Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96713.t1 | XP_013459353.1 | 98 | 392 | 7 | 1 | 1 | 392 | 1 | 391 | 6.90E-219 | 769.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96713.t1 | P93841 | 75.0 | 380 | 93 | 1 | 6 | 383 | 8 | 387 | 3.6e-168 | 592.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96713.t1 | A0A072UU85 | 98.0 | 392 | 7 | 1 | 1 | 392 | 1 | 391 | 5.0e-219 | 769.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049427 | MS.gene96713 | 0.819997 | 8.66E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene96713 | 0.803502 | 3.38E-49 | -1.69E-46 |
| MS.gene055412 | MS.gene96713 | 0.826733 | 2.31E-54 | -1.69E-46 |
| MS.gene056897 | MS.gene96713 | 0.819614 | 1.06E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene96713 | 0.807638 | 4.58E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96713.t1 | MTR_3g437340 | 97.959 | 392 | 7 | 1 | 1 | 392 | 1 | 391 | 0.0 | 788 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96713.t1 | AT2G26930 | 79.279 | 333 | 69 | 0 | 54 | 386 | 42 | 374 | 0.0 | 560 |
Find 119 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGATTCATTTGGATAAA+AGG | 0.121284 | 3.3:+26875687 | MS.gene96713:intron |
| GTGAAGCTTTGGATGAAAAT+TGG | 0.210791 | 3.3:-26873003 | None:intergenic |
| TTAAGGCGCTTAATCTTTAC+AGG | 0.263692 | 3.3:+26875525 | MS.gene96713:CDS |
| CGGGCACTGAAAAGTTCTTT+TGG | 0.268514 | 3.3:+26875555 | MS.gene96713:CDS |
| GCAATGCTGCAACTGCATTA+TGG | 0.274231 | 3.3:+26875744 | MS.gene96713:CDS |
| CCAACTGGGGCAGGGCTTGG+TGG | 0.276221 | 3.3:+26875713 | MS.gene96713:CDS |
| GATGTTTGCATTAATGATTT+AGG | 0.283211 | 3.3:+26876613 | MS.gene96713:CDS |
| CTCTTCCAGAAAACAATTAG+AGG | 0.286586 | 3.3:+26873070 | MS.gene96713:CDS |
| GTTCCAACTGGGGCAGGGCT+TGG | 0.296992 | 3.3:+26875710 | MS.gene96713:CDS |
| TGCCTCTCTAGTGAGAAAAT+TGG | 0.299369 | 3.3:-26877829 | None:intergenic |
| GTGATTAACTTACATGAAAC+AGG | 0.300913 | 3.3:-26874759 | None:intergenic |
| CAATCTCACTTGACCATTCC+TGG | 0.306728 | 3.3:-26875811 | None:intergenic |
| CAATGCTGCAACTGCATTAT+GGG | 0.341992 | 3.3:+26875745 | MS.gene96713:CDS |
| TTGGTCTGAATTGAGGTAAA+TGG | 0.355433 | 3.3:-26872971 | None:intergenic |
| GAACAAAGTAAGCCTTGAAA+TGG | 0.355469 | 3.3:-26874587 | None:intergenic |
| CCCTCTTGTTGGTTATTCTC+AGG | 0.358444 | 3.3:-26874711 | None:intergenic |
| GGAAGCACAATTGTTGGAAT+TGG | 0.361037 | 3.3:+26877448 | MS.gene96713:CDS |
| ACTGGGGCAGGGCTTGGTGG+TGG | 0.371790 | 3.3:+26875716 | MS.gene96713:CDS |
| GGTTCTCATAAAACCTCAAC+AGG | 0.389815 | 3.3:+26876401 | MS.gene96713:CDS |
| AAAAGGGTTCCAACTGGGGC+AGG | 0.395258 | 3.3:+26875704 | MS.gene96713:CDS |
| TGTATGTTCTCAGATTCATT+TGG | 0.395758 | 3.3:+26875679 | MS.gene96713:intron |
| TGGAGTTCTTTCTCCGTGGC+AGG | 0.403243 | 3.3:-26875791 | None:intergenic |
| TGTCGACCCTTCAATATTGC+TGG | 0.404170 | 3.3:+26876561 | MS.gene96713:CDS |
| GGAAGACGGGTATCATGATT+TGG | 0.405148 | 3.3:+26874732 | MS.gene96713:CDS |
| CAGGAATGGTCAAGTGAGAT+TGG | 0.412432 | 3.3:+26875812 | MS.gene96713:CDS |
| TGAAAATTGGAAGACCCATT+TGG | 0.416730 | 3.3:-26872990 | None:intergenic |
| AATAATTGGTTTACCTTGCA+AGG | 0.418347 | 3.3:-26874613 | None:intergenic |
| TCAGATTCATTTGGATAAAA+GGG | 0.420419 | 3.3:+26875688 | MS.gene96713:intron |
| ATACCCGTCTTCCCTCTTGT+TGG | 0.422369 | 3.3:-26874722 | None:intergenic |
| AGCTTGTTTATCCTTTCATC+AGG | 0.425534 | 3.3:-26874538 | None:intergenic |
| GGTCTATGAAAGTGAAGCTT+TGG | 0.431944 | 3.3:-26873014 | None:intergenic |
| ATAAGGAGGCTCCCATTTCA+AGG | 0.436768 | 3.3:+26874575 | MS.gene96713:CDS |
| TTGGATAAAAGGGTTCCAAC+TGG | 0.440000 | 3.3:+26875698 | MS.gene96713:CDS |
| ATCTAATGATACAGCGTCTA+CGG | 0.440171 | 3.3:+26876521 | MS.gene96713:intron |
| GCCTTGTCCACCAATGTGTC+CGG | 0.443451 | 3.3:+26875377 | MS.gene96713:CDS |
| TTACCTCAATTCAGACCAAA+TGG | 0.443933 | 3.3:+26872975 | MS.gene96713:CDS |
| ACCTCTTGACGATAGGAATC+TGG | 0.444574 | 3.3:+26875403 | MS.gene96713:CDS |
| TAAATGAATTGTGGAGGATC+AGG | 0.455794 | 3.3:-26877475 | None:intergenic |
| CTCGCCTCGACCAGTGCAAT+AGG | 0.456777 | 3.3:-26875870 | None:intergenic |
| TACTTTGTTCTCTCCTTGCA+AGG | 0.464170 | 3.3:+26874600 | MS.gene96713:CDS |
| TGCAGCGGAAGCACAATTGT+TGG | 0.467813 | 3.3:+26877442 | MS.gene96713:intron |
| TATGATGCTGTCTTTATGTC+AGG | 0.470938 | 3.3:+26877045 | MS.gene96713:CDS |
| AAGGGTCGACATTACTAGTC+TGG | 0.474461 | 3.3:-26876549 | None:intergenic |
| ATTGGTGGACAAGGCATCCT+TGG | 0.478362 | 3.3:-26875369 | None:intergenic |
| GTTTCAGTCGTTTGAGAGAA+GGG | 0.480550 | 3.3:-26876993 | None:intergenic |
| GACCCATTTGGTCTGAATTG+AGG | 0.481688 | 3.3:-26872978 | None:intergenic |
| CGAATTACAGCAGCTGGTCG+TGG | 0.485929 | 3.3:+26877018 | MS.gene96713:CDS |
| ATCCTCTCCAGCAATATTGA+AGG | 0.488811 | 3.3:-26876568 | None:intergenic |
| GCTAGCTGATCAAATTGATA+AGG | 0.491164 | 3.3:+26874558 | MS.gene96713:CDS |
| TACCGAGACGTATTCTTGTC+AGG | 0.495195 | 3.3:+26877511 | MS.gene96713:CDS |
| AAGGTGACAAAGAGAACTTA+AGG | 0.498041 | 3.3:-26875340 | None:intergenic |
| TGGATAAAAGGGTTCCAACT+GGG | 0.499633 | 3.3:+26875699 | MS.gene96713:CDS |
| AAGGCATCCTTGGTATTTGA+AGG | 0.502198 | 3.3:-26875359 | None:intergenic |
| TGCCACGGAGAAAGAACTCC+AGG | 0.503166 | 3.3:+26875793 | MS.gene96713:CDS |
| AATGATACAGCGTCTACGGC+TGG | 0.507265 | 3.3:+26876525 | MS.gene96713:intron |
| GTTATCATTTGCAGAACCTC+CGG | 0.511513 | 3.3:+26876957 | MS.gene96713:intron |
| TGTTTCAGTCGTTTGAGAGA+AGG | 0.518235 | 3.3:-26876994 | None:intergenic |
| AACAAAGTAAGCCTTGAAAT+GGG | 0.519272 | 3.3:-26874586 | None:intergenic |
| GCAGCCTATTGCACTGGTCG+AGG | 0.528989 | 3.3:+26875866 | MS.gene96713:CDS |
| ATGGATGGTTCTTCTGAAAG+TGG | 0.529200 | 3.3:-26872952 | None:intergenic |
| TGGATGGTTCTTCTGAAAGT+GGG | 0.532145 | 3.3:-26872951 | None:intergenic |
| AACGGTGCAGCCTATTGCAC+TGG | 0.532541 | 3.3:+26875860 | MS.gene96713:CDS |
| CCACCAAGCCCTGCCCCAGT+TGG | 0.534086 | 3.3:-26875713 | None:intergenic |
| AAACAGCGAATTACAGCAGC+TGG | 0.534386 | 3.3:+26877012 | MS.gene96713:CDS |
| TACCTCAATTCAGACCAAAT+GGG | 0.535582 | 3.3:+26872976 | MS.gene96713:CDS |
| TTGCTGGAGAGGATTTCAAC+GGG | 0.546693 | 3.3:+26876577 | MS.gene96713:CDS |
| AGGTACGCCGGACACATTGG+TGG | 0.547935 | 3.3:-26875384 | None:intergenic |
| GAAATAAATGACTCAGAGGT+AGG | 0.550781 | 3.3:-26877882 | None:intergenic |
| TTCTGAAAGTGGGGATAGAG+TGG | 0.551464 | 3.3:-26872941 | None:intergenic |
| GAATATCCGAAGATACTAGC+GGG | 0.551637 | 3.3:-26876374 | None:intergenic |
| AACCTTAAGGTGATAAGTCT+AGG | 0.556822 | 3.3:+26875311 | MS.gene96713:intron |
| GCCGGACACATTGGTGGACA+AGG | 0.557132 | 3.3:-26875378 | None:intergenic |
| TCATCATCGTAAATGAATTG+TGG | 0.563101 | 3.3:-26877484 | None:intergenic |
| ACCCTTCAATATTGCTGGAG+AGG | 0.564664 | 3.3:+26876566 | MS.gene96713:CDS |
| TAATCTTTACAGGAAGAAGA+CGG | 0.565856 | 3.3:+26875535 | MS.gene96713:CDS |
| ATAACCAACAAGAGGGAAGA+CGG | 0.568717 | 3.3:+26874718 | MS.gene96713:CDS |
| TTCAACTGCAGAAGTCTACA+AGG | 0.572084 | 3.3:+26876428 | MS.gene96713:CDS |
| AAAGGGTTCCAACTGGGGCA+GGG | 0.575421 | 3.3:+26875705 | MS.gene96713:CDS |
| ATTCAGTGGTTGTCCTGCCA+CGG | 0.576663 | 3.3:+26875778 | MS.gene96713:CDS |
| AAGAGGTACGCCGGACACAT+TGG | 0.577117 | 3.3:-26875387 | None:intergenic |
| TAACCAACAAGAGGGAAGAC+GGG | 0.586466 | 3.3:+26874719 | MS.gene96713:CDS |
| CCGGCGTACCTCTTGACGAT+AGG | 0.587645 | 3.3:+26875396 | MS.gene96713:CDS |
| ACAATTCATTTACGATGATG+AGG | 0.587793 | 3.3:+26877486 | MS.gene96713:CDS |
| GTTTGTCAAAGTCAAAGCCA+TGG | 0.589156 | 3.3:+26873040 | MS.gene96713:CDS |
| CGGAGAAAGAACTCCAGGAA+TGG | 0.589868 | 3.3:+26875798 | MS.gene96713:CDS |
| AGCTGATCAAATTGATAAGG+AGG | 0.590553 | 3.3:+26874561 | MS.gene96713:CDS |
| TCTGGAAGAGTCAGAAACCA+TGG | 0.590890 | 3.3:-26873057 | None:intergenic |
| TCCTGAGAATAACCAACAAG+AGG | 0.592621 | 3.3:+26874710 | MS.gene96713:CDS |
| AGTATCTTCGGATATTCCAA+TGG | 0.593726 | 3.3:+26876380 | MS.gene96713:CDS |
| GGATAAAAGGGTTCCAACTG+GGG | 0.594768 | 3.3:+26875700 | MS.gene96713:CDS |
| CCTGAGAATAACCAACAAGA+GGG | 0.595343 | 3.3:+26874711 | MS.gene96713:CDS |
| AATCTTTACAGGAAGAAGAC+GGG | 0.596753 | 3.3:+26875536 | MS.gene96713:CDS |
| GCTTTGACTTTGACAAACTG+AGG | 0.596833 | 3.3:-26873035 | None:intergenic |
| TCAGAGGTAGGAGTTGAAGC+AGG | 0.604315 | 3.3:-26877870 | None:intergenic |
| TTTGTCACCTTCAAATACCA+AGG | 0.608885 | 3.3:+26875352 | MS.gene96713:CDS |
| AAGAAACTGAGAAGAAGCCA+TGG | 0.611350 | 3.3:-26872910 | None:intergenic |
| GCAGTTGAACAAGCCTGTTG+AGG | 0.611379 | 3.3:-26876414 | None:intergenic |
| TCGTGTATGATCCTGATGAA+AGG | 0.615450 | 3.3:+26874527 | MS.gene96713:CDS |
| ACCAGATTCCTATCGTCAAG+AGG | 0.617737 | 3.3:-26875404 | None:intergenic |
| ATTGCTGGAGAGGATTTCAA+CGG | 0.619536 | 3.3:+26876576 | MS.gene96713:CDS |
| TCCTCTCCAGCAATATTGAA+GGG | 0.622612 | 3.3:-26876567 | None:intergenic |
| ATGCTGTCTTTATGTCAGGA+AGG | 0.626781 | 3.3:+26877049 | MS.gene96713:CDS |
| GAAGGGAGAACTTCAAACGC+CGG | 0.627869 | 3.3:-26876976 | None:intergenic |
| TGGGCAGCAAATCAATTCAG+TGG | 0.635251 | 3.3:+26875764 | MS.gene96713:CDS |
| TTCAGAAATAAATGACTCAG+AGG | 0.636755 | 3.3:-26877886 | None:intergenic |
| TTCCTGGAGTTCTTTCTCCG+TGG | 0.642458 | 3.3:-26875795 | None:intergenic |
| GGATGGTTCTTCTGAAAGTG+GGG | 0.644147 | 3.3:-26872950 | None:intergenic |
| TCATCGTAAATGAATTGTGG+AGG | 0.645589 | 3.3:-26877481 | None:intergenic |
| GACCTGACAAGAATACGTCT+CGG | 0.646538 | 3.3:-26877513 | None:intergenic |
| TGATTAACTTACATGAAACA+GGG | 0.656638 | 3.3:-26874758 | None:intergenic |
| CTATTGCACTGGTCGAGGCG+AGG | 0.657650 | 3.3:+26875871 | MS.gene96713:CDS |
| CTGGAGAGGATTTCAACGGG+TGG | 0.659780 | 3.3:+26876580 | MS.gene96713:CDS |
| CCTATCGTCAAGAGGTACGC+CGG | 0.662530 | 3.3:-26875396 | None:intergenic |
| TCACTAGAGAGGCAAATGAG+TGG | 0.688683 | 3.3:+26877838 | MS.gene96713:CDS |
| GGAATATCCGAAGATACTAG+CGG | 0.697348 | 3.3:-26876375 | None:intergenic |
| AATATCCGAAGATACTAGCG+GGG | 0.703814 | 3.3:-26876373 | None:intergenic |
| GGGAGAACTTCAAACGCCGG+AGG | 0.707690 | 3.3:-26876973 | None:intergenic |
| TCTGAATTGAGGTAAATGGA+TGG | 0.708929 | 3.3:-26872967 | None:intergenic |
| ATATCCGAAGATACTAGCGG+GGG | 0.775643 | 3.3:-26876372 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAATAAAAAATTA+AGG | - | chr3.3:26876082-26876101 | None:intergenic | 0.0% |
| !!! | TTAATTTTTTATTTTTTTTT+AGG | + | chr3.3:26876081-26876100 | MS.gene96713:intron | 0.0% |
| !!! | TGATTTTTTGAAATTATTAA+CGG | + | chr3.3:26873424-26873443 | MS.gene96713:intron | 10.0% |
| !! | AAGGTAAAGTTATTTATATT+TGG | + | chr3.3:26873817-26873836 | MS.gene96713:intron | 15.0% |
| !! | ACAAGATATTGAAAAATATT+AGG | - | chr3.3:26877094-26877113 | None:intergenic | 15.0% |
| !! | ATGATAAAATAATTTCCTTT+GGG | + | chr3.3:26877633-26877652 | MS.gene96713:intron | 15.0% |
| !! | GCTTAAATATTTAATTATGA+AGG | + | chr3.3:26876132-26876151 | MS.gene96713:intron | 15.0% |
| !! | TTCAGTAAAAAAAAAAGAAA+AGG | - | chr3.3:26877745-26877764 | None:intergenic | 15.0% |
| !!! | TTTGTACATTTTTTTTTTGA+GGG | + | chr3.3:26875199-26875218 | MS.gene96713:intron | 15.0% |
| !! | AATGTAAAATGATTTATGCT+CGG | - | chr3.3:26874376-26874395 | None:intergenic | 20.0% |
| !! | AATTGCATCTTTATATTACT+TGG | + | chr3.3:26875632-26875651 | MS.gene96713:intron | 20.0% |
| !! | ACATAAGATGATAAACTTTA+GGG | - | chr3.3:26877401-26877420 | None:intergenic | 20.0% |
| !! | CATGATAAAATAATTTCCTT+TGG | + | chr3.3:26877632-26877651 | MS.gene96713:intron | 20.0% |
| !! | TAACTTAGAATCAATTCTAT+AGG | - | chr3.3:26874291-26874310 | None:intergenic | 20.0% |
| !! | TAAGTTAGAATTAATTCTGA+AGG | + | chr3.3:26873927-26873946 | MS.gene96713:intron | 20.0% |
| !! | TACATAAGATGATAAACTTT+AGG | - | chr3.3:26877402-26877421 | None:intergenic | 20.0% |
| !!! | AAAGTGATTTTGGTATATTT+TGG | + | chr3.3:26874258-26874277 | MS.gene96713:intron | 20.0% |
| !!! | AAGTGATTTTGGTATATTTT+GGG | + | chr3.3:26874259-26874278 | MS.gene96713:intron | 20.0% |
| !!! | AATATACCAAAATCACTTTT+TGG | - | chr3.3:26874257-26874276 | None:intergenic | 20.0% |
| !!! | CTTTGTACATTTTTTTTTTG+AGG | + | chr3.3:26875198-26875217 | MS.gene96713:intron | 20.0% |
| !!! | TAATCAATTTTACATGTGTT+TGG | + | chr3.3:26873972-26873991 | MS.gene96713:intron | 20.0% |
| !!! | TAGATATATTCATTTTGTCT+TGG | - | chr3.3:26876194-26876213 | None:intergenic | 20.0% |
| !!! | TCTAACTTAAATTCACTTTT+GGG | + | chr3.3:26874227-26874246 | MS.gene96713:intron | 20.0% |
| !!! | TCTACATAATATTAAGTTGA+AGG | + | chr3.3:26873798-26873817 | MS.gene96713:intron | 20.0% |
| !!! | TCTCTTTTTACAGATTATTA+AGG | + | chr3.3:26875508-26875527 | MS.gene96713:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | chr3.3:26873272-26873291 | MS.gene96713:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+TGG | + | chr3.3:26873272-26873291 | MS.gene96713:intron | 20.0% |
| ! | AAGTTAACAATGTCAATGAT+AGG | - | chr3.3:26876861-26876880 | None:intergenic | 25.0% |
| ! | AGTCATCAAAATTACAAATC+AGG | + | chr3.3:26874881-26874900 | MS.gene96713:intron | 25.0% |
| ! | CATAAGATGATAAACTTTAG+GGG | - | chr3.3:26877400-26877419 | None:intergenic | 25.0% |
| ! | CATGTAAGTTAATCACAATT+TGG | + | chr3.3:26874766-26874785 | MS.gene96713:intron | 25.0% |
| ! | CTATCCATGATAAAAATTCT+GGG | - | chr3.3:26876042-26876061 | None:intergenic | 25.0% |
| ! | CTGAAGTTATTTACTTTACA+TGG | + | chr3.3:26877760-26877779 | MS.gene96713:intron | 25.0% |
| ! | GAATTAGAACTACGATATAA+AGG | - | chr3.3:26877226-26877245 | None:intergenic | 25.0% |
| ! | GATGTTTGCATTAATGATTT+AGG | + | chr3.3:26876613-26876632 | MS.gene96713:CDS | 25.0% |
| ! | TAACTAAATTCAATTCCCAA+AGG | - | chr3.3:26877651-26877670 | None:intergenic | 25.0% |
| ! | TAATATTTACTTTGCTCTCA+TGG | + | chr3.3:26877350-26877369 | MS.gene96713:intron | 25.0% |
| ! | TAGCATTTGTTTAACTGAAT+TGG | + | chr3.3:26873158-26873177 | MS.gene96713:intron | 25.0% |
| ! | TCACAATTTGGTAAATTCTT+CGG | + | chr3.3:26874778-26874797 | MS.gene96713:intron | 25.0% |
| ! | TCAGATTCATTTGGATAAAA+GGG | + | chr3.3:26875688-26875707 | MS.gene96713:intron | 25.0% |
| ! | TCTGCAATTGGAAATATTAA+AGG | - | chr3.3:26877807-26877826 | None:intergenic | 25.0% |
| ! | TGATTAACTTACATGAAACA+GGG | - | chr3.3:26874761-26874780 | None:intergenic | 25.0% |
| ! | TTAGTCCAACAAAAAATTTG+TGG | - | chr3.3:26875239-26875258 | None:intergenic | 25.0% |
| !! | AAACCAATTATTCTTTTGCT+TGG | + | chr3.3:26874624-26874643 | MS.gene96713:intron | 25.0% |
| !! | AACCAATTATTCTTTTGCTT+GGG | + | chr3.3:26874625-26874644 | MS.gene96713:intron | 25.0% |
| !! | AATTTTTATCATGGATAGGA+AGG | + | chr3.3:26876044-26876063 | MS.gene96713:intron | 25.0% |
| !! | AGAATTGATTCTAACATGTT+TGG | + | chr3.3:26874028-26874047 | MS.gene96713:intron | 25.0% |
| !! | ATTTTTATCATGGATAGGAA+GGG | + | chr3.3:26876045-26876064 | MS.gene96713:intron | 25.0% |
| !! | GTCTAACTTAAATTCACTTT+TGG | + | chr3.3:26874226-26874245 | MS.gene96713:intron | 25.0% |
| !! | TTTGAAATTATTAACGGTGT+TGG | + | chr3.3:26873430-26873449 | MS.gene96713:intron | 25.0% |
| !!! | AACAGTGCTATTATTTTCTT+CGG | + | chr3.3:26875586-26875605 | MS.gene96713:intron | 25.0% |
| !!! | AGTGATTTTGGTATATTTTG+GGG | + | chr3.3:26874260-26874279 | MS.gene96713:intron | 25.0% |
| !!! | CTTTATTTTTTCACTTTCAC+TGG | + | chr3.3:26876670-26876689 | MS.gene96713:intron | 25.0% |
| !!! | TAAACCTCTAGAATCAATTT+TGG | - | chr3.3:26874009-26874028 | None:intergenic | 25.0% |
| !!! | TTTTGTGACTTTAAAGAATG+TGG | - | chr3.3:26876493-26876512 | None:intergenic | 25.0% |
| AACAAAGTAAGCCTTGAAAT+GGG | - | chr3.3:26874589-26874608 | None:intergenic | 30.0% | |
| AACTCCAGTATTCAAAGAAT+GGG | - | chr3.3:26877128-26877147 | None:intergenic | 30.0% | |
| ACAATTCATTTACGATGATG+AGG | + | chr3.3:26877486-26877505 | MS.gene96713:CDS | 30.0% | |
| ACCAAAAATTTAAACACCGA+AGG | - | chr3.3:26874934-26874953 | None:intergenic | 30.0% | |
| ACGAAGATTAAGTTTACTGA+AGG | + | chr3.3:26877266-26877285 | MS.gene96713:intron | 30.0% | |
| AGTAAATATTAAACGACGCT+CGG | - | chr3.3:26877341-26877360 | None:intergenic | 30.0% | |
| AGTTTGAAAACTTGAATCAG+AGG | - | chr3.3:26873494-26873513 | None:intergenic | 30.0% | |
| ATGTACAAAGTAGTGACTAA+TGG | - | chr3.3:26875188-26875207 | None:intergenic | 30.0% | |
| CCTATCCATGATAAAAATTC+TGG | - | chr3.3:26876043-26876062 | None:intergenic | 30.0% | |
| CTCAGATTCATTTGGATAAA+AGG | + | chr3.3:26875687-26875706 | MS.gene96713:intron | 30.0% | |
| GCAGGAATTAGAAATATCAA+AGG | + | chr3.3:26875936-26875955 | MS.gene96713:intron | 30.0% | |
| GTGATTAACTTACATGAAAC+AGG | - | chr3.3:26874762-26874781 | None:intergenic | 30.0% | |
| TAACTCCAGTATTCAAAGAA+TGG | - | chr3.3:26877129-26877148 | None:intergenic | 30.0% | |
| TAATCTTTACAGGAAGAAGA+CGG | + | chr3.3:26875535-26875554 | MS.gene96713:CDS | 30.0% | |
| TACTGAGTTCGACATTATAA+AGG | - | chr3.3:26874836-26874855 | None:intergenic | 30.0% | |
| TCATCATCGTAAATGAATTG+TGG | - | chr3.3:26877487-26877506 | None:intergenic | 30.0% | |
| TGTATGTTCTCAGATTCATT+TGG | + | chr3.3:26875679-26875698 | MS.gene96713:intron | 30.0% | |
| TGTCTTCTAGTATTATCCAT+AGG | - | chr3.3:26876019-26876038 | None:intergenic | 30.0% | |
| TTCAGAAATAAATGACTCAG+AGG | - | chr3.3:26877889-26877908 | None:intergenic | 30.0% | |
| TTCAGTGTAATTGTATGTGT+CGG | - | chr3.3:26873247-26873266 | None:intergenic | 30.0% | |
| ! | AATAATTGGTTTACCTTGCA+AGG | - | chr3.3:26874616-26874635 | None:intergenic | 30.0% |
| ! | ACAAACCTCTAATTGTTTTC+TGG | - | chr3.3:26873078-26873097 | None:intergenic | 30.0% |
| ! | CCAGAATTTTTATCATGGAT+AGG | + | chr3.3:26876040-26876059 | MS.gene96713:intron | 30.0% |
| ! | CTCAAAATCAATTTTCCTCA+CGG | - | chr3.3:26873369-26873388 | None:intergenic | 30.0% |
| ! | TACAAGGTATCTGAATTTCA+AGG | + | chr3.3:26876444-26876463 | MS.gene96713:intron | 30.0% |
| ! | TCAAGTTTTCAAACTTTCAG+TGG | + | chr3.3:26873138-26873157 | MS.gene96713:intron | 30.0% |
| ! | TTTTCGACATTATCTTCTAC+TGG | + | chr3.3:26875452-26875471 | MS.gene96713:intron | 30.0% |
| !! | ATTGATTTGAAAGACGTGAA+GGG | - | chr3.3:26876834-26876853 | None:intergenic | 30.0% |
| !! | CGTAGTTCTAATTCTGTTAA+AGG | + | chr3.3:26877232-26877251 | MS.gene96713:intron | 30.0% |
| !! | TAACTTGTTTAACCTAATGC+AGG | + | chr3.3:26876262-26876281 | MS.gene96713:intron | 30.0% |
| !!! | ACATGTGTTTGGTTTTAGAT+GGG | + | chr3.3:26873983-26874002 | MS.gene96713:intron | 30.0% |
| !!! | CGGTGTTTAAATTTTTGGTA+CGG | + | chr3.3:26874935-26874954 | MS.gene96713:intron | 30.0% |
| !!! | TACATGTGTTTGGTTTTAGA+TGG | + | chr3.3:26873982-26874001 | MS.gene96713:intron | 30.0% |
| AAAACATAAGAAACGAGAGG+AGG | - | chr3.3:26873114-26873133 | None:intergenic | 35.0% | |
| AAACATAAGAAACGAGAGGA+GGG | - | chr3.3:26873113-26873132 | None:intergenic | 35.0% | |
| AAAGGATGGTACCTAGTATT+TGG | - | chr3.3:26875902-26875921 | None:intergenic | 35.0% | |
| AACCTTAAGGTGATAAGTCT+AGG | + | chr3.3:26875311-26875330 | MS.gene96713:intron | 35.0% | |
| AACTTTCAGTGGCATTTGTT+TGG | + | chr3.3:26873510-26873529 | MS.gene96713:intron | 35.0% | |
| AAGGTGACAAAGAGAACTTA+AGG | - | chr3.3:26875343-26875362 | None:intergenic | 35.0% | |
| AATCCGATTTCAAGAAAGGA+TGG | - | chr3.3:26875916-26875935 | None:intergenic | 35.0% | |
| AATCTTTACAGGAAGAAGAC+GGG | + | chr3.3:26875536-26875555 | MS.gene96713:CDS | 35.0% | |
| ACTCCAGTATTCAAAGAATG+GGG | - | chr3.3:26877127-26877146 | None:intergenic | 35.0% | |
| AGAAAATTGGCATCTGCAAT+TGG | - | chr3.3:26877819-26877838 | None:intergenic | 35.0% | |
| AGCTGATCAAATTGATAAGG+AGG | + | chr3.3:26874561-26874580 | MS.gene96713:CDS | 35.0% | |
| AGTATCTTCGGATATTCCAA+TGG | + | chr3.3:26876380-26876399 | MS.gene96713:CDS | 35.0% | |
| ATCTAATGATACAGCGTCTA+CGG | + | chr3.3:26876521-26876540 | MS.gene96713:intron | 35.0% | |
| ATTGCATGTGCTACATATCA+TGG | + | chr3.3:26876794-26876813 | MS.gene96713:intron | 35.0% | |
| CATGCATACCACAATGTTAA+TGG | - | chr3.3:26874455-26874474 | None:intergenic | 35.0% | |
| CCATAGAACCATTAACATTG+TGG | + | chr3.3:26874444-26874463 | MS.gene96713:intron | 35.0% | |
| CTCCCAAGCAAAAGAATAAT+TGG | - | chr3.3:26874630-26874649 | None:intergenic | 35.0% | |
| CTCTTCCAGAAAACAATTAG+AGG | + | chr3.3:26873070-26873089 | MS.gene96713:CDS | 35.0% | |
| CTTCTAGTATTATCCATAGG+AGG | - | chr3.3:26876016-26876035 | None:intergenic | 35.0% | |
| GAAATAAATGACTCAGAGGT+AGG | - | chr3.3:26877885-26877904 | None:intergenic | 35.0% | |
| GAACAAAGTAAGCCTTGAAA+TGG | - | chr3.3:26874590-26874609 | None:intergenic | 35.0% | |
| GAGATGAAATTTACCAGTAG+CGG | + | chr3.3:26877158-26877177 | MS.gene96713:intron | 35.0% | |
| GCTAGCTGATCAAATTGATA+AGG | + | chr3.3:26874558-26874577 | MS.gene96713:CDS | 35.0% | |
| GTACCATCCTTTCTTGAAAT+CGG | + | chr3.3:26875910-26875929 | MS.gene96713:intron | 35.0% | |
| GTGAGATATGTACTGAGATT+AGG | - | chr3.3:26877586-26877605 | None:intergenic | 35.0% | |
| TAAATGAATTGTGGAGGATC+AGG | - | chr3.3:26877478-26877497 | None:intergenic | 35.0% | |
| TACCTCAATTCAGACCAAAT+GGG | + | chr3.3:26872976-26872995 | MS.gene96713:CDS | 35.0% | |
| TATGATGCTGTCTTTATGTC+AGG | + | chr3.3:26877045-26877064 | MS.gene96713:CDS | 35.0% | |
| TCAGTTGAATAGACCTTTCA+CGG | + | chr3.3:26875114-26875133 | MS.gene96713:intron | 35.0% | |
| TCATCGTAAATGAATTGTGG+AGG | - | chr3.3:26877484-26877503 | None:intergenic | 35.0% | |
| TCCAAAACATAAGAAACGAG+AGG | - | chr3.3:26873117-26873136 | None:intergenic | 35.0% | |
| TCTGAATTGAGGTAAATGGA+TGG | - | chr3.3:26872970-26872989 | None:intergenic | 35.0% | |
| TCTTAACATGTATCATGCAG+CGG | + | chr3.3:26877427-26877446 | MS.gene96713:intron | 35.0% | |
| TGAAAATTGGAAGACCCATT+TGG | - | chr3.3:26872993-26873012 | None:intergenic | 35.0% | |
| TGAAATTGTTCCGCAATTTG+TGG | - | chr3.3:26875097-26875116 | None:intergenic | 35.0% | |
| TGCTTCATACTTAGTGTGTT+TGG | + | chr3.3:26873693-26873712 | MS.gene96713:intron | 35.0% | |
| TGTAATTGTATGTGTCGTGT+CGG | - | chr3.3:26873242-26873261 | None:intergenic | 35.0% | |
| TTACCTCAATTCAGACCAAA+TGG | + | chr3.3:26872975-26872994 | MS.gene96713:CDS | 35.0% | |
| TTGGTCTGAATTGAGGTAAA+TGG | - | chr3.3:26872974-26872993 | None:intergenic | 35.0% | |
| TTTCCCCATTCTTTGAATAC+TGG | + | chr3.3:26877121-26877140 | MS.gene96713:intron | 35.0% | |
| TTTGTCACCTTCAAATACCA+AGG | + | chr3.3:26875352-26875371 | MS.gene96713:CDS | 35.0% | |
| ! | AAAAGTGAGTTGAAGGTCAA+GGG | - | chr3.3:26874175-26874194 | None:intergenic | 35.0% |
| ! | AAGGTATTCATCTACGAATC+GGG | + | chr3.3:26876151-26876170 | MS.gene96713:intron | 35.0% |
| ! | ACTTTACATGGCTTCTAAAG+TGG | + | chr3.3:26877772-26877791 | MS.gene96713:intron | 35.0% |
| ! | AGCTTGTTTATCCTTTCATC+AGG | - | chr3.3:26874541-26874560 | None:intergenic | 35.0% |
| ! | ATGAAGCACTAATACAGACA+TGG | - | chr3.3:26873681-26873700 | None:intergenic | 35.0% |
| ! | ATTTCTAGAAAATCCGCTAC+TGG | - | chr3.3:26877174-26877193 | None:intergenic | 35.0% |
| ! | CCACAATGTTAATGGTTCTA+TGG | - | chr3.3:26874447-26874466 | None:intergenic | 35.0% |
| ! | CTCATCTTTTCTGAACCTTA+AGG | + | chr3.3:26875298-26875317 | MS.gene96713:intron | 35.0% |
| ! | GACACCCAGAATTTTTATCA+TGG | + | chr3.3:26876035-26876054 | MS.gene96713:intron | 35.0% |
| ! | GTTCCCTTCTTTTTCTCTAA+CGG | + | chr3.3:26875842-26875861 | MS.gene96713:CDS | 35.0% |
| ! | GTTCTGCAAATGATAACGAA+GGG | - | chr3.3:26876954-26876973 | None:intergenic | 35.0% |
| ! | TAAAAGTGAGTTGAAGGTCA+AGG | - | chr3.3:26874176-26874195 | None:intergenic | 35.0% |
| ! | TCCTCTCGTTTCTTATGTTT+TGG | + | chr3.3:26873113-26873132 | MS.gene96713:intron | 35.0% |
| ! | TCTGAGTAAAAGTGAGTTGA+AGG | - | chr3.3:26874182-26874201 | None:intergenic | 35.0% |
| ! | TTAAGGCGCTTAATCTTTAC+AGG | + | chr3.3:26875525-26875544 | MS.gene96713:CDS | 35.0% |
| ! | TTGATTTGAAAGACGTGAAG+GGG | - | chr3.3:26876833-26876852 | None:intergenic | 35.0% |
| !! | ATCTGTCTGCTTTTCTCTAA+GGG | - | chr3.3:26874861-26874880 | None:intergenic | 35.0% |
| !! | GAAGGTATTCATCTACGAAT+CGG | + | chr3.3:26876150-26876169 | MS.gene96713:intron | 35.0% |
| !! | GATTGATTTGAAAGACGTGA+AGG | - | chr3.3:26876835-26876854 | None:intergenic | 35.0% |
| !! | GTGAAGCTTTGGATGAAAAT+TGG | - | chr3.3:26873006-26873025 | None:intergenic | 35.0% |
| !! | TATCTGTCTGCTTTTCTCTA+AGG | - | chr3.3:26874862-26874881 | None:intergenic | 35.0% |
| !! | TGAGGTTTTATGAGAACCAT+TGG | - | chr3.3:26876399-26876418 | None:intergenic | 35.0% |
| !! | TTTTTGAGGGATGAGAATTG+CGG | + | chr3.3:26875212-26875231 | MS.gene96713:intron | 35.0% |
| !!! | GCCTTCGGTGTTTAAATTTT+TGG | + | chr3.3:26874930-26874949 | MS.gene96713:intron | 35.0% |
| AACATAAGAAACGAGAGGAG+GGG | - | chr3.3:26873112-26873131 | None:intergenic | 40.0% | |
| AATAGAAATGCTGCCGTGAA+AGG | - | chr3.3:26875130-26875149 | None:intergenic | 40.0% | |
| AATATCCGAAGATACTAGCG+GGG | - | chr3.3:26876376-26876395 | None:intergenic | 40.0% | |
| AGGTCTATGAAGCACGAATA+CGG | - | chr3.3:26873474-26873493 | None:intergenic | 40.0% | |
| ATAACCAACAAGAGGGAAGA+CGG | + | chr3.3:26874718-26874737 | MS.gene96713:CDS | 40.0% | |
| ATCCTCTCCAGCAATATTGA+AGG | - | chr3.3:26876571-26876590 | None:intergenic | 40.0% | |
| ATGCTGTCTTTATGTCAGGA+AGG | + | chr3.3:26877049-26877068 | MS.gene96713:CDS | 40.0% | |
| ATTGCTGGAGAGGATTTCAA+CGG | + | chr3.3:26876576-26876595 | MS.gene96713:CDS | 40.0% | |
| ATTGTCAATGTGTCCTCCTA+TGG | + | chr3.3:26876000-26876019 | MS.gene96713:intron | 40.0% | |
| CAATGCTGCAACTGCATTAT+GGG | + | chr3.3:26875745-26875764 | MS.gene96713:CDS | 40.0% | |
| CACCTAGACTTATCACCTTA+AGG | - | chr3.3:26875316-26875335 | None:intergenic | 40.0% | |
| CAGGTCAGCTTCAATAACTT+AGG | + | chr3.3:26877530-26877549 | MS.gene96713:intron | 40.0% | |
| CCTGAGAATAACCAACAAGA+GGG | + | chr3.3:26874711-26874730 | MS.gene96713:CDS | 40.0% | |
| CTATTCACGTTCAACAGTTG+TGG | + | chr3.3:26875062-26875081 | MS.gene96713:intron | 40.0% | |
| CTCGTGCTTCATACTTAGTT+TGG | + | chr3.3:26873338-26873357 | MS.gene96713:intron | 40.0% | |
| CTGCAATCCGATTTCAAGAA+AGG | - | chr3.3:26875920-26875939 | None:intergenic | 40.0% | |
| CTTTCTTGAAATCGGATTGC+AGG | + | chr3.3:26875918-26875937 | MS.gene96713:intron | 40.0% | |
| GAATATCCGAAGATACTAGC+GGG | - | chr3.3:26876377-26876396 | None:intergenic | 40.0% | |
| GCACCGTTAGAGAAAAAGAA+GGG | - | chr3.3:26875848-26875867 | None:intergenic | 40.0% | |
| GGAATATCCGAAGATACTAG+CGG | - | chr3.3:26876378-26876397 | None:intergenic | 40.0% | |
| GGTCTATGAAAGTGAAGCTT+TGG | - | chr3.3:26873017-26873036 | None:intergenic | 40.0% | |
| GGTTCTCATAAAACCTCAAC+AGG | + | chr3.3:26876401-26876420 | MS.gene96713:CDS | 40.0% | |
| GTAATTGTATGTGTCGTGTC+GGG | - | chr3.3:26873241-26873260 | None:intergenic | 40.0% | |
| GTGATTGTAGCCACAAATTG+CGG | + | chr3.3:26875084-26875103 | MS.gene96713:intron | 40.0% | |
| GTTATCATTTGCAGAACCTC+CGG | + | chr3.3:26876957-26876976 | MS.gene96713:intron | 40.0% | |
| GTTTCAGTCGTTTGAGAGAA+GGG | - | chr3.3:26876996-26877015 | None:intergenic | 40.0% | |
| GTTTGTCAAAGTCAAAGCCA+TGG | + | chr3.3:26873040-26873059 | MS.gene96713:CDS | 40.0% | |
| TACTTTGTTCTCTCCTTGCA+AGG | + | chr3.3:26874600-26874619 | MS.gene96713:CDS | 40.0% | |
| TAGTTAGTGTCTACGAAGCA+CGG | + | chr3.3:26873186-26873205 | MS.gene96713:intron | 40.0% | |
| TAGTTAGTGTCTACGAAGCA+GGG | + | chr3.3:26873186-26873205 | MS.gene96713:intron | 40.0% | |
| TCAGTCTGATAGAGATCACA+TGG | + | chr3.3:26877699-26877718 | MS.gene96713:intron | 40.0% | |
| TCCATCAGAATTACCAACTC+AGG | - | chr3.3:26874971-26874990 | None:intergenic | 40.0% | |
| TCCTCTCCAGCAATATTGAA+GGG | - | chr3.3:26876570-26876589 | None:intergenic | 40.0% | |
| TCCTGAGAATAACCAACAAG+AGG | + | chr3.3:26874710-26874729 | MS.gene96713:CDS | 40.0% | |
| TCGTGTATGATCCTGATGAA+AGG | + | chr3.3:26874527-26874546 | MS.gene96713:CDS | 40.0% | |
| TCTGATAGAGATCACATGGT+TGG | + | chr3.3:26877703-26877722 | MS.gene96713:intron | 40.0% | |
| TGCACCGTTAGAGAAAAAGA+AGG | - | chr3.3:26875849-26875868 | None:intergenic | 40.0% | |
| TGCCTCTCTAGTGAGAAAAT+TGG | - | chr3.3:26877832-26877851 | None:intergenic | 40.0% | |
| TGGATAAAAGGGTTCCAACT+GGG | + | chr3.3:26875699-26875718 | MS.gene96713:CDS | 40.0% | |
| TGTGTGAGTTCTTGTAGTCA+AGG | - | chr3.3:26876234-26876253 | None:intergenic | 40.0% | |
| TGTTTCAGTCGTTTGAGAGA+AGG | - | chr3.3:26876997-26877016 | None:intergenic | 40.0% | |
| TTAGTTAGTGTCTACGAAGC+AGG | + | chr3.3:26873185-26873204 | MS.gene96713:intron | 40.0% | |
| TTCAACTGCAGAAGTCTACA+AGG | + | chr3.3:26876428-26876447 | MS.gene96713:CDS | 40.0% | |
| TTCACGGCAGCATTTCTATT+CGG | + | chr3.3:26875130-26875149 | MS.gene96713:intron | 40.0% | |
| TTGGATAAAAGGGTTCCAAC+TGG | + | chr3.3:26875698-26875717 | MS.gene96713:CDS | 40.0% | |
| ! | AAGGCATCCTTGGTATTTGA+AGG | - | chr3.3:26875362-26875381 | None:intergenic | 40.0% |
| ! | ATGGATGGTTCTTCTGAAAG+TGG | - | chr3.3:26872955-26872974 | None:intergenic | 40.0% |
| ! | ATTATTAGCGGTGTCAGTGT+CGG | + | chr3.3:26873284-26873303 | MS.gene96713:intron | 40.0% |
| ! | GCTTTGACTTTGACAAACTG+AGG | - | chr3.3:26873038-26873057 | None:intergenic | 40.0% |
| ! | GGAAGCACAATTGTTGGAAT+TGG | + | chr3.3:26877448-26877467 | MS.gene96713:CDS | 40.0% |
| ! | GGAGAGCCAAAAAGTGATTT+TGG | + | chr3.3:26874248-26874267 | MS.gene96713:intron | 40.0% |
| ! | GGTTCTGCAAATGATAACGA+AGG | - | chr3.3:26876955-26876974 | None:intergenic | 40.0% |
| ! | GTAATTGTATGTGTCGGTGT+CGG | - | chr3.3:26873589-26873608 | None:intergenic | 40.0% |
| ! | TAATGCTAGCTTCCTGCATT+AGG | - | chr3.3:26876277-26876296 | None:intergenic | 40.0% |
| ! | TGCCAATTTTCTCACTAGAG+AGG | + | chr3.3:26877827-26877846 | MS.gene96713:CDS | 40.0% |
| ! | TGGATGGTTCTTCTGAAAGT+GGG | - | chr3.3:26872954-26872973 | None:intergenic | 40.0% |
| ! | TGGGCCAAAATTGATTCTAG+AGG | + | chr3.3:26874002-26874021 | MS.gene96713:intron | 40.0% |
| !! | GTAAATTCTTCGGTGCGTTT+TGG | + | chr3.3:26874788-26874807 | MS.gene96713:intron | 40.0% |
| !! | TCCTGAGTTGGTAATTCTGA+TGG | + | chr3.3:26874967-26874986 | MS.gene96713:intron | 40.0% |
| !! | TTGTTTCTGCTACGCAATTG+CGG | - | chr3.3:26875017-26875036 | None:intergenic | 40.0% |
| !!! | CACTTCTTCGCTGATTTTAG+TGG | - | chr3.3:26877302-26877321 | None:intergenic | 40.0% |
| !!! | GCGGTCCACAAATTTTTTGT+TGG | + | chr3.3:26875231-26875250 | MS.gene96713:intron | 40.0% |
| !!! | GGGCACTGAAAAGTTCTTTT+GGG | + | chr3.3:26875556-26875575 | MS.gene96713:CDS | 40.0% |
| AAACAGCGAATTACAGCAGC+TGG | + | chr3.3:26877012-26877031 | MS.gene96713:CDS | 45.0% | |
| AAGGGTCGACATTACTAGTC+TGG | - | chr3.3:26876552-26876571 | None:intergenic | 45.0% | |
| AATGGCAAACTGCAGATCGT+GGG | - | chr3.3:26875170-26875189 | None:intergenic | 45.0% | |
| ACATGTTAGTCCCTCCATCA+GGG | + | chr3.3:26874904-26874923 | MS.gene96713:intron | 45.0% | |
| ACCAGATTCCTATCGTCAAG+AGG | - | chr3.3:26875407-26875426 | None:intergenic | 45.0% | |
| ACCCTTCAATATTGCTGGAG+AGG | + | chr3.3:26876566-26876585 | MS.gene96713:CDS | 45.0% | |
| ACCTCTTGACGATAGGAATC+TGG | + | chr3.3:26875403-26875422 | MS.gene96713:CDS | 45.0% | |
| ATAAGGAGGCTCCCATTTCA+AGG | + | chr3.3:26874575-26874594 | MS.gene96713:CDS | 45.0% | |
| ATATCCGAAGATACTAGCGG+GGG | - | chr3.3:26876375-26876394 | None:intergenic | 45.0% | |
| CAATCTCACTTGACCATTCC+TGG | - | chr3.3:26875814-26875833 | None:intergenic | 45.0% | |
| CAGGAATGGTCAAGTGAGAT+TGG | + | chr3.3:26875812-26875831 | MS.gene96713:CDS | 45.0% | |
| CATGGACACCAGATACGATA+CGG | - | chr3.3:26873663-26873682 | None:intergenic | 45.0% | |
| CCATGATATAGTTCACGCGA+AGG | + | chr3.3:26876732-26876751 | MS.gene96713:intron | 45.0% | |
| CCTTCGCGTGAACTATATCA+TGG | - | chr3.3:26876735-26876754 | None:intergenic | 45.0% | |
| CGGACTAATCTATCCTGAGT+TGG | + | chr3.3:26874955-26874974 | MS.gene96713:intron | 45.0% | |
| GACCCATTTGGTCTGAATTG+AGG | - | chr3.3:26872981-26873000 | None:intergenic | 45.0% | |
| GACCTGACAAGAATACGTCT+CGG | - | chr3.3:26877516-26877535 | None:intergenic | 45.0% | |
| GCAATGCTGCAACTGCATTA+TGG | + | chr3.3:26875744-26875763 | MS.gene96713:CDS | 45.0% | |
| GGAAGACGGGTATCATGATT+TGG | + | chr3.3:26874732-26874751 | MS.gene96713:CDS | 45.0% | |
| GGATAAAAGGGTTCCAACTG+GGG | + | chr3.3:26875700-26875719 | MS.gene96713:CDS | 45.0% | |
| GTTGATGTCCGTATCGTATC+TGG | + | chr3.3:26873652-26873671 | MS.gene96713:intron | 45.0% | |
| TAACCAACAAGAGGGAAGAC+GGG | + | chr3.3:26874719-26874738 | MS.gene96713:CDS | 45.0% | |
| TAATGGCAAACTGCAGATCG+TGG | - | chr3.3:26875171-26875190 | None:intergenic | 45.0% | |
| TACCGAGACGTATTCTTGTC+AGG | + | chr3.3:26877511-26877530 | MS.gene96713:CDS | 45.0% | |
| TAGTCAAGGTTGTCAACTCG+AGG | - | chr3.3:26876220-26876239 | None:intergenic | 45.0% | |
| TCACTAGAGAGGCAAATGAG+TGG | + | chr3.3:26877838-26877857 | MS.gene96713:CDS | 45.0% | |
| TCTGGAAGAGTCAGAAACCA+TGG | - | chr3.3:26873060-26873079 | None:intergenic | 45.0% | |
| TGAAGGTCAAGGGATGTGTT+TGG | - | chr3.3:26874165-26874184 | None:intergenic | 45.0% | |
| TGGGCAGCAAATCAATTCAG+TGG | + | chr3.3:26875764-26875783 | MS.gene96713:CDS | 45.0% | |
| TGTCGACCCTTCAATATTGC+TGG | + | chr3.3:26876561-26876580 | MS.gene96713:CDS | 45.0% | |
| TTGCTGGAGAGGATTTCAAC+GGG | + | chr3.3:26876577-26876596 | MS.gene96713:CDS | 45.0% | |
| ! | CCCTCTTGTTGGTTATTCTC+AGG | - | chr3.3:26874714-26874733 | None:intergenic | 45.0% |
| ! | GGATGGTTCTTCTGAAAGTG+GGG | - | chr3.3:26872953-26872972 | None:intergenic | 45.0% |
| ! | TTCTGAAAGTGGGGATAGAG+TGG | - | chr3.3:26872944-26872963 | None:intergenic | 45.0% |
| !! | CTTAGTTTGGTTCTGCTGTG+AGG | + | chr3.3:26873351-26873370 | MS.gene96713:intron | 45.0% |
| !!! | CGGGCACTGAAAAGTTCTTT+TGG | + | chr3.3:26875555-26875574 | MS.gene96713:CDS | 45.0% |
| AATGATACAGCGTCTACGGC+TGG | + | chr3.3:26876525-26876544 | MS.gene96713:intron | 50.0% | |
| ACGAATACGGACACCAGACA+TGG | - | chr3.3:26873461-26873480 | None:intergenic | 50.0% | |
| AGCAAAGAGCAAAGCTGCAG+AGG | - | chr3.3:26875040-26875059 | None:intergenic | 50.0% | |
| ATACCCGTCTTCCCTCTTGT+TGG | - | chr3.3:26874725-26874744 | None:intergenic | 50.0% | |
| ATTCAGTGGTTGTCCTGCCA+CGG | + | chr3.3:26875778-26875797 | MS.gene96713:CDS | 50.0% | |
| CATGTGACATGCCTAATCCG+AGG | - | chr3.3:26873565-26873584 | None:intergenic | 50.0% | |
| CGGAGAAAGAACTCCAGGAA+TGG | + | chr3.3:26875798-26875817 | MS.gene96713:CDS | 50.0% | |
| GAAGGGAGAACTTCAAACGC+CGG | - | chr3.3:26876979-26876998 | None:intergenic | 50.0% | |
| GACATGTTAGTCCCTCCATC+AGG | + | chr3.3:26874903-26874922 | MS.gene96713:intron | 50.0% | |
| GCAGTTGAACAAGCCTGTTG+AGG | - | chr3.3:26876417-26876436 | None:intergenic | 50.0% | |
| GCGAGGTGAGTCCAAATACT+AGG | + | chr3.3:26875888-26875907 | MS.gene96713:intron | 50.0% | |
| GTGTGTTTGGTTATGCCGTG+AGG | + | chr3.3:26873706-26873725 | MS.gene96713:intron | 50.0% | |
| TAAGAAACGAGAGGAGGGGA+AGG | - | chr3.3:26873108-26873127 | None:intergenic | 50.0% | |
| TCAGAGGTAGGAGTTGAAGC+AGG | - | chr3.3:26877873-26877892 | None:intergenic | 50.0% | |
| TCTGCAGCTTTGCTCTTTGC+TGG | + | chr3.3:26875039-26875058 | MS.gene96713:intron | 50.0% | |
| TGTTCCCCCGCTAGTATCTT+CGG | + | chr3.3:26876368-26876387 | MS.gene96713:CDS | 50.0% | |
| TTCACGCGAAGGTAATCGAG+CGG | + | chr3.3:26876743-26876762 | MS.gene96713:intron | 50.0% | |
| TTCCTGGAGTTCTTTCTCCG+TGG | - | chr3.3:26875798-26875817 | None:intergenic | 50.0% | |
| ! | ATTGGTGGACAAGGCATCCT+TGG | - | chr3.3:26875372-26875391 | None:intergenic | 50.0% |
| ! | TGCAGCGGAAGCACAATTGT+TGG | + | chr3.3:26877442-26877461 | MS.gene96713:intron | 50.0% |
| AAAAGGGTTCCAACTGGGGC+AGG | + | chr3.3:26875704-26875723 | MS.gene96713:CDS | 55.0% | |
| AAAGGGTTCCAACTGGGGCA+GGG | + | chr3.3:26875705-26875724 | MS.gene96713:CDS | 55.0% | |
| AACGGTGCAGCCTATTGCAC+TGG | + | chr3.3:26875860-26875879 | MS.gene96713:CDS | 55.0% | |
| CGAATTACAGCAGCTGGTCG+TGG | + | chr3.3:26877018-26877037 | MS.gene96713:CDS | 55.0% | |
| CTGGAGAGGATTTCAACGGG+TGG | + | chr3.3:26876580-26876599 | MS.gene96713:CDS | 55.0% | |
| GCCTTGTCCACCAATGTGTC+CGG | + | chr3.3:26875377-26875396 | MS.gene96713:CDS | 55.0% | |
| TACGAAGCACGGACACTCCA+CGG | + | chr3.3:26873197-26873216 | MS.gene96713:intron | 55.0% | |
| TACGAAGCAGGGACACTCCT+CGG | + | chr3.3:26873545-26873564 | MS.gene96713:intron | 55.0% | |
| TGCCACGGAGAAAGAACTCC+AGG | + | chr3.3:26875793-26875812 | MS.gene96713:CDS | 55.0% | |
| TGGAGTTCTTTCTCCGTGGC+AGG | - | chr3.3:26875794-26875813 | None:intergenic | 55.0% | |
| ! | AAGAGGTACGCCGGACACAT+TGG | - | chr3.3:26875390-26875409 | None:intergenic | 55.0% |
| ! | CCTATCGTCAAGAGGTACGC+CGG | - | chr3.3:26875399-26875418 | None:intergenic | 55.0% |
| ACACCGAAGGCAGTCCCTGA+TGG | - | chr3.3:26874921-26874940 | None:intergenic | 60.0% | |
| ACGTGGACACGCCTAATCCG+TGG | - | chr3.3:26873217-26873236 | None:intergenic | 60.0% | |
| AGGTACGCCGGACACATTGG+TGG | - | chr3.3:26875387-26875406 | None:intergenic | 60.0% | |
| CCGGCGTACCTCTTGACGAT+AGG | + | chr3.3:26875396-26875415 | MS.gene96713:CDS | 60.0% | |
| CCTCCATCAGGGACTGCCTT+CGG | + | chr3.3:26874915-26874934 | MS.gene96713:intron | 60.0% | |
| CGAAGGCAGTCCCTGATGGA+GGG | - | chr3.3:26874917-26874936 | None:intergenic | 60.0% | |
| CTCGCCTCGACCAGTGCAAT+AGG | - | chr3.3:26875873-26875892 | None:intergenic | 60.0% | |
| GCACGGACACTCCACGGATT+AGG | + | chr3.3:26873203-26873222 | MS.gene96713:intron | 60.0% | |
| GCAGGGACACTCCTCGGATT+AGG | + | chr3.3:26873551-26873570 | MS.gene96713:intron | 60.0% | |
| GGCAAACTGCAGATCGTGGG+CGG | - | chr3.3:26875167-26875186 | None:intergenic | 60.0% | |
| GGGAGAACTTCAAACGCCGG+AGG | - | chr3.3:26876976-26876995 | None:intergenic | 60.0% | |
| TATGTGTCGTGTCGGGCACG+TGG | - | chr3.3:26873234-26873253 | None:intergenic | 60.0% | |
| ! | CTATTGCACTGGTCGAGGCG+AGG | + | chr3.3:26875871-26875890 | MS.gene96713:CDS | 60.0% |
| ! | GCAGCCTATTGCACTGGTCG+AGG | + | chr3.3:26875866-26875885 | MS.gene96713:CDS | 60.0% |
| ! | GCCGGACACATTGGTGGACA+AGG | - | chr3.3:26875381-26875400 | None:intergenic | 60.0% |
| !! | GGTGTCAGTGTCGGTGTGTC+TGG | + | chr3.3:26873293-26873312 | MS.gene96713:intron | 60.0% |
| !! | GGTGTTGGCGTGTCCATGTC+TGG | + | chr3.3:26873445-26873464 | MS.gene96713:intron | 60.0% |
| CCGAAGGCAGTCCCTGATGG+AGG | - | chr3.3:26874918-26874937 | None:intergenic | 65.0% | |
| GTTCCAACTGGGGCAGGGCT+TGG | + | chr3.3:26875710-26875729 | MS.gene96713:CDS | 65.0% | |
| CCAACTGGGGCAGGGCTTGG+TGG | + | chr3.3:26875713-26875732 | MS.gene96713:CDS | 70.0% | |
| CCACCAAGCCCTGCCCCAGT+TGG | - | chr3.3:26875716-26875735 | None:intergenic | 70.0% | |
| !! | ACTGGGGCAGGGCTTGGTGG+TGG | + | chr3.3:26875716-26875735 | MS.gene96713:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 26872912 | 26877917 | 26872912 | ID=MS.gene96713 |
| chr3.3 | mRNA | 26872912 | 26877917 | 26872912 | ID=MS.gene96713.t1;Parent=MS.gene96713 |
| chr3.3 | exon | 26872912 | 26873091 | 26872912 | ID=MS.gene96713.t1.exon1;Parent=MS.gene96713.t1 |
| chr3.3 | CDS | 26872912 | 26873091 | 26872912 | ID=cds.MS.gene96713.t1;Parent=MS.gene96713.t1 |
| chr3.3 | exon | 26874526 | 26874621 | 26874526 | ID=MS.gene96713.t1.exon2;Parent=MS.gene96713.t1 |
| chr3.3 | CDS | 26874526 | 26874621 | 26874526 | ID=cds.MS.gene96713.t1;Parent=MS.gene96713.t1 |
| chr3.3 | exon | 26874700 | 26874768 | 26874700 | ID=MS.gene96713.t1.exon3;Parent=MS.gene96713.t1 |
| chr3.3 | CDS | 26874700 | 26874768 | 26874700 | ID=cds.MS.gene96713.t1;Parent=MS.gene96713.t1 |
| chr3.3 | exon | 26875320 | 26875424 | 26875320 | ID=MS.gene96713.t1.exon4;Parent=MS.gene96713.t1 |
| chr3.3 | CDS | 26875320 | 26875424 | 26875320 | ID=cds.MS.gene96713.t1;Parent=MS.gene96713.t1 |
| chr3.3 | exon | 26875521 | 26875577 | 26875521 | ID=MS.gene96713.t1.exon5;Parent=MS.gene96713.t1 |
| chr3.3 | CDS | 26875521 | 26875577 | 26875521 | ID=cds.MS.gene96713.t1;Parent=MS.gene96713.t1 |
| chr3.3 | exon | 26875692 | 26875892 | 26875692 | ID=MS.gene96713.t1.exon6;Parent=MS.gene96713.t1 |
| chr3.3 | CDS | 26875692 | 26875892 | 26875692 | ID=cds.MS.gene96713.t1;Parent=MS.gene96713.t1 |
| chr3.3 | exon | 26876357 | 26876449 | 26876357 | ID=MS.gene96713.t1.exon7;Parent=MS.gene96713.t1 |
| chr3.3 | CDS | 26876357 | 26876449 | 26876357 | ID=cds.MS.gene96713.t1;Parent=MS.gene96713.t1 |
| chr3.3 | exon | 26876535 | 26876634 | 26876535 | ID=MS.gene96713.t1.exon8;Parent=MS.gene96713.t1 |
| chr3.3 | CDS | 26876535 | 26876634 | 26876535 | ID=cds.MS.gene96713.t1;Parent=MS.gene96713.t1 |
| chr3.3 | exon | 26876971 | 26877070 | 26876971 | ID=MS.gene96713.t1.exon9;Parent=MS.gene96713.t1 |
| chr3.3 | CDS | 26876971 | 26877070 | 26876971 | ID=cds.MS.gene96713.t1;Parent=MS.gene96713.t1 |
| chr3.3 | exon | 26877447 | 26877532 | 26877447 | ID=MS.gene96713.t1.exon10;Parent=MS.gene96713.t1 |
| chr3.3 | CDS | 26877447 | 26877532 | 26877447 | ID=cds.MS.gene96713.t1;Parent=MS.gene96713.t1 |
| chr3.3 | exon | 26877826 | 26877917 | 26877826 | ID=MS.gene96713.t1.exon11;Parent=MS.gene96713.t1 |
| chr3.3 | CDS | 26877826 | 26877917 | 26877826 | ID=cds.MS.gene96713.t1;Parent=MS.gene96713.t1 |
| Gene Sequence |
| Protein sequence |
