intergenic | 50.0% | |
TCAGAATCCTGAGTGGCATC+AGG | - | chr5.2:3577165-3577184 | MS.gene050369:CDS | 50.0% | |
TCTATCATGCTCCGAGGTTG+TGG | - | chr5.2:3577509-3577528 | MS.gene050369:CDS | 50.0% | |
TCTCGTGTAAGAGGTGAGCT+TGG | - | chr5.2:3576572-3576591 | MS.gene050369:CDS | 50.0% | |
TGATCAACATCCACGGCAAC+AGG | + | chr5.2:3577859-3577878 | None:intergenic | 50.0% | |
! | ACTATCCGTTGGAAAAGCGC+GGG | - | chr5.2:3576543-3576562 | MS.gene050369:CDS | 50.0% |
! | GGGAAACGGTTTTTCTCCGT+TGG | + | chr5.2:3577574-3577593 | None:intergenic | 50.0% |
! | GTAGGTGATTTGGCTAGCCA+GGG | - | chr5.2:3579164-3579183 | MS.gene050369:CDS | 50.0% |
! | TCGAGTTGCATGACTGCGAA+TGG | + | chr5.2:3578480-3578499 | None:intergenic | 50.0% |
! | TGTAGGTGATTTGGCTAGCC+AGG | - | chr5.2:3579163-3579182 | MS.gene050369:CDS | 50.0% |
!! | CAAATGGTGGCTGGTTTAGC+AGG | - | chr5.2:3579290-3579309 | MS.gene050369:CDS | 50.0% |
!! | CTCGGAGTGCTGAATGCAAT+AGG | - | chr5.2:3578027-3578046 | MS.gene050369:CDS | 50.0% |
!! | GGTTGAAGATCGAGTTGGTC+CGG | - | chr5.2:3577732-3577751 | MS.gene050369:CDS | 50.0% |
!! | GTTGAAGATCGAGTTGGTCC+GGG | - | chr5.2:3577733-3577752 | MS.gene050369:CDS | 50.0% |
!! | TGTGTGGAGGGTATCTTGGT+CGG | + | chr5.2:3578998-3579017 | None:intergenic | 50.0% |
ACAAGTCCGTTTCTCGGTGG+AGG | - | chr5.2:3576944-3576963 | MS.gene050369:CDS | 55.0% | |
ACACGGACGTACCACAACCT+CGG | + | chr5.2:3577523-3577542 | None:intergenic | 55.0% | |
ACCCTTCCTCCACCGAGAAA+CGG | + | chr5.2:3576953-3576972 | None:intergenic | 55.0% | |
CAGCTACGGCTATGTCTGGA+TGG | - | chr5.2:3577910-3577929 | MS.gene050369:CDS | 55.0% | |
CGATACCATTCGGGTGCCAA+AGG | + | chr5.2:3577331-3577350 | None:intergenic | 55.0% | |
CTACGGCTATGTCTGGATGG+AGG | - | chr5.2:3577913-3577932 | MS.gene050369:CDS | 55.0% | |
CTTGGAAAAGCCTGTTGCCG+TGG | - | chr5.2:3577846-3577865 | MS.gene050369:CDS | 55.0% | |
GACACCTACTGTGAGGACTG+TGG | + | chr5.2:3578205-3578224 | None:intergenic | 55.0% | |
GCCACCGCTTCGTAAAGAAG+TGG | - | chr5.2:3578554-3578573 | MS.gene050369:CDS | 55.0% | |
GGCCCATGAGCTTCCTTCTA+TGG | - | chr5.2:3577063-3577082 | MS.gene050369:CDS | 55.0% | |
GGTGCCAAAGGACTATCTGG+TGG | + | chr5.2:3577319-3577338 | None:intergenic | 55.0% | |
GTGCATGAATCCTCTCACCC+TGG | + | chr5.2:3579184-3579203 | None:intergenic | 55.0% | |
TACCATACCGCTGAACGCTG+TGG | - | chr5.2:3577780-3577799 | MS.gene050369:CDS | 55.0% | |
TCATTGAACCCGTAGGTCCG+TGG | + | chr5.2:3576691-3576710 | None:intergenic | 55.0% | |
TCCGTTTCTCGGTGGAGGAA+GGG | - | chr5.2:3576949-3576968 | MS.gene050369:CDS | 55.0% | |
TCGGGTGCCAAAGGACTATC+TGG | + | chr5.2:3577322-3577341 | None:intergenic | 55.0% | |
TGCTGAAGTCCACGGACCTA+CGG | - | chr5.2:3576679-3576698 | MS.gene050369:intron | 55.0% | |
TTCGGATGCAGCTTCACCTG+TGG | - | chr5.2:3577447-3577466 | MS.gene050369:CDS | 55.0% | |
! | ATTTGGCTAGCCAGGGTGAG+AGG | - | chr5.2:3579171-3579190 | MS.gene050369:CDS | 55.0% |
AACATAGTGGCAGCGCGGCT+CGG | - | chr5.2:3578522-3578541 | MS.gene050369:CDS | 60.0% | |
ATGGAGCATGCGCCGTAGCA+AGG | - | chr5.2:3578608-3578627 | MS.gene050369:CDS | 60.0% | |
CCTACTGTGAGGACTGTGGC+AGG | + | chr5.2:3578201-3578220 | None:intergenic | 60.0% | |
CCTGCCACAGTCCTCACAGT+AGG | - | chr5.2:3578198-3578217 | MS.gene050369:CDS | 60.0% | |
CTCCACAGCGTTCAGCGGTA+TGG | + | chr5.2:3577785-3577804 | None:intergenic | 60.0% | |
CTCGGTGGAGGAAGGGTTGT+TGG | - | chr5.2:3576956-3576975 | MS.gene050369:CDS | 60.0% | |
GCTGAAGTCCACGGACCTAC+GGG | - | chr5.2:3576680-3576699 | MS.gene050369:intron | 60.0% | |
GGTGGAGGAAGGGTTGTTGG+CGG | - | chr5.2:3576959-3576978 | MS.gene050369:CDS | 60.0% | |
GTCCGTTTCTCGGTGGAGGA+AGG | - | chr5.2:3576948-3576967 | MS.gene050369:CDS | 60.0% | |
TACCGCTGAACGCTGTGGAG+AGG | - | chr5.2:3577785-3577804 | MS.gene050369:CDS | 60.0% | |
! | GATCGTTTGAGGAGCGTGGC+TGG | - | chr5.2:3579125-3579144 | MS.gene050369:CDS | 60.0% |
CGCCTCTCCACAGCGTTCAG+CGG | + | chr5.2:3577790-3577809 | None:intergenic | 65.0% | |
GTAGCAGGCGTGCTGTCCAC+AGG | + | chr5.2:3577466-3577485 | None:intergenic | 65.0% | |
! | GAACGCTGTGGAGAGGCGTG+CGG | - | chr5.2:3577792-3577811 | MS.gene050369:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 3576224 | 3579412 | 3576224 | ID=MS.gene050369 |
chr5.2 | mRNA | 3576224 | 3579412 | 3576224 | ID=MS.gene050369.t1;Parent=MS.gene050369 |
chr5.2 | exon | 3576810 | 3579412 | 3576810 | ID=MS.gene050369.t1.exon1;Parent=MS.gene050369.t1 |
chr5.2 | CDS | 3576810 | 3579412 | 3576810 | ID=cds.MS.gene050369.t1;Parent=MS.gene050369.t1 |
chr5.2 | exon | 3576224 | 3576644 | 3576224 | ID=MS.gene050369.t1.exon2;Parent=MS.gene050369.t1 |
chr5.2 | CDS | 3576224 | 3576644 | 3576224 | ID=cds.MS.gene050369.t1;Parent=MS.gene050369.t1 |
Gene Sequence |
Protein sequence |