Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020954.t1 | XP_003618039.1 | 99.3 | 407 | 2 | 1 | 1 | 406 | 1 | 407 | 7.10E-219 | 769.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020954.t1 | Q8S4Y1 | 84.6 | 402 | 62 | 0 | 5 | 406 | 2 | 403 | 2.4e-191 | 669.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020954.t1 | G7K0L3 | 99.3 | 407 | 2 | 1 | 1 | 406 | 1 | 407 | 5.2e-219 | 769.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene020954 | MS.gene028573 | PPI |
MS.gene020954 | MS.gene64334 | PPI |
MS.gene020954 | MS.gene062501 | PPI |
MS.gene020954 | MS.gene96906 | PPI |
MS.gene020954 | MS.gene40160 | PPI |
MS.gene020954 | MS.gene53674 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020954.t1 | MTR_5g098310 | 99.263 | 407 | 2 | 1 | 1 | 406 | 1 | 407 | 0.0 | 806 |
MS.gene020954.t1 | MTR_0449s0040 | 98.567 | 349 | 4 | 1 | 1 | 348 | 1 | 349 | 0.0 | 694 |
MS.gene020954.t1 | MTR_4g134090 | 80.353 | 397 | 78 | 0 | 10 | 406 | 2 | 398 | 0.0 | 668 |
MS.gene020954.t1 | MTR_4g134090 | 80.867 | 392 | 75 | 0 | 15 | 406 | 14 | 405 | 0.0 | 662 |
MS.gene020954.t1 | MTR_4g134090 | 78.884 | 251 | 53 | 0 | 10 | 260 | 2 | 252 | 4.40e-150 | 427 |
MS.gene020954.t1 | MTR_4g022430 | 37.685 | 406 | 218 | 12 | 15 | 404 | 45 | 431 | 1.20e-64 | 213 |
MS.gene020954.t1 | MTR_1g047210 | 34.568 | 405 | 232 | 9 | 15 | 404 | 52 | 438 | 7.43e-58 | 196 |
MS.gene020954.t1 | MTR_0837s0020 | 42.017 | 119 | 65 | 3 | 23 | 138 | 808 | 925 | 1.91e-15 | 79.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020954.t1 | AT5G48230 | 84.577 | 402 | 62 | 0 | 5 | 406 | 2 | 403 | 0.0 | 672 |
MS.gene020954.t1 | AT5G47720 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
MS.gene020954.t1 | AT5G47720 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
MS.gene020954.t1 | AT5G47720 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
MS.gene020954.t1 | AT5G47720 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
MS.gene020954.t1 | AT5G48230 | 84.635 | 397 | 61 | 0 | 10 | 406 | 2 | 398 | 0.0 | 662 |
MS.gene020954.t1 | AT5G47720 | 79.337 | 392 | 81 | 0 | 15 | 406 | 21 | 412 | 0.0 | 656 |
MS.gene020954.t1 | AT1G04710 | 35.135 | 407 | 227 | 9 | 15 | 404 | 43 | 429 | 2.60e-63 | 210 |
MS.gene020954.t1 | AT2G33150 | 34.783 | 414 | 241 | 8 | 4 | 404 | 40 | 437 | 1.05e-60 | 204 |
MS.gene020954.t1 | AT5G48880 | 37.101 | 407 | 221 | 12 | 15 | 404 | 7 | 395 | 8.87e-60 | 200 |
MS.gene020954.t1 | AT5G48880 | 37.101 | 407 | 221 | 12 | 15 | 404 | 50 | 438 | 1.23e-59 | 201 |
MS.gene020954.t1 | AT5G48880 | 37.101 | 407 | 221 | 12 | 15 | 404 | 50 | 438 | 1.23e-59 | 201 |
MS.gene020954.t1 | AT5G48880 | 37.101 | 407 | 221 | 12 | 15 | 404 | 50 | 438 | 1.23e-59 | 201 |
Find 126 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAACGTCCTTAGTGCTAATT+TGG | 0.180846 | 5.4:-77736382 | MS.gene020954:CDS |
GATATGTAGCTGCTCTTAAA+AGG | 0.206062 | 5.4:-77736446 | MS.gene020954:intron |
GGCATTGAAGCTTGGGCTTC+AGG | 0.214435 | 5.4:-77734073 | MS.gene020954:CDS |
TCGTATCCTGGTAACACTTT+TGG | 0.258252 | 5.4:-77732537 | MS.gene020954:CDS |
CTTGCAAATCAGAAACTTCT+TGG | 0.274997 | 5.4:-77733695 | MS.gene020954:CDS |
ATTGTGGAAGAAGTATTCTT+TGG | 0.277800 | 5.4:-77736405 | MS.gene020954:CDS |
CCCTGCATTGGCAATAGCTT+TGG | 0.307145 | 5.4:+77733856 | None:intergenic |
CCTTATGCTGGAAGCATTGC+CGG | 0.313728 | 5.4:+77734716 | None:intergenic |
CCTGCATTGGCAATAGCTTT+GGG | 0.320450 | 5.4:+77733857 | None:intergenic |
ACACCAATGGGTGGGTTTCT+TGG | 0.326350 | 5.4:-77736597 | MS.gene020954:CDS |
CCCAAGAGAGTGGTTACTTT+GGG | 0.327741 | 5.4:-77735717 | MS.gene020954:CDS |
TGCTGCGCAAAGTATTCAAT+TGG | 0.331118 | 5.4:-77736158 | MS.gene020954:CDS |
AATACTTCTTCCACAATTGC+TGG | 0.343408 | 5.4:+77736411 | None:intergenic |
TCCTTGTCAACAATTGTTGA+TGG | 0.368042 | 5.4:+77735652 | None:intergenic |
AACGTCCTTAGTGCTAATTT+GGG | 0.374832 | 5.4:-77736381 | MS.gene020954:CDS |
TGGTGCTGCTGCATTAGTTT+TGG | 0.381346 | 5.4:-77734109 | MS.gene020954:CDS |
CCAAGAGCAGCTTGTCTAGC+AGG | 0.397023 | 5.4:+77736351 | None:intergenic |
TTGTGGAAGAAGTATTCTTT+GGG | 0.400326 | 5.4:-77736404 | MS.gene020954:CDS |
TGCACAGATGTTTGCATCGT+TGG | 0.404964 | 5.4:-77736630 | MS.gene020954:intron |
TGTCTATAAGGATGTAGGTA+TGG | 0.406710 | 5.4:-77735919 | MS.gene020954:CDS |
GAGAGAAGGCATTGAAGCTT+GGG | 0.409803 | 5.4:-77734080 | MS.gene020954:CDS |
TGGTTTGTGGGATGTCTATA+AGG | 0.412478 | 5.4:-77735931 | MS.gene020954:CDS |
GTTAACAAAGTTTGTGCGTC+AGG | 0.413289 | 5.4:-77736294 | MS.gene020954:CDS |
CTTGCTTCTGCCAGGTACTT+AGG | 0.414540 | 5.4:+77736085 | None:intergenic |
ATCACTCCGGTTGAAGTCTC+TGG | 0.417791 | 5.4:-77735688 | MS.gene020954:CDS |
CCTGCTAGACAAGCTGCTCT+TGG | 0.430204 | 5.4:-77736351 | MS.gene020954:CDS |
GTATCATTGGGCCATCCTCT+TGG | 0.431528 | 5.4:-77732572 | MS.gene020954:CDS |
TGAAATTAATGAAGCCTTTG+CGG | 0.433981 | 5.4:-77733807 | MS.gene020954:intron |
GAAACTTCTTGGACTAGATT+CGG | 0.439347 | 5.4:-77733684 | MS.gene020954:intron |
GGAGCTGTTGTAAATAACTC+TGG | 0.441062 | 5.4:+77733893 | None:intergenic |
GCCCAAGAGAGTGGTTACTT+TGG | 0.441646 | 5.4:-77735718 | MS.gene020954:CDS |
CCCAAAGCTATTGCCAATGC+AGG | 0.447182 | 5.4:-77733857 | MS.gene020954:CDS |
CAAACTTCGACCAAGCTTCA+AGG | 0.448532 | 5.4:-77734760 | MS.gene020954:CDS |
TGGATATGCTGATGCTGCTC+AGG | 0.450989 | 5.4:-77734034 | MS.gene020954:intron |
AGCTATTGCCAATGCAGGGC+TGG | 0.451948 | 5.4:-77733852 | MS.gene020954:CDS |
ACCCAAAGTAACCACTCTCT+TGG | 0.466065 | 5.4:+77735716 | None:intergenic |
CGTTGTTGTGGCCGGTGGTA+TGG | 0.469342 | 5.4:-77736125 | MS.gene020954:CDS |
CCCAAAGTAACCACTCTCTT+GGG | 0.471983 | 5.4:+77735717 | None:intergenic |
GGACACGATTCACTAGTTGA+TGG | 0.472023 | 5.4:-77735966 | MS.gene020954:CDS |
GGAGAGAAGGCATTGAAGCT+TGG | 0.472796 | 5.4:-77734081 | MS.gene020954:CDS |
ATATTGACCTTGCTTCTGCC+AGG | 0.474178 | 5.4:+77736077 | None:intergenic |
CCGGCAATGCTTCCAGCATA+AGG | 0.477086 | 5.4:-77734716 | MS.gene020954:intron |
TGGTCGAAGTTTGCGTAACT+TGG | 0.477342 | 5.4:+77734770 | None:intergenic |
TCTGTACCTGCCACCAAGCT+AGG | 0.481327 | 5.4:-77736564 | MS.gene020954:CDS |
TGAAGTCTCCAGCCCTGCAT+TGG | 0.486165 | 5.4:+77733844 | None:intergenic |
GTTGACAAGGACGAGGGCCT+AGG | 0.486835 | 5.4:-77735640 | MS.gene020954:CDS |
ACAAGATATCAACCTTATGC+TGG | 0.493081 | 5.4:+77734704 | None:intergenic |
GTCTATAAGGATGTAGGTAT+GGG | 0.493294 | 5.4:-77735918 | MS.gene020954:CDS |
CGGTTGAAGTCTCTGGTGGA+AGG | 0.493762 | 5.4:-77735681 | MS.gene020954:CDS |
CTTCCACCAGAGACTTCAAC+CGG | 0.493952 | 5.4:+77735682 | None:intergenic |
GGTCTTCTCTTGTTATCGAA+TGG | 0.499232 | 5.4:+77735868 | None:intergenic |
TTCAGGAAAGGATCCCGCCT+TGG | 0.504376 | 5.4:-77735987 | MS.gene020954:intron |
AGACAAGCTGCTCTTGGAGC+AGG | 0.505123 | 5.4:-77736345 | MS.gene020954:CDS |
CGACCAAGCTTCAAGGAGAC+TGG | 0.505206 | 5.4:-77734753 | MS.gene020954:CDS |
CCTCCAGTCTCCTTGAAGCT+TGG | 0.506596 | 5.4:+77734750 | None:intergenic |
CTAGGCTCGATAGCTATTGA+AGG | 0.507513 | 5.4:-77736546 | MS.gene020954:intron |
GGTGTTTGCAACGGAGGAGG+TGG | 0.510695 | 5.4:-77732025 | MS.gene020954:CDS |
AAGAGAGTGGTTACTTTGGG+TGG | 0.510955 | 5.4:-77735714 | MS.gene020954:CDS |
GCTTTGGGGATGGCAATGGC+TGG | 0.511880 | 5.4:+77733872 | None:intergenic |
TAGTGAATCGTGTCCAAGGC+GGG | 0.514939 | 5.4:+77735974 | None:intergenic |
TGGTGTTGCACGTACACCAA+TGG | 0.516183 | 5.4:-77736610 | MS.gene020954:CDS |
TTGCAGTGGTGCTCGTATCC+TGG | 0.516892 | 5.4:-77732549 | MS.gene020954:CDS |
GACACGATTCACTAGTTGAT+GGG | 0.517196 | 5.4:-77735965 | MS.gene020954:CDS |
AATAGCTATCGAGCCTAGCT+TGG | 0.518026 | 5.4:+77736551 | None:intergenic |
TTTGGGCGATTACCTTTCCT+AGG | 0.523656 | 5.4:+77735623 | None:intergenic |
GGCCATCCTCTTGGTTGCAG+TGG | 0.525412 | 5.4:-77732563 | MS.gene020954:CDS |
CAATGTTGATCCAGCAATTG+TGG | 0.526777 | 5.4:-77736421 | MS.gene020954:CDS |
GCTGCGCAAAGTATTCAATT+GGG | 0.527113 | 5.4:-77736157 | MS.gene020954:CDS |
TGGTGCATCTGCCCTTGTTG+TGG | 0.528344 | 5.4:-77732005 | MS.gene020954:CDS |
GATGTTGAAAGATGGTTTGT+GGG | 0.529197 | 5.4:-77735943 | MS.gene020954:CDS |
GGATGTTGAAAGATGGTTTG+TGG | 0.529632 | 5.4:-77735944 | MS.gene020954:CDS |
CACAATTGCTGGATCAACAT+TGG | 0.530049 | 5.4:+77736422 | None:intergenic |
ACATGGTGGAGCTGTATCAT+TGG | 0.532197 | 5.4:-77732585 | MS.gene020954:CDS |
ATATGTAGCTGCTCTTAAAA+GGG | 0.533700 | 5.4:-77736445 | MS.gene020954:intron |
TTTCCATCGATCAATGGCTC+CGG | 0.534726 | 5.4:-77737078 | None:intergenic |
GTTGAAGTCTCTGGTGGAAG+GGG | 0.537975 | 5.4:-77735679 | MS.gene020954:CDS |
TGGGATGTCTATAAGGATGT+AGG | 0.541044 | 5.4:-77735924 | MS.gene020954:CDS |
GCCATTAATTCCTACCGCAA+AGG | 0.542812 | 5.4:+77733793 | None:intergenic |
CTTTGGGTGGGAAATCACTC+CGG | 0.551515 | 5.4:-77735701 | MS.gene020954:CDS |
GGTTGAAGTCTCTGGTGGAA+GGG | 0.553470 | 5.4:-77735680 | MS.gene020954:CDS |
GGTGTTGCACGTACACCAAT+GGG | 0.554411 | 5.4:-77736609 | MS.gene020954:CDS |
CACCACTGCAACCAAGAGGA+TGG | 0.555857 | 5.4:+77732561 | None:intergenic |
GTTTGTGCGTCAGGAATGAA+AGG | 0.559395 | 5.4:-77736285 | MS.gene020954:intron |
GGTGGTGTTTGCAACGGAGG+AGG | 0.560817 | 5.4:-77732028 | MS.gene020954:CDS |
GTTGATGGGATGTTGAAAGA+TGG | 0.562395 | 5.4:-77735951 | MS.gene020954:CDS |
AATAGCTTTGGGGATGGCAA+TGG | 0.565250 | 5.4:+77733868 | None:intergenic |
CATGGTGGAGCTGTATCATT+GGG | 0.570697 | 5.4:-77732584 | MS.gene020954:CDS |
CAGGCAAAAGTAAATGTACA+TGG | 0.572291 | 5.4:-77732602 | MS.gene020954:CDS |
CAACTAGTGAATCGTGTCCA+AGG | 0.573234 | 5.4:+77735970 | None:intergenic |
ATAAATGACGTTGTTGTGGC+CGG | 0.573486 | 5.4:-77736133 | MS.gene020954:CDS |
AATGGAAAGTACGGTGTAGG+TGG | 0.576859 | 5.4:-77732046 | MS.gene020954:CDS |
GAGCTGTTGTAAATAACTCT+GGG | 0.576934 | 5.4:+77733894 | None:intergenic |
GGAATTTCTGCCCAAGAGAG+TGG | 0.577950 | 5.4:-77735727 | MS.gene020954:CDS |
AGAGAGTGGTTACTTTGGGT+GGG | 0.579880 | 5.4:-77735713 | MS.gene020954:CDS |
ATGACCTCTAGGCTGTATAG+AGG | 0.580039 | 5.4:+77737040 | None:intergenic |
AGCTATCGAGCCTAGCTTGG+TGG | 0.583813 | 5.4:+77736554 | None:intergenic |
GAGGAGTCTGAAGATGCTGC+CGG | 0.592288 | 5.4:+77737059 | None:intergenic |
TTCACAGGAGCTCCACAACA+AGG | 0.592999 | 5.4:+77731993 | None:intergenic |
ATCGAGCCTAGCTTGGTGGC+AGG | 0.593460 | 5.4:+77736558 | None:intergenic |
CTGCATTGGCAATAGCTTTG+GGG | 0.597611 | 5.4:+77733858 | None:intergenic |
GTAGGTGGTGTTTGCAACGG+AGG | 0.598679 | 5.4:-77732031 | MS.gene020954:CDS |
CTTGCCCCAAATTAGCACTA+AGG | 0.599342 | 5.4:+77736376 | None:intergenic |
ACTCCGGTTGAAGTCTCTGG+TGG | 0.599869 | 5.4:-77735685 | MS.gene020954:CDS |
CAAGGACGAGGGCCTAGGAA+AGG | 0.607320 | 5.4:-77735635 | MS.gene020954:intron |
GTACCAAGAAACCCACCCAT+TGG | 0.608246 | 5.4:+77736594 | None:intergenic |
AACAATTGTTGACAAGGACG+AGG | 0.609353 | 5.4:-77735647 | MS.gene020954:CDS |
ATTGGCAATAGCTTTGGGGA+TGG | 0.613894 | 5.4:+77733862 | None:intergenic |
GTCTAGTGTACCTAAGTACC+TGG | 0.616573 | 5.4:-77736095 | MS.gene020954:CDS |
ACTGGAGGCTCTGTTACTGC+CGG | 0.620647 | 5.4:-77734735 | MS.gene020954:CDS |
CTAAGTACCTGGCAGAAGCA+AGG | 0.621882 | 5.4:-77736084 | MS.gene020954:intron |
CCAAAGCTATTGCCAATGCA+GGG | 0.624619 | 5.4:-77733856 | MS.gene020954:CDS |
GGTGTAGGTGGTGTTTGCAA+CGG | 0.625440 | 5.4:-77732034 | MS.gene020954:CDS |
TTCGATAACAAGAGAAGACC+AGG | 0.630164 | 5.4:-77735865 | MS.gene020954:intron |
ACCATCAACAATTGTTGACA+AGG | 0.631110 | 5.4:-77735653 | MS.gene020954:CDS |
TTGCACGTACACCAATGGGT+GGG | 0.631141 | 5.4:-77736605 | MS.gene020954:CDS |
GGGCATAAATGACGTTGTTG+TGG | 0.634678 | 5.4:-77736137 | MS.gene020954:CDS |
GTTGCACGTACACCAATGGG+TGG | 0.635819 | 5.4:-77736606 | MS.gene020954:CDS |
AATGACGTTGTTGTGGCCGG+TGG | 0.650291 | 5.4:-77736130 | MS.gene020954:CDS |
CGAGCACCACTGCAACCAAG+AGG | 0.657848 | 5.4:+77732557 | None:intergenic |
ACGTCCTTAGTGCTAATTTG+GGG | 0.662324 | 5.4:-77736380 | MS.gene020954:CDS |
CCAAGCTTCAAGGAGACTGG+AGG | 0.663840 | 5.4:-77734750 | MS.gene020954:CDS |
TCACAGGAGCTCCACAACAA+GGG | 0.671465 | 5.4:+77731994 | None:intergenic |
ACAATTGTTGACAAGGACGA+GGG | 0.682480 | 5.4:-77735646 | MS.gene020954:CDS |
GCAAAAGTAAATGTACATGG+TGG | 0.690007 | 5.4:-77732599 | MS.gene020954:CDS |
CTAGTGAATCGTGTCCAAGG+CGG | 0.721205 | 5.4:+77735973 | None:intergenic |
GACTCCTCTATACAGCCTAG+AGG | 0.751586 | 5.4:-77737044 | MS.gene020954:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATAAATTTTAAATATTT+GGG | + | chr5.4:77733558-77733577 | None:intergenic | 0.0% |
!!! | TTTAATAAATTTTAAATATT+TGG | + | chr5.4:77733559-77733578 | None:intergenic | 0.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr5.4:77735594-77735613 | None:intergenic | 100.0% |
!! | AATAGTTATTCATTAGTAAA+AGG | + | chr5.4:77736388-77736407 | None:intergenic | 15.0% |
!! | GAAAAAAGATATCAATATAT+TGG | + | chr5.4:77734244-77734263 | None:intergenic | 15.0% |
!!! | ATAACTTTTTTATACATCTA+TGG | - | chr5.4:77734148-77734167 | MS.gene020954:intron | 15.0% |
!!! | ATCTGATTCATTTAAATTTT+TGG | - | chr5.4:77732074-77732093 | MS.gene020954:intron | 15.0% |
!!! | TTATATTTTGATAAACCTAT+TGG | - | chr5.4:77734633-77734652 | MS.gene020954:intron | 15.0% |
!!! | TTTTTTGGTAATAAAATACA+TGG | - | chr5.4:77734456-77734475 | MS.gene020954:intron | 15.0% |
!! | AAAAATTCTTTAACACTATC+AGG | - | chr5.4:77733694-77733713 | MS.gene020954:CDS | 20.0% |
!! | AAACAAAATAATTCATGATG+AGG | + | chr5.4:77736266-77736285 | None:intergenic | 20.0% |
!! | AATATAATGTCCTCAAAATA+AGG | - | chr5.4:77733747-77733766 | MS.gene020954:intron | 20.0% |
!! | AATTCTGTTTGTAATAAAGT+GGG | + | chr5.4:77736181-77736200 | None:intergenic | 20.0% |
!! | ATAAAAAAGTTATGCAGAAA+CGG | + | chr5.4:77734141-77734160 | None:intergenic | 20.0% |
!! | ATATAATGTCCTCAAAATAA+GGG | - | chr5.4:77733748-77733767 | MS.gene020954:intron | 20.0% |
!! | ATGATATACATAAGTTCATA+TGG | - | chr5.4:77736853-77736872 | MS.gene020954:intron | 20.0% |
!! | TAACATGCCATAAATAATTA+AGG | - | chr5.4:77735726-77735745 | MS.gene020954:CDS | 20.0% |
!! | TAATTCTGTTTGTAATAAAG+TGG | + | chr5.4:77736182-77736201 | None:intergenic | 20.0% |
!! | TGCAAAATAATAGTTATTTG+AGG | + | chr5.4:77736439-77736458 | None:intergenic | 20.0% |
!! | TGTAGTTTCTCAAAATTTAT+TGG | + | chr5.4:77736036-77736055 | None:intergenic | 20.0% |
!! | TTATGTAGTTAAACTTAACA+AGG | + | chr5.4:77736129-77736148 | None:intergenic | 20.0% |
!! | TTTAGACTAATTGAATCAAA+AGG | + | chr5.4:77736963-77736982 | None:intergenic | 20.0% |
!!! | AAAAGCTATTATTTTTCATC+AGG | - | chr5.4:77736336-77736355 | MS.gene020954:CDS | 20.0% |
!!! | AGTTTATCAATTTTAGTGAA+TGG | - | chr5.4:77734591-77734610 | MS.gene020954:intron | 20.0% |
!!! | ATATTTGTATTTTGCATGTT+AGG | - | chr5.4:77736148-77736167 | MS.gene020954:CDS | 20.0% |
!!! | ATTTGTAGTGTTTTATATGT+TGG | - | chr5.4:77735102-77735121 | MS.gene020954:intron | 20.0% |
!!! | ATTTTGAGGACATTATATTA+AGG | + | chr5.4:77733746-77733765 | None:intergenic | 20.0% |
!!! | GAAAAATAATAGCTTTTGTT+TGG | + | chr5.4:77736333-77736352 | None:intergenic | 20.0% |
!!! | GGATATTTTTGTCAATTTTT+TGG | - | chr5.4:77734441-77734460 | MS.gene020954:intron | 20.0% |
!!! | TAGTAGTAATCAAATTTTGA+TGG | + | chr5.4:77733774-77733793 | None:intergenic | 20.0% |
!!! | TATTAAACTTGTTCATTCAT+CGG | + | chr5.4:77732849-77732868 | None:intergenic | 20.0% |
!!! | TCAAATAACTATTATTTTGC+AGG | - | chr5.4:77736438-77736457 | MS.gene020954:CDS | 20.0% |
!!! | TCTTTGAAAAACAATATGAA+GGG | + | chr5.4:77735898-77735917 | None:intergenic | 20.0% |
!!! | TTCATTTTCATTAAAAACCA+AGG | + | chr5.4:77734910-77734929 | None:intergenic | 20.0% |
!!! | TTTTGTTTGGATCAATATAT+TGG | + | chr5.4:77736320-77736339 | None:intergenic | 20.0% |
! | AAATGAATCAGATAAATGCT+AGG | + | chr5.4:77732067-77732086 | None:intergenic | 25.0% |
! | AGAAGATCAACTAAAATGAA+AGG | + | chr5.4:77732399-77732418 | None:intergenic | 25.0% |
! | AGCTCTTAAATTCTGTTTAA+TGG | - | chr5.4:77736655-77736674 | MS.gene020954:intron | 25.0% |
! | ATGAGAATATTGGTATTACA+TGG | - | chr5.4:77734039-77734058 | MS.gene020954:CDS | 25.0% |
! | CAGAAATCAATTAAAACTCA+TGG | + | chr5.4:77735328-77735347 | None:intergenic | 25.0% |
! | GTCTAAACATTATTACATAC+AGG | - | chr5.4:77736976-77736995 | MS.gene020954:intron | 25.0% |
! | TAAACTTACCTGCTTATTAT+TGG | - | chr5.4:77733957-77733976 | MS.gene020954:intron | 25.0% |
! | TCAAAATTAAACTCTTCTCA+TGG | - | chr5.4:77732369-77732388 | MS.gene020954:intron | 25.0% |
! | TGAGAATATTGGTATTACAT+GGG | - | chr5.4:77734040-77734059 | MS.gene020954:CDS | 25.0% |
! | TGATTCAATGCTAAAATTTC+AGG | - | chr5.4:77733055-77733074 | MS.gene020954:intron | 25.0% |
!! | AGTTCATATGGATTTTTAAC+TGG | - | chr5.4:77736865-77736884 | MS.gene020954:intron | 25.0% |
!! | ATTTCTGTTCAAATTGGTTT+CGG | - | chr5.4:77733230-77733249 | MS.gene020954:intron | 25.0% |
!! | CTCTTTGAAAAACAATATGA+AGG | + | chr5.4:77735899-77735918 | None:intergenic | 25.0% |
!! | GTAAGTTTAAGATTTACATG+TGG | + | chr5.4:77733946-77733965 | None:intergenic | 25.0% |
!! | TCTAACTGACTTAATGATAT+AGG | + | chr5.4:77734760-77734779 | None:intergenic | 25.0% |
!! | TTGTTGTTAGCTGATATTAT+AGG | + | chr5.4:77735701-77735720 | None:intergenic | 25.0% |
!! | TTTAATTGATTTCTGTCTGT+AGG | - | chr5.4:77735333-77735352 | MS.gene020954:intron | 25.0% |
!!! | AATGTTATTGTTGATAGTGA+TGG | - | chr5.4:77734930-77734949 | MS.gene020954:intron | 25.0% |
AAATAATTCATGATGAGGAG+TGG | + | chr5.4:77736261-77736280 | None:intergenic | 30.0% | |
AAGCAGAAAAATGGAAAGTA+CGG | - | chr5.4:77737004-77737023 | MS.gene020954:intron | 30.0% | |
AATTAAACTCTTCTCATGGT+AGG | - | chr5.4:77732373-77732392 | MS.gene020954:intron | 30.0% | |
AGCATCTTAAAACCTTTGTA+TGG | + | chr5.4:77736102-77736121 | None:intergenic | 30.0% | |
ATATGTAGCTGCTCTTAAAA+GGG | - | chr5.4:77732614-77732633 | MS.gene020954:intron | 30.0% | |
ATTTGTTCATTTCATCCAGT+AGG | - | chr5.4:77732108-77732127 | MS.gene020954:intron | 30.0% | |
CAATGCTAAAATTTCAGGAA+AGG | - | chr5.4:77733060-77733079 | MS.gene020954:intron | 30.0% | |
CATGTAAGCACATAAACTAA+TGG | + | chr5.4:77734842-77734861 | None:intergenic | 30.0% | |
CTAGTACTGCACTAAAATAA+TGG | + | chr5.4:77733984-77734003 | None:intergenic | 30.0% | |
GAAATTGCGTAATAACTACA+TGG | - | chr5.4:77734561-77734580 | MS.gene020954:intron | 30.0% | |
GAAGTTACAAAACTAGCAAA+TGG | + | chr5.4:77734179-77734198 | None:intergenic | 30.0% | |
GAATAAACATGCTGTTGTAA+AGG | - | chr5.4:77732202-77732221 | MS.gene020954:intron | 30.0% | |
GCAAAAAATTGTCTACATGA+CGG | + | chr5.4:77734738-77734757 | None:intergenic | 30.0% | |
GCTGATGTAAGAGAATTTAT+TGG | + | chr5.4:77733857-77733876 | None:intergenic | 30.0% | |
GGAGGTTCCTTAATTATTTA+TGG | + | chr5.4:77735736-77735755 | None:intergenic | 30.0% | |
GTAACTGTGTTTCATTCTTT+GGG | + | chr5.4:77735655-77735674 | None:intergenic | 30.0% | |
GTAGTTAAACTTAACAAGGA+AGG | + | chr5.4:77736125-77736144 | None:intergenic | 30.0% | |
TCTATGTATATGTATCTTGC+AGG | + | chr5.4:77733507-77733526 | None:intergenic | 30.0% | |
TGAAATTAATGAAGCCTTTG+CGG | - | chr5.4:77735252-77735271 | MS.gene020954:intron | 30.0% | |
TGAATATCAATATGAGCTGA+AGG | + | chr5.4:77735079-77735098 | None:intergenic | 30.0% | |
TGGATCAATATATTGGTCAA+TGG | + | chr5.4:77736313-77736332 | None:intergenic | 30.0% | |
TGTAACTGTGTTTCATTCTT+TGG | + | chr5.4:77735656-77735675 | None:intergenic | 30.0% | |
TGTAGTTATTACGCAATTTC+TGG | + | chr5.4:77734561-77734580 | None:intergenic | 30.0% | |
TGTGTTTGAAGAAGAAATGT+CGG | - | chr5.4:77736621-77736640 | MS.gene020954:CDS | 30.0% | |
TTAGAGATTGTCACTCATAA+TGG | + | chr5.4:77735814-77735833 | None:intergenic | 30.0% | |
TTCAATGTCAGCTAATGTAA+GGG | - | chr5.4:77734079-77734098 | MS.gene020954:CDS | 30.0% | |
TTGTTATCCAAAAAAGAGGA+GGG | + | chr5.4:77735621-77735640 | None:intergenic | 30.0% | |
! | ATAGAAGTTTAGAGCCATTA+AGG | + | chr5.4:77735574-77735593 | None:intergenic | 30.0% |
! | ATTGCACTATGTTTTCCAAT+AGG | + | chr5.4:77734651-77734670 | None:intergenic | 30.0% |
! | GGATTGATTTCTGTTCAAAT+TGG | - | chr5.4:77733224-77733243 | MS.gene020954:intron | 30.0% |
! | TCTTTAATGATTTTGCCTAC+TGG | + | chr5.4:77732126-77732145 | None:intergenic | 30.0% |
! | TTTTCTCAGCATGAGAATAT+TGG | - | chr5.4:77734029-77734048 | MS.gene020954:intron | 30.0% |
!! | AAGAGTTTAATTTTGACACG+CGG | + | chr5.4:77732365-77732384 | None:intergenic | 30.0% |
!! | AGCAATTAGGTGTTATTATG+TGG | + | chr5.4:77733812-77733831 | None:intergenic | 30.0% |
!! | ATAATGGACCAATAATAAGC+AGG | + | chr5.4:77733968-77733987 | None:intergenic | 30.0% |
!! | ATTGTGGAAGAAGTATTCTT+TGG | - | chr5.4:77732654-77732673 | MS.gene020954:intron | 30.0% |
!! | TGCCATGTTTCAAGTTATTT+GGG | + | chr5.4:77733456-77733475 | None:intergenic | 30.0% |
!! | TTGCCATGTTTCAAGTTATT+TGG | + | chr5.4:77733457-77733476 | None:intergenic | 30.0% |
!! | TTGTGGAAGAAGTATTCTTT+GGG | - | chr5.4:77732655-77732674 | MS.gene020954:intron | 30.0% |
!! | TTTAATTTTGACATGAGCCT+TGG | - | chr5.4:77734890-77734909 | MS.gene020954:intron | 30.0% |
!!! | ATGTCTGTGTTTTTTTGTAC+AGG | - | chr5.4:77733280-77733299 | MS.gene020954:intron | 30.0% |
!!! | CTCTTTTTTGGATAACAAGA+GGG | - | chr5.4:77735623-77735642 | MS.gene020954:intron | 30.0% |
AACGTCCTTAGTGCTAATTT+GGG | - | chr5.4:77732678-77732697 | MS.gene020954:intron | 35.0% | |
AATACTTCTTCCACAATTGC+TGG | + | chr5.4:77732651-77732670 | None:intergenic | 35.0% | |
ACAAGATATCAACCTTATGC+TGG | + | chr5.4:77734358-77734377 | None:intergenic | 35.0% | |
ACACAGTTACAACTTAACCT+AGG | - | chr5.4:77735665-77735684 | MS.gene020954:CDS | 35.0% | |
ACCATCAACAATTGTTGACA+AGG | - | chr5.4:77733406-77733425 | MS.gene020954:intron | 35.0% | |
AGACACATAGGAAAAGAATG+AGG | + | chr5.4:77734397-77734416 | None:intergenic | 35.0% | |
ATCATGTGAAAGTTGCAATC+TGG | - | chr5.4:77735416-77735435 | MS.gene020954:intron | 35.0% | |
CAACAATCGCAATCATTCAT+AGG | + | chr5.4:77732318-77732337 | None:intergenic | 35.0% | |
CAACTTTCACATGATGACAA+GGG | + | chr5.4:77735411-77735430 | None:intergenic | 35.0% | |
CAATCTTCAAGACACTCAAT+CGG | + | chr5.4:77735466-77735485 | None:intergenic | 35.0% | |
CAGGCAAAAGTAAATGTACA+TGG | - | chr5.4:77736457-77736476 | MS.gene020954:intron | 35.0% | |
CTTCAATGTCAGCTAATGTA+AGG | - | chr5.4:77734078-77734097 | MS.gene020954:CDS | 35.0% | |
CTTGCAAATCAGAAACTTCT+TGG | - | chr5.4:77735364-77735383 | MS.gene020954:intron | 35.0% | |
CTTGCATCTGATGAGAAATT+AGG | - | chr5.4:77736206-77736225 | MS.gene020954:intron | 35.0% | |
GAAATCAATCCCAAAATACC+TGG | + | chr5.4:77733215-77733234 | None:intergenic | 35.0% | |
GAGCTGTTGTAAATAACTCT+GGG | + | chr5.4:77735168-77735187 | None:intergenic | 35.0% | |
GATATGTAGCTGCTCTTAAA+AGG | - | chr5.4:77732613-77732632 | MS.gene020954:intron | 35.0% | |
GCAAAAGTAAATGTACATGG+TGG | - | chr5.4:77736460-77736479 | MS.gene020954:intron | 35.0% | |
GCTAATGTAAGGGATTAATC+AGG | - | chr5.4:77734089-77734108 | MS.gene020954:CDS | 35.0% | |
GTCTATAAGGATGTAGGTAT+GGG | - | chr5.4:77733141-77733160 | MS.gene020954:intron | 35.0% | |
GTTTCTCCAAACCTAAGTTT+GGG | - | chr5.4:77736282-77736301 | MS.gene020954:intron | 35.0% | |
TATTGCTAGATTGCTTGAGA+TGG | + | chr5.4:77735846-77735865 | None:intergenic | 35.0% | |
TCATTCTTGTGTGCATATGA+TGG | - | chr5.4:77733480-77733499 | MS.gene020954:intron | 35.0% | |
TCATTTGATGTGATCTGTAC+AGG | - | chr5.4:77735141-77735160 | MS.gene020954:intron | 35.0% | |
TCCTTGTCAACAATTGTTGA+TGG | + | chr5.4:77733410-77733429 | None:intergenic | 35.0% | |
TCTGCTTCTCTGTTTGTATT+TGG | - | chr5.4:77734420-77734439 | MS.gene020954:intron | 35.0% | |
TCTTAAAACCTTTGTATGGC+AGG | + | chr5.4:77736098-77736117 | None:intergenic | 35.0% | |
TGAGAGTTGAGTGATTTAGT+GGG | - | chr5.4:77734522-77734541 | MS.gene020954:intron | 35.0% | |
TGTCTATAAGGATGTAGGTA+TGG | - | chr5.4:77733140-77733159 | MS.gene020954:intron | 35.0% | |
TGTTATCCAAAAAAGAGGAG+GGG | + | chr5.4:77735620-77735639 | None:intergenic | 35.0% | |
TGTTTCTCCAAACCTAAGTT+TGG | - | chr5.4:77736281-77736300 | MS.gene020954:intron | 35.0% | |
TTGAGAGTTGAGTGATTTAG+TGG | - | chr5.4:77734521-77734540 | MS.gene020954:intron | 35.0% | |
TTGCGTAATAACTACATGGA+TGG | - | chr5.4:77734565-77734584 | MS.gene020954:intron | 35.0% | |
TTTCTCCAAACCTAAGTTTG+GGG | - | chr5.4:77736283-77736302 | MS.gene020954:intron | 35.0% | |
! | AAAAATGGAAAGTACGGTGT+AGG | - | chr5.4:77737010-77737029 | MS.gene020954:intron | 35.0% |
! | AAACAATATGAAGGGAGTGT+TGG | + | chr5.4:77735890-77735909 | None:intergenic | 35.0% |
! | AAGAGAAGACCAGGTATTTT+GGG | - | chr5.4:77733203-77733222 | MS.gene020954:intron | 35.0% |
! | AGATTGTCACTCATAATGGA+AGG | + | chr5.4:77735810-77735829 | None:intergenic | 35.0% |
! | CCTCTTGTTATCCAAAAAAG+AGG | + | chr5.4:77735625-77735644 | None:intergenic | 35.0% |
! | CTTGTTATCCAAAAAAGAGG+AGG | + | chr5.4:77735622-77735641 | None:intergenic | 35.0% |
! | GAAACTTCTTGGACTAGATT+CGG | - | chr5.4:77735375-77735394 | MS.gene020954:intron | 35.0% |
! | GATGTTGAAAGATGGTTTGT+GGG | - | chr5.4:77733116-77733135 | MS.gene020954:intron | 35.0% |
! | TAAAAATTGGCTCATGATCG+TGG | + | chr5.4:77735967-77735986 | None:intergenic | 35.0% |
! | TAGATTGCTTGAGATGGATT+GGG | + | chr5.4:77735840-77735859 | None:intergenic | 35.0% |
! | TGGTCTTGAACATTATTCAC+TGG | - | chr5.4:77734476-77734495 | MS.gene020954:intron | 35.0% |
!! | AAAGTTTGGTAATGACCTCT+AGG | + | chr5.4:77732033-77732052 | None:intergenic | 35.0% |
!!! | CCTCTTTTTTGGATAACAAG+AGG | - | chr5.4:77735622-77735641 | MS.gene020954:intron | 35.0% |
!!! | TTTTGATGGCCCTTATTTTG+AGG | + | chr5.4:77733760-77733779 | None:intergenic | 35.0% |
AAACCTTTGTATGGCAGGAT+CGG | + | chr5.4:77736093-77736112 | None:intergenic | 40.0% | |
AACAATTGTTGACAAGGACG+AGG | - | chr5.4:77733412-77733431 | MS.gene020954:intron | 40.0% | |
ACAATTGTTGACAAGGACGA+GGG | - | chr5.4:77733413-77733432 | MS.gene020954:intron | 40.0% | |
ACGTCCTTAGTGCTAATTTG+GGG | - | chr5.4:77732679-77732698 | MS.gene020954:intron | 40.0% | |
AGAAGCAGAGAAAGACACAT+AGG | + | chr5.4:77734409-77734428 | None:intergenic | 40.0% | |
AGGCAAGCACAACAAAAGTT+TGG | + | chr5.4:77732047-77732066 | None:intergenic | 40.0% | |
ATAAATGACGTTGTTGTGGC+CGG | - | chr5.4:77732926-77732945 | MS.gene020954:intron | 40.0% | |
ATTAATGAAGCCTTTGCGGT+AGG | - | chr5.4:77735256-77735275 | MS.gene020954:intron | 40.0% | |
CAATGTTGATCCAGCAATTG+TGG | - | chr5.4:77732638-77732657 | MS.gene020954:intron | 40.0% | |
CACAATTGCTGGATCAACAT+TGG | + | chr5.4:77732640-77732659 | None:intergenic | 40.0% | |
CAGGTCATTGCAAAAATCAC+TGG | - | chr5.4:77735005-77735024 | MS.gene020954:intron | 40.0% | |
CATCAAACTGGGATATCGAA+AGG | + | chr5.4:77734266-77734285 | None:intergenic | 40.0% | |
CGCCCAAATAACTTGAAACA+TGG | - | chr5.4:77733451-77733470 | MS.gene020954:intron | 40.0% | |
CTAGATTGCTTGAGATGGAT+TGG | + | chr5.4:77735841-77735860 | None:intergenic | 40.0% | |
GAACGTCCTTAGTGCTAATT+TGG | - | chr5.4:77732677-77732696 | MS.gene020954:intron | 40.0% | |
GACACGATTCACTAGTTGAT+GGG | - | chr5.4:77733094-77733113 | MS.gene020954:intron | 40.0% | |
GAGAGTTGAGTGATTTAGTG+GGG | - | chr5.4:77734523-77734542 | MS.gene020954:intron | 40.0% | |
GCAACTTTCACATGATGACA+AGG | + | chr5.4:77735412-77735431 | None:intergenic | 40.0% | |
GCTAACACTTTCAAGAAGCA+CGG | - | chr5.4:77734699-77734718 | MS.gene020954:intron | 40.0% | |
GGAGCTGTTGTAAATAACTC+TGG | + | chr5.4:77735169-77735188 | None:intergenic | 40.0% | |
GGATGTTGAAAGATGGTTTG+TGG | - | chr5.4:77733115-77733134 | MS.gene020954:intron | 40.0% | |
GGATTAATCAGGACTAGGAT+TGG | - | chr5.4:77734100-77734119 | MS.gene020954:CDS | 40.0% | |
GTAAGGGATTAATCAGGACT+AGG | - | chr5.4:77734095-77734114 | MS.gene020954:CDS | 40.0% | |
GTCCACATTTACCTTCATTG+CGG | - | chr5.4:77735547-77735566 | MS.gene020954:intron | 40.0% | |
GTTAACAAAGTTTGTGCGTC+AGG | - | chr5.4:77732765-77732784 | MS.gene020954:intron | 40.0% | |
GTTATCCAAAAAAGAGGAGG+GGG | + | chr5.4:77735619-77735638 | None:intergenic | 40.0% | |
TAACTTGGCAGCATCAAACT+GGG | + | chr5.4:77734277-77734296 | None:intergenic | 40.0% | |
TGAAGATTGCATGCTGTTGT+AGG | - | chr5.4:77735477-77735496 | MS.gene020954:intron | 40.0% | |
TGGGATGTCTATAAGGATGT+AGG | - | chr5.4:77733135-77733154 | MS.gene020954:intron | 40.0% | |
TTATCCAAAAAAGAGGAGGG+GGG | + | chr5.4:77735618-77735637 | None:intergenic | 40.0% | |
TTCGATAACAAGAGAAGACC+AGG | - | chr5.4:77733194-77733213 | MS.gene020954:intron | 40.0% | |
! | AGACATGTTTTCCATACCAC+CGG | + | chr5.4:77732948-77732967 | None:intergenic | 40.0% |
! | CAAGAGAAGACCAGGTATTT+TGG | - | chr5.4:77733202-77733221 | MS.gene020954:intron | 40.0% |
! | CGTATCCTGGTAACACTTTT+GGG | - | chr5.4:77736523-77736542 | MS.gene020954:intron | 40.0% |
! | CTAACACTTTCAAGAAGCAC+GGG | - | chr5.4:77734700-77734719 | MS.gene020954:intron | 40.0% |
! | GCTGCGCAAAGTATTCAATT+GGG | - | chr5.4:77732902-77732921 | MS.gene020954:intron | 40.0% |
! | GGTCTTCTCTTGTTATCGAA+TGG | + | chr5.4:77733194-77733213 | None:intergenic | 40.0% |
! | GTATCCTGGTAACACTTTTG+GGG | - | chr5.4:77736524-77736543 | MS.gene020954:intron | 40.0% |
! | GTTGATGGGATGTTGAAAGA+TGG | - | chr5.4:77733108-77733127 | MS.gene020954:intron | 40.0% |
! | TATCCTGGTAACACTTTTGG+GGG | - | chr5.4:77736525-77736544 | MS.gene020954:intron | 40.0% |
! | TCGTATCCTGGTAACACTTT+TGG | - | chr5.4:77736522-77736541 | MS.gene020954:intron | 40.0% |
! | TGCTGCGCAAAGTATTCAAT+TGG | - | chr5.4:77732901-77732920 | MS.gene020954:intron | 40.0% |
! | TGGTTTGTGGGATGTCTATA+AGG | - | chr5.4:77733128-77733147 | MS.gene020954:intron | 40.0% |
!! | CAGGTACTGAAGCAGAAAAA+TGG | - | chr5.4:77736995-77737014 | MS.gene020954:intron | 40.0% |
AAACAAGTCTGCTGATGCCT+TGG | + | chr5.4:77735786-77735805 | None:intergenic | 45.0% | |
AATAGCTATCGAGCCTAGCT+TGG | + | chr5.4:77732511-77732530 | None:intergenic | 45.0% | |
ACCCAAAGTAACCACTCTCT+TGG | + | chr5.4:77733346-77733365 | None:intergenic | 45.0% | |
ACCTTCATTGCGGTCCTTAA+TGG | - | chr5.4:77735557-77735576 | MS.gene020954:intron | 45.0% | |
AGCCTGTAGTGCTTACATAG+GGG | + | chr5.4:77736013-77736032 | None:intergenic | 45.0% | |
ATATTGACCTTGCTTCTGCC+AGG | + | chr5.4:77732985-77733004 | None:intergenic | 45.0% | |
ATCGCATCCCATATTTGCCA+AGG | - | chr5.4:77735766-77735785 | MS.gene020954:intron | 45.0% | |
ATGACCTCTAGGCTGTATAG+AGG | + | chr5.4:77732022-77732041 | None:intergenic | 45.0% | |
ATTAGGAACCACGAGTTACG+AGG | - | chr5.4:77736223-77736242 | MS.gene020954:intron | 45.0% | |
CAAACTTCGACCAAGCTTCA+AGG | - | chr5.4:77734299-77734318 | MS.gene020954:intron | 45.0% | |
CAACTAGTGAATCGTGTCCA+AGG | + | chr5.4:77733092-77733111 | None:intergenic | 45.0% | |
CAGCTTAGCACAGAGCAATT+AGG | + | chr5.4:77733825-77733844 | None:intergenic | 45.0% | |
CCAAAGCTATTGCCAATGCA+GGG | - | chr5.4:77735203-77735222 | MS.gene020954:intron | 45.0% | |
CCCAAAGTAACCACTCTCTT+GGG | + | chr5.4:77733345-77733364 | None:intergenic | 45.0% | |
CTAGGCTCGATAGCTATTGA+AGG | - | chr5.4:77732513-77732532 | MS.gene020954:intron | 45.0% | |
CTTGCCCCAAATTAGCACTA+AGG | + | chr5.4:77732686-77732705 | None:intergenic | 45.0% | |
GACCGCAATGAAGGTAAATG+TGG | + | chr5.4:77735552-77735571 | None:intergenic | 45.0% | |
GAGCCTGTAGTGCTTACATA+GGG | + | chr5.4:77736014-77736033 | None:intergenic | 45.0% | |
GCCATTAATTCCTACCGCAA+AGG | + | chr5.4:77735269-77735288 | None:intergenic | 45.0% | |
GCCTTTGCGGTAGGAATTAA+TGG | - | chr5.4:77735265-77735284 | MS.gene020954:intron | 45.0% | |
GCTGATGCCTTGGCAAATAT+GGG | + | chr5.4:77735776-77735795 | None:intergenic | 45.0% | |
GGACACGATTCACTAGTTGA+TGG | - | chr5.4:77733093-77733112 | MS.gene020954:intron | 45.0% | |
GGGCATAAATGACGTTGTTG+TGG | - | chr5.4:77732922-77732941 | MS.gene020954:intron | 45.0% | |
GTAACTTGGCAGCATCAAAC+TGG | + | chr5.4:77734278-77734297 | None:intergenic | 45.0% | |
GTCTAGTGTACCTAAGTACC+TGG | - | chr5.4:77732964-77732983 | MS.gene020954:intron | 45.0% | |
GTTTGTGCGTCAGGAATGAA+AGG | - | chr5.4:77732774-77732793 | MS.gene020954:intron | 45.0% | |
TATCCAAAAAAGAGGAGGGG+GGG | + | chr5.4:77735617-77735636 | None:intergenic | 45.0% | |
TCATGATGAGGAGTGGTCAA+TGG | + | chr5.4:77736254-77736273 | None:intergenic | 45.0% | |
TGATTTCTGTCTGTAGGTCG+TGG | - | chr5.4:77735339-77735358 | MS.gene020954:intron | 45.0% | |
TGCACAGATGTTTGCATCGT+TGG | - | chr5.4:77732429-77732448 | MS.gene020954:intron | 45.0% | |
TGCTGATGCCTTGGCAAATA+TGG | + | chr5.4:77735777-77735796 | None:intergenic | 45.0% | |
TGCTTACATAGGGGAGCTTT+GGG | + | chr5.4:77736004-77736023 | None:intergenic | 45.0% | |
TGGTCGAAGTTTGCGTAACT+TGG | + | chr5.4:77734292-77734311 | None:intergenic | 45.0% | |
TTATAGGAGCGACTACTCCT+AGG | + | chr5.4:77735685-77735704 | None:intergenic | 45.0% | |
TTGGCAAATATGGGATGCGA+TGG | + | chr5.4:77735767-77735786 | None:intergenic | 45.0% | |
TTTGGGCGATTACCTTTCCT+AGG | + | chr5.4:77733439-77733458 | None:intergenic | 45.0% | |
! | AAGAGAGTGGTTACTTTGGG+TGG | - | chr5.4:77733345-77733364 | MS.gene020954:intron | 45.0% |
! | AATGGAAAGTACGGTGTAGG+TGG | - | chr5.4:77737013-77737032 | MS.gene020954:intron | 45.0% |
! | ACATGGTGGAGCTGTATCAT+TGG | - | chr5.4:77736474-77736493 | MS.gene020954:intron | 45.0% |
! | AGAGAGTGGTTACTTTGGGT+GGG | - | chr5.4:77733346-77733365 | MS.gene020954:intron | 45.0% |
! | CATGGTGGAGCTGTATCATT+GGG | - | chr5.4:77736475-77736494 | MS.gene020954:intron | 45.0% |
! | CCCAAGAGAGTGGTTACTTT+GGG | - | chr5.4:77733342-77733361 | MS.gene020954:intron | 45.0% |
! | CCTGCATTGGCAATAGCTTT+GGG | + | chr5.4:77735205-77735224 | None:intergenic | 45.0% |
! | CTGCATTGGCAATAGCTTTG+GGG | + | chr5.4:77735204-77735223 | None:intergenic | 45.0% |
! | GGATTTTGTTGCACTTACGC+AGG | + | chr5.4:77733725-77733744 | None:intergenic | 45.0% |
!! | AATAGCTTTGGGGATGGCAA+TGG | + | chr5.4:77735194-77735213 | None:intergenic | 45.0% |
!! | AGTTTTGGTGAGTGGAGAGA+AGG | - | chr5.4:77734965-77734984 | MS.gene020954:intron | 45.0% |
!! | ATACCCCCAAAAGTGTTACC+AGG | + | chr5.4:77736531-77736550 | None:intergenic | 45.0% |
!! | ATTGGCAATAGCTTTGGGGA+TGG | + | chr5.4:77735200-77735219 | None:intergenic | 45.0% |
!! | CAATATGAAGGGAGTGTTGG+AGG | + | chr5.4:77735887-77735906 | None:intergenic | 45.0% |
!! | GAGAGAAGGCATTGAAGCTT+GGG | - | chr5.4:77734979-77734998 | MS.gene020954:intron | 45.0% |
!!! | GCAGTTCAGAGTTTTGAACG+TGG | - | chr5.4:77733311-77733330 | MS.gene020954:intron | 45.0% |
!!! | GCTGCATTAGTTTTGGTGAG+TGG | - | chr5.4:77734957-77734976 | MS.gene020954:intron | 45.0% |
!!! | TGGTGCTGCTGCATTAGTTT+TGG | - | chr5.4:77734950-77734969 | MS.gene020954:intron | 45.0% |
!!! | TATAATTTATCAATAATTTT+GGG | - | chr5.4:77734005-77734024 | MS.gene020954:intron | 5.0% |
!!! | TTATAATTTATCAATAATTT+TGG | - | chr5.4:77734004-77734023 | MS.gene020954:intron | 5.0% |
ACACGTTCCACAGCACAGAA+AGG | + | chr5.4:77735513-77735532 | None:intergenic | 50.0% | |
ACGTTCCACAGCACAGAAAG+GGG | + | chr5.4:77735511-77735530 | None:intergenic | 50.0% | |
ATATGGGATGCGATGGAGGA+TGG | + | chr5.4:77735760-77735779 | None:intergenic | 50.0% | |
ATCACTCCGGTTGAAGTCTC+TGG | - | chr5.4:77733371-77733390 | MS.gene020954:intron | 50.0% | |
ATCCAAAAAAGAGGAGGGGG+GGG | + | chr5.4:77735616-77735635 | None:intergenic | 50.0% | |
CACGTTCCACAGCACAGAAA+GGG | + | chr5.4:77735512-77735531 | None:intergenic | 50.0% | |
CCCAAAGCTATTGCCAATGC+AGG | - | chr5.4:77735202-77735221 | MS.gene020954:intron | 50.0% | |
CTAAGTACCTGGCAGAAGCA+AGG | - | chr5.4:77732975-77732994 | MS.gene020954:intron | 50.0% | |
CTAGTGAATCGTGTCCAAGG+CGG | + | chr5.4:77733089-77733108 | None:intergenic | 50.0% | |
CTCCCCTATGTAAGCACTAC+AGG | - | chr5.4:77736008-77736027 | MS.gene020954:intron | 50.0% | |
CTTCCACCAGAGACTTCAAC+CGG | + | chr5.4:77733380-77733399 | None:intergenic | 50.0% | |
CTTGCTTCTGCCAGGTACTT+AGG | + | chr5.4:77732977-77732996 | None:intergenic | 50.0% | |
CTTTGGGTGGGAAATCACTC+CGG | - | chr5.4:77733358-77733377 | MS.gene020954:intron | 50.0% | |
GACTCCTCTATACAGCCTAG+AGG | - | chr5.4:77732015-77732034 | MS.gene020954:CDS | 50.0% | |
GCAAATATGGGATGCGATGG+AGG | + | chr5.4:77735764-77735783 | None:intergenic | 50.0% | |
GCCATTAAGGACCGCAATGA+AGG | + | chr5.4:77735561-77735580 | None:intergenic | 50.0% | |
GCCCAAGAGAGTGGTTACTT+TGG | - | chr5.4:77733341-77733360 | MS.gene020954:intron | 50.0% | |
GCTTACATAGGGGAGCTTTG+GGG | + | chr5.4:77736003-77736022 | None:intergenic | 50.0% | |
GCTTGCCCCAAACTTAGGTT+TGG | + | chr5.4:77736291-77736310 | None:intergenic | 50.0% | |
GGAATTTCTGCCCAAGAGAG+TGG | - | chr5.4:77733332-77733351 | MS.gene020954:intron | 50.0% | |
GGAGCCTGTAGTGCTTACAT+AGG | + | chr5.4:77736015-77736034 | None:intergenic | 50.0% | |
GGTGTAGGTGGTGTTTGCAA+CGG | - | chr5.4:77737025-77737044 | MS.gene020954:intron | 50.0% | |
GGTTGAAGTCTCTGGTGGAA+GGG | - | chr5.4:77733379-77733398 | MS.gene020954:intron | 50.0% | |
GTACCAAGAAACCCACCCAT+TGG | + | chr5.4:77732468-77732487 | None:intergenic | 50.0% | |
GTATCATTGGGCCATCCTCT+TGG | - | chr5.4:77736487-77736506 | MS.gene020954:intron | 50.0% | |
GTGCTTACATAGGGGAGCTT+TGG | + | chr5.4:77736005-77736024 | None:intergenic | 50.0% | |
GTTGAAGTCTCTGGTGGAAG+GGG | - | chr5.4:77733380-77733399 | MS.gene020954:intron | 50.0% | |
TAGTGAATCGTGTCCAAGGC+GGG | + | chr5.4:77733088-77733107 | None:intergenic | 50.0% | |
TCACAGGAGCTCCACAACAA+GGG | + | chr5.4:77737068-77737087 | None:intergenic | 50.0% | |
TCCATTCTCCATCGACACCT+CGG | - | chr5.4:77736058-77736077 | MS.gene020954:intron | 50.0% | |
TGGATATGCTGATGCTGCTC+AGG | - | chr5.4:77735025-77735044 | MS.gene020954:intron | 50.0% | |
TTGCACGTACACCAATGGGT+GGG | - | chr5.4:77732454-77732473 | MS.gene020954:intron | 50.0% | |
! | ACACCAATGGGTGGGTTTCT+TGG | - | chr5.4:77732462-77732481 | MS.gene020954:intron | 50.0% |
! | CAATGGCTTGCCCCAAACTT+AGG | + | chr5.4:77736296-77736315 | None:intergenic | 50.0% |
! | CCCTGCATTGGCAATAGCTT+TGG | + | chr5.4:77735206-77735225 | None:intergenic | 50.0% |
! | GGTGTTGCACGTACACCAAT+GGG | - | chr5.4:77732450-77732469 | MS.gene020954:intron | 50.0% |
!! | ACTTCACGTCGATTCACGTG+TGG | + | chr5.4:77735929-77735948 | None:intergenic | 50.0% |
!! | ATGAAGGGAGTGTTGGAGGA+TGG | + | chr5.4:77735883-77735902 | None:intergenic | 50.0% |
!! | CCTTATGCTGGAAGCATTGC+CGG | + | chr5.4:77734346-77734365 | None:intergenic | 50.0% |
!! | GGAGAGAAGGCATTGAAGCT+TGG | - | chr5.4:77734978-77734997 | MS.gene020954:intron | 50.0% |
!! | TGGTGTTGCACGTACACCAA+TGG | - | chr5.4:77732449-77732468 | MS.gene020954:intron | 50.0% |
AATGACGTTGTTGTGGCCGG+TGG | - | chr5.4:77732929-77732948 | MS.gene020954:intron | 55.0% | |
ACTCCGGTTGAAGTCTCTGG+TGG | - | chr5.4:77733374-77733393 | MS.gene020954:intron | 55.0% | |
ACTGGAGGCTCTGTTACTGC+CGG | - | chr5.4:77734324-77734343 | MS.gene020954:intron | 55.0% | |
AGACAAGCTGCTCTTGGAGC+AGG | - | chr5.4:77732714-77732733 | MS.gene020954:intron | 55.0% | |
AGCTATCGAGCCTAGCTTGG+TGG | + | chr5.4:77732508-77732527 | None:intergenic | 55.0% | |
AGCTATTGCCAATGCAGGGC+TGG | - | chr5.4:77735207-77735226 | MS.gene020954:intron | 55.0% | |
CACAGCACAGAAAGGGGTAG+GGG | + | chr5.4:77735505-77735524 | None:intergenic | 55.0% | |
CACCACTGCAACCAAGAGGA+TGG | + | chr5.4:77736501-77736520 | None:intergenic | 55.0% | |
CCAAGAGCAGCTTGTCTAGC+AGG | + | chr5.4:77732711-77732730 | None:intergenic | 55.0% | |
CCAAGCTTCAAGGAGACTGG+AGG | - | chr5.4:77734309-77734328 | MS.gene020954:intron | 55.0% | |
CCACAGCACAGAAAGGGGTA+GGG | + | chr5.4:77735506-77735525 | None:intergenic | 55.0% | |
CCACCGATCCTGCCATACAA+AGG | - | chr5.4:77736087-77736106 | MS.gene020954:CDS | 55.0% | |
CCGGCAATGCTTCCAGCATA+AGG | - | chr5.4:77734343-77734362 | MS.gene020954:intron | 55.0% | |
CCTCCAGTCTCCTTGAAGCT+TGG | + | chr5.4:77734312-77734331 | None:intergenic | 55.0% | |
CCTGCTAGACAAGCTGCTCT+TGG | - | chr5.4:77732708-77732727 | MS.gene020954:intron | 55.0% | |
CCTTTGTATGGCAGGATCGG+TGG | + | chr5.4:77736090-77736109 | None:intergenic | 55.0% | |
CGACCAAGCTTCAAGGAGAC+TGG | - | chr5.4:77734306-77734325 | MS.gene020954:intron | 55.0% | |
CGGTTGAAGTCTCTGGTGGA+AGG | - | chr5.4:77733378-77733397 | MS.gene020954:intron | 55.0% | |
GAGGAGTCTGAAGATGCTGC+CGG | + | chr5.4:77732003-77732022 | None:intergenic | 55.0% | |
GTAGGTGGTGTTTGCAACGG+AGG | - | chr5.4:77737028-77737047 | MS.gene020954:intron | 55.0% | |
GTTGCACGTACACCAATGGG+TGG | - | chr5.4:77732453-77732472 | MS.gene020954:intron | 55.0% | |
TCCAAAAAAGAGGAGGGGGG+GGG | + | chr5.4:77735615-77735634 | None:intergenic | 55.0% | |
TCCACAGCACAGAAAGGGGT+AGG | + | chr5.4:77735507-77735526 | None:intergenic | 55.0% | |
TCTGTACCTGCCACCAAGCT+AGG | - | chr5.4:77732495-77732514 | MS.gene020954:intron | 55.0% | |
TGAAGTCTCCAGCCCTGCAT+TGG | + | chr5.4:77735218-77735237 | None:intergenic | 55.0% | |
TGGCAATGCCTCGTAACTCG+TGG | + | chr5.4:77736234-77736253 | None:intergenic | 55.0% | |
TGGTGCATCTGCCCTTGTTG+TGG | - | chr5.4:77737054-77737073 | MS.gene020954:CDS | 55.0% | |
TTCAGGAAAGGATCCCGCCT+TGG | - | chr5.4:77733072-77733091 | MS.gene020954:intron | 55.0% | |
TTGCAGTGGTGCTCGTATCC+TGG | - | chr5.4:77736510-77736529 | MS.gene020954:intron | 55.0% | |
! | AGGATCGGTGGACTTATCCG+AGG | + | chr5.4:77736078-77736097 | None:intergenic | 55.0% |
! | GGCATTGAAGCTTGGGCTTC+AGG | - | chr5.4:77734986-77735005 | MS.gene020954:intron | 55.0% |
!! | GGACTTATCCGAGGTGTCGA+TGG | + | chr5.4:77736069-77736088 | None:intergenic | 55.0% |
!! | TCACGTCGATTCACGTGTGG+TGG | + | chr5.4:77735926-77735945 | None:intergenic | 55.0% |
!! | TCCGAGGTGTCGATGGAGAA+TGG | + | chr5.4:77736062-77736081 | None:intergenic | 55.0% |
AAAAAAGAGGAGGGGGGGGG+GGG | + | chr5.4:77735612-77735631 | None:intergenic | 60.0% | |
CAAAAAAGAGGAGGGGGGGG+GGG | + | chr5.4:77735613-77735632 | None:intergenic | 60.0% | |
CAAGGACGAGGGCCTAGGAA+AGG | - | chr5.4:77733424-77733443 | MS.gene020954:intron | 60.0% | |
CCAAAAAAGAGGAGGGGGGG+GGG | + | chr5.4:77735614-77735633 | None:intergenic | 60.0% | |
CCCTACCCCTTTCTGTGCTG+TGG | - | chr5.4:77735503-77735522 | MS.gene020954:intron | 60.0% | |
CGAGCACCACTGCAACCAAG+AGG | + | chr5.4:77736505-77736524 | None:intergenic | 60.0% | |
CGTTGTTGTGGCCGGTGGTA+TGG | - | chr5.4:77732934-77732953 | MS.gene020954:intron | 60.0% | |
GGCCATCCTCTTGGTTGCAG+TGG | - | chr5.4:77736496-77736515 | MS.gene020954:intron | 60.0% | |
GGTGGTGTTTGCAACGGAGG+AGG | - | chr5.4:77737031-77737050 | MS.gene020954:intron | 60.0% | |
GGTGTTTGCAACGGAGGAGG+TGG | - | chr5.4:77737034-77737053 | MS.gene020954:intron | 60.0% | |
GTTGACAAGGACGAGGGCCT+AGG | - | chr5.4:77733419-77733438 | MS.gene020954:intron | 60.0% | |
TGGGATGCGATGGAGGATGG+CGG | + | chr5.4:77735757-77735776 | None:intergenic | 60.0% | |
! | ATCGAGCCTAGCTTGGTGGC+AGG | + | chr5.4:77732504-77732523 | None:intergenic | 60.0% |
!! | GCTTTGGGGATGGCAATGGC+TGG | + | chr5.4:77735190-77735209 | None:intergenic | 60.0% |
AAAAAGAGGAGGGGGGGGGG+GGG | + | chr5.4:77735611-77735630 | None:intergenic | 65.0% | |
! | GATGCGATGGAGGATGGCGG+AGG | + | chr5.4:77735754-77735773 | None:intergenic | 65.0% |
!!! | CCCCCCCCCCTCCTCTTTTT+TGG | - | chr5.4:77735611-77735630 | MS.gene020954:intron | 65.0% |
AAAAGAGGAGGGGGGGGGGG+GGG | + | chr5.4:77735610-77735629 | None:intergenic | 70.0% | |
AAAGAGGAGGGGGGGGGGGG+GGG | + | chr5.4:77735609-77735628 | None:intergenic | 75.0% | |
! | AAGAGGAGGGGGGGGGGGGG+GGG | + | chr5.4:77735608-77735627 | None:intergenic | 80.0% |
! | AGAGGAGGGGGGGGGGGGGG+GGG | + | chr5.4:77735607-77735626 | None:intergenic | 85.0% |
! | AGGAGGGGGGGGGGGGGGGG+GGG | + | chr5.4:77735605-77735624 | None:intergenic | 90.0% |
! | GAGGAGGGGGGGGGGGGGGG+GGG | + | chr5.4:77735606-77735625 | None:intergenic | 90.0% |
! | AGGGGGGGGGGGGGGGGGGG+GGG | + | chr5.4:77735602-77735621 | None:intergenic | 95.0% |
! | GAGGGGGGGGGGGGGGGGGG+GGG | + | chr5.4:77735603-77735622 | None:intergenic | 95.0% |
! | GGAGGGGGGGGGGGGGGGGG+GGG | + | chr5.4:77735604-77735623 | None:intergenic | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 77731994 | 77737087 | 77731994 | ID=MS.gene020954 |
chr5.4 | mRNA | 77731994 | 77737087 | 77731994 | ID=MS.gene020954.t1;Parent=MS.gene020954 |
chr5.4 | exon | 77737045 | 77737087 | 77737045 | ID=MS.gene020954.t1.exon1;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77737045 | 77737087 | 77737045 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
chr5.4 | exon | 77736547 | 77736645 | 77736547 | ID=MS.gene020954.t1.exon2;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77736547 | 77736645 | 77736547 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
chr5.4 | exon | 77736286 | 77736459 | 77736286 | ID=MS.gene020954.t1.exon3;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77736286 | 77736459 | 77736286 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
chr5.4 | exon | 77736085 | 77736190 | 77736085 | ID=MS.gene020954.t1.exon4;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77736085 | 77736190 | 77736085 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
chr5.4 | exon | 77735866 | 77736004 | 77735866 | ID=MS.gene020954.t1.exon5;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77735866 | 77736004 | 77735866 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
chr5.4 | exon | 77735636 | 77735779 | 77735636 | ID=MS.gene020954.t1.exon6;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77735636 | 77735779 | 77735636 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
chr5.4 | exon | 77734717 | 77734802 | 77734717 | ID=MS.gene020954.t1.exon7;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77734717 | 77734802 | 77734717 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
chr5.4 | exon | 77734035 | 77734134 | 77734035 | ID=MS.gene020954.t1.exon8;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77734035 | 77734134 | 77734035 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
chr5.4 | exon | 77733808 | 77733918 | 77733808 | ID=MS.gene020954.t1.exon9;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77733808 | 77733918 | 77733808 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
chr5.4 | exon | 77733685 | 77733726 | 77733685 | ID=MS.gene020954.t1.exon10;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77733685 | 77733726 | 77733685 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
chr5.4 | exon | 77732535 | 77732621 | 77732535 | ID=MS.gene020954.t1.exon11;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77732535 | 77732621 | 77732535 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
chr5.4 | exon | 77731994 | 77732083 | 77731994 | ID=MS.gene020954.t1.exon12;Parent=MS.gene020954.t1 |
chr5.4 | CDS | 77731994 | 77732083 | 77731994 | ID=cds.MS.gene020954.t1;Parent=MS.gene020954.t1 |
Gene Sequence |
Protein sequence |