Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96898.t1 | XP_013467222.1 | 97 | 202 | 6 | 0 | 1 | 202 | 1 | 202 | 4.30E-108 | 400.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96898.t1 | F6HS55 | 86.6 | 201 | 27 | 0 | 1 | 201 | 1 | 201 | 1.2e-98 | 360.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96898.t1 | B7FMR3 | 97.0 | 202 | 6 | 0 | 1 | 202 | 1 | 202 | 3.1e-108 | 400.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene96898 | MS.gene065401 | PPI |
| MS.gene96898 | MS.gene029745 | PPI |
| MS.gene96898 | MS.gene47429 | PPI |
| MS.gene96898 | MS.gene065402 | PPI |
| MS.gene96898 | MS.gene051416 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96898.t1 | MTR_1g047390 | 97.030 | 202 | 6 | 0 | 1 | 202 | 1 | 202 | 3.25e-146 | 405 |
| MS.gene96898.t1 | MTR_1g047400 | 78.689 | 61 | 10 | 1 | 142 | 202 | 55 | 112 | 2.44e-25 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96898.t1 | AT4G13720 | 85.864 | 191 | 27 | 0 | 11 | 201 | 23 | 213 | 2.64e-124 | 350 |
| MS.gene96898.t1 | AT4G13720 | 85.864 | 191 | 27 | 0 | 11 | 201 | 10 | 200 | 8.09e-124 | 348 |
Find 44 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGAGGACCCAATGATTT+TGG | 0.178011 | 1.4:+32232203 | MS.gene96898:CDS |
| TCAGGCTCTCCTTGCAATTC+AGG | 0.238415 | 1.4:-32226945 | None:intergenic |
| GGCTCGTTTAGCTGCTATTC+AGG | 0.250429 | 1.4:+32226986 | MS.gene96898:CDS |
| AATGTGATAGGTTCACTATT+TGG | 0.282186 | 1.4:-32231820 | None:intergenic |
| GCTATAAAATCTGCTGCCTC+TGG | 0.310046 | 1.4:+32226673 | MS.gene96898:CDS |
| TTTGTTTGTGGCAAGGTTAA+AGG | 0.314172 | 1.4:+32227259 | MS.gene96898:intron |
| AAATCATTGGGTCCTCTTGC+AGG | 0.318605 | 1.4:-32232200 | None:intergenic |
| AACCTTCATGACCAATCTTC+TGG | 0.326883 | 1.4:-32231621 | None:intergenic |
| TTTCACAAGTGCAAGAGATT+TGG | 0.331373 | 1.4:-32232447 | None:intergenic |
| CGTCCGGTTACCTTTGTTAC+CGG | 0.339638 | 1.4:+32226709 | MS.gene96898:CDS |
| CCTCTGTTTCAATGCCTTGA+AGG | 0.341490 | 1.4:+32227306 | MS.gene96898:CDS |
| AATGCCTTGAAGGGTCTTCC+AGG | 0.369010 | 1.4:+32227316 | MS.gene96898:CDS |
| TGAGGAAGTTCGCGCCATCT+TGG | 0.379218 | 1.4:+32226747 | MS.gene96898:CDS |
| GAGGAAGTTCGCGCCATCTT+GGG | 0.385085 | 1.4:+32226748 | MS.gene96898:CDS |
| CAAGGTTAAAGGACCTGTTT+TGG | 0.391935 | 1.4:+32227270 | MS.gene96898:intron |
| GGGATCCCATCCAAAATCAT+TGG | 0.403416 | 1.4:-32232213 | None:intergenic |
| CTCTGTTTCAATGCCTTGAA+GGG | 0.411268 | 1.4:+32227307 | MS.gene96898:CDS |
| CAAGTGTCTTCAACCAAAAC+AGG | 0.430958 | 1.4:-32227283 | None:intergenic |
| AAATGGTTTCTCCAGAAGAT+TGG | 0.440369 | 1.4:+32231610 | MS.gene96898:CDS |
| CTATAAAATCTGCTGCCTCT+GGG | 0.454466 | 1.4:+32226674 | MS.gene96898:CDS |
| TCTACCTGGAAGACCCTTCA+AGG | 0.460722 | 1.4:-32227320 | None:intergenic |
| TGAAGATATCTCCAAAGAAA+AGG | 0.474742 | 1.4:+32226965 | MS.gene96898:CDS |
| AGGTCTCAACAATCTGTTGA+TGG | 0.476377 | 1.4:+32231744 | MS.gene96898:intron |
| TACGTTTGATCATAGCCATC+AGG | 0.485088 | 1.4:-32232245 | None:intergenic |
| GGTATTACAGTCAAGTTTGA+GGG | 0.485101 | 1.4:-32226791 | None:intergenic |
| CTCCAGAAGATTGGTCATGA+AGG | 0.494095 | 1.4:+32231619 | MS.gene96898:CDS |
| CCTGTTGGACTGGGCTCATA+CGG | 0.495902 | 1.4:-32230581 | None:intergenic |
| TTTGAGGGATTGAAAAGGAA+TGG | 0.496515 | 1.4:-32226776 | None:intergenic |
| GGATCCCATCCAAAATCATT+GGG | 0.509802 | 1.4:-32232212 | None:intergenic |
| TGGTATTACAGTCAAGTTTG+AGG | 0.510157 | 1.4:-32226792 | None:intergenic |
| TGGGTTGGTACTGCCACGTC+CGG | 0.515611 | 1.4:+32226693 | MS.gene96898:CDS |
| TTTCCGGTAACAAAGGTAAC+CGG | 0.526489 | 1.4:-32226712 | None:intergenic |
| TCAAGTTTGAGGGATTGAAA+AGG | 0.538913 | 1.4:-32226781 | None:intergenic |
| AGGAATGGAGTGACCCAAGA+TGG | 0.567947 | 1.4:-32226761 | None:intergenic |
| ACGCATGTTTCAGATTTGAA+AGG | 0.571486 | 1.4:-32232495 | None:intergenic |
| AAAATCTGCTGCCTCTGGGT+TGG | 0.581336 | 1.4:+32226678 | MS.gene96898:CDS |
| TTTGTAGTACCTGAATTGCA+AGG | 0.586090 | 1.4:+32226936 | MS.gene96898:intron |
| GTAACAAAGGTAACCGGACG+TGG | 0.591952 | 1.4:-32226706 | None:intergenic |
| GGGAAGATTGTTCCTGCAAG+AGG | 0.592886 | 1.4:+32232188 | MS.gene96898:CDS |
| TTTGGCATTTCCGGTAACAA+AGG | 0.594064 | 1.4:-32226719 | None:intergenic |
| ACTATTTGGACCGATTGCAA+AGG | 0.605431 | 1.4:-32231806 | None:intergenic |
| CCTTCAAGGCATTGAAACAG+AGG | 0.625146 | 1.4:-32227306 | None:intergenic |
| CAAGTGCAAGAGATTTGGAG+CGG | 0.668522 | 1.4:-32232442 | None:intergenic |
| ACGTGGCAGTACCAACCCAG+AGG | 0.735147 | 1.4:-32226689 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATTCTCAAAATAAAA+AGG | - | chr1.4:32229927-32229946 | None:intergenic | 10.0% |
| !! | TATTAGTAAAGTTAAATATA+AGG | - | chr1.4:32232125-32232144 | None:intergenic | 10.0% |
| !!! | ATATATTTTGTCATTTATTT+TGG | + | chr1.4:32230111-32230130 | MS.gene96898:intron | 10.0% |
| !! | AATGACATGAAATAAATTAA+AGG | - | chr1.4:32232278-32232297 | None:intergenic | 15.0% |
| !! | ACATTTGCATATAAAAAAAA+AGG | - | chr1.4:32227065-32227084 | None:intergenic | 15.0% |
| !! | ACTCAAATAATAAACAAAAT+TGG | - | chr1.4:32226842-32226861 | None:intergenic | 15.0% |
| !! | ATGAGATTCAATTATAATTA+AGG | - | chr1.4:32228844-32228863 | None:intergenic | 15.0% |
| !! | TGATTATATTATGCAATATT+TGG | + | chr1.4:32231352-32231371 | MS.gene96898:intron | 15.0% |
| !!! | AATTTTATTCTTTTCTTCTT+TGG | - | chr1.4:32232417-32232436 | None:intergenic | 15.0% |
| !!! | TTATATTCACAACTTAATTT+TGG | + | chr1.4:32228982-32229001 | MS.gene96898:intron | 15.0% |
| !!! | TTGTTTATTATTTTTGTTGT+AGG | + | chr1.4:32228712-32228731 | MS.gene96898:intron | 15.0% |
| !! | AAAGGATATGGATAAATAAT+AGG | - | chr1.4:32231385-32231404 | None:intergenic | 20.0% |
| !! | ACTAAATGGTGAAATATATT+TGG | - | chr1.4:32230185-32230204 | None:intergenic | 20.0% |
| !! | ATATAAACCAGAACATAATA+CGG | + | chr1.4:32228753-32228772 | MS.gene96898:intron | 20.0% |
| !! | ATTTACATGTTAATATTGTG+AGG | + | chr1.4:32231903-32231922 | MS.gene96898:intron | 20.0% |
| !! | TATAAAAACTTTATATACCG+TGG | + | chr1.4:32230275-32230294 | MS.gene96898:intron | 20.0% |
| !! | TTAATAGACAAAATCAAAAG+TGG | + | chr1.4:32228526-32228545 | MS.gene96898:intron | 20.0% |
| !! | TTATTAGGTATTATTGATCT+GGG | + | chr1.4:32227673-32227692 | MS.gene96898:intron | 20.0% |
| !! | TTCAATTATAATTAAGGATC+AGG | - | chr1.4:32228838-32228857 | None:intergenic | 20.0% |
| !! | TTTAATAAAACACAATCTTG+AGG | - | chr1.4:32228413-32228432 | None:intergenic | 20.0% |
| !! | TTTATTAGGTATTATTGATC+TGG | + | chr1.4:32227672-32227691 | MS.gene96898:intron | 20.0% |
| !!! | AACATTTGTGTTTTTTTCAT+TGG | + | chr1.4:32228563-32228582 | MS.gene96898:intron | 20.0% |
| !!! | AATTAAAGTCTTTTAGATGA+GGG | + | chr1.4:32227844-32227863 | MS.gene96898:intron | 20.0% |
| !!! | ACTTAAAGTACACTTTTATA+AGG | - | chr1.4:32227516-32227535 | None:intergenic | 20.0% |
| !!! | ATAAAATTGTTTTTGGAAAG+CGG | - | chr1.4:32231865-32231884 | None:intergenic | 20.0% |
| !!! | CATGCATATAAAATTGTTTT+TGG | - | chr1.4:32231872-32231891 | None:intergenic | 20.0% |
| !!! | TGTAGTAATCTAATCAATTT+TGG | + | chr1.4:32231412-32231431 | MS.gene96898:intron | 20.0% |
| !!! | TTTCTCATTATTTTTGTTTG+TGG | + | chr1.4:32227247-32227266 | MS.gene96898:intron | 20.0% |
| ! | AAAAAGAAAAATACAAGCCT+AGG | - | chr1.4:32227042-32227061 | None:intergenic | 25.0% |
| ! | AAAGACTATTTAGATTTGGA+AGG | - | chr1.4:32228654-32228673 | None:intergenic | 25.0% |
| ! | AAATGGTGAAATATATTTGG+AGG | - | chr1.4:32230182-32230201 | None:intergenic | 25.0% |
| ! | AAATTGGATAAGAAAGATTG+TGG | - | chr1.4:32226826-32226845 | None:intergenic | 25.0% |
| ! | AACATATGATTTCTCAAAGT+TGG | + | chr1.4:32227586-32227605 | MS.gene96898:intron | 25.0% |
| ! | AAGTTGTGAATATAAACTAC+TGG | - | chr1.4:32228977-32228996 | None:intergenic | 25.0% |
| ! | AATTGGATAAGAAAGATTGT+GGG | - | chr1.4:32226825-32226844 | None:intergenic | 25.0% |
| ! | AGATTACTACATGTTCATAA+AGG | - | chr1.4:32231403-32231422 | None:intergenic | 25.0% |
| ! | AGTTCAGAAAATTCAGAATA+TGG | - | chr1.4:32230478-32230497 | None:intergenic | 25.0% |
| ! | ATACTAAAGAATTTGTGACT+CGG | + | chr1.4:32227962-32227981 | MS.gene96898:intron | 25.0% |
| ! | ATGGTATAAAGATACATTCA+TGG | - | chr1.4:32230356-32230375 | None:intergenic | 25.0% |
| ! | ATTTAAAAATCCAGTAGACT+TGG | + | chr1.4:32229463-32229482 | MS.gene96898:intron | 25.0% |
| ! | CAAGAAAATTATTATCTACC+TGG | - | chr1.4:32227337-32227356 | None:intergenic | 25.0% |
| ! | TAATTCTAAGCTTATGATCT+AGG | + | chr1.4:32230418-32230437 | MS.gene96898:intron | 25.0% |
| ! | TATATTTCACCATTTAGTCA+CGG | + | chr1.4:32230187-32230206 | MS.gene96898:intron | 25.0% |
| ! | TATTAAACCTTTGATGTTGA+GGG | + | chr1.4:32230307-32230326 | MS.gene96898:intron | 25.0% |
| ! | TATTAACCATTTCATCAACA+CGG | - | chr1.4:32228512-32228531 | None:intergenic | 25.0% |
| ! | TGAACAAGAACTTACATATA+CGG | - | chr1.4:32227435-32227454 | None:intergenic | 25.0% |
| ! | TGCAAAAGACTATTTAGATT+TGG | - | chr1.4:32228658-32228677 | None:intergenic | 25.0% |
| ! | TGCAAATGTTAGTAAATTAG+TGG | + | chr1.4:32227076-32227095 | MS.gene96898:intron | 25.0% |
| ! | TGTAAGATATCAAGAAAAGA+AGG | + | chr1.4:32229828-32229847 | MS.gene96898:intron | 25.0% |
| ! | TTATAAGGTCTTAAACTATC+AGG | - | chr1.4:32227501-32227520 | None:intergenic | 25.0% |
| ! | TTATTAAACCTTTGATGTTG+AGG | + | chr1.4:32230306-32230325 | MS.gene96898:intron | 25.0% |
| ! | TTCAAAGCTGAAAAAAATTG+AGG | + | chr1.4:32232081-32232100 | MS.gene96898:intron | 25.0% |
| ! | TTCAATATGGTATTACTACT+AGG | + | chr1.4:32229106-32229125 | MS.gene96898:intron | 25.0% |
| ! | TTCAATGAGTAAATTTACGA+CGG | + | chr1.4:32231930-32231949 | MS.gene96898:intron | 25.0% |
| ! | TTGATATGAAGAAATGAAAC+TGG | - | chr1.4:32228444-32228463 | None:intergenic | 25.0% |
| ! | TTTATTTCCGTATTATGTTC+TGG | - | chr1.4:32228763-32228782 | None:intergenic | 25.0% |
| !! | AAGAATAACACGTTTTTACA+AGG | - | chr1.4:32231980-32231999 | None:intergenic | 25.0% |
| !! | AGAATAACACGTTTTTACAA+GGG | - | chr1.4:32231979-32231998 | None:intergenic | 25.0% |
| !! | ATACCACTATAGTGTTTTAT+GGG | + | chr1.4:32230019-32230038 | MS.gene96898:intron | 25.0% |
| !! | ATCCTTCATTTTACCAAAAA+TGG | - | chr1.4:32231292-32231311 | None:intergenic | 25.0% |
| !! | ATCTATTTCCTTTTATGCAT+TGG | + | chr1.4:32229756-32229775 | MS.gene96898:intron | 25.0% |
| !! | CAATTAAAGTCTTTTAGATG+AGG | + | chr1.4:32227843-32227862 | MS.gene96898:intron | 25.0% |
| !! | GAATATTTCAAACTTTTGCA+GGG | + | chr1.4:32227409-32227428 | MS.gene96898:intron | 25.0% |
| !! | GGTTATTATGTTAGTTTCTA+TGG | + | chr1.4:32227097-32227116 | MS.gene96898:intron | 25.0% |
| !! | TATACCACTATAGTGTTTTA+TGG | + | chr1.4:32230018-32230037 | MS.gene96898:intron | 25.0% |
| !! | TATTGAACTTCAGTACTTTT+TGG | - | chr1.4:32229093-32229112 | None:intergenic | 25.0% |
| !! | TGAATATTTCAAACTTTTGC+AGG | + | chr1.4:32227408-32227427 | MS.gene96898:intron | 25.0% |
| !! | TTTTCTATCCATTTTCTGTA+AGG | + | chr1.4:32228317-32228336 | MS.gene96898:intron | 25.0% |
| !!! | AAAACGTTCAGACTTTTTTT+TGG | + | chr1.4:32229416-32229435 | MS.gene96898:intron | 25.0% |
| !!! | AAAAGTACTGAAGTTCAATA+TGG | + | chr1.4:32229093-32229112 | MS.gene96898:intron | 25.0% |
| !!! | AAACGTTCAGACTTTTTTTT+GGG | + | chr1.4:32229417-32229436 | MS.gene96898:intron | 25.0% |
| !!! | AGTTTTGTTTCATTTTCTTG+TGG | + | chr1.4:32229561-32229580 | MS.gene96898:intron | 25.0% |
| AAAAGTTGCTCAAAGAATGA+GGG | + | chr1.4:32230756-32230775 | MS.gene96898:intron | 30.0% | |
| AACACTTGGGTGTATATTAA+TGG | - | chr1.4:32229186-32229205 | None:intergenic | 30.0% | |
| AACCAAGAACTAAAAATCTG+AGG | - | chr1.4:32231676-32231695 | None:intergenic | 30.0% | |
| AACCTAAAATCATACAACCA+AGG | - | chr1.4:32227202-32227221 | None:intergenic | 30.0% | |
| AAGAAGTAGAAAGTGAAAGA+GGG | + | chr1.4:32230665-32230684 | MS.gene96898:intron | 30.0% | |
| AATGTGATAGGTTCACTATT+TGG | - | chr1.4:32231823-32231842 | None:intergenic | 30.0% | |
| ACACAACAATTACAGAGTTA+TGG | - | chr1.4:32231650-32231669 | None:intergenic | 30.0% | |
| ACACTTGGGTGTATATTAAT+GGG | - | chr1.4:32229185-32229204 | None:intergenic | 30.0% | |
| AGAATCAAAAGAAACAGGAT+GGG | - | chr1.4:32228590-32228609 | None:intergenic | 30.0% | |
| AGACTATAGAGTATAGACTT+AGG | + | chr1.4:32227753-32227772 | MS.gene96898:intron | 30.0% | |
| AGTAAAAGCAATATCACTTC+AGG | - | chr1.4:32231333-32231352 | None:intergenic | 30.0% | |
| ATACAAAAAATCCATTGCCA+AGG | - | chr1.4:32231099-32231118 | None:intergenic | 30.0% | |
| ATACCATGAATGCAACATAT+AGG | + | chr1.4:32230369-32230388 | MS.gene96898:intron | 30.0% | |
| ATAGTGGTATAGTGAATAGT+AGG | - | chr1.4:32230009-32230028 | None:intergenic | 30.0% | |
| ATATCTTACAAGCTGTTCTA+TGG | - | chr1.4:32229818-32229837 | None:intergenic | 30.0% | |
| ATTGGATAAGAAAGATTGTG+GGG | - | chr1.4:32226824-32226843 | None:intergenic | 30.0% | |
| CATAAAACTGTACAATAAGC+AGG | - | chr1.4:32226907-32226926 | None:intergenic | 30.0% | |
| CTACATGTTCATAAAGGATA+TGG | - | chr1.4:32231397-32231416 | None:intergenic | 30.0% | |
| GTGTTCTCTTAAAATGACAA+CGG | + | chr1.4:32229201-32229220 | MS.gene96898:intron | 30.0% | |
| GTTTAATAACTATACGTCCA+CGG | - | chr1.4:32230295-32230314 | None:intergenic | 30.0% | |
| TAACCCATAAAACACTATAG+TGG | - | chr1.4:32230025-32230044 | None:intergenic | 30.0% | |
| TCCTCTCTTAGATAAAACTA+GGG | - | chr1.4:32227806-32227825 | None:intergenic | 30.0% | |
| TCTCTCAACATCAAATAGTT+TGG | - | chr1.4:32231255-32231274 | None:intergenic | 30.0% | |
| TCTTAGATAAAACTAGGGAA+TGG | - | chr1.4:32227801-32227820 | None:intergenic | 30.0% | |
| TGAAGATATCTCCAAAGAAA+AGG | + | chr1.4:32226965-32226984 | MS.gene96898:CDS | 30.0% | |
| TGACCTTCCTTATGTTTATT+GGG | + | chr1.4:32228121-32228140 | MS.gene96898:intron | 30.0% | |
| TGCGATAAAGATGAAATAGT+TGG | + | chr1.4:32232017-32232036 | MS.gene96898:intron | 30.0% | |
| TGGTATGTCTGTAAAACAAT+AGG | + | chr1.4:32232037-32232056 | MS.gene96898:intron | 30.0% | |
| TTATTCTGTGTAGAGAAGTT+TGG | + | chr1.4:32228258-32228277 | MS.gene96898:intron | 30.0% | |
| TTGTTAAATCATGCAGCAAA+TGG | + | chr1.4:32231593-32231612 | MS.gene96898:intron | 30.0% | |
| ! | ATGCATTGATAACCAAAACA+GGG | - | chr1.4:32231210-32231229 | None:intergenic | 30.0% |
| ! | ATTCTTCTTGATCATTTTGC+AGG | + | chr1.4:32231724-32231743 | MS.gene96898:intron | 30.0% |
| ! | ATTTTCTCTCATAAACACCT+AGG | + | chr1.4:32227022-32227041 | MS.gene96898:intron | 30.0% |
| ! | GATTTTCCAAAATTTCAACG+AGG | - | chr1.4:32229386-32229405 | None:intergenic | 30.0% |
| ! | GTTTTTCCTGAAAATGTGAT+AGG | - | chr1.4:32231835-32231854 | None:intergenic | 30.0% |
| ! | TATGATTTCTCAAAGTTGGT+TGG | + | chr1.4:32227590-32227609 | MS.gene96898:intron | 30.0% |
| ! | TCATTCTTTGAGCAACTTTT+GGG | - | chr1.4:32230756-32230775 | None:intergenic | 30.0% |
| ! | TGTGTATTTTCCTTTGCAAT+CGG | + | chr1.4:32231796-32231815 | MS.gene96898:CDS | 30.0% |
| !! | CATTGATAATGTTGAATGTC+TGG | + | chr1.4:32229884-32229903 | MS.gene96898:intron | 30.0% |
| !! | GTCATTTTAAGAGAACACTT+GGG | - | chr1.4:32229199-32229218 | None:intergenic | 30.0% |
| !! | GTTTCTAAAGCATCAGTATT+AGG | + | chr1.4:32231525-32231544 | MS.gene96898:intron | 30.0% |
| !! | TTGGTTGTATGATTTTAGGT+TGG | + | chr1.4:32227201-32227220 | MS.gene96898:intron | 30.0% |
| !! | TTTTCTTTGGAGATATCTTC+AGG | - | chr1.4:32226966-32226985 | None:intergenic | 30.0% |
| !!! | AGACATAAGTATGCCATTTT+TGG | + | chr1.4:32231276-32231295 | MS.gene96898:intron | 30.0% |
| !!! | CATTATTTTTGTTTGTGGCA+AGG | + | chr1.4:32227252-32227271 | MS.gene96898:intron | 30.0% |
| !!! | GATTTTTAGTTCTTGGTTTC+AGG | + | chr1.4:32231678-32231697 | MS.gene96898:intron | 30.0% |
| !!! | GTCATTGAAAACACTGATTT+TGG | + | chr1.4:32230055-32230074 | MS.gene96898:intron | 30.0% |
| !!! | TGCCATTTTTGGTAAAATGA+AGG | + | chr1.4:32231287-32231306 | MS.gene96898:intron | 30.0% |
| !!! | TGGTGATGTGTATTTTTTGA+TGG | + | chr1.4:32229581-32229600 | MS.gene96898:intron | 30.0% |
| !!! | TGTCATTTTAAGAGAACACT+TGG | - | chr1.4:32229200-32229219 | None:intergenic | 30.0% |
| AAAAGATAACTGAGCTTGCA+GGG | - | chr1.4:32228619-32228638 | None:intergenic | 35.0% | |
| AAACCCAAAAGCAAAAAGCT+GGG | - | chr1.4:32228893-32228912 | None:intergenic | 35.0% | |
| AAATGGTTTCTCCAGAAGAT+TGG | + | chr1.4:32231610-32231629 | MS.gene96898:CDS | 35.0% | |
| AAATTTCAACGAGGCATAAC+TGG | - | chr1.4:32229377-32229396 | None:intergenic | 35.0% | |
| AATCCAGCTTAGAAGGAAAA+AGG | - | chr1.4:32228787-32228806 | None:intergenic | 35.0% | |
| ACAAGAATGTTGACATGTCT+TGG | + | chr1.4:32229792-32229811 | MS.gene96898:intron | 35.0% | |
| ACAAGTTGTCATCCTCAAAA+TGG | + | chr1.4:32228477-32228496 | MS.gene96898:intron | 35.0% | |
| ATGAAACAAAACTCACTTGC+AGG | - | chr1.4:32229554-32229573 | None:intergenic | 35.0% | |
| ATGGCGCTATAACACAATAT+TGG | - | chr1.4:32229237-32229256 | None:intergenic | 35.0% | |
| ATGTGAGAAAATGGTCGATA+TGG | - | chr1.4:32228935-32228954 | None:intergenic | 35.0% | |
| ATGTTCCAGTTAAATGAGCT+TGG | + | chr1.4:32230723-32230742 | MS.gene96898:intron | 35.0% | |
| ATGTTTATGCCGTGACTAAA+TGG | - | chr1.4:32230199-32230218 | None:intergenic | 35.0% | |
| ATTTGTACACTCAACAGTAC+GGG | + | chr1.4:32230790-32230809 | MS.gene96898:intron | 35.0% | |
| CAAAAGTTGCTCAAAGAATG+AGG | + | chr1.4:32230755-32230774 | MS.gene96898:intron | 35.0% | |
| CAAATCCTGTTGAGTGATTT+AGG | + | chr1.4:32228231-32228250 | MS.gene96898:intron | 35.0% | |
| CAAGGTGTATTCTCTCAAAT+AGG | - | chr1.4:32227184-32227203 | None:intergenic | 35.0% | |
| CAAGTTGTCATCCTCAAAAT+GGG | + | chr1.4:32228478-32228497 | MS.gene96898:intron | 35.0% | |
| CAGAATCAAAAGAAACAGGA+TGG | - | chr1.4:32228591-32228610 | None:intergenic | 35.0% | |
| CATTTGTACACTCAACAGTA+CGG | + | chr1.4:32230789-32230808 | MS.gene96898:intron | 35.0% | |
| CGGAGTGTATGAAAATATGA+TGG | + | chr1.4:32231950-32231969 | MS.gene96898:intron | 35.0% | |
| CGTGTCATCATTATTCTGTT+AGG | + | chr1.4:32231026-32231045 | MS.gene96898:intron | 35.0% | |
| CTATAGAGTATAGACTTAGG+CGG | + | chr1.4:32227756-32227775 | MS.gene96898:intron | 35.0% | |
| CTATTTGAGAGAATACACCT+TGG | + | chr1.4:32227182-32227201 | MS.gene96898:intron | 35.0% | |
| CTGACCTTCCTTATGTTTAT+TGG | + | chr1.4:32228120-32228139 | MS.gene96898:intron | 35.0% | |
| CTTGGAAAGATGTGAGAAAA+TGG | - | chr1.4:32228944-32228963 | None:intergenic | 35.0% | |
| GAAGAAGTAGAAAGTGAAAG+AGG | + | chr1.4:32230664-32230683 | MS.gene96898:intron | 35.0% | |
| GCAACAGAATCAAAAGAAAC+AGG | - | chr1.4:32228595-32228614 | None:intergenic | 35.0% | |
| GGTATTACAGTCAAGTTTGA+GGG | - | chr1.4:32226794-32226813 | None:intergenic | 35.0% | |
| GTATTCAGATGCAAGACAAA+GGG | - | chr1.4:32231133-32231152 | None:intergenic | 35.0% | |
| GTCCTCTCTTAGATAAAACT+AGG | - | chr1.4:32227807-32227826 | None:intergenic | 35.0% | |
| GTTTATCTCTACCAATTTCG+AGG | + | chr1.4:32228909-32228928 | MS.gene96898:intron | 35.0% | |
| TAAAAGATAACTGAGCTTGC+AGG | - | chr1.4:32228620-32228639 | None:intergenic | 35.0% | |
| TAAACCCAAAAGCAAAAAGC+TGG | - | chr1.4:32228894-32228913 | None:intergenic | 35.0% | |
| TAACTCATTTCCTGCTTGTA+TGG | + | chr1.4:32232162-32232181 | MS.gene96898:intron | 35.0% | |
| TATTCTGTTAGGACCTATAG+TGG | + | chr1.4:32231037-32231056 | MS.gene96898:intron | 35.0% | |
| TCAAGTTTGAGGGATTGAAA+AGG | - | chr1.4:32226784-32226803 | None:intergenic | 35.0% | |
| TCATCTTTATCGCACTAGTT+TGG | - | chr1.4:32232011-32232030 | None:intergenic | 35.0% | |
| TCTCTTCAATAACAGGAAAG+AGG | + | chr1.4:32227868-32227887 | MS.gene96898:intron | 35.0% | |
| TGAAACAAAACTCACTTGCA+GGG | - | chr1.4:32229553-32229572 | None:intergenic | 35.0% | |
| TGGTATTACAGTCAAGTTTG+AGG | - | chr1.4:32226795-32226814 | None:intergenic | 35.0% | |
| TGTATTCAGATGCAAGACAA+AGG | - | chr1.4:32231134-32231153 | None:intergenic | 35.0% | |
| TGTCCTATATGTTGCATTCA+TGG | - | chr1.4:32230375-32230394 | None:intergenic | 35.0% | |
| TTAGGCGGACAAACAAAATT+GGG | + | chr1.4:32227771-32227790 | MS.gene96898:intron | 35.0% | |
| TTGCATATGTTGCATAGTGT+TGG | + | chr1.4:32228673-32228692 | MS.gene96898:intron | 35.0% | |
| TTTCACAAGTGCAAGAGATT+TGG | - | chr1.4:32232450-32232469 | None:intergenic | 35.0% | |
| TTTGAGGGATTGAAAAGGAA+TGG | - | chr1.4:32226779-32226798 | None:intergenic | 35.0% | |
| TTTGTAGTACCTGAATTGCA+AGG | + | chr1.4:32226936-32226955 | MS.gene96898:intron | 35.0% | |
| TTTGTTTGTGGCAAGGTTAA+AGG | + | chr1.4:32227259-32227278 | MS.gene96898:intron | 35.0% | |
| ! | AAATAGTTTGGTGACAAGAG+AGG | - | chr1.4:32231243-32231262 | None:intergenic | 35.0% |
| ! | AAATCCAGTAGACTTGGTTA+TGG | + | chr1.4:32229469-32229488 | MS.gene96898:intron | 35.0% |
| ! | AATAGTTTGGTGACAAGAGA+GGG | - | chr1.4:32231242-32231261 | None:intergenic | 35.0% |
| ! | AATCCTTTTTCCTTCTAAGC+TGG | + | chr1.4:32228781-32228800 | MS.gene96898:intron | 35.0% |
| ! | AGAATCTTTTCTCTCTTCTG+AGG | + | chr1.4:32231071-32231090 | MS.gene96898:intron | 35.0% |
| ! | AGGTTGTTTGGGTTTATTTC+GGG | - | chr1.4:32230901-32230920 | None:intergenic | 35.0% |
| ! | AGTGAACCTATCACATTTTC+AGG | + | chr1.4:32231826-32231845 | MS.gene96898:CDS | 35.0% |
| ! | CACCTTGGTTGTATGATTTT+AGG | + | chr1.4:32227197-32227216 | MS.gene96898:intron | 35.0% |
| ! | CCTCTGGTTTAAAACTCATT+TGG | + | chr1.4:32227132-32227151 | MS.gene96898:intron | 35.0% |
| ! | CTCATTCTTTGAGCAACTTT+TGG | - | chr1.4:32230757-32230776 | None:intergenic | 35.0% |
| ! | GAGGTTGTTTGGGTTTATTT+CGG | - | chr1.4:32230902-32230921 | None:intergenic | 35.0% |
| ! | GATGCATTGATAACCAAAAC+AGG | - | chr1.4:32231211-32231230 | None:intergenic | 35.0% |
| ! | GTGTTTTCAATGACAGATAG+CGG | - | chr1.4:32230049-32230068 | None:intergenic | 35.0% |
| ! | GTTATGCCTCGTTGAAATTT+TGG | + | chr1.4:32229377-32229396 | MS.gene96898:intron | 35.0% |
| ! | TAACTTCCGTGTTGATGAAA+TGG | + | chr1.4:32228503-32228522 | MS.gene96898:intron | 35.0% |
| ! | TTTTTCCTTCTAAGCTGGAT+TGG | + | chr1.4:32228786-32228805 | MS.gene96898:intron | 35.0% |
| !! | ATAGCCATCAGGTTGAAAAA+TGG | - | chr1.4:32232237-32232256 | None:intergenic | 35.0% |
| !! | ATTTTTGTTGTAGGACGTTG+TGG | + | chr1.4:32228721-32228740 | MS.gene96898:intron | 35.0% |
| !! | CACATTTTCAGGAAAAACAC+TGG | + | chr1.4:32231837-32231856 | MS.gene96898:CDS | 35.0% |
| !! | TAGCCATCAGGTTGAAAAAT+GGG | - | chr1.4:32232236-32232255 | None:intergenic | 35.0% |
| !! | TTTCCCAGCTTTTTGCTTTT+GGG | + | chr1.4:32228887-32228906 | MS.gene96898:intron | 35.0% |
| !!! | CCAAATGAGTTTTAAACCAG+AGG | - | chr1.4:32227135-32227154 | None:intergenic | 35.0% |
| !!! | GAGTTTTAAACCAGAGGTTA+GGG | - | chr1.4:32227129-32227148 | None:intergenic | 35.0% |
| !!! | GTCCTCAGATTTTTAGTTCT+TGG | + | chr1.4:32231671-32231690 | MS.gene96898:intron | 35.0% |
| !!! | TCCCTAGTTTTATCTAAGAG+AGG | + | chr1.4:32227802-32227821 | MS.gene96898:intron | 35.0% |
| !!! | TGAGTTTTAAACCAGAGGTT+AGG | - | chr1.4:32227130-32227149 | None:intergenic | 35.0% |
| AAACCTTTGATGTTGAGGGT+TGG | + | chr1.4:32230311-32230330 | MS.gene96898:intron | 40.0% | |
| AAAGATAACTGAGCTTGCAG+GGG | - | chr1.4:32228618-32228637 | None:intergenic | 40.0% | |
| AAAGCCATAACCAAGTCTAC+TGG | - | chr1.4:32229476-32229495 | None:intergenic | 40.0% | |
| AAAGCTGGCATTGTACATCT+TGG | + | chr1.4:32227371-32227390 | MS.gene96898:intron | 40.0% | |
| AACCACCTAAATCACTCAAC+AGG | - | chr1.4:32228239-32228258 | None:intergenic | 40.0% | |
| AACCTTCATGACCAATCTTC+TGG | - | chr1.4:32231624-32231643 | None:intergenic | 40.0% | |
| AAGTAGAAAGTGAAAGAGGG+AGG | + | chr1.4:32230668-32230687 | MS.gene96898:intron | 40.0% | |
| AAGTATGGAGAGTCGATGAA+AGG | + | chr1.4:32230642-32230661 | MS.gene96898:intron | 40.0% | |
| AAGTTGTGTAGGCTAAGGAT+TGG | + | chr1.4:32230997-32231016 | MS.gene96898:intron | 40.0% | |
| AATAACAGGAAAGAGGCAGA+CGG | + | chr1.4:32227875-32227894 | MS.gene96898:intron | 40.0% | |
| AATCCAACCCTCAACATCAA+AGG | - | chr1.4:32230317-32230336 | None:intergenic | 40.0% | |
| AATCCTTAGCCTACACAACT+TGG | - | chr1.4:32230998-32231017 | None:intergenic | 40.0% | |
| AATGTGAACATGAGCAACAG+GGG | + | chr1.4:32230822-32230841 | MS.gene96898:intron | 40.0% | |
| ACTATTTGGACCGATTGCAA+AGG | - | chr1.4:32231809-32231828 | None:intergenic | 40.0% | |
| ACTGGAACATCCTAACTACA+TGG | - | chr1.4:32230713-32230732 | None:intergenic | 40.0% | |
| AGCTATGGAGGACAATTTGA+TGG | - | chr1.4:32229015-32229034 | None:intergenic | 40.0% | |
| AGGTCTCAACAATCTGTTGA+TGG | + | chr1.4:32231744-32231763 | MS.gene96898:intron | 40.0% | |
| AGTAGAAAGTGAAAGAGGGA+GGG | + | chr1.4:32230669-32230688 | MS.gene96898:intron | 40.0% | |
| ATAAAGACCACCTGAGTACA+AGG | - | chr1.4:32227466-32227485 | None:intergenic | 40.0% | |
| ATCCTGTTGAGTGATTTAGG+TGG | + | chr1.4:32228234-32228253 | MS.gene96898:intron | 40.0% | |
| ATGTCAACATTCTTGTCCAG+TGG | - | chr1.4:32229788-32229807 | None:intergenic | 40.0% | |
| CAAGTGTCTTCAACCAAAAC+AGG | - | chr1.4:32227286-32227305 | None:intergenic | 40.0% | |
| CAATGTGAACATGAGCAACA+GGG | + | chr1.4:32230821-32230840 | MS.gene96898:intron | 40.0% | |
| CTATAAAATCTGCTGCCTCT+GGG | + | chr1.4:32226674-32226693 | MS.gene96898:CDS | 40.0% | |
| CTCAGCTCCCAATAAACATA+AGG | - | chr1.4:32228131-32228150 | None:intergenic | 40.0% | |
| CTCTGTTTCAATGCCTTGAA+GGG | + | chr1.4:32227307-32227326 | MS.gene96898:CDS | 40.0% | |
| CTTAGGCGGACAAACAAAAT+TGG | + | chr1.4:32227770-32227789 | MS.gene96898:intron | 40.0% | |
| CTTATGTTTATTGGGAGCTG+AGG | + | chr1.4:32228129-32228148 | MS.gene96898:intron | 40.0% | |
| GACAGGATAAACCCAAAGTA+TGG | + | chr1.4:32230627-32230646 | MS.gene96898:intron | 40.0% | |
| GAGATCCAAGCTCATTTAAC+TGG | - | chr1.4:32230731-32230750 | None:intergenic | 40.0% | |
| GATGCTTTGTCATGTCATTG+TGG | + | chr1.4:32227992-32228011 | MS.gene96898:intron | 40.0% | |
| GATGGCTATTGAGGTTGTTT+GGG | - | chr1.4:32230912-32230931 | None:intergenic | 40.0% | |
| GCTCCCAATAAACATAAGGA+AGG | - | chr1.4:32228127-32228146 | None:intergenic | 40.0% | |
| GGATCCCATCCAAAATCATT+GGG | - | chr1.4:32232215-32232234 | None:intergenic | 40.0% | |
| GGGCATAACCAATGCATAAA+AGG | - | chr1.4:32229767-32229786 | None:intergenic | 40.0% | |
| GTCATTGTGGTAGACATCTT+CGG | + | chr1.4:32228005-32228024 | MS.gene96898:intron | 40.0% | |
| GTTGGAGATATGGTAGGAAA+TGG | + | chr1.4:32227608-32227627 | MS.gene96898:intron | 40.0% | |
| GTTGTTGATACTGTGAAAGC+TGG | + | chr1.4:32227356-32227375 | MS.gene96898:intron | 40.0% | |
| TACGTTTGATCATAGCCATC+AGG | - | chr1.4:32232248-32232267 | None:intergenic | 40.0% | |
| TAGTAAGAGGAAATGAGACG+AGG | + | chr1.4:32228184-32228203 | MS.gene96898:intron | 40.0% | |
| TCGTCTCATTTCCTCTTACT+AGG | - | chr1.4:32228185-32228204 | None:intergenic | 40.0% | |
| TCTCAAATAGGTAGCTCGTT+TGG | - | chr1.4:32227172-32227191 | None:intergenic | 40.0% | |
| TGAGGGTTCTCTTCAATAAC+AGG | + | chr1.4:32227861-32227880 | MS.gene96898:intron | 40.0% | |
| TGATGGCTATTGAGGTTGTT+TGG | - | chr1.4:32230913-32230932 | None:intergenic | 40.0% | |
| TGGCAATAACAGTCAGATTG+TGG | + | chr1.4:32229316-32229335 | MS.gene96898:intron | 40.0% | |
| TGTCAACATTCTTGTCCAGT+GGG | - | chr1.4:32229787-32229806 | None:intergenic | 40.0% | |
| TTATCTAAGAGAGGACAGAC+TGG | + | chr1.4:32227811-32227830 | MS.gene96898:intron | 40.0% | |
| TTTCCGGTAACAAAGGTAAC+CGG | - | chr1.4:32226715-32226734 | None:intergenic | 40.0% | |
| TTTGGCATTTCCGGTAACAA+AGG | - | chr1.4:32226722-32226741 | None:intergenic | 40.0% | |
| ! | AAATCACATTTTGCTGCAGC+TGG | + | chr1.4:32232467-32232486 | MS.gene96898:CDS | 40.0% |
| ! | AAGTTGGTTGGAGATATGGT+AGG | + | chr1.4:32227602-32227621 | MS.gene96898:intron | 40.0% |
| ! | AGCTAAACGAGCCTTTTCTT+TGG | - | chr1.4:32226979-32226998 | None:intergenic | 40.0% |
| ! | AGGACCCAATGATTTTGGAT+GGG | + | chr1.4:32232208-32232227 | MS.gene96898:CDS | 40.0% |
| ! | ATAGTTTGGTGACAAGAGAG+GGG | - | chr1.4:32231241-32231260 | None:intergenic | 40.0% |
| ! | CAAGGTTAAAGGACCTGTTT+TGG | + | chr1.4:32227270-32227289 | MS.gene96898:intron | 40.0% |
| ! | CATATTCTGTCTCCCTGTTT+TGG | + | chr1.4:32231195-32231214 | MS.gene96898:intron | 40.0% |
| ! | CGGAAGTTATACCCATTTTG+AGG | - | chr1.4:32228492-32228511 | None:intergenic | 40.0% |
| ! | CTCAAAGTTGGTTGGAGATA+TGG | + | chr1.4:32227598-32227617 | MS.gene96898:intron | 40.0% |
| ! | GAAGATTGGTCATGAAGGTT+AGG | + | chr1.4:32231624-32231643 | MS.gene96898:intron | 40.0% |
| ! | GCACTGATCCTTACAGAAAA+TGG | - | chr1.4:32228328-32228347 | None:intergenic | 40.0% |
| ! | GTTTCCCAGCTTTTTGCTTT+TGG | + | chr1.4:32228886-32228905 | MS.gene96898:intron | 40.0% |
| ! | TTTATCGCACTAGTTTGGTC+AGG | - | chr1.4:32232006-32232025 | None:intergenic | 40.0% |
| !! | ACTACTGGCTTATAGTCACT+TGG | - | chr1.4:32228962-32228981 | None:intergenic | 40.0% |
| !! | CTCAAGCTTTTTGGCATTTC+CGG | - | chr1.4:32226731-32226750 | None:intergenic | 40.0% |
| !! | GAATTTGTGACTCGGTCATA+CGG | + | chr1.4:32227970-32227989 | MS.gene96898:intron | 40.0% |
| !! | GATCCCATTTTTCAACCTGA+TGG | + | chr1.4:32232230-32232249 | MS.gene96898:CDS | 40.0% |
| !! | GTTGTGCCACTATCTGTTTT+GGG | + | chr1.4:32229682-32229701 | MS.gene96898:intron | 40.0% |
| !! | TAAAAGAAAGCACCCTTGCT+GGG | - | chr1.4:32228291-32228310 | None:intergenic | 40.0% |
| !! | TCATCGACTCTCCATACTTT+GGG | - | chr1.4:32230641-32230660 | None:intergenic | 40.0% |
| !! | TGTTGTGCCACTATCTGTTT+TGG | + | chr1.4:32229681-32229700 | MS.gene96898:intron | 40.0% |
| !! | TTCATCGACTCTCCATACTT+TGG | - | chr1.4:32230642-32230661 | None:intergenic | 40.0% |
| AAATCATTGGGTCCTCTTGC+AGG | - | chr1.4:32232203-32232222 | None:intergenic | 45.0% | |
| AAATGAGACGAGGTTTGAGG+GGG | + | chr1.4:32228194-32228213 | MS.gene96898:intron | 45.0% | |
| AAGATAACTGAGCTTGCAGG+GGG | - | chr1.4:32228617-32228636 | None:intergenic | 45.0% | |
| ACACAACTTGGCATCAGAGT+CGG | - | chr1.4:32230986-32231005 | None:intergenic | 45.0% | |
| ACACGATATTCCCAAGACTC+AGG | - | chr1.4:32229342-32229361 | None:intergenic | 45.0% | |
| ACTCTGATGCCAAGTTGTGT+AGG | + | chr1.4:32230986-32231005 | MS.gene96898:intron | 45.0% | |
| AGCATGCAACATCCAGTGAA+TGG | - | chr1.4:32229043-32229062 | None:intergenic | 45.0% | |
| AGGAAATGAGACGAGGTTTG+AGG | + | chr1.4:32228191-32228210 | MS.gene96898:intron | 45.0% | |
| ATAACAGGAAAGAGGCAGAC+GGG | + | chr1.4:32227876-32227895 | MS.gene96898:intron | 45.0% | |
| ATGCCAAGTTGTGTAGGCTA+AGG | + | chr1.4:32230992-32231011 | MS.gene96898:intron | 45.0% | |
| ATGTGCCAATCCAGCTTAGA+AGG | - | chr1.4:32228794-32228813 | None:intergenic | 45.0% | |
| ATTTCCTGCTTGTATGGCAG+GGG | + | chr1.4:32232168-32232187 | MS.gene96898:intron | 45.0% | |
| CAAGTGCAAGAGATTTGGAG+CGG | - | chr1.4:32232445-32232464 | None:intergenic | 45.0% | |
| CACCTGAGTACAAGGATTCA+GGG | - | chr1.4:32227458-32227477 | None:intergenic | 45.0% | |
| CATTTCCTGCTTGTATGGCA+GGG | + | chr1.4:32232167-32232186 | MS.gene96898:intron | 45.0% | |
| CCTCTGTTTCAATGCCTTGA+AGG | + | chr1.4:32227306-32227325 | MS.gene96898:CDS | 45.0% | |
| CGGAAATGCCAAAAAGCTTG+AGG | + | chr1.4:32226729-32226748 | MS.gene96898:CDS | 45.0% | |
| CTGTTAGGACCTATAGTGGT+AGG | + | chr1.4:32231041-32231060 | MS.gene96898:intron | 45.0% | |
| GAAAGATTGTGGGGATAGAG+TGG | - | chr1.4:32226815-32226834 | None:intergenic | 45.0% | |
| GAAATGAGACGAGGTTTGAG+GGG | + | chr1.4:32228193-32228212 | MS.gene96898:intron | 45.0% | |
| GCAATGTGAACATGAGCAAC+AGG | + | chr1.4:32230820-32230839 | MS.gene96898:intron | 45.0% | |
| GCTATAAAATCTGCTGCCTC+TGG | + | chr1.4:32226673-32226692 | MS.gene96898:CDS | 45.0% | |
| GGAAATGAGACGAGGTTTGA+GGG | + | chr1.4:32228192-32228211 | MS.gene96898:intron | 45.0% | |
| GGGATCCCATCCAAAATCAT+TGG | - | chr1.4:32232216-32232235 | None:intergenic | 45.0% | |
| GTAGCAGAGTTTCAGTGTAG+TGG | + | chr1.4:32229296-32229315 | MS.gene96898:intron | 45.0% | |
| GTAGCTGCTCTTCTATGCTA+TGG | - | chr1.4:32229256-32229275 | None:intergenic | 45.0% | |
| TAGCATAGAAGAGCAGCTAC+TGG | + | chr1.4:32229256-32229275 | MS.gene96898:intron | 45.0% | |
| TCATTTCCTGCTTGTATGGC+AGG | + | chr1.4:32232166-32232185 | MS.gene96898:intron | 45.0% | |
| TGAGGAAATGATGAAGGCCT+TGG | + | chr1.4:32228147-32228166 | MS.gene96898:intron | 45.0% | |
| TGTTCTTGTGGGCTTATGAC+AGG | + | chr1.4:32230610-32230629 | MS.gene96898:intron | 45.0% | |
| TTCAGATGCAAGACAAAGGG+AGG | - | chr1.4:32231130-32231149 | None:intergenic | 45.0% | |
| TTGCCATGACTAAGAGAGGA+GGG | - | chr1.4:32229709-32229728 | None:intergenic | 45.0% | |
| TTTGGTCTCTTTCCCAGCAA+GGG | + | chr1.4:32228276-32228295 | MS.gene96898:intron | 45.0% | |
| ! | CAGATAGTGGCACAACACAA+AGG | - | chr1.4:32229678-32229697 | None:intergenic | 45.0% |
| ! | CTCCAGAAGATTGGTCATGA+AGG | + | chr1.4:32231619-32231638 | MS.gene96898:CDS | 45.0% |
| ! | GAGGACCCAATGATTTTGGA+TGG | + | chr1.4:32232207-32232226 | MS.gene96898:CDS | 45.0% |
| ! | GCAAGAGGACCCAATGATTT+TGG | + | chr1.4:32232203-32232222 | MS.gene96898:CDS | 45.0% |
| ! | GCGAACTTCCTCAAGCTTTT+TGG | - | chr1.4:32226740-32226759 | None:intergenic | 45.0% |
| ! | TAGTTTGGTGACAAGAGAGG+GGG | - | chr1.4:32231240-32231259 | None:intergenic | 45.0% |
| !! | CCTTCAAGGCATTGAAACAG+AGG | - | chr1.4:32227309-32227328 | None:intergenic | 45.0% |
| !! | CTAAAAGAAAGCACCCTTGC+TGG | - | chr1.4:32228292-32228311 | None:intergenic | 45.0% |
| !! | CTTGTGATTGGCCTAGTAAG+AGG | + | chr1.4:32228171-32228190 | MS.gene96898:intron | 45.0% |
| !! | GGGAGGGTATTGAGTTTGTT+TGG | - | chr1.4:32230851-32230870 | None:intergenic | 45.0% |
| !! | GTTGCATAGTGTTGGTTCAG+TGG | + | chr1.4:32228681-32228700 | MS.gene96898:intron | 45.0% |
| !! | TATGCATTGGTTATGCCCAC+TGG | + | chr1.4:32229769-32229788 | MS.gene96898:intron | 45.0% |
| !! | AATATTTATTTATGTTTATT+AGG | + | chr1.4:32227658-32227677 | MS.gene96898:intron | 5.0% |
| !! | GAAAAAAAAAAAAAAAAAAA+AGG | - | chr1.4:32227935-32227954 | None:intergenic | 5.0% |
| !!! | TGAATTTTTTTTTTTTTTTT+TGG | - | chr1.4:32232310-32232329 | None:intergenic | 5.0% |
| AAAATCTGCTGCCTCTGGGT+TGG | + | chr1.4:32226678-32226697 | MS.gene96898:CDS | 50.0% | |
| AACAGGAGGGGATGTTCTTG+TGG | + | chr1.4:32230598-32230617 | MS.gene96898:intron | 50.0% | |
| AATGAGACGAGGTTTGAGGG+GGG | + | chr1.4:32228195-32228214 | MS.gene96898:intron | 50.0% | |
| AATGCCTTGAAGGGTCTTCC+AGG | + | chr1.4:32227316-32227335 | MS.gene96898:CDS | 50.0% | |
| ACAAGAACATCCCCTCCTGT+TGG | - | chr1.4:32230599-32230618 | None:intergenic | 50.0% | |
| ACAGGAGGGGATGTTCTTGT+GGG | + | chr1.4:32230599-32230618 | MS.gene96898:intron | 50.0% | |
| ACGCCTTGTGTGGGTCAATA+TGG | + | chr1.4:32230873-32230892 | MS.gene96898:intron | 50.0% | |
| AGGAATGGAGTGACCCAAGA+TGG | - | chr1.4:32226764-32226783 | None:intergenic | 50.0% | |
| ATCCACACTTGGCGTGATGA+TGG | - | chr1.4:32230930-32230949 | None:intergenic | 50.0% | |
| ATGGTTCGAACCCTAACCTC+TGG | + | chr1.4:32227116-32227135 | MS.gene96898:intron | 50.0% | |
| CACAACTTGGCATCAGAGTC+GGG | - | chr1.4:32230985-32231004 | None:intergenic | 50.0% | |
| CACCCTGAATCCTTGTACTC+AGG | + | chr1.4:32227453-32227472 | MS.gene96898:intron | 50.0% | |
| CAGATTGTGGCCTGAGTCTT+GGG | + | chr1.4:32229329-32229348 | MS.gene96898:intron | 50.0% | |
| CAGTGAATGGACAGCAGCTA+TGG | - | chr1.4:32229030-32229049 | None:intergenic | 50.0% | |
| CATAGCTGCTGTCCATTCAC+TGG | + | chr1.4:32229028-32229047 | MS.gene96898:intron | 50.0% | |
| CCACCTGAGTACAAGGATTC+AGG | - | chr1.4:32227459-32227478 | None:intergenic | 50.0% | |
| CCTGAATCCTTGTACTCAGG+TGG | + | chr1.4:32227456-32227475 | MS.gene96898:intron | 50.0% | |
| CGCCTTGTGTGGGTCAATAT+GGG | + | chr1.4:32230874-32230893 | MS.gene96898:intron | 50.0% | |
| CGTCCGGTTACCTTTGTTAC+CGG | + | chr1.4:32226709-32226728 | MS.gene96898:CDS | 50.0% | |
| CTAGGCCAATCACAAGTCCA+AGG | - | chr1.4:32228167-32228186 | None:intergenic | 50.0% | |
| CTCTCTCTGCCTACCACTAT+AGG | - | chr1.4:32231053-32231072 | None:intergenic | 50.0% | |
| GAAGGCCTTGGACTTGTGAT+TGG | + | chr1.4:32228159-32228178 | MS.gene96898:intron | 50.0% | |
| GCTGTTGCCATGACTAAGAG+AGG | - | chr1.4:32229713-32229732 | None:intergenic | 50.0% | |
| GGCTCGTTTAGCTGCTATTC+AGG | + | chr1.4:32226986-32227005 | MS.gene96898:CDS | 50.0% | |
| GGGAAGATTGTTCCTGCAAG+AGG | + | chr1.4:32232188-32232207 | MS.gene96898:CDS | 50.0% | |
| GGGAGCTGAGGAAATGATGA+AGG | + | chr1.4:32228141-32228160 | MS.gene96898:intron | 50.0% | |
| GGTCGATATGGCCTCGAAAT+TGG | - | chr1.4:32228923-32228942 | None:intergenic | 50.0% | |
| GTAACAAAGGTAACCGGACG+TGG | - | chr1.4:32226709-32226728 | None:intergenic | 50.0% | |
| GTCCCATATTGACCCACACA+AGG | - | chr1.4:32230879-32230898 | None:intergenic | 50.0% | |
| GTGAAAGAGGGAGGGAAGTA+AGG | + | chr1.4:32230677-32230696 | MS.gene96898:intron | 50.0% | |
| GTTCTGCATCTTCGACGTCT+CGG | + | chr1.4:32229606-32229625 | MS.gene96898:intron | 50.0% | |
| GTTGCCATGACTAAGAGAGG+AGG | - | chr1.4:32229710-32229729 | None:intergenic | 50.0% | |
| GTTTGGTCTCTTTCCCAGCA+AGG | + | chr1.4:32228275-32228294 | MS.gene96898:intron | 50.0% | |
| TAACAGGAAAGAGGCAGACG+GGG | + | chr1.4:32227877-32227896 | MS.gene96898:intron | 50.0% | |
| TCAACGAGGCATAACTGGTG+CGG | - | chr1.4:32229372-32229391 | None:intergenic | 50.0% | |
| TCAGATTGTGGCCTGAGTCT+TGG | + | chr1.4:32229328-32229347 | MS.gene96898:intron | 50.0% | |
| TCAGGCTCTCCTTGCAATTC+AGG | - | chr1.4:32226948-32226967 | None:intergenic | 50.0% | |
| TCTAAGAGAGGACAGACTGG+AGG | + | chr1.4:32227814-32227833 | MS.gene96898:intron | 50.0% | |
| TCTACCTGGAAGACCCTTCA+AGG | - | chr1.4:32227323-32227342 | None:intergenic | 50.0% | |
| TGAATGGACAGCAGCTATGG+AGG | - | chr1.4:32229027-32229046 | None:intergenic | 50.0% | |
| TGCCATGACTAAGAGAGGAG+GGG | - | chr1.4:32229708-32229727 | None:intergenic | 50.0% | |
| TGCTACTGCGCTACTTGTAG+CGG | - | chr1.4:32229282-32229301 | None:intergenic | 50.0% | |
| TTGGCATCAGAGTCGGGTTA+AGG | - | chr1.4:32230979-32230998 | None:intergenic | 50.0% | |
| ! | TACTGGCTGGCCATGTAGTT+AGG | + | chr1.4:32230700-32230719 | MS.gene96898:intron | 50.0% |
| ! | TTCTCTCTTCTGAGGAGCCT+TGG | + | chr1.4:32231079-32231098 | MS.gene96898:intron | 50.0% |
| !! | TGGCGTGATGATGGCTATTG+AGG | - | chr1.4:32230921-32230940 | None:intergenic | 50.0% |
| AACATCCCCTCCTGTTGGAC+TGG | - | chr1.4:32230594-32230613 | None:intergenic | 55.0% | |
| ACATCCCCTCCTGTTGGACT+GGG | - | chr1.4:32230593-32230612 | None:intergenic | 55.0% | |
| AGCCATCATCACGCCAAGTG+TGG | + | chr1.4:32230925-32230944 | MS.gene96898:intron | 55.0% | |
| ATCACGCCAAGTGTGGATCC+TGG | + | chr1.4:32230932-32230951 | MS.gene96898:intron | 55.0% | |
| ATGAGCCCAGTCCAACAGGA+GGG | + | chr1.4:32230585-32230604 | MS.gene96898:intron | 55.0% | |
| ATTGACCCACACAAGGCGTG+AGG | - | chr1.4:32230872-32230891 | None:intergenic | 55.0% | |
| GAGAGGACAGACTGGAGGTT+AGG | + | chr1.4:32227819-32227838 | MS.gene96898:intron | 55.0% | |
| GAGGAAGTTCGCGCCATCTT+GGG | + | chr1.4:32226748-32226767 | MS.gene96898:CDS | 55.0% | |
| GAGGGAGGGAAGTAAGGTAC+TGG | + | chr1.4:32230683-32230702 | MS.gene96898:intron | 55.0% | |
| GAGGGGCCCAAAACAGATAG+TGG | - | chr1.4:32229691-32229710 | None:intergenic | 55.0% | |
| TATGAGCCCAGTCCAACAGG+AGG | + | chr1.4:32230584-32230603 | MS.gene96898:intron | 55.0% | |
| TCACGCCAAGTGTGGATCCT+GGG | + | chr1.4:32230933-32230952 | MS.gene96898:intron | 55.0% | |
| TCTTCCCCTGCCATACAAGC+AGG | - | chr1.4:32232175-32232194 | None:intergenic | 55.0% | |
| TGAGGAAGTTCGCGCCATCT+TGG | + | chr1.4:32226747-32226766 | MS.gene96898:CDS | 55.0% | |
| TTGACCCACACAAGGCGTGA+GGG | - | chr1.4:32230871-32230890 | None:intergenic | 55.0% | |
| TTGGACCCAGGATCCACACT+TGG | - | chr1.4:32230941-32230960 | None:intergenic | 55.0% | |
| ! | CCTGTTGGACTGGGCTCATA+CGG | - | chr1.4:32230584-32230603 | None:intergenic | 55.0% |
| ! | CTTCTGAGGAGCCTTGGCAA+TGG | + | chr1.4:32231085-32231104 | MS.gene96898:intron | 55.0% |
| !! | GAGGGAAGTAAGGTACTGGC+TGG | + | chr1.4:32230687-32230706 | MS.gene96898:intron | 55.0% |
| ACGTGGCAGTACCAACCCAG+AGG | - | chr1.4:32226692-32226711 | None:intergenic | 60.0% | |
| CCGTATGAGCCCAGTCCAAC+AGG | + | chr1.4:32230581-32230600 | MS.gene96898:intron | 60.0% | |
| GGCCCCTCCTCTCTTAGTCA+TGG | + | chr1.4:32229703-32229722 | MS.gene96898:intron | 60.0% | |
| TGAGCCCAGTCCAACAGGAG+GGG | + | chr1.4:32230586-32230605 | MS.gene96898:intron | 60.0% | |
| !! | TGGGTTGGTACTGCCACGTC+CGG | + | chr1.4:32226693-32226712 | MS.gene96898:CDS | 60.0% |
| ACCCACACAAGGCGTGAGGG+AGG | - | chr1.4:32230868-32230887 | None:intergenic | 65.0% | |
| ACCCTCCCTCACGCCTTGTG+TGG | + | chr1.4:32230863-32230882 | MS.gene96898:intron | 65.0% | |
| ACGAGGTTTGAGGGGGGTCG+TGG | + | chr1.4:32228201-32228220 | MS.gene96898:intron | 65.0% | |
| CCCACACAAGGCGTGAGGGA+GGG | - | chr1.4:32230867-32230886 | None:intergenic | 65.0% | |
| CCCTCCCTCACGCCTTGTGT+GGG | + | chr1.4:32230864-32230883 | MS.gene96898:intron | 65.0% | |
| CGAGGTTTGAGGGGGGTCGT+GGG | + | chr1.4:32228202-32228221 | MS.gene96898:intron | 65.0% | |
| GTTTGAGGGGGGTCGTGGGT+AGG | + | chr1.4:32228206-32228225 | MS.gene96898:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 32226667 | 32232508 | 32226667 | ID=MS.gene96898 |
| chr1.4 | mRNA | 32226667 | 32232508 | 32226667 | ID=MS.gene96898.t1;Parent=MS.gene96898 |
| chr1.4 | exon | 32226667 | 32226805 | 32226667 | ID=MS.gene96898.t1.exon1;Parent=MS.gene96898.t1 |
| chr1.4 | CDS | 32226667 | 32226805 | 32226667 | ID=cds.MS.gene96898.t1;Parent=MS.gene96898.t1 |
| chr1.4 | exon | 32226943 | 32227007 | 32226943 | ID=MS.gene96898.t1.exon2;Parent=MS.gene96898.t1 |
| chr1.4 | CDS | 32226943 | 32227007 | 32226943 | ID=cds.MS.gene96898.t1;Parent=MS.gene96898.t1 |
| chr1.4 | exon | 32227274 | 32227337 | 32227274 | ID=MS.gene96898.t1.exon3;Parent=MS.gene96898.t1 |
| chr1.4 | CDS | 32227274 | 32227337 | 32227274 | ID=cds.MS.gene96898.t1;Parent=MS.gene96898.t1 |
| chr1.4 | exon | 32230579 | 32230588 | 32230579 | ID=MS.gene96898.t1.exon4;Parent=MS.gene96898.t1 |
| chr1.4 | CDS | 32230579 | 32230588 | 32230579 | ID=cds.MS.gene96898.t1;Parent=MS.gene96898.t1 |
| chr1.4 | exon | 32231609 | 32231640 | 32231609 | ID=MS.gene96898.t1.exon5;Parent=MS.gene96898.t1 |
| chr1.4 | CDS | 32231609 | 32231640 | 32231609 | ID=cds.MS.gene96898.t1;Parent=MS.gene96898.t1 |
| chr1.4 | exon | 32231746 | 32231858 | 32231746 | ID=MS.gene96898.t1.exon6;Parent=MS.gene96898.t1 |
| chr1.4 | CDS | 32231746 | 32231858 | 32231746 | ID=cds.MS.gene96898.t1;Parent=MS.gene96898.t1 |
| chr1.4 | exon | 32232188 | 32232264 | 32232188 | ID=MS.gene96898.t1.exon7;Parent=MS.gene96898.t1 |
| chr1.4 | CDS | 32232188 | 32232264 | 32232188 | ID=cds.MS.gene96898.t1;Parent=MS.gene96898.t1 |
| chr1.4 | exon | 32232400 | 32232508 | 32232400 | ID=MS.gene96898.t1.exon8;Parent=MS.gene96898.t1 |
| chr1.4 | CDS | 32232400 | 32232508 | 32232400 | ID=cds.MS.gene96898.t1;Parent=MS.gene96898.t1 |
| Gene Sequence |
| Protein sequence |
