Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96906.t1 | XP_013467214.1 | 99.1 | 462 | 4 | 0 | 1 | 462 | 1 | 462 | 2.00E-254 | 887.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96906.t1 | Q56WD9 | 84.4 | 463 | 70 | 2 | 1 | 462 | 1 | 462 | 1.3e-220 | 766.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96906.t1 | A0A072VIH3 | 99.1 | 462 | 4 | 0 | 1 | 462 | 1 | 462 | 1.5e-254 | 887.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052500 | MS.gene96906 | 0.818391 | 2.01E-52 | -1.69E-46 |
MS.gene052502 | MS.gene96906 | 0.823273 | 1.51E-53 | -1.69E-46 |
MS.gene052826 | MS.gene96906 | 0.819847 | 9.37E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene96906 | MS.gene062514 | PPI |
MS.gene96250 | MS.gene96906 | PPI |
MS.gene38144 | MS.gene96906 | PPI |
MS.gene020954 | MS.gene96906 | PPI |
MS.gene05839 | MS.gene96906 | PPI |
MS.gene004403 | MS.gene96906 | PPI |
MS.gene96906 | MS.gene57887 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96906.t1 | MTR_1g047210 | 99.134 | 462 | 4 | 0 | 1 | 462 | 1 | 462 | 0.0 | 934 |
MS.gene96906.t1 | MTR_4g022430 | 77.551 | 441 | 92 | 2 | 1 | 441 | 1 | 434 | 0.0 | 695 |
MS.gene96906.t1 | MTR_4g134090 | 34.559 | 408 | 228 | 10 | 52 | 438 | 7 | 396 | 1.49e-59 | 201 |
MS.gene96906.t1 | MTR_4g134090 | 34.559 | 408 | 228 | 10 | 52 | 438 | 14 | 403 | 2.31e-59 | 200 |
MS.gene96906.t1 | MTR_5g098310 | 33.687 | 377 | 227 | 7 | 52 | 414 | 16 | 383 | 4.35e-54 | 186 |
MS.gene96906.t1 | MTR_0449s0040 | 31.778 | 343 | 211 | 7 | 52 | 380 | 16 | 349 | 1.89e-39 | 145 |
MS.gene96906.t1 | MTR_4g134090 | 30.534 | 262 | 145 | 9 | 52 | 292 | 7 | 252 | 3.94e-20 | 90.9 |
MS.gene96906.t1 | MTR_0837s0020 | 35.135 | 111 | 72 | 0 | 60 | 170 | 808 | 918 | 2.56e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96906.t1 | AT2G33150 | 84.449 | 463 | 70 | 2 | 1 | 462 | 1 | 462 | 0.0 | 794 |
MS.gene96906.t1 | AT1G04710 | 81.596 | 451 | 74 | 2 | 1 | 451 | 1 | 442 | 0.0 | 745 |
MS.gene96906.t1 | AT5G48880 | 71.806 | 454 | 120 | 3 | 1 | 450 | 1 | 450 | 0.0 | 670 |
MS.gene96906.t1 | AT5G48880 | 71.806 | 454 | 120 | 3 | 1 | 450 | 1 | 450 | 0.0 | 670 |
MS.gene96906.t1 | AT5G48880 | 71.806 | 454 | 120 | 3 | 1 | 450 | 1 | 450 | 0.0 | 670 |
MS.gene96906.t1 | AT5G48880 | 75.862 | 406 | 96 | 1 | 47 | 450 | 2 | 407 | 0.0 | 646 |
MS.gene96906.t1 | AT5G48230 | 36.220 | 381 | 212 | 9 | 52 | 414 | 7 | 374 | 3.73e-60 | 202 |
MS.gene96906.t1 | AT5G48230 | 36.220 | 381 | 212 | 9 | 52 | 414 | 12 | 379 | 4.33e-60 | 202 |
MS.gene96906.t1 | AT5G47720 | 34.595 | 370 | 216 | 9 | 84 | 438 | 45 | 403 | 1.70e-58 | 198 |
MS.gene96906.t1 | AT5G47720 | 34.595 | 370 | 216 | 9 | 84 | 438 | 45 | 403 | 1.70e-58 | 198 |
MS.gene96906.t1 | AT5G47720 | 34.595 | 370 | 216 | 9 | 84 | 438 | 45 | 403 | 2.27e-58 | 197 |
MS.gene96906.t1 | AT5G47720 | 34.595 | 370 | 216 | 9 | 84 | 438 | 45 | 403 | 2.27e-58 | 197 |
MS.gene96906.t1 | AT5G47720 | 34.595 | 370 | 216 | 9 | 84 | 438 | 52 | 410 | 3.19e-58 | 197 |
Find 116 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTACGGCAATATACAAAT+TGG | 0.219351 | 1.4:+31784941 | None:intergenic |
CCATTGGAAGGAGGCAGTTT+TGG | 0.225837 | 1.4:+31787315 | None:intergenic |
TACCCATTCTTGGTGTATTC+AGG | 0.235250 | 1.4:-31786670 | MS.gene96906:intron |
CTGATGTAGCTGCTGCTATA+AGG | 0.320959 | 1.4:-31787661 | MS.gene96906:CDS |
TTCACAGGCTTCAGCATGTT+TGG | 0.320972 | 1.4:-31788335 | MS.gene96906:intron |
GTAAATACCTTGGTGGAAAC+TGG | 0.328197 | 1.4:+31787062 | None:intergenic |
ATTGTTGTCGGTTCTGTATT+GGG | 0.330737 | 1.4:-31787881 | MS.gene96906:CDS |
GAAAAGGTTGTCCCCTTTGC+GGG | 0.341498 | 1.4:+31784167 | None:intergenic |
GCGGCTGCTGCTACTGCTGC+TGG | 0.346344 | 1.4:-31787107 | MS.gene96906:CDS |
CGTGGCAAGGACTGCCGATA+TGG | 0.352522 | 1.4:-31784369 | MS.gene96906:CDS |
AATGGCAATTGGGCATCCTT+TGG | 0.353600 | 1.4:-31784875 | MS.gene96906:CDS |
TATCACAGGACAGCTGCATT+TGG | 0.360508 | 1.4:-31788295 | MS.gene96906:CDS |
ATCACAGGACAGCTGCATTT+GGG | 0.364031 | 1.4:-31788294 | MS.gene96906:CDS |
CCTGCAGCTTTCACGGCAAC+TGG | 0.367782 | 1.4:+31785099 | None:intergenic |
CTCTAGACCTGCAGCTTTCA+CGG | 0.369475 | 1.4:+31785092 | None:intergenic |
AACGGAGGTGCAATGGCAAT+TGG | 0.374137 | 1.4:-31784886 | MS.gene96906:CDS |
TTTAGGTATTGGTGCTGGTT+TGG | 0.375411 | 1.4:-31787541 | MS.gene96906:intron |
GAAAATGTTGCCAATCGCTT+TGG | 0.377320 | 1.4:-31787281 | MS.gene96906:CDS |
CAAAAGGGGCTACCCATTCT+TGG | 0.386260 | 1.4:-31786680 | MS.gene96906:CDS |
TATTGTTGTCGGTTCTGTAT+TGG | 0.386914 | 1.4:-31787882 | MS.gene96906:CDS |
GTTAACAGACAATGTTCATC+TGG | 0.392525 | 1.4:-31787698 | MS.gene96906:CDS |
GCAACTGGAATTGCAGCAGC+TGG | 0.400400 | 1.4:+31785114 | None:intergenic |
CTAATTCTAGCGAGCATCCT+TGG | 0.404438 | 1.4:+31784140 | None:intergenic |
GGGCATCCTTTGGGAGCAAC+AGG | 0.407923 | 1.4:-31784865 | MS.gene96906:intron |
ATGGCAATTGGGCATCCTTT+GGG | 0.407928 | 1.4:-31784874 | MS.gene96906:CDS |
ATAAATAAAACCTTCAAAAC+AGG | 0.414760 | 1.4:+31788038 | None:intergenic |
TTGTGAGCAGGTACTGGAAT+GGG | 0.418268 | 1.4:-31784240 | MS.gene96906:intron |
GTCACCATTTCCGTTGATGA+TGG | 0.423720 | 1.4:-31786933 | MS.gene96906:CDS |
AAGAAGTATTGCAATGCAAA+AGG | 0.426968 | 1.4:-31786696 | MS.gene96906:CDS |
GTCGGTTCTGTATTGGGAGC+TGG | 0.433413 | 1.4:-31787875 | MS.gene96906:CDS |
GTTACGGCAATATACAAATT+GGG | 0.434539 | 1.4:+31784942 | None:intergenic |
CCAATCGCTTTGGAGTTTCA+AGG | 0.435048 | 1.4:-31787271 | MS.gene96906:CDS |
AATTCCATCATCAACGGAAA+TGG | 0.437634 | 1.4:+31786929 | None:intergenic |
CCTTGAAACTCCAAAGCGAT+TGG | 0.443317 | 1.4:+31787271 | None:intergenic |
TGGTGTTGATCCTGCCATCA+TGG | 0.449169 | 1.4:-31785145 | MS.gene96906:CDS |
TGATGTAGCTGCTGCTATAA+GGG | 0.452992 | 1.4:-31787660 | MS.gene96906:CDS |
CAAAACTGCCTCCTTCCAAT+GGG | 0.459453 | 1.4:-31787314 | MS.gene96906:CDS |
AGCTTTGCAATGCCCGCAAA+GGG | 0.463134 | 1.4:-31784179 | MS.gene96906:CDS |
ACACAGCTTTAAGCTTTCCT+AGG | 0.466091 | 1.4:+31786883 | None:intergenic |
ACAGGAGCTAGGATATCATC+AGG | 0.471003 | 1.4:+31788056 | None:intergenic |
AGATGTGGAAGATGAATCAT+TGG | 0.474876 | 1.4:+31789081 | None:intergenic |
ATCCAGAGACTGTGCCGGTT+AGG | 0.477289 | 1.4:-31787724 | MS.gene96906:intron |
TGCCATTGGATTAGTTGTCA+TGG | 0.478121 | 1.4:+31787515 | None:intergenic |
AACTTGAACCCAAGTGAAGT+TGG | 0.479113 | 1.4:-31787908 | MS.gene96906:CDS |
ACAATATCTCCAACTTCACT+TGG | 0.482345 | 1.4:+31787899 | None:intergenic |
TCACAAAAGATCAATGTTAA+CGG | 0.488907 | 1.4:-31784904 | MS.gene96906:CDS |
CAGGCTTCAGCATGTTTGGC+GGG | 0.489612 | 1.4:-31788331 | MS.gene96906:CDS |
TGTCTGTTAACTGTCCTAAC+CGG | 0.490107 | 1.4:+31787710 | None:intergenic |
GAAGTTGGAGATATTGTTGT+CGG | 0.492011 | 1.4:-31787893 | MS.gene96906:CDS |
AGAAGTATTGCAATGCAAAA+GGG | 0.494786 | 1.4:-31786695 | MS.gene96906:CDS |
CCAAAACTGCCTCCTTCCAA+TGG | 0.495559 | 1.4:-31787315 | MS.gene96906:CDS |
ACGGAGGTGCAATGGCAATT+GGG | 0.495713 | 1.4:-31784885 | MS.gene96906:CDS |
CCAGTTGCCGTGAAAGCTGC+AGG | 0.496618 | 1.4:-31785099 | MS.gene96906:CDS |
ACTGATCCATCCCATGCCAT+TGG | 0.498873 | 1.4:+31787501 | None:intergenic |
GGGCCAACACCCATGATGGC+AGG | 0.504707 | 1.4:+31785135 | None:intergenic |
GTACCTGAATACACCAAGAA+TGG | 0.508482 | 1.4:+31786667 | None:intergenic |
GTAGCTGCTGCTATAAGGGC+TGG | 0.512492 | 1.4:-31787656 | MS.gene96906:CDS |
ACATGGATATTACTCCATAT+CGG | 0.516143 | 1.4:+31784355 | None:intergenic |
GTATATTGCCGTAACAAGCT+AGG | 0.516878 | 1.4:-31784934 | MS.gene96906:CDS |
AGGTCAGATAATGATGCGTT+GGG | 0.517353 | 1.4:+31786903 | None:intergenic |
ACAGGCTTCAGCATGTTTGG+CGG | 0.517549 | 1.4:-31788332 | MS.gene96906:intron |
TACCTGAATACACCAAGAAT+GGG | 0.522492 | 1.4:+31786668 | None:intergenic |
TGTAGGAGTTTCGTCGCAGT+TGG | 0.529855 | 1.4:-31785165 | MS.gene96906:intron |
GATCCTGCCATCATGGGTGT+TGG | 0.532689 | 1.4:-31785138 | MS.gene96906:CDS |
AAAGACGGAACCACCACTGC+TGG | 0.533346 | 1.4:-31786855 | MS.gene96906:intron |
AATCAAGTCCTAGCTTGTTA+CGG | 0.534024 | 1.4:+31784926 | None:intergenic |
AACTTCACTTGGGTTCAAGT+TGG | 0.534134 | 1.4:+31787910 | None:intergenic |
GAGCATCCTTGGATAAGAAA+AGG | 0.536509 | 1.4:+31784151 | None:intergenic |
AGCTGGGCCAACACCCATGA+TGG | 0.538149 | 1.4:+31785131 | None:intergenic |
CAACTGGAATTGCAGCAGCT+GGG | 0.538167 | 1.4:+31785115 | None:intergenic |
TGAAATGAAGCGACGTGGCA+AGG | 0.538544 | 1.4:-31784382 | MS.gene96906:CDS |
CAGAGGTAATCCCCATTGGA+AGG | 0.540583 | 1.4:+31787303 | None:intergenic |
AGAAAAGGTTGTCCCCTTTG+CGG | 0.541326 | 1.4:+31784166 | None:intergenic |
GAAACAAACATTGAGAGATG+TGG | 0.541636 | 1.4:+31789066 | None:intergenic |
TAGGTCAGATAATGATGCGT+TGG | 0.542770 | 1.4:+31786902 | None:intergenic |
GGTGTTGATCCTGCCATCAT+GGG | 0.545097 | 1.4:-31785144 | MS.gene96906:CDS |
CTCCAGCACCATCACTCACC+TGG | 0.557295 | 1.4:+31786735 | None:intergenic |
AAACCTTCAAAACAGGAGCT+AGG | 0.557984 | 1.4:+31788045 | None:intergenic |
GTTGATAGGTTGAGTCTCAC+AGG | 0.558743 | 1.4:-31787133 | MS.gene96906:intron |
CAATGTTAACGGAGGTGCAA+TGG | 0.560069 | 1.4:-31784893 | MS.gene96906:CDS |
GAAATTGGTAAATACCTTGG+TGG | 0.564842 | 1.4:+31787055 | None:intergenic |
TGATCTTATACCAGCAGTGG+TGG | 0.567622 | 1.4:+31786845 | None:intergenic |
AGCCAGGTGAGTGATGGTGC+TGG | 0.568071 | 1.4:-31786737 | MS.gene96906:CDS |
GACAACTAATCCAATGGCAT+GGG | 0.568175 | 1.4:-31787511 | MS.gene96906:CDS |
ATTGTGAGCAGGTACTGGAA+TGG | 0.569253 | 1.4:-31784241 | MS.gene96906:intron |
TGACAACTAATCCAATGGCA+TGG | 0.569744 | 1.4:-31787512 | MS.gene96906:CDS |
TTATGATCTTATACCAGCAG+TGG | 0.573440 | 1.4:+31786842 | None:intergenic |
GAGCTTTGCAATGCCCGCAA+AGG | 0.573513 | 1.4:-31784180 | MS.gene96906:CDS |
TATGTGTTTGCAGTGCATAT+CGG | 0.578334 | 1.4:-31788124 | MS.gene96906:intron |
AAGAGCTAGTGAATGTCGTA+TGG | 0.581957 | 1.4:-31787846 | MS.gene96906:CDS |
ATCCATGACAACTAATCCAA+TGG | 0.583716 | 1.4:-31787517 | MS.gene96906:CDS |
GAGACAGTGCTGCTTATCAC+AGG | 0.584230 | 1.4:-31788309 | MS.gene96906:CDS |
TGTGAGCAGGTACTGGAATG+GGG | 0.588396 | 1.4:-31784239 | MS.gene96906:intron |
TCACAGGACAGCTGCATTTG+GGG | 0.588788 | 1.4:-31788293 | MS.gene96906:CDS |
GGAGTAATATCCATGTGCAT+TGG | 0.596790 | 1.4:-31784348 | MS.gene96906:intron |
TATATACCTGTTGCTCCCAA+AGG | 0.599601 | 1.4:+31784859 | None:intergenic |
GAAGTATTGCAATGCAAAAG+GGG | 0.600485 | 1.4:-31786694 | MS.gene96906:CDS |
AATTCTAGCCAGGTGAGTGA+TGG | 0.600677 | 1.4:-31786743 | MS.gene96906:CDS |
CAATATCTCCAACTTCACTT+GGG | 0.604564 | 1.4:+31787900 | None:intergenic |
ACTAATCCAATGGCATGGGA+TGG | 0.605555 | 1.4:-31787507 | MS.gene96906:CDS |
TCCCCATCCAGAGACTGTGC+CGG | 0.611728 | 1.4:-31787729 | MS.gene96906:intron |
CTTTGCAAAGCTAAACGTGG+TGG | 0.621994 | 1.4:-31788095 | MS.gene96906:CDS |
TTAACAGACAATGTTCATCT+GGG | 0.630670 | 1.4:-31787697 | MS.gene96906:CDS |
GGGTCGAATTCCATCATCAA+CGG | 0.642050 | 1.4:+31786923 | None:intergenic |
GTGAGCAGGTACTGGAATGG+GGG | 0.647925 | 1.4:-31784238 | MS.gene96906:intron |
AGTGAGTGTACCAATGCACA+TGG | 0.653800 | 1.4:+31784338 | None:intergenic |
AGGTAATCCCCATTGGAAGG+AGG | 0.656135 | 1.4:+31787306 | None:intergenic |
AATCATTCCAGTTTCCACCA+AGG | 0.667285 | 1.4:-31787069 | MS.gene96906:intron |
GGTTGAGTCTCACAGGCGAG+CGG | 0.670559 | 1.4:-31787126 | MS.gene96906:CDS |
CAAAAGATCAATGTTAACGG+AGG | 0.676322 | 1.4:-31784901 | MS.gene96906:CDS |
AAAACTGCCTCCTTCCAATG+GGG | 0.685024 | 1.4:-31787313 | MS.gene96906:CDS |
GCTTTGCAATGCCCGCAAAG+GGG | 0.689691 | 1.4:-31784178 | MS.gene96906:CDS |
CAGGAGCTAGGATATCATCA+GGG | 0.699408 | 1.4:+31788057 | None:intergenic |
TTGCATGAAATGAAGCGACG+TGG | 0.723164 | 1.4:-31784387 | MS.gene96906:CDS |
AACGCATCATTATCTGACCT+AGG | 0.725641 | 1.4:-31786900 | MS.gene96906:CDS |
GCTCTTTGCAAAGCTAAACG+TGG | 0.726080 | 1.4:-31788098 | MS.gene96906:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CATTTTAAATAATTATATAG+GGG | + | chr1.4:31787417-31787436 | None:intergenic | 10.0% |
!! | AATAAACAATGTTAACTATA+TGG | + | chr1.4:31789026-31789045 | None:intergenic | 15.0% |
!! | ATTAATTACGGAATATAATA+GGG | - | chr1.4:31787440-31787459 | MS.gene96906:intron | 15.0% |
!! | TATTAATTACGGAATATAAT+AGG | - | chr1.4:31787439-31787458 | MS.gene96906:intron | 15.0% |
!!! | ACAATTATATAATGCATTTT+GGG | + | chr1.4:31787049-31787068 | None:intergenic | 15.0% |
!!! | AGTATATATTCATGTTTTTT+TGG | + | chr1.4:31786858-31786877 | None:intergenic | 15.0% |
!!! | TTCTATAAAAGTATATGAAT+TGG | - | chr1.4:31784721-31784740 | MS.gene96906:intron | 15.0% |
!! | AAATAAAACCAGTACTTATA+TGG | + | chr1.4:31786948-31786967 | None:intergenic | 20.0% |
!! | AAATGCATTATATAATTGTG+TGG | - | chr1.4:31787050-31787069 | MS.gene96906:intron | 20.0% |
!! | AAGATTCAATAACAATTGTT+CGG | + | chr1.4:31788072-31788091 | None:intergenic | 20.0% |
!! | AATACAATATACCTTTATAG+TGG | + | chr1.4:31786261-31786280 | None:intergenic | 20.0% |
!! | AATCTAAAAATCATCTTTGT+TGG | - | chr1.4:31788097-31788116 | MS.gene96906:CDS | 20.0% |
!! | ATAAATAAAACCTTCAAAAC+AGG | + | chr1.4:31785256-31785275 | None:intergenic | 20.0% |
!! | CCTAAACAAAAAATAGTTAA+AGG | + | chr1.4:31785736-31785755 | None:intergenic | 20.0% |
!! | CTTAAAATAATACCTCTAAA+GGG | - | chr1.4:31785899-31785918 | MS.gene96906:intron | 20.0% |
!! | GAAAAAGACATGAATATATT+AGG | + | chr1.4:31788715-31788734 | None:intergenic | 20.0% |
!! | GAACTAAAATATCATAAACT+AGG | - | chr1.4:31788793-31788812 | MS.gene96906:intron | 20.0% |
!! | GAATATAGTTTAATGTTTGT+TGG | - | chr1.4:31784753-31784772 | MS.gene96906:intron | 20.0% |
!! | GTTATATTAGAAAGAATTTG+AGG | + | chr1.4:31786490-31786509 | None:intergenic | 20.0% |
!! | TATGGAAAAAAAGAATATCA+AGG | + | chr1.4:31787604-31787623 | None:intergenic | 20.0% |
!! | TCTTAAAATAATACCTCTAA+AGG | - | chr1.4:31785898-31785917 | MS.gene96906:intron | 20.0% |
!! | TGTGTTTATGTATGTATATA+TGG | - | chr1.4:31784833-31784852 | MS.gene96906:intron | 20.0% |
!! | TTTATTTGGTATACTTGAAA+AGG | + | chr1.4:31787627-31787646 | None:intergenic | 20.0% |
!!! | AACAAAGATGATTTTTAGAT+TGG | + | chr1.4:31788098-31788117 | None:intergenic | 20.0% |
!!! | ACTATTTTTTGTTTAGGTAT+TGG | - | chr1.4:31785739-31785758 | MS.gene96906:intron | 20.0% |
!!! | ATGAAATGTGTGATAATTTT+TGG | - | chr1.4:31786777-31786796 | MS.gene96906:intron | 20.0% |
!!! | CACAATTATATAATGCATTT+TGG | + | chr1.4:31787050-31787069 | None:intergenic | 20.0% |
!!! | CCTTTAACTATTTTTTGTTT+AGG | - | chr1.4:31785733-31785752 | MS.gene96906:intron | 20.0% |
!!! | GAATATGAACATATACTTTT+TGG | + | chr1.4:31784432-31784451 | None:intergenic | 20.0% |
!!! | TATATATGATTTGAGTTTTG+AGG | - | chr1.4:31784603-31784622 | MS.gene96906:intron | 20.0% |
!!! | TATTAGGTTATTTTAGCTAT+AGG | + | chr1.4:31788699-31788718 | None:intergenic | 20.0% |
!!! | TGAAAAAATTAATTTGGCAA+AGG | + | chr1.4:31785856-31785875 | None:intergenic | 20.0% |
!!! | TTATTTTATTTTTGGGATGT+AGG | - | chr1.4:31788859-31788878 | MS.gene96906:intron | 20.0% |
!!! | TTTACCTTATCTTTTCTATT+GGG | - | chr1.4:31787343-31787362 | MS.gene96906:intron | 20.0% |
!!! | TTTATAAACCGATTTCAAAT+TGG | - | chr1.4:31786684-31786703 | MS.gene96906:CDS | 20.0% |
!!! | TTTTACCTTATCTTTTCTAT+TGG | - | chr1.4:31787342-31787361 | MS.gene96906:intron | 20.0% |
! | AAAAACAGGAAAATTACTCT+AGG | + | chr1.4:31785820-31785839 | None:intergenic | 25.0% |
! | AAACACACATAAAATCCAAA+AGG | + | chr1.4:31784325-31784344 | None:intergenic | 25.0% |
! | AAATGGAGAGAAAAGAAAAT+AGG | + | chr1.4:31788024-31788043 | None:intergenic | 25.0% |
! | AACACACATAAAATCCAAAA+GGG | + | chr1.4:31784324-31784343 | None:intergenic | 25.0% |
! | AAGTTTAACCATATAAGTAC+TGG | - | chr1.4:31786937-31786956 | MS.gene96906:CDS | 25.0% |
! | ACTAGGTAACAAATAATAAC+TGG | - | chr1.4:31788810-31788829 | MS.gene96906:intron | 25.0% |
! | AGTATATGTTCATATTCATG+TGG | - | chr1.4:31784435-31784454 | MS.gene96906:intron | 25.0% |
! | ATTGATATTTCATCTTCTGT+TGG | - | chr1.4:31787898-31787917 | MS.gene96906:CDS | 25.0% |
! | CGCAAAATATATCATATTTG+TGG | - | chr1.4:31787163-31787182 | MS.gene96906:intron | 25.0% |
! | GAAGTTAGTACATTAACAAA+TGG | + | chr1.4:31788299-31788318 | None:intergenic | 25.0% |
! | TAGATACATGAAAGTTAATC+TGG | + | chr1.4:31786884-31786903 | None:intergenic | 25.0% |
! | TCAATCTCACATACTTTATT+TGG | + | chr1.4:31787641-31787660 | None:intergenic | 25.0% |
! | TCACAAAAGAACCAATTAAA+AGG | + | chr1.4:31784291-31784310 | None:intergenic | 25.0% |
! | TCACAAAAGATCAATGTTAA+CGG | - | chr1.4:31788387-31788406 | MS.gene96906:intron | 25.0% |
! | TGGTAACTTTCAAAACAAAA+AGG | + | chr1.4:31788548-31788567 | None:intergenic | 25.0% |
! | TGTTTGGATATTCATATTGA+TGG | - | chr1.4:31784401-31784420 | MS.gene96906:CDS | 25.0% |
! | TTATATCATGTTAAAGAGCA+GGG | + | chr1.4:31786733-31786752 | None:intergenic | 25.0% |
! | TTATCAGCAAGATTTAGTTA+TGG | + | chr1.4:31786134-31786153 | None:intergenic | 25.0% |
! | TTGAAATGCATATATGTATG+TGG | + | chr1.4:31788838-31788857 | None:intergenic | 25.0% |
! | TTGCTGATAATATTGTTGAT+AGG | - | chr1.4:31786144-31786163 | MS.gene96906:intron | 25.0% |
! | TTGGAAAAATATCAAATCAG+TGG | - | chr1.4:31786796-31786815 | MS.gene96906:intron | 25.0% |
! | TTTACCAATTTCCACTATAA+AGG | - | chr1.4:31786247-31786266 | MS.gene96906:intron | 25.0% |
! | TTTATATCATGTTAAAGAGC+AGG | + | chr1.4:31786734-31786753 | None:intergenic | 25.0% |
!! | ACTTGAATTGATTCAACATA+AGG | + | chr1.4:31786910-31786929 | None:intergenic | 25.0% |
!! | GTATATTGTATTTTCCTTTC+CGG | - | chr1.4:31786269-31786288 | MS.gene96906:intron | 25.0% |
!! | TATACCTTTATAGTGGAAAT+TGG | + | chr1.4:31786254-31786273 | None:intergenic | 25.0% |
!! | TCAATGATTTGCATATATTC+AGG | - | chr1.4:31788317-31788336 | MS.gene96906:CDS | 25.0% |
!! | TGATTTTATCGCCTTTTAAT+TGG | - | chr1.4:31784277-31784296 | MS.gene96906:intron | 25.0% |
!! | TTATCCTTGTCTTTTTGAAT+TGG | - | chr1.4:31784639-31784658 | MS.gene96906:intron | 25.0% |
!! | TTGTTGGAATATGAATTTTC+AGG | - | chr1.4:31784769-31784788 | MS.gene96906:intron | 25.0% |
!!! | CGATCTTTTTGAAATTAATG+AGG | - | chr1.4:31788233-31788252 | MS.gene96906:intron | 25.0% |
!!! | GTGTTGGTTTGATAAAAATA+AGG | - | chr1.4:31784576-31784595 | MS.gene96906:intron | 25.0% |
!!! | TGTGTTTTTGTTTTCTTGAT+TGG | - | chr1.4:31784338-31784357 | MS.gene96906:intron | 25.0% |
!!! | TTATATAATGCATTTTGGGT+TGG | + | chr1.4:31787045-31787064 | None:intergenic | 25.0% |
AAAGCTGTGTTCAAAAAAGA+CGG | - | chr1.4:31786421-31786440 | MS.gene96906:intron | 30.0% | |
AACGTGAACTAAAGTAGTAA+AGG | + | chr1.4:31785290-31785309 | None:intergenic | 30.0% | |
AATATCAAATGCCACGATAA+AGG | + | chr1.4:31787111-31787130 | None:intergenic | 30.0% | |
ACAAATTATCTAGACATACC+AGG | + | chr1.4:31785491-31785510 | None:intergenic | 30.0% | |
ACATATTCAAACCAAAGCAA+AGG | + | chr1.4:31784816-31784835 | None:intergenic | 30.0% | |
ACATGGATATTACTCCATAT+CGG | + | chr1.4:31788939-31788958 | None:intergenic | 30.0% | |
ATATATATCGTCTCGATCAT+TGG | - | chr1.4:31784499-31784518 | MS.gene96906:intron | 30.0% | |
ATATCAAATGCCACGATAAA+GGG | + | chr1.4:31787110-31787129 | None:intergenic | 30.0% | |
CATATTCAAACCAAAGCAAA+GGG | + | chr1.4:31784815-31784834 | None:intergenic | 30.0% | |
GAATATAATAGGGCTATTGA+TGG | - | chr1.4:31787450-31787469 | MS.gene96906:intron | 30.0% | |
GAGAAAAGGAAAATAAGACA+AGG | + | chr1.4:31788273-31788292 | None:intergenic | 30.0% | |
GAGATAAAGTTAGGAAAAAC+AGG | + | chr1.4:31785834-31785853 | None:intergenic | 30.0% | |
GTAAAAAGGAGAAAGGAAAA+CGG | - | chr1.4:31787772-31787791 | MS.gene96906:intron | 30.0% | |
GTTACGGCAATATACAAATT+GGG | + | chr1.4:31788352-31788371 | None:intergenic | 30.0% | |
GTTTATTGTAAATTGTGAGC+AGG | - | chr1.4:31789039-31789058 | MS.gene96906:intron | 30.0% | |
TATTCATGTGGATTCTATTG+TGG | - | chr1.4:31784447-31784466 | MS.gene96906:intron | 30.0% | |
TCATTGGATGAAAAAGAAGA+AGG | + | chr1.4:31784197-31784216 | None:intergenic | 30.0% | |
TCGGTTTATAAATATCGTCA+CGG | + | chr1.4:31786676-31786695 | None:intergenic | 30.0% | |
TCTAAATCAGAACCTAATAC+CGG | + | chr1.4:31786291-31786310 | None:intergenic | 30.0% | |
TCTACCCAATAGAAAAGATA+AGG | + | chr1.4:31787350-31787369 | None:intergenic | 30.0% | |
TGTTACGGCAATATACAAAT+TGG | + | chr1.4:31788353-31788372 | None:intergenic | 30.0% | |
TTAACAAATGGTGAGAGAAA+AGG | + | chr1.4:31788287-31788306 | None:intergenic | 30.0% | |
TTAACAGACAATGTTCATCT+GGG | - | chr1.4:31785594-31785613 | MS.gene96906:intron | 30.0% | |
TTAGTTGTGAAGAGGTAAAA+AGG | - | chr1.4:31787758-31787777 | MS.gene96906:intron | 30.0% | |
TTATAGAACCAACACAAATC+AGG | + | chr1.4:31784709-31784728 | None:intergenic | 30.0% | |
TTGGTATACTTGAAAAGGTA+TGG | + | chr1.4:31787622-31787641 | None:intergenic | 30.0% | |
TTTCTTTCCTAAACCAAACA+TGG | + | chr1.4:31787232-31787251 | None:intergenic | 30.0% | |
! | ACAATGTGCCAATTTGAAAT+CGG | + | chr1.4:31786695-31786714 | None:intergenic | 30.0% |
! | ATCTTTGTTGGTTGTAATGT+AGG | - | chr1.4:31788109-31788128 | MS.gene96906:CDS | 30.0% |
! | GCTTTGAATTAAACTTGTTC+TGG | - | chr1.4:31784902-31784921 | MS.gene96906:CDS | 30.0% |
! | GGATTTTATGACATTGGTAA+GGG | - | chr1.4:31785656-31785675 | MS.gene96906:intron | 30.0% |
! | TACTTTTCGGTTGTTACAAA+TGG | - | chr1.4:31787552-31787571 | MS.gene96906:intron | 30.0% |
! | TGATTTGATGTCTGTGTTTT+AGG | - | chr1.4:31786524-31786543 | MS.gene96906:intron | 30.0% |
! | TGGATTTTATGACATTGGTA+AGG | - | chr1.4:31785655-31785674 | MS.gene96906:intron | 30.0% |
! | TGTTGAACATTTGATTTCAC+AGG | - | chr1.4:31784941-31784960 | MS.gene96906:CDS | 30.0% |
! | TTGAATTAAACTTGTTCTGG+TGG | - | chr1.4:31784905-31784924 | MS.gene96906:CDS | 30.0% |
!! | AAATACAAGTTGTTGACTTG+TGG | + | chr1.4:31788458-31788477 | None:intergenic | 30.0% |
!! | AAGAAGTATTGCAATGCAAA+AGG | - | chr1.4:31786595-31786614 | MS.gene96906:intron | 30.0% |
!! | AGAAGTATTGCAATGCAAAA+GGG | - | chr1.4:31786596-31786615 | MS.gene96906:intron | 30.0% |
!! | AGTATCGGTAGGAAATAAAA+TGG | + | chr1.4:31788041-31788060 | None:intergenic | 30.0% |
!! | ATGTGATGTCTTTTTCACTT+TGG | + | chr1.4:31787947-31787966 | None:intergenic | 30.0% |
!! | GAATATGAATTTTCAGGAGA+GGG | - | chr1.4:31784775-31784794 | MS.gene96906:intron | 30.0% |
!! | GTTTTGATCTTGAATCTGTT+TGG | - | chr1.4:31784385-31784404 | MS.gene96906:CDS | 30.0% |
!! | TGTTTGGAACTTTAGAGTTT+AGG | + | chr1.4:31787987-31788006 | None:intergenic | 30.0% |
!!! | GAGGAAATTTTTTTTGGTGT+GGG | + | chr1.4:31787811-31787830 | None:intergenic | 30.0% |
!!! | TTCTTGATTGGTTTTTAGCT+TGG | - | chr1.4:31784350-31784369 | MS.gene96906:CDS | 30.0% |
AAAAAAATTTCCTCCTGAGG+TGG | - | chr1.4:31787817-31787836 | MS.gene96906:intron | 35.0% | |
AAAAATGATGCTGTAGCTCA+TGG | + | chr1.4:31788488-31788507 | None:intergenic | 35.0% | |
AACAAAACTGTAATGTGCCT+TGG | - | chr1.4:31788736-31788755 | MS.gene96906:intron | 35.0% | |
AATAACAATTGTTCGGTTGC+AGG | + | chr1.4:31788065-31788084 | None:intergenic | 35.0% | |
AATTCCATCATCAACGGAAA+TGG | + | chr1.4:31786365-31786384 | None:intergenic | 35.0% | |
ACAATATCTCCAACTTCACT+TGG | + | chr1.4:31785395-31785414 | None:intergenic | 35.0% | |
ACCTCTTCACAACTAAACAA+GGG | + | chr1.4:31787754-31787773 | None:intergenic | 35.0% | |
AGATGTGGAAGATGAATCAT+TGG | + | chr1.4:31784213-31784232 | None:intergenic | 35.0% | |
ATAACAATTGTTCGGTTGCA+GGG | + | chr1.4:31788064-31788083 | None:intergenic | 35.0% | |
ATCCATGACAACTAATCCAA+TGG | - | chr1.4:31785774-31785793 | MS.gene96906:intron | 35.0% | |
CAAAAGATCAATGTTAACGG+AGG | - | chr1.4:31788390-31788409 | MS.gene96906:intron | 35.0% | |
CAATAAAACTGTTTCCCTGA+TGG | + | chr1.4:31787501-31787520 | None:intergenic | 35.0% | |
CAATATCTCCAACTTCACTT+GGG | + | chr1.4:31785394-31785413 | None:intergenic | 35.0% | |
CACAACTAAACAAGGGAAAA+TGG | + | chr1.4:31787747-31787766 | None:intergenic | 35.0% | |
CCAAAAAAAATTTCCTCCTG+AGG | - | chr1.4:31787814-31787833 | MS.gene96906:intron | 35.0% | |
CTTTGTCTGATGAATTCGAT+GGG | - | chr1.4:31784543-31784562 | MS.gene96906:intron | 35.0% | |
GAAACAAACATTGAGAGATG+TGG | + | chr1.4:31784228-31784247 | None:intergenic | 35.0% | |
GAAATTGGTAAATACCTTGG+TGG | + | chr1.4:31786239-31786258 | None:intergenic | 35.0% | |
GAAGTTGGAGATATTGTTGT+CGG | - | chr1.4:31785398-31785417 | MS.gene96906:intron | 35.0% | |
GATGAGTAAAAGTGAAAGAG+TGG | + | chr1.4:31787877-31787896 | None:intergenic | 35.0% | |
GGTACCAATTCAAAAAGACA+AGG | + | chr1.4:31784646-31784665 | None:intergenic | 35.0% | |
GGTGTATTCAGGTACTTAAT+TGG | - | chr1.4:31786632-31786651 | MS.gene96906:intron | 35.0% | |
GTGGAAATTGGTAAATACCT+TGG | + | chr1.4:31786242-31786261 | None:intergenic | 35.0% | |
GTTAACAGACAATGTTCATC+TGG | - | chr1.4:31785593-31785612 | MS.gene96906:intron | 35.0% | |
TACAACACAGTGCATAAAAC+AGG | + | chr1.4:31787083-31787102 | None:intergenic | 35.0% | |
TACCTCTTCACAACTAAACA+AGG | + | chr1.4:31787755-31787774 | None:intergenic | 35.0% | |
TACCTGAATACACCAAGAAT+GGG | + | chr1.4:31786626-31786645 | None:intergenic | 35.0% | |
TATCAAATGCCACGATAAAG+GGG | + | chr1.4:31787109-31787128 | None:intergenic | 35.0% | |
TATGTGTTTGCAGTGCATAT+CGG | - | chr1.4:31785167-31785186 | MS.gene96906:intron | 35.0% | |
TATTTCTTACTTTGTCGTGC+AGG | - | chr1.4:31785934-31785953 | MS.gene96906:intron | 35.0% | |
TCTTTGTCTGATGAATTCGA+TGG | - | chr1.4:31784542-31784561 | MS.gene96906:intron | 35.0% | |
TGAAGAGGTAAAAAGGAGAA+AGG | - | chr1.4:31787765-31787784 | MS.gene96906:intron | 35.0% | |
TGATGTTGAGGTTTCATTGT+AGG | - | chr1.4:31785343-31785362 | MS.gene96906:intron | 35.0% | |
TGGAGAGAAAAGAAAATAGG+TGG | + | chr1.4:31788021-31788040 | None:intergenic | 35.0% | |
TTATGATCTTATACCAGCAG+TGG | + | chr1.4:31786452-31786471 | None:intergenic | 35.0% | |
TTGGCAAAGGAGATAAAGTT+AGG | + | chr1.4:31785843-31785862 | None:intergenic | 35.0% | |
TTTACATGAACGTGATGTTG+AGG | - | chr1.4:31785331-31785350 | MS.gene96906:intron | 35.0% | |
TTTGTCTGATGAATTCGATG+GGG | - | chr1.4:31784544-31784563 | MS.gene96906:intron | 35.0% | |
! | AATCATGACCTGATTTGTGT+TGG | - | chr1.4:31784698-31784717 | MS.gene96906:intron | 35.0% |
! | GTATTTTCCTTTCCGGTATT+AGG | - | chr1.4:31786276-31786295 | MS.gene96906:intron | 35.0% |
! | TGTAACAACCGAAAAGTATG+TGG | + | chr1.4:31787550-31787569 | None:intergenic | 35.0% |
! | TTTCTGCTCCACATACTTTT+CGG | - | chr1.4:31787539-31787558 | MS.gene96906:CDS | 35.0% |
! | TTTTCGGTTGTTACAAATGG+TGG | - | chr1.4:31787555-31787574 | MS.gene96906:intron | 35.0% |
!! | AATCAAGTCCTAGCTTGTTA+CGG | + | chr1.4:31788368-31788387 | None:intergenic | 35.0% |
!! | ATTGTTGTCGGTTCTGTATT+GGG | - | chr1.4:31785410-31785429 | MS.gene96906:intron | 35.0% |
!! | CATCAGGGAAACAGTTTTAT+TGG | - | chr1.4:31787499-31787518 | MS.gene96906:CDS | 35.0% |
!! | GAAGTATTGCAATGCAAAAG+GGG | - | chr1.4:31786597-31786616 | MS.gene96906:intron | 35.0% |
!! | GGAATATGAATTTTCAGGAG+AGG | - | chr1.4:31784774-31784793 | MS.gene96906:intron | 35.0% |
!! | GGTGGATTTTACAGATTGTT+TGG | + | chr1.4:31788003-31788022 | None:intergenic | 35.0% |
!! | GTGATATTTGATGACCCTTT+TGG | - | chr1.4:31784307-31784326 | MS.gene96906:intron | 35.0% |
!! | TATTGTTGTCGGTTCTGTAT+TGG | - | chr1.4:31785409-31785428 | MS.gene96906:intron | 35.0% |
!! | TGTTTTAGGTAATTCTAGCC+AGG | - | chr1.4:31786538-31786557 | MS.gene96906:intron | 35.0% |
!! | TTGGAACTTTAGAGTTTAGG+TGG | + | chr1.4:31787984-31788003 | None:intergenic | 35.0% |
!!! | AGGGAAACAGTTTTATTGGT+GGG | - | chr1.4:31787503-31787522 | MS.gene96906:CDS | 35.0% |
!!! | CCTCAGGAGGAAATTTTTTT+TGG | + | chr1.4:31787817-31787836 | None:intergenic | 35.0% |
!!! | GGAGGAAATTTTTTTTGGTG+TGG | + | chr1.4:31787812-31787831 | None:intergenic | 35.0% |
!!! | TTTTGTTTAGGTATTGGTGC+TGG | - | chr1.4:31785745-31785764 | MS.gene96906:intron | 35.0% |
AAACCTTCAAAACAGGAGCT+AGG | + | chr1.4:31785249-31785268 | None:intergenic | 40.0% | |
AAAGGAGAAAGGAAAACGGT+TGG | - | chr1.4:31787776-31787795 | MS.gene96906:intron | 40.0% | |
AACGCATCATTATCTGACCT+AGG | - | chr1.4:31786391-31786410 | MS.gene96906:intron | 40.0% | |
AACTTCACTTGGGTTCAAGT+TGG | + | chr1.4:31785384-31785403 | None:intergenic | 40.0% | |
AACTTGAACCCAAGTGAAGT+TGG | - | chr1.4:31785383-31785402 | MS.gene96906:intron | 40.0% | |
AAGAGCTAGTGAATGTCGTA+TGG | - | chr1.4:31785445-31785464 | MS.gene96906:intron | 40.0% | |
AAGGAGAAAGGAAAACGGTT+GGG | - | chr1.4:31787777-31787796 | MS.gene96906:intron | 40.0% | |
AAGTATGTGGAGCAGAAAAG+TGG | + | chr1.4:31787537-31787556 | None:intergenic | 40.0% | |
AATAGGGCTATTGATGGAGA+TGG | - | chr1.4:31787456-31787475 | MS.gene96906:intron | 40.0% | |
AATCATTCCAGTTTCCACCA+AGG | - | chr1.4:31786222-31786241 | MS.gene96906:intron | 40.0% | |
ACCACAATCGATAGAATGCA+AGG | + | chr1.4:31787139-31787158 | None:intergenic | 40.0% | |
ACTTATTGAGCAAACTCGTC+AGG | - | chr1.4:31787693-31787712 | MS.gene96906:CDS | 40.0% | |
AGGTCAGATAATGATGCGTT+GGG | + | chr1.4:31786391-31786410 | None:intergenic | 40.0% | |
AGTATGTGGAGCAGAAAAGT+GGG | + | chr1.4:31787536-31787555 | None:intergenic | 40.0% | |
ATCACGAGCTTCTACTTTCA+AGG | - | chr1.4:31784673-31784692 | MS.gene96906:intron | 40.0% | |
ATCAGAACCTAATACCGGAA+AGG | + | chr1.4:31786286-31786305 | None:intergenic | 40.0% | |
CAACATGACATTGAGACATG+TGG | + | chr1.4:31788626-31788645 | None:intergenic | 40.0% | |
CACATGTCTCAATGTCATGT+TGG | - | chr1.4:31788624-31788643 | MS.gene96906:intron | 40.0% | |
CCACAATCGATAGAATGCAA+GGG | + | chr1.4:31787138-31787157 | None:intergenic | 40.0% | |
CTGAATCTGATCGATGATTC+TGG | - | chr1.4:31785515-31785534 | MS.gene96906:intron | 40.0% | |
GAAAATGTTGCCAATCGCTT+TGG | - | chr1.4:31786010-31786029 | MS.gene96906:intron | 40.0% | |
GACAACTAATCCAATGGCAT+GGG | - | chr1.4:31785780-31785799 | MS.gene96906:intron | 40.0% | |
GACTTCTCGTCAATAGATTG+TGG | - | chr1.4:31786309-31786328 | MS.gene96906:intron | 40.0% | |
GAGCATCCTTGGATAAGAAA+AGG | + | chr1.4:31789143-31789162 | None:intergenic | 40.0% | |
GATCTATCTCGCAAACACAT+TGG | + | chr1.4:31788568-31788587 | None:intergenic | 40.0% | |
GGAGTAATATCCATGTGCAT+TGG | - | chr1.4:31788943-31788962 | MS.gene96906:intron | 40.0% | |
GTAAATACCTTGGTGGAAAC+TGG | + | chr1.4:31786232-31786251 | None:intergenic | 40.0% | |
GTACCTGAATACACCAAGAA+TGG | + | chr1.4:31786627-31786646 | None:intergenic | 40.0% | |
GTATATTGCCGTAACAAGCT+AGG | - | chr1.4:31788357-31788376 | MS.gene96906:intron | 40.0% | |
TAGATTGTGGACCCAAAAAC+TGG | - | chr1.4:31786322-31786341 | MS.gene96906:intron | 40.0% | |
TAGGTCAGATAATGATGCGT+TGG | + | chr1.4:31786392-31786411 | None:intergenic | 40.0% | |
TATATACCTGTTGCTCCCAA+AGG | + | chr1.4:31788435-31788454 | None:intergenic | 40.0% | |
TCGAATGCTGAAACCATGTT+TGG | - | chr1.4:31787216-31787235 | MS.gene96906:intron | 40.0% | |
TCTATTGGGTAGAAAGTGAG+AGG | - | chr1.4:31787357-31787376 | MS.gene96906:intron | 40.0% | |
TGACAACTAATCCAATGGCA+TGG | - | chr1.4:31785779-31785798 | MS.gene96906:intron | 40.0% | |
TGATGTAGCTGCTGCTATAA+GGG | - | chr1.4:31785631-31785650 | MS.gene96906:intron | 40.0% | |
TGTAAATTGTGAGCAGGTAC+TGG | - | chr1.4:31789045-31789064 | MS.gene96906:intron | 40.0% | |
TGTCTGTTAACTGTCCTAAC+CGG | + | chr1.4:31785584-31785603 | None:intergenic | 40.0% | |
! | AAAGAGCAGGGCATTCTAAT+GGG | + | chr1.4:31786721-31786740 | None:intergenic | 40.0% |
! | ACACCTTCAAACAGAAGTGT+TGG | - | chr1.4:31788656-31788675 | MS.gene96906:intron | 40.0% |
! | AGGGCTGGATTTTATGACAT+TGG | - | chr1.4:31785650-31785669 | MS.gene96906:intron | 40.0% |
! | ATTTCTCCTCGCCAGTTTTT+GGG | + | chr1.4:31786336-31786355 | None:intergenic | 40.0% |
! | GCTGAAACCATGTTTGGTTT+AGG | - | chr1.4:31787222-31787241 | MS.gene96906:intron | 40.0% |
! | GGACAACCTTTTCTTATCCA+AGG | - | chr1.4:31789134-31789153 | MS.gene96906:CDS | 40.0% |
! | GTCTTTTTGAATTGGTACCG+AGG | - | chr1.4:31784647-31784666 | MS.gene96906:intron | 40.0% |
! | TAAAGAGCAGGGCATTCTAA+TGG | + | chr1.4:31786722-31786741 | None:intergenic | 40.0% |
! | TACCCATTCTTGGTGTATTC+AGG | - | chr1.4:31786621-31786640 | MS.gene96906:intron | 40.0% |
! | TCATTTTATCTCTCCACCTC+AGG | + | chr1.4:31787833-31787852 | None:intergenic | 40.0% |
! | TCCCTTGTTTAGTTGTGAAG+AGG | - | chr1.4:31787750-31787769 | MS.gene96906:intron | 40.0% |
! | TTGCATTCTATCGATTGTGG+TGG | - | chr1.4:31787138-31787157 | MS.gene96906:intron | 40.0% |
! | TTTCATAGCTCTACGTACCA+AGG | + | chr1.4:31788756-31788775 | None:intergenic | 40.0% |
! | TTTTCAGAGGTAATCCCCAT+TGG | + | chr1.4:31785995-31786014 | None:intergenic | 40.0% |
!! | ACACAGCTTTAAGCTTTCCT+AGG | + | chr1.4:31786411-31786430 | None:intergenic | 40.0% |
!! | CAGGCTTGTCTTTTAGGAAA+TGG | - | chr1.4:31787712-31787731 | MS.gene96906:CDS | 40.0% |
!! | CATCTTCTGTTGGTTTCACT+TGG | - | chr1.4:31787908-31787927 | MS.gene96906:CDS | 40.0% |
!! | CTTAGTGCTCTGAAAACTTC+TGG | - | chr1.4:31786968-31786987 | MS.gene96906:CDS | 40.0% |
!! | TATCCTAGCTCCTGTTTTGA+AGG | - | chr1.4:31785243-31785262 | MS.gene96906:intron | 40.0% |
!! | TGCCATTGGATTAGTTGTCA+TGG | + | chr1.4:31785779-31785798 | None:intergenic | 40.0% |
!! | TTTAGGTATTGGTGCTGGTT+TGG | - | chr1.4:31785750-31785769 | MS.gene96906:intron | 40.0% |
!!! | CAGGGAAACAGTTTTATTGG+TGG | - | chr1.4:31787502-31787521 | MS.gene96906:CDS | 40.0% |
!!! | GCATTTTATGCTGGTTTTCC+TGG | - | chr1.4:31785470-31785489 | MS.gene96906:intron | 40.0% |
AAAACTGCCTCCTTCCAATG+GGG | - | chr1.4:31785978-31785997 | MS.gene96906:intron | 45.0% | |
AATGGCAATTGGGCATCCTT+TGG | - | chr1.4:31788416-31788435 | MS.gene96906:intron | 45.0% | |
AATTCTAGCCAGGTGAGTGA+TGG | - | chr1.4:31786548-31786567 | MS.gene96906:intron | 45.0% | |
ACAGGAGCTAGGATATCATC+AGG | + | chr1.4:31785238-31785257 | None:intergenic | 45.0% | |
ACTAATCCAATGGCATGGGA+TGG | - | chr1.4:31785784-31785803 | MS.gene96906:intron | 45.0% | |
AGAAAAGGTTGTCCCCTTTG+CGG | + | chr1.4:31789128-31789147 | None:intergenic | 45.0% | |
AGTGAGTGTACCAATGCACA+TGG | + | chr1.4:31788956-31788975 | None:intergenic | 45.0% | |
ATCACAGGACAGCTGCATTT+GGG | - | chr1.4:31784997-31785016 | MS.gene96906:intron | 45.0% | |
ATGGCAATTGGGCATCCTTT+GGG | - | chr1.4:31788417-31788436 | MS.gene96906:intron | 45.0% | |
CAAAACTGCCTCCTTCCAAT+GGG | - | chr1.4:31785977-31785996 | MS.gene96906:intron | 45.0% | |
CAGGAGCTAGGATATCATCA+GGG | + | chr1.4:31785237-31785256 | None:intergenic | 45.0% | |
CCTTGAAACTCCAAAGCGAT+TGG | + | chr1.4:31786023-31786042 | None:intergenic | 45.0% | |
CTGATGTAGCTGCTGCTATA+AGG | - | chr1.4:31785630-31785649 | MS.gene96906:intron | 45.0% | |
CTTTGCAAAGCTAAACGTGG+TGG | - | chr1.4:31785196-31785215 | MS.gene96906:intron | 45.0% | |
GAATTCGATGGGGACTTGAT+TGG | - | chr1.4:31784554-31784573 | MS.gene96906:intron | 45.0% | |
GCACCAACACTTCTGTTTGA+AGG | + | chr1.4:31788662-31788681 | None:intergenic | 45.0% | |
GCTCTTTGCAAAGCTAAACG+TGG | - | chr1.4:31785193-31785212 | MS.gene96906:intron | 45.0% | |
GGGTCGAATTCCATCATCAA+CGG | + | chr1.4:31786371-31786390 | None:intergenic | 45.0% | |
GTTGTAGTACCCCTTTATCG+TGG | - | chr1.4:31787097-31787116 | MS.gene96906:CDS | 45.0% | |
TAGAAGCTCGTGATTCTCCT+CGG | + | chr1.4:31784667-31784686 | None:intergenic | 45.0% | |
TATCACAGGACAGCTGCATT+TGG | - | chr1.4:31784996-31785015 | MS.gene96906:intron | 45.0% | |
TCACGATTGTAGCCCTTTAG+AGG | + | chr1.4:31785914-31785933 | None:intergenic | 45.0% | |
TGATCTTATACCAGCAGTGG+TGG | + | chr1.4:31786449-31786468 | None:intergenic | 45.0% | |
TTCACAGGCTTCAGCATGTT+TGG | - | chr1.4:31784956-31784975 | MS.gene96906:intron | 45.0% | |
TTCTGTCTGACCCTTTGCTT+TGG | - | chr1.4:31784802-31784821 | MS.gene96906:intron | 45.0% | |
TTGCATGAAATGAAGCGACG+TGG | - | chr1.4:31788904-31788923 | MS.gene96906:intron | 45.0% | |
! | ACTCGTCAGGCTTGTCTTTT+AGG | - | chr1.4:31787706-31787725 | MS.gene96906:CDS | 45.0% |
! | CAATGTTAACGGAGGTGCAA+TGG | - | chr1.4:31788398-31788417 | MS.gene96906:intron | 45.0% |
! | CATTGGAAGGAGGCAGTTTT+GGG | + | chr1.4:31785978-31785997 | None:intergenic | 45.0% |
! | CCCTTGCATTCTATCGATTG+TGG | - | chr1.4:31787135-31787154 | MS.gene96906:intron | 45.0% |
! | CGTATGGCTGCATTTTATGC+TGG | - | chr1.4:31785461-31785480 | MS.gene96906:intron | 45.0% |
! | CTTCTGTTTGAAGGTGTGTC+TGG | + | chr1.4:31788653-31788672 | None:intergenic | 45.0% |
! | GATTTCTCCTCGCCAGTTTT+TGG | + | chr1.4:31786337-31786356 | None:intergenic | 45.0% |
! | GCGATTGGCAACATTTTCAG+AGG | + | chr1.4:31786008-31786027 | None:intergenic | 45.0% |
! | GTCACCATTTCCGTTGATGA+TGG | - | chr1.4:31786358-31786377 | MS.gene96906:intron | 45.0% |
! | GTTGATAGGTTGAGTCTCAC+AGG | - | chr1.4:31786158-31786177 | MS.gene96906:intron | 45.0% |
! | TTTTATCTCTCCACCTCAGG+AGG | + | chr1.4:31787830-31787849 | None:intergenic | 45.0% |
!! | ATTGTGAGCAGGTACTGGAA+TGG | - | chr1.4:31789050-31789069 | MS.gene96906:intron | 45.0% |
!! | CCAATCGCTTTGGAGTTTCA+AGG | - | chr1.4:31786020-31786039 | MS.gene96906:intron | 45.0% |
!! | TTGTGAGCAGGTACTGGAAT+GGG | - | chr1.4:31789051-31789070 | MS.gene96906:intron | 45.0% |
!! | ATTAAATGAAAAAATTAATT+TGG | + | chr1.4:31785862-31785881 | None:intergenic | 5.0% |
!!! | ATCATTTTAAATAATTATAT+AGG | + | chr1.4:31787419-31787438 | None:intergenic | 5.0% |
!!! | ATTTCAATTTATTTTATTTT+TGG | - | chr1.4:31788851-31788870 | MS.gene96906:intron | 5.0% |
!!! | TCATTTTAAATAATTATATA+GGG | + | chr1.4:31787418-31787437 | None:intergenic | 5.0% |
!!! | TTTAAAATGATTATTAATTA+CGG | - | chr1.4:31787428-31787447 | MS.gene96906:intron | 5.0% |
!!! | TTTCAATTTATTTTATTTTT+GGG | - | chr1.4:31788852-31788871 | MS.gene96906:intron | 5.0% |
ACAGGCTTCAGCATGTTTGG+CGG | - | chr1.4:31784959-31784978 | MS.gene96906:intron | 50.0% | |
ACTGATCCATCCCATGCCAT+TGG | + | chr1.4:31785793-31785812 | None:intergenic | 50.0% | |
AGCTTTGCAATGCCCGCAAA+GGG | - | chr1.4:31789112-31789131 | MS.gene96906:CDS | 50.0% | |
AGGAAAACGGTTGGGATGTG+TGG | - | chr1.4:31787785-31787804 | MS.gene96906:intron | 50.0% | |
AGGTAATCCCCATTGGAAGG+AGG | + | chr1.4:31785988-31786007 | None:intergenic | 50.0% | |
CAAAAGGGGCTACCCATTCT+TGG | - | chr1.4:31786611-31786630 | MS.gene96906:intron | 50.0% | |
CAACTGGAATTGCAGCAGCT+GGG | + | chr1.4:31788179-31788198 | None:intergenic | 50.0% | |
CAGAGGTAATCCCCATTGGA+AGG | + | chr1.4:31785991-31786010 | None:intergenic | 50.0% | |
CCAAAACTGCCTCCTTCCAA+TGG | - | chr1.4:31785976-31785995 | MS.gene96906:intron | 50.0% | |
CTCTAGACCTGCAGCTTTCA+CGG | + | chr1.4:31788202-31788221 | None:intergenic | 50.0% | |
GAAAAGGTTGTCCCCTTTGC+GGG | + | chr1.4:31789127-31789146 | None:intergenic | 50.0% | |
GATGGGGACTTGATTGGTGT+TGG | - | chr1.4:31784560-31784579 | MS.gene96906:intron | 50.0% | |
GGCGCAAGTATTCATCTTCG+AGG | - | chr1.4:31786989-31787008 | MS.gene96906:intron | 50.0% | |
TATCCAAGGATGCTCGCTAG+TGG | - | chr1.4:31789148-31789167 | MS.gene96906:CDS | 50.0% | |
TCACAGGACAGCTGCATTTG+GGG | - | chr1.4:31784998-31785017 | MS.gene96906:intron | 50.0% | |
TGAAATGAAGCGACGTGGCA+AGG | - | chr1.4:31788909-31788928 | MS.gene96906:intron | 50.0% | |
TTCCTGCCTTTCGTCCATCA+GGG | - | chr1.4:31787484-31787503 | MS.gene96906:intron | 50.0% | |
! | AACGGAGGTGCAATGGCAAT+TGG | - | chr1.4:31788405-31788424 | MS.gene96906:intron | 50.0% |
! | ACGGAGGTGCAATGGCAATT+GGG | - | chr1.4:31788406-31788425 | MS.gene96906:intron | 50.0% |
! | CATACGTGTACTGGTGTGTG+TGG | - | chr1.4:31788991-31789010 | MS.gene96906:intron | 50.0% |
! | CCATTGGAAGGAGGCAGTTT+TGG | + | chr1.4:31785979-31785998 | None:intergenic | 50.0% |
! | CTGTTTCCCTGATGGACGAA+AGG | + | chr1.4:31787493-31787512 | None:intergenic | 50.0% |
! | TGATGGACGAAAGGCAGGAA+GGG | + | chr1.4:31787484-31787503 | None:intergenic | 50.0% |
! | TGTTCGGTTGCAGGGAGTAT+CGG | + | chr1.4:31788056-31788075 | None:intergenic | 50.0% |
!! | GAGACAGTGCTGCTTATCAC+AGG | - | chr1.4:31784982-31785001 | MS.gene96906:intron | 50.0% |
!! | GGTGTTGATCCTGCCATCAT+GGG | - | chr1.4:31788147-31788166 | MS.gene96906:intron | 50.0% |
!! | TGGTGTTGATCCTGCCATCA+TGG | - | chr1.4:31788146-31788165 | MS.gene96906:intron | 50.0% |
!! | TGTGAGCAGGTACTGGAATG+GGG | - | chr1.4:31789052-31789071 | MS.gene96906:intron | 50.0% |
!!! | GCAGCTGCTGTTTTTGAGAG+AGG | - | chr1.4:31789075-31789094 | MS.gene96906:CDS | 50.0% |
AAAGACGGAACCACCACTGC+TGG | - | chr1.4:31786436-31786455 | MS.gene96906:intron | 55.0% | |
AACCGGCACAGTCTCTGGAT+GGG | + | chr1.4:31785567-31785586 | None:intergenic | 55.0% | |
CAGGCTTCAGCATGTTTGGC+GGG | - | chr1.4:31784960-31784979 | MS.gene96906:intron | 55.0% | |
CTCTCTGCGCATACGTGTAC+TGG | - | chr1.4:31788982-31789001 | MS.gene96906:intron | 55.0% | |
CTTCCTGCCTTTCGTCCATC+AGG | - | chr1.4:31787483-31787502 | MS.gene96906:intron | 55.0% | |
GAGCTTTGCAATGCCCGCAA+AGG | - | chr1.4:31789111-31789130 | MS.gene96906:CDS | 55.0% | |
GATCCTGCCATCATGGGTGT+TGG | - | chr1.4:31788153-31788172 | MS.gene96906:intron | 55.0% | |
GCAACTGGAATTGCAGCAGC+TGG | + | chr1.4:31788180-31788199 | None:intergenic | 55.0% | |
GCTTTGCAATGCCCGCAAAG+GGG | - | chr1.4:31789113-31789132 | MS.gene96906:CDS | 55.0% | |
GTAGCTGCTGCTATAAGGGC+TGG | - | chr1.4:31785635-31785654 | MS.gene96906:intron | 55.0% | |
TAACCGGCACAGTCTCTGGA+TGG | + | chr1.4:31785568-31785587 | None:intergenic | 55.0% | |
TGTGGACCCAAAAACTGGCG+AGG | - | chr1.4:31786327-31786346 | MS.gene96906:intron | 55.0% | |
! | CTGATGGACGAAAGGCAGGA+AGG | + | chr1.4:31787485-31787504 | None:intergenic | 55.0% |
! | GTCGGTTCTGTATTGGGAGC+TGG | - | chr1.4:31785416-31785435 | MS.gene96906:intron | 55.0% |
! | TTCCCTGATGGACGAAAGGC+AGG | + | chr1.4:31787489-31787508 | None:intergenic | 55.0% |
!! | ATCCAGAGACTGTGCCGGTT+AGG | - | chr1.4:31785567-31785586 | MS.gene96906:intron | 55.0% |
!! | GTGAGCAGGTACTGGAATGG+GGG | - | chr1.4:31789053-31789072 | MS.gene96906:intron | 55.0% |
ACCGGCACAGTCTCTGGATG+GGG | + | chr1.4:31785566-31785585 | None:intergenic | 60.0% | |
AGCTGGGCCAACACCCATGA+TGG | + | chr1.4:31788163-31788182 | None:intergenic | 60.0% | |
CCAGTTGCCGTGAAAGCTGC+AGG | - | chr1.4:31788192-31788211 | MS.gene96906:intron | 60.0% | |
CCTGCAGCTTTCACGGCAAC+TGG | + | chr1.4:31788195-31788214 | None:intergenic | 60.0% | |
CGTGGCAAGGACTGCCGATA+TGG | - | chr1.4:31788922-31788941 | MS.gene96906:intron | 60.0% | |
CTCCAGCACCATCACTCACC+TGG | + | chr1.4:31786559-31786578 | None:intergenic | 60.0% | |
GGTTGAGTCTCACAGGCGAG+CGG | - | chr1.4:31786165-31786184 | MS.gene96906:intron | 60.0% | |
GTCCTAACCGGCACAGTCTC+TGG | + | chr1.4:31785572-31785591 | None:intergenic | 60.0% | |
TCCCCATCCAGAGACTGTGC+CGG | - | chr1.4:31785562-31785581 | MS.gene96906:intron | 60.0% | |
! | AGCCAGGTGAGTGATGGTGC+TGG | - | chr1.4:31786554-31786573 | MS.gene96906:intron | 60.0% |
! | GGGCATCCTTTGGGAGCAAC+AGG | - | chr1.4:31788426-31788445 | MS.gene96906:intron | 60.0% |
!! | CGGTTGCAGGGAGTATCGGT+AGG | + | chr1.4:31788052-31788071 | None:intergenic | 60.0% |
GGGCCAACACCCATGATGGC+AGG | + | chr1.4:31788159-31788178 | None:intergenic | 65.0% | |
GCGGCTGCTGCTACTGCTGC+TGG | - | chr1.4:31786184-31786203 | MS.gene96906:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 31784146 | 31789167 | 31784146 | ID=MS.gene96906 |
chr1.4 | mRNA | 31784146 | 31789167 | 31784146 | ID=MS.gene96906.t1;Parent=MS.gene96906 |
chr1.4 | exon | 31789075 | 31789167 | 31789075 | ID=MS.gene96906.t1.exon1;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31789075 | 31789167 | 31789075 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31788274 | 31788350 | 31788274 | ID=MS.gene96906.t1.exon2;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31788274 | 31788350 | 31788274 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31788049 | 31788133 | 31788049 | ID=MS.gene96906.t1.exon3;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31788049 | 31788133 | 31788049 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31787822 | 31787948 | 31787822 | ID=MS.gene96906.t1.exon4;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31787822 | 31787948 | 31787822 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31787642 | 31787740 | 31787642 | ID=MS.gene96906.t1.exon5;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31787642 | 31787740 | 31787642 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31787491 | 31787558 | 31787491 | ID=MS.gene96906.t1.exon6;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31787491 | 31787558 | 31787491 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31787250 | 31787357 | 31787250 | ID=MS.gene96906.t1.exon7;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31787250 | 31787357 | 31787250 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31787070 | 31787147 | 31787070 | ID=MS.gene96906.t1.exon8;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31787070 | 31787147 | 31787070 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31786856 | 31786988 | 31786856 | ID=MS.gene96906.t1.exon9;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31786856 | 31786988 | 31786856 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31786671 | 31786767 | 31786671 | ID=MS.gene96906.t1.exon10;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31786671 | 31786767 | 31786671 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31785059 | 31785182 | 31785059 | ID=MS.gene96906.t1.exon11;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31785059 | 31785182 | 31785059 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31784866 | 31784974 | 31784866 | ID=MS.gene96906.t1.exon12;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31784866 | 31784974 | 31784866 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31784349 | 31784432 | 31784349 | ID=MS.gene96906.t1.exon13;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31784349 | 31784432 | 31784349 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
chr1.4 | exon | 31784146 | 31784252 | 31784146 | ID=MS.gene96906.t1.exon14;Parent=MS.gene96906.t1 |
chr1.4 | CDS | 31784146 | 31784252 | 31784146 | ID=cds.MS.gene96906.t1;Parent=MS.gene96906.t1 |
Gene Sequence |
Protein sequence |