Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38144.t1 | XP_003618039.1 | 98.5 | 407 | 6 | 0 | 1 | 407 | 1 | 407 | 1.90E-219 | 771.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38144.t1 | Q8S4Y1 | 84.1 | 402 | 64 | 0 | 6 | 407 | 2 | 403 | 2.1e-190 | 666.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38144.t1 | G7K0L3 | 98.5 | 407 | 6 | 0 | 1 | 407 | 1 | 407 | 1.4e-219 | 771.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38144 | MS.gene64334 | PPI |
| MS.gene38144 | MS.gene062501 | PPI |
| MS.gene38144 | MS.gene96906 | PPI |
| MS.gene38144 | MS.gene40160 | PPI |
| MS.gene38144 | MS.gene53674 | PPI |
| MS.gene38144 | MS.gene028573 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38144.t1 | MTR_5g098310 | 98.526 | 407 | 6 | 0 | 1 | 407 | 1 | 407 | 0.0 | 807 |
| MS.gene38144.t1 | MTR_0449s0040 | 97.994 | 349 | 7 | 0 | 1 | 349 | 1 | 349 | 0.0 | 695 |
| MS.gene38144.t1 | MTR_4g134090 | 80.353 | 397 | 78 | 0 | 11 | 407 | 2 | 398 | 0.0 | 667 |
| MS.gene38144.t1 | MTR_4g134090 | 80.867 | 392 | 75 | 0 | 16 | 407 | 14 | 405 | 0.0 | 661 |
| MS.gene38144.t1 | MTR_4g134090 | 78.884 | 251 | 53 | 0 | 11 | 261 | 2 | 252 | 3.91e-150 | 427 |
| MS.gene38144.t1 | MTR_4g022430 | 37.438 | 406 | 219 | 12 | 16 | 405 | 45 | 431 | 5.50e-64 | 211 |
| MS.gene38144.t1 | MTR_1g047210 | 34.568 | 405 | 232 | 9 | 16 | 405 | 52 | 438 | 1.43e-57 | 195 |
| MS.gene38144.t1 | MTR_0837s0020 | 41.176 | 119 | 66 | 3 | 24 | 139 | 808 | 925 | 5.02e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38144.t1 | AT5G47720 | 78.624 | 407 | 85 | 1 | 1 | 407 | 1 | 405 | 0.0 | 669 |
| MS.gene38144.t1 | AT5G47720 | 78.624 | 407 | 85 | 1 | 1 | 407 | 1 | 405 | 0.0 | 669 |
| MS.gene38144.t1 | AT5G47720 | 78.624 | 407 | 85 | 1 | 1 | 407 | 1 | 405 | 0.0 | 668 |
| MS.gene38144.t1 | AT5G47720 | 78.624 | 407 | 85 | 1 | 1 | 407 | 1 | 405 | 0.0 | 668 |
| MS.gene38144.t1 | AT5G48230 | 84.080 | 402 | 64 | 0 | 6 | 407 | 2 | 403 | 0.0 | 666 |
| MS.gene38144.t1 | AT5G48230 | 84.131 | 397 | 63 | 0 | 11 | 407 | 2 | 398 | 0.0 | 657 |
| MS.gene38144.t1 | AT5G47720 | 79.337 | 392 | 81 | 0 | 16 | 407 | 21 | 412 | 0.0 | 653 |
| MS.gene38144.t1 | AT1G04710 | 34.889 | 407 | 228 | 9 | 16 | 405 | 43 | 429 | 2.55e-62 | 207 |
| MS.gene38144.t1 | AT2G33150 | 34.699 | 415 | 242 | 8 | 4 | 405 | 39 | 437 | 1.79e-60 | 203 |
| MS.gene38144.t1 | AT5G48880 | 36.855 | 407 | 222 | 12 | 16 | 405 | 7 | 395 | 4.10e-59 | 198 |
| MS.gene38144.t1 | AT5G48880 | 36.493 | 422 | 227 | 13 | 1 | 405 | 41 | 438 | 8.89e-59 | 198 |
| MS.gene38144.t1 | AT5G48880 | 36.493 | 422 | 227 | 13 | 1 | 405 | 41 | 438 | 8.89e-59 | 198 |
| MS.gene38144.t1 | AT5G48880 | 36.493 | 422 | 227 | 13 | 1 | 405 | 41 | 438 | 8.89e-59 | 198 |
Find 121 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATGTCCTCAGTGCTAATT+TGG | 0.179974 | 5.3:-79599291 | MS.gene38144:CDS |
| CTTGCTTCTGCCAGGTATTT+AGG | 0.204733 | 5.3:+79598988 | None:intergenic |
| GATATGTAGCTGCTCTTAAA+AGG | 0.206767 | 5.3:-79599355 | MS.gene38144:intron |
| GGCATTGAAGCTTGGGCTTC+AGG | 0.214435 | 5.3:-79596568 | MS.gene38144:CDS |
| TCGTATCCTGGTCACACTTT+TGG | 0.232278 | 5.3:-79595751 | MS.gene38144:CDS |
| GGAATTTCTGCCCAAGAAAA+TGG | 0.259249 | 5.3:-79598630 | MS.gene38144:CDS |
| CTTGCAAATCAGAAACTTCT+TGG | 0.274997 | 5.3:-79596182 | MS.gene38144:CDS |
| ATTGTGGAAGAAGTATTCTT+TGG | 0.277800 | 5.3:-79599314 | MS.gene38144:CDS |
| AATACTTCTTCCACAATTGA+TGG | 0.293513 | 5.3:+79599320 | None:intergenic |
| TACCTGGTCTTCTCTTGTTA+TGG | 0.305482 | 5.3:+79598765 | None:intergenic |
| CCCTGCATTGGCAATAGCTT+TGG | 0.307812 | 5.3:+79596343 | None:intergenic |
| ACACCAATGGGTGGATTTCT+TGG | 0.312484 | 5.3:-79599506 | MS.gene38144:CDS |
| CCTGCATTGGCAATAGCTTT+GGG | 0.331347 | 5.3:+79596344 | None:intergenic |
| TGCTGCACAGAGTATTCAAT+TGG | 0.348532 | 5.3:-79599061 | MS.gene38144:CDS |
| GTTAACAAAGTTTGCGCATC+AGG | 0.354781 | 5.3:-79599203 | MS.gene38144:CDS |
| GCCCAAGAAAATGGTTACTT+TGG | 0.364539 | 5.3:-79598621 | MS.gene38144:CDS |
| TCCTTGTCAACAATTGTTGA+TGG | 0.368042 | 5.3:+79598555 | None:intergenic |
| TGCACAGATGTTTGCGTCGT+TGG | 0.379728 | 5.3:-79599539 | MS.gene38144:intron |
| TGGTGCTGCTGCATTAGTTT+TGG | 0.381346 | 5.3:-79596604 | MS.gene38144:CDS |
| AATGTCCTCAGTGCTAATTT+GGG | 0.388463 | 5.3:-79599290 | MS.gene38144:CDS |
| CCAAGAGCAGCTTGTCTAGC+AGG | 0.397023 | 5.3:+79599260 | None:intergenic |
| TTGTGGAAGAAGTATTCTTT+GGG | 0.400326 | 5.3:-79599313 | MS.gene38144:CDS |
| GAGAGAAGGCATTGAAGCTT+GGG | 0.409803 | 5.3:-79596575 | MS.gene38144:CDS |
| TGGTTTGTGGGATGTCTATA+AGG | 0.412478 | 5.3:-79598833 | MS.gene38144:CDS |
| CAAACTTCGACCTAGTTTCA+AGG | 0.416429 | 5.3:-79598063 | MS.gene38144:CDS |
| TGTTGTTGTGGCTGGTGGTA+TGG | 0.422207 | 5.3:-79599028 | MS.gene38144:CDS |
| CCCAAGAAAATGGTTACTTT+GGG | 0.423179 | 5.3:-79598620 | MS.gene38144:CDS |
| CCTGCTAGACAAGCTGCTCT+TGG | 0.430204 | 5.3:-79599260 | MS.gene38144:CDS |
| GTATCATTGGGTCATCCTCT+TGG | 0.432022 | 5.3:-79595786 | MS.gene38144:CDS |
| TGAAATTAATGAAGCCTTTG+CGG | 0.433981 | 5.3:-79596294 | MS.gene38144:intron |
| TCTGTACCTGCCACCAAGTT+AGG | 0.434249 | 5.3:-79599473 | MS.gene38144:CDS |
| GGACACGATTCACTTGTTGA+TGG | 0.435861 | 5.3:-79598868 | MS.gene38144:CDS |
| GAAACTTCTTGGACTAGATT+CGG | 0.439347 | 5.3:-79596171 | MS.gene38144:intron |
| GGAGCTGTTGTAAATAACTC+TGG | 0.441062 | 5.3:+79596380 | None:intergenic |
| GGTCTTCTCTTGTTATGGAA+TGG | 0.444743 | 5.3:+79598770 | None:intergenic |
| CCCAAAGCTATTGCCAATGC+AGG | 0.447933 | 5.3:-79596344 | MS.gene38144:CDS |
| TGGATATGCTGATGCTGCTC+AGG | 0.450989 | 5.3:-79596529 | MS.gene38144:intron |
| ATCACTCCGGTTGAAGTGTC+TGG | 0.453656 | 5.3:-79598591 | MS.gene38144:CDS |
| AGGTCGAAGTTTGCGTAACT+TGG | 0.457362 | 5.3:+79598073 | None:intergenic |
| AATAGCTATCGAGCCTAACT+TGG | 0.459830 | 5.3:+79599460 | None:intergenic |
| GGAGAGAAGGCATTGAAGCT+TGG | 0.472796 | 5.3:-79596576 | MS.gene38144:CDS |
| AAGAAAATGGTTACTTTGGG+TGG | 0.473564 | 5.3:-79598617 | MS.gene38144:CDS |
| CCTCCAGTCTCCTTGAAACT+AGG | 0.482194 | 5.3:+79598053 | None:intergenic |
| ATATTGACCTTGCTTCTGCC+AGG | 0.483025 | 5.3:+79598980 | None:intergenic |
| CGACCTAGTTTCAAGGAGAC+TGG | 0.485581 | 5.3:-79598056 | MS.gene38144:CDS |
| TTTGGGTGATTACCTTTCCT+AGG | 0.486025 | 5.3:+79598526 | None:intergenic |
| GTTGACAAGGACGAGGGCCT+AGG | 0.486835 | 5.3:-79598543 | MS.gene38144:CDS |
| GACACGATTCACTTGTTGAT+GGG | 0.491638 | 5.3:-79598867 | MS.gene38144:CDS |
| TTGCAGTGGTGCTCGTATCC+TGG | 0.491657 | 5.3:-79595763 | MS.gene38144:CDS |
| CTGGCAATGCTTCTAGCATA+AGG | 0.492119 | 5.3:-79598019 | MS.gene38144:intron |
| TGTCTATAAGGATGTCGGTA+TGG | 0.492288 | 5.3:-79598821 | MS.gene38144:CDS |
| CTTCCACCAGACACTTCAAC+CGG | 0.493952 | 5.3:+79598585 | None:intergenic |
| TGAAGGCTCCAACCCTGCAT+TGG | 0.501131 | 5.3:+79596331 | None:intergenic |
| GTCTATAAGGATGTCGGTAT+GGG | 0.501674 | 5.3:-79598820 | MS.gene38144:CDS |
| AGACAAGCTGCTCTTGGAGC+AGG | 0.505123 | 5.3:-79599254 | MS.gene38144:CDS |
| ATAAATGATGTTGTTGTGGC+TGG | 0.505364 | 5.3:-79599036 | MS.gene38144:CDS |
| CGGTTGAAGTGTCTGGTGGA+AGG | 0.507574 | 5.3:-79598584 | MS.gene38144:CDS |
| AAGTGAATCGTGTCCAAGGC+GGG | 0.510201 | 5.3:+79598876 | None:intergenic |
| GGTGTTTGCAACGGAGGAGG+TGG | 0.510695 | 5.3:-79595240 | MS.gene38144:CDS |
| GCTTTGGGGATGGCAATGGC+TGG | 0.511880 | 5.3:+79596359 | None:intergenic |
| TGGTGTTGCACGTACACCAA+TGG | 0.516183 | 5.3:-79599519 | MS.gene38144:CDS |
| GAATCTGAAGATGCTGCTGT+TGG | 0.520420 | 5.3:+79600399 | None:intergenic |
| GGTTGAAGTGTCTGGTGGAA+GGG | 0.523151 | 5.3:-79598583 | MS.gene38144:CDS |
| TTTAGGAAAGGATCCCGCCT+TGG | 0.527599 | 5.3:-79598889 | MS.gene38144:intron |
| TGGTGCATCTGCCCTTGTTG+TGG | 0.528344 | 5.3:-79595220 | MS.gene38144:CDS |
| GGTGGTGTTTGCAACGGAGG+AGG | 0.528856 | 5.3:-79595243 | MS.gene38144:CDS |
| GATGTTGAAAGATGGTTTGT+GGG | 0.529197 | 5.3:-79598845 | MS.gene38144:CDS |
| GGATGTTGAAAGATGGTTTG+TGG | 0.529632 | 5.3:-79598846 | MS.gene38144:CDS |
| ACATGGTGGAGCTGTATCAT+TGG | 0.532197 | 5.3:-79595799 | MS.gene38144:CDS |
| AGCTATTGCCAATGCAGGGT+TGG | 0.532781 | 5.3:-79596339 | MS.gene38144:CDS |
| ATATGTAGCTGCTCTTAAAA+GGG | 0.534405 | 5.3:-79599354 | MS.gene38144:intron |
| ATGACCTCTAGGCTGTATAG+AGG | 0.539591 | 5.3:+79600377 | None:intergenic |
| AACGGAAAGTACGGTGTTGG+TGG | 0.540309 | 5.3:-79595261 | MS.gene38144:CDS |
| GTTGAAGTGTCTGGTGGAAG+GGG | 0.540458 | 5.3:-79598582 | MS.gene38144:CDS |
| TTAGGCTCGATAGCTATTGA+AGG | 0.541420 | 5.3:-79599455 | MS.gene38144:intron |
| GTTGATGGGATGTTGAAAGA+TGG | 0.545678 | 5.3:-79598853 | MS.gene38144:CDS |
| CAGGGAAAAGTAAATGTACA+TGG | 0.548382 | 5.3:-79595816 | MS.gene38144:CDS |
| ACTGGAGGTTCTGTTACTGC+TGG | 0.550399 | 5.3:-79598038 | MS.gene38144:CDS |
| CTTTGGGTGGGAAATCACTC+CGG | 0.551515 | 5.3:-79598604 | MS.gene38144:CDS |
| ATCGAGCCTAACTTGGTGGC+AGG | 0.551569 | 5.3:+79599467 | None:intergenic |
| GGTGTTGCACGTACACCAAT+GGG | 0.554411 | 5.3:-79599518 | MS.gene38144:CDS |
| CAACAAGTGAATCGTGTCCA+AGG | 0.560168 | 5.3:+79598872 | None:intergenic |
| GTTGGTGGTGTTTGCAACGG+AGG | 0.561559 | 5.3:-79595246 | MS.gene38144:CDS |
| AATAGCTTTGGGGATGGCAA+TGG | 0.565250 | 5.3:+79596355 | None:intergenic |
| AGAAAATGGTTACTTTGGGT+GGG | 0.567113 | 5.3:-79598616 | MS.gene38144:CDS |
| TGCCAGGTATTTAGGTACGC+TGG | 0.572448 | 5.3:+79598996 | None:intergenic |
| GCTGCACAGAGTATTCAATT+GGG | 0.574260 | 5.3:-79599060 | MS.gene38144:CDS |
| GAGCTGTTGTAAATAACTCT+GGG | 0.576934 | 5.3:+79596381 | None:intergenic |
| GTTAACAGTAGTGCAGACTA+CGG | 0.578476 | 5.3:+79599220 | None:intergenic |
| GGTCATCCTCTTGGTTGCAG+TGG | 0.581408 | 5.3:-79595777 | MS.gene38144:CDS |
| GTCCAGCGTACCTAAATACC+TGG | 0.584552 | 5.3:-79598998 | MS.gene38144:CDS |
| GGGTATAAATGATGTTGTTG+TGG | 0.588250 | 5.3:-79599040 | MS.gene38144:CDS |
| AGCTATCGAGCCTAACTTGG+TGG | 0.592108 | 5.3:+79599463 | None:intergenic |
| CATGGTGGAGCTGTATCATT+GGG | 0.592568 | 5.3:-79595798 | MS.gene38144:CDS |
| CTGCATTGGCAATAGCTTTG+GGG | 0.592647 | 5.3:+79596345 | None:intergenic |
| TAATGTTGATCCATCAATTG+TGG | 0.592802 | 5.3:-79599330 | MS.gene38144:CDS |
| TTCACAGGAGCTCCACAACA+AGG | 0.592999 | 5.3:+79595208 | None:intergenic |
| GTTTGCGCATCAGGAATGAA+AGG | 0.603654 | 5.3:-79599194 | MS.gene38144:intron |
| CAAGGACGAGGGCCTAGGAA+AGG | 0.607320 | 5.3:-79598538 | MS.gene38144:intron |
| TTCCATAACAAGAGAAGACC+AGG | 0.608737 | 5.3:-79598767 | MS.gene38144:intron |
| AACAATTGTTGACAAGGACG+AGG | 0.609353 | 5.3:-79598550 | MS.gene38144:CDS |
| ATTGGCAATAGCTTTGGGGA+TGG | 0.613894 | 5.3:+79596349 | None:intergenic |
| CTAAATACCTGGCAGAAGCA+AGG | 0.614398 | 5.3:-79598987 | MS.gene38144:intron |
| TGGGATGTCTATAAGGATGT+CGG | 0.614417 | 5.3:-79598826 | MS.gene38144:CDS |
| GGTGTTGGTGGTGTTTGCAA+CGG | 0.614883 | 5.3:-79595249 | MS.gene38144:CDS |
| GTACCAAGAAATCCACCCAT+TGG | 0.618602 | 5.3:+79599503 | None:intergenic |
| AATGATGTTGTTGTGGCTGG+TGG | 0.627622 | 5.3:-79599033 | MS.gene38144:CDS |
| GGCATGAAGTCCTACCGCAA+AGG | 0.630736 | 5.3:+79596280 | None:intergenic |
| ACCATCAACAATTGTTGACA+AGG | 0.631110 | 5.3:-79598556 | MS.gene38144:CDS |
| ACTCCGGTTGAAGTGTCTGG+TGG | 0.637623 | 5.3:-79598588 | MS.gene38144:CDS |
| CCAAAGCTATTGCCAATGCA+GGG | 0.639357 | 5.3:-79596343 | MS.gene38144:CDS |
| CGAGCACCACTGCAACCAAG+AGG | 0.657848 | 5.3:+79595771 | None:intergenic |
| CCTAGTTTCAAGGAGACTGG+AGG | 0.659591 | 5.3:-79598053 | MS.gene38144:CDS |
| ATGTCCTCAGTGCTAATTTG+GGG | 0.668607 | 5.3:-79599289 | MS.gene38144:CDS |
| TCACAGGAGCTCCACAACAA+GGG | 0.671465 | 5.3:+79595209 | None:intergenic |
| ACAATTGTTGACAAGGACGA+GGG | 0.682480 | 5.3:-79598549 | MS.gene38144:CDS |
| CAAGTGAATCGTGTCCAAGG+CGG | 0.698460 | 5.3:+79598875 | None:intergenic |
| GTTGCACGTACACCAATGGG+TGG | 0.703066 | 5.3:-79599515 | MS.gene38144:CDS |
| GGAAAAGTAAATGTACATGG+TGG | 0.709458 | 5.3:-79595813 | MS.gene38144:CDS |
| GATTCCTCTATACAGCCTAG+AGG | 0.719455 | 5.3:-79600381 | MS.gene38144:intron |
| CTTGCCCCAAATTAGCACTG+AGG | 0.763431 | 5.3:+79599285 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAGAAAATTTACATATA+TGG | - | chr5.3:79597364-79597383 | MS.gene38144:intron | 10.0% |
| !!! | AAATAAGTCATTTTTATTTT+TGG | + | chr5.3:79595853-79595872 | None:intergenic | 10.0% |
| !!! | ATTTCTTGTAAATTTAATTT+CGG | - | chr5.3:79598938-79598957 | MS.gene38144:intron | 10.0% |
| !! | AAAAGTTATTCATTAGTAAA+AGG | + | chr5.3:79599729-79599748 | None:intergenic | 15.0% |
| !!! | AATTTAAAGTATCTTAAGAA+GGG | + | chr5.3:79595656-79595675 | None:intergenic | 15.0% |
| !!! | AGTTTAATTAATAGTTTTGT+TGG | + | chr5.3:79598562-79598581 | None:intergenic | 15.0% |
| !!! | GATTTGTTTATAAATATTGT+CGG | - | chr5.3:79595452-79595471 | MS.gene38144:intron | 15.0% |
| !!! | TCATAAAAATCAATTTTTGA+AGG | + | chr5.3:79599303-79599322 | None:intergenic | 15.0% |
| !!! | TGTTTTTTTTTTTTTTGAAG+AGG | - | chr5.3:79597431-79597450 | MS.gene38144:intron | 15.0% |
| !!! | TTTTTTGGTAATAAAATACA+CGG | - | chr5.3:79597707-79597726 | MS.gene38144:intron | 15.0% |
| !! | AAAAAAAGATCTCAGTATAT+TGG | + | chr5.3:79597495-79597514 | None:intergenic | 20.0% |
| !! | AATATAGACCTCAAAAATAA+AGG | + | chr5.3:79598630-79598649 | None:intergenic | 20.0% |
| !! | AATTACAAGATCAAATCAAA+AGG | + | chr5.3:79595788-79595807 | None:intergenic | 20.0% |
| !! | ATGATGAAGGAATAAAAAAA+AGG | + | chr5.3:79599682-79599701 | None:intergenic | 20.0% |
| !! | ATGTAAAATCAAGTATGTTA+AGG | - | chr5.3:79598366-79598385 | MS.gene38144:intron | 20.0% |
| !! | CTTCTTAAGATACTTTAAAT+TGG | - | chr5.3:79595655-79595674 | MS.gene38144:intron | 20.0% |
| !! | TCATTAGTAAAAGGAATAAA+CGG | + | chr5.3:79599720-79599739 | None:intergenic | 20.0% |
| !! | TGATATACATAAAGTTCATA+TGG | - | chr5.3:79600192-79600211 | MS.gene38144:intron | 20.0% |
| !! | TGCAAAATAATAGTTATTTG+AGG | + | chr5.3:79599780-79599799 | None:intergenic | 20.0% |
| !! | TTTAGACTAATTGAATCAAA+AGG | + | chr5.3:79600303-79600322 | None:intergenic | 20.0% |
| !!! | AAATCTAGTGTTTTATATGT+TGG | - | chr5.3:79599170-79599189 | MS.gene38144:intron | 20.0% |
| !!! | ATTTCTGTGAAGATAAATTT+TGG | - | chr5.3:79596883-79596902 | MS.gene38144:intron | 20.0% |
| !!! | CAAATAACTATTATTTTGCA+GGG | - | chr5.3:79599780-79599799 | MS.gene38144:intron | 20.0% |
| !!! | CAATTTAAAGTATCTTAAGA+AGG | + | chr5.3:79595657-79595676 | None:intergenic | 20.0% |
| !!! | CTCTTAAATTCTTTGTTTAA+TGG | - | chr5.3:79599997-79600016 | MS.gene38144:intron | 20.0% |
| !!! | TATTGAATTAAACTGATTCA+AGG | - | chr5.3:79596695-79596714 | MS.gene38144:intron | 20.0% |
| !!! | TATTTTTGAGGTCTATATTA+GGG | - | chr5.3:79598631-79598650 | MS.gene38144:CDS | 20.0% |
| !!! | TCAAATAACTATTATTTTGC+AGG | - | chr5.3:79599779-79599798 | MS.gene38144:intron | 20.0% |
| !!! | TCATTTTTATTTTTGGTAAC+AGG | + | chr5.3:79595846-79595865 | None:intergenic | 20.0% |
| !!! | TGTTGCTAATTAATGTTTTT+TGG | - | chr5.3:79595735-79595754 | MS.gene38144:intron | 20.0% |
| !!! | TTATTTTTGAGGTCTATATT+AGG | - | chr5.3:79598630-79598649 | MS.gene38144:CDS | 20.0% |
| !!! | TTCATTTTCATTAAAATCCA+AGG | + | chr5.3:79598970-79598989 | None:intergenic | 20.0% |
| !!! | TTTGATGTATTTTGATATAC+AGG | - | chr5.3:79597878-79597897 | MS.gene38144:intron | 20.0% |
| !!! | TTTTTTTTATTCCTTCATCA+TGG | - | chr5.3:79599681-79599700 | MS.gene38144:intron | 20.0% |
| ! | AATAACTCGATTACTGTTAT+TGG | + | chr5.3:79600066-79600085 | None:intergenic | 25.0% |
| ! | AATATGGACCCAAAAAATAA+AGG | - | chr5.3:79597909-79597928 | MS.gene38144:intron | 25.0% |
| ! | ACTTTAAATTGGAGAATGTA+TGG | - | chr5.3:79595666-79595685 | MS.gene38144:intron | 25.0% |
| ! | ATAGTTAGTGTGAAAACATA+AGG | + | chr5.3:79597976-79597995 | None:intergenic | 25.0% |
| ! | GAAATAAATCCAAAAATACC+TGG | + | chr5.3:79596868-79596887 | None:intergenic | 25.0% |
| ! | GATTGATCATTCACTAAAAT+TGG | + | chr5.3:79597852-79597871 | None:intergenic | 25.0% |
| ! | GTTTCAATGAATCAGATAAA+TGG | + | chr5.3:79595333-79595352 | None:intergenic | 25.0% |
| ! | TATAAATATTGTCGGTGTAA+AGG | - | chr5.3:79595460-79595479 | MS.gene38144:intron | 25.0% |
| ! | TATTGCAAAAAATAGTGCAA+CGG | - | chr5.3:79598670-79598689 | MS.gene38144:intron | 25.0% |
| ! | TCAGGCAAAATCATAAAATA+AGG | - | chr5.3:79595388-79595407 | MS.gene38144:intron | 25.0% |
| ! | TCTATGTATATGTATCTTGT+AGG | + | chr5.3:79597159-79597178 | None:intergenic | 25.0% |
| ! | TGACAAACTACTACATTTAA+AGG | + | chr5.3:79599363-79599382 | None:intergenic | 25.0% |
| ! | TTCTGCATAAATATTGATAC+TGG | + | chr5.3:79598135-79598154 | None:intergenic | 25.0% |
| ! | TTTGAATAATTGAGCATAAC+AGG | + | chr5.3:79600029-79600048 | None:intergenic | 25.0% |
| !! | TATTTTATGATTTTGCCTGA+TGG | + | chr5.3:79595388-79595407 | None:intergenic | 25.0% |
| !! | TCTTTTTAATCATGCTATTG+TGG | + | chr5.3:79598323-79598342 | None:intergenic | 25.0% |
| !! | TGATTCAAGGCTAAAATTTT+AGG | - | chr5.3:79596708-79596727 | MS.gene38144:intron | 25.0% |
| !! | TTGTAAATTTAATTTCGGCA+CGG | - | chr5.3:79598943-79598962 | MS.gene38144:intron | 25.0% |
| !!! | ACTGATGATTTTGATAATCA+AGG | - | chr5.3:79600115-79600134 | MS.gene38144:intron | 25.0% |
| !!! | AGATACTCTTGTCAATTTTT+TGG | - | chr5.3:79597692-79597711 | MS.gene38144:intron | 25.0% |
| !!! | ATTTTTGAGGTCTATATTAG+GGG | - | chr5.3:79598632-79598651 | MS.gene38144:CDS | 25.0% |
| !!! | CAAAGTAAATGAACCTTTTT+TGG | - | chr5.3:79596510-79596529 | MS.gene38144:intron | 25.0% |
| !!! | GTTCATATGGATTTTTTAAG+TGG | - | chr5.3:79600205-79600224 | MS.gene38144:intron | 25.0% |
| !!! | TATTTTTTGGGTCCATATTA+GGG | + | chr5.3:79597908-79597927 | None:intergenic | 25.0% |
| !!! | TTATTTTTTGGGTCCATATT+AGG | + | chr5.3:79597909-79597928 | None:intergenic | 25.0% |
| AAAAAATAAAGGTCCATTGG+TGG | - | chr5.3:79597920-79597939 | MS.gene38144:intron | 30.0% | |
| AAACTCAAGATTTAGTGCAA+TGG | + | chr5.3:79598880-79598899 | None:intergenic | 30.0% | |
| AACTACTACATTTAAAGGTG+TGG | + | chr5.3:79599358-79599377 | None:intergenic | 30.0% | |
| AATACTTCTTCCACAATTGA+TGG | + | chr5.3:79596297-79596316 | None:intergenic | 30.0% | |
| AATGAAATATGAACTGACAC+AGG | + | chr5.3:79596197-79596216 | None:intergenic | 30.0% | |
| AGCAAAATGTAATAGCATGT+TGG | - | chr5.3:79595527-79595546 | MS.gene38144:intron | 30.0% | |
| ATATGTAGCTGCTCTTAAAA+GGG | - | chr5.3:79596260-79596279 | MS.gene38144:intron | 30.0% | |
| ATGAGAATATAGGTATTACG+TGG | - | chr5.3:79597246-79597265 | MS.gene38144:intron | 30.0% | |
| ATTCCTACACTGTAATATTC+TGG | - | chr5.3:79595689-79595708 | MS.gene38144:intron | 30.0% | |
| ATTGTGTAATCATGATCAGA+TGG | - | chr5.3:79597817-79597836 | MS.gene38144:intron | 30.0% | |
| CAAAATCAAACTCTACTCAT+GGG | - | chr5.3:79596016-79596035 | MS.gene38144:intron | 30.0% | |
| CAATCTTCAAGATACTCAAT+CGG | + | chr5.3:79599540-79599559 | None:intergenic | 30.0% | |
| CACTTGCGATTTAATGATAT+AGG | + | chr5.3:79598781-79598800 | None:intergenic | 30.0% | |
| CATCAAACTTGGATATCAAA+AGG | + | chr5.3:79597518-79597537 | None:intergenic | 30.0% | |
| CATTAATTAGCAACAAAAGC+AGG | + | chr5.3:79595730-79595749 | None:intergenic | 30.0% | |
| GCATTTAAGCACATATCTAA+TGG | + | chr5.3:79598903-79598922 | None:intergenic | 30.0% | |
| GGAACATTCAATATTGTAGA+CGG | + | chr5.3:79600282-79600301 | None:intergenic | 30.0% | |
| TAAGGGATAAGAGTAAAGTA+CGG | + | chr5.3:79598008-79598027 | None:intergenic | 30.0% | |
| TAATGTTGATCCATCAATTG+TGG | - | chr5.3:79596284-79596303 | MS.gene38144:intron | 30.0% | |
| TAGTAAAAGGAATAAACGGA+AGG | + | chr5.3:79599716-79599735 | None:intergenic | 30.0% | |
| TATTCTCAGCATGAGAATAT+AGG | - | chr5.3:79597236-79597255 | MS.gene38144:intron | 30.0% | |
| TCAAAATCAAACTCTACTCA+TGG | - | chr5.3:79596015-79596034 | MS.gene38144:intron | 30.0% | |
| TCATTAAATCGCAAGTGTTT+CGG | - | chr5.3:79598784-79598803 | MS.gene38144:CDS | 30.0% | |
| TCATTCTTGTGTACATATGA+CGG | - | chr5.3:79597132-79597151 | MS.gene38144:intron | 30.0% | |
| TGAAATTAATGAAGCCTTTG+CGG | - | chr5.3:79599320-79599339 | MS.gene38144:CDS | 30.0% | |
| TGAGAATATAGGTATTACGT+GGG | - | chr5.3:79597247-79597266 | MS.gene38144:intron | 30.0% | |
| TGCATAAAGACCTATTAAAC+TGG | + | chr5.3:79595884-79595903 | None:intergenic | 30.0% | |
| TGTATATAACACATCTGCTA+TGG | + | chr5.3:79598078-79598097 | None:intergenic | 30.0% | |
| TTAATAGGTCTTTATGCATG+AGG | - | chr5.3:79595886-79595905 | MS.gene38144:intron | 30.0% | |
| TTGTCAATTTATGACACCAT+GGG | - | chr5.3:79599377-79599396 | MS.gene38144:intron | 30.0% | |
| TTTGTCAATTTATGACACCA+TGG | - | chr5.3:79599376-79599395 | MS.gene38144:intron | 30.0% | |
| ! | AAAAAAAAGGAGCATGATGA+AGG | + | chr5.3:79599669-79599688 | None:intergenic | 30.0% |
| ! | TCATGAACAGAAGTTTTCTT+AGG | + | chr5.3:79595582-79595601 | None:intergenic | 30.0% |
| ! | TCATTTGATGTGATTTGTAC+AGG | - | chr5.3:79599209-79599228 | MS.gene38144:CDS | 30.0% |
| ! | TGGTACTTTTCACAATCATT+AGG | - | chr5.3:79595547-79595566 | MS.gene38144:intron | 30.0% |
| ! | TGTAAATTTAATTTCGGCAC+GGG | - | chr5.3:79598944-79598963 | MS.gene38144:intron | 30.0% |
| ! | TTTAATTGGTTTCTGACTGT+AGG | - | chr5.3:79599401-79599420 | MS.gene38144:intron | 30.0% |
| ! | TTTTAATCATGCTATTGTGG+TGG | + | chr5.3:79598320-79598339 | None:intergenic | 30.0% |
| !! | AAAGTTTGATAATGACCTCT+AGG | + | chr5.3:79595251-79595270 | None:intergenic | 30.0% |
| !! | AGTTGATAAATACTCCTCTT+TGG | - | chr5.3:79595810-79595829 | MS.gene38144:CDS | 30.0% |
| !! | ATTGTGGAAGAAGTATTCTT+TGG | - | chr5.3:79596300-79596319 | MS.gene38144:CDS | 30.0% |
| !! | CAAGGCTAAAATTTTAGGAA+AGG | - | chr5.3:79596713-79596732 | MS.gene38144:intron | 30.0% |
| !! | TAGAGTTTGATTTTGATACG+CGG | + | chr5.3:79596011-79596030 | None:intergenic | 30.0% |
| !! | TTGTGGAAGAAGTATTCTTT+GGG | - | chr5.3:79596301-79596320 | MS.gene38144:CDS | 30.0% |
| !!! | ACCAATGGACCTTTATTTTT+TGG | + | chr5.3:79597921-79597940 | None:intergenic | 30.0% |
| !!! | CCAATGGACCTTTATTTTTT+GGG | + | chr5.3:79597920-79597939 | None:intergenic | 30.0% |
| !!! | GATGTCTATGTTTTTTGAAC+AGG | - | chr5.3:79596932-79596951 | MS.gene38144:intron | 30.0% |
| !!! | GTTTTGGTTGAATCATAAAG+AGG | + | chr5.3:79598198-79598217 | None:intergenic | 30.0% |
| AAGCAGAAAAACGGAAAGTA+CGG | - | chr5.3:79600344-79600363 | MS.gene38144:intron | 35.0% | |
| AAGGGATAAGAGTAAAGTAC+GGG | + | chr5.3:79598007-79598026 | None:intergenic | 35.0% | |
| AATGTCCTCAGTGCTAATTT+GGG | - | chr5.3:79596324-79596343 | MS.gene38144:CDS | 35.0% | |
| ACCATCAACAATTGTTGACA+AGG | - | chr5.3:79597058-79597077 | MS.gene38144:intron | 35.0% | |
| AGTGTGAAAACATAAGGTAC+CGG | + | chr5.3:79597970-79597989 | None:intergenic | 35.0% | |
| ATAAATGATGTTGTTGTGGC+TGG | - | chr5.3:79596578-79596597 | MS.gene38144:CDS | 35.0% | |
| ATATGCAGAGAAAGACACAT+AGG | + | chr5.3:79597660-79597679 | None:intergenic | 35.0% | |
| ATGATTCAACCAAAACTTGC+AGG | - | chr5.3:79598202-79598221 | MS.gene38144:intron | 35.0% | |
| ATTGTAGTAGGTGTTTGTAC+AGG | - | chr5.3:79598592-79598611 | MS.gene38144:CDS | 35.0% | |
| CAAAAAATAGTGCAACGGAA+TGG | - | chr5.3:79598675-79598694 | MS.gene38144:intron | 35.0% | |
| CAGAAACCAATTAAAACCCA+TGG | + | chr5.3:79599396-79599415 | None:intergenic | 35.0% | |
| CAGGGAAAAGTAAATGTACA+TGG | - | chr5.3:79599798-79599817 | MS.gene38144:intron | 35.0% | |
| CCCAAAAAATAAAGGTCCAT+TGG | - | chr5.3:79597917-79597936 | MS.gene38144:intron | 35.0% | |
| CCTATGTAAAAAACCTGCTA+CGG | - | chr5.3:79597944-79597963 | MS.gene38144:intron | 35.0% | |
| CCTCAAAAATAAAGGTCTAC+CGG | + | chr5.3:79598622-79598641 | None:intergenic | 35.0% | |
| CTTGCAAATCAGAAACTTCT+TGG | - | chr5.3:79599432-79599451 | MS.gene38144:intron | 35.0% | |
| GAGCTGTTGTAAATAACTCT+GGG | + | chr5.3:79599236-79599255 | None:intergenic | 35.0% | |
| GATATGTAGCTGCTCTTAAA+AGG | - | chr5.3:79596259-79596278 | MS.gene38144:intron | 35.0% | |
| GCTAATGCAAGTTATTAACC+AGG | - | chr5.3:79597304-79597323 | MS.gene38144:intron | 35.0% | |
| GGAAAAGTAAATGTACATGG+TGG | - | chr5.3:79599801-79599820 | MS.gene38144:intron | 35.0% | |
| GGAATAAACGGAAGGAAATA+AGG | + | chr5.3:79599708-79599727 | None:intergenic | 35.0% | |
| GGGTATAAATGATGTTGTTG+TGG | - | chr5.3:79596574-79596593 | MS.gene38144:CDS | 35.0% | |
| GTTTGTTCATTTCATCCATC+AGG | - | chr5.3:79595370-79595389 | MS.gene38144:intron | 35.0% | |
| TAGCTGCAGTTAACCAAAAA+AGG | + | chr5.3:79596526-79596545 | None:intergenic | 35.0% | |
| TATACAGGAAGTCCCTAATA+TGG | - | chr5.3:79597893-79597912 | MS.gene38144:intron | 35.0% | |
| TCCTTGTCAACAATTGTTGA+TGG | + | chr5.3:79597062-79597081 | None:intergenic | 35.0% | |
| TGAGAGTTGAGTGATTTAGT+GGG | - | chr5.3:79597775-79597794 | MS.gene38144:intron | 35.0% | |
| TGCCATGTCTCAAGTTATTT+GGG | + | chr5.3:79597108-79597127 | None:intergenic | 35.0% | |
| TGTCAGAAACAATGGTGATA+GGG | - | chr5.3:79598491-79598510 | MS.gene38144:intron | 35.0% | |
| TTATTAACCAGGAGTAGGAT+TGG | - | chr5.3:79597315-79597334 | MS.gene38144:intron | 35.0% | |
| TTCTCAGTCACCAGTTTAAT+AGG | - | chr5.3:79595871-79595890 | MS.gene38144:intron | 35.0% | |
| TTGAGAGTTGAGTGATTTAG+TGG | - | chr5.3:79597774-79597793 | MS.gene38144:intron | 35.0% | |
| TTGCCATGTCTCAAGTTATT+TGG | + | chr5.3:79597109-79597128 | None:intergenic | 35.0% | |
| ! | AAGAAAATGGTTACTTTGGG+TGG | - | chr5.3:79596997-79597016 | MS.gene38144:intron | 35.0% |
| ! | AAGAGAAGACCAGGTATTTT+TGG | - | chr5.3:79596856-79596875 | MS.gene38144:intron | 35.0% |
| ! | AATGTTCTTGATGACAGTGA+TGG | - | chr5.3:79598990-79599009 | MS.gene38144:CDS | 35.0% |
| ! | ACAGAAGTTTAGAGCCATTA+AGG | + | chr5.3:79599641-79599660 | None:intergenic | 35.0% |
| ! | ACCCAAAGTAACCATTTTCT+TGG | + | chr5.3:79596998-79597017 | None:intergenic | 35.0% |
| ! | AGAAAATGGTTACTTTGGGT+GGG | - | chr5.3:79596998-79597017 | MS.gene38144:intron | 35.0% |
| ! | CAGGTAATTTTCAACCAAAG+AGG | + | chr5.3:79595827-79595846 | None:intergenic | 35.0% |
| ! | CCCAAAGTAACCATTTTCTT+GGG | + | chr5.3:79596997-79597016 | None:intergenic | 35.0% |
| ! | CCCAAGAAAATGGTTACTTT+GGG | - | chr5.3:79596994-79597013 | MS.gene38144:intron | 35.0% |
| ! | GAAACTTCTTGGACTAGATT+CGG | - | chr5.3:79599443-79599462 | MS.gene38144:intron | 35.0% |
| ! | GATGTTGAAAGATGGTTTGT+GGG | - | chr5.3:79596769-79596788 | MS.gene38144:intron | 35.0% |
| ! | TAACTCTCTAACTGACTTCA+TGG | + | chr5.3:79598827-79598846 | None:intergenic | 35.0% |
| ! | TTTTTACATAGGTCCACCAA+TGG | + | chr5.3:79597936-79597955 | None:intergenic | 35.0% |
| !! | ATGACACCATGGGTTTTAAT+TGG | - | chr5.3:79599387-79599406 | MS.gene38144:intron | 35.0% |
| AACAATTGTTGACAAGGACG+AGG | - | chr5.3:79597064-79597083 | MS.gene38144:intron | 40.0% | |
| AATAGCTATCGAGCCTAACT+TGG | + | chr5.3:79596157-79596176 | None:intergenic | 40.0% | |
| AATTAAGAATCCCACCTGTG+AGG | + | chr5.3:79598432-79598451 | None:intergenic | 40.0% | |
| ACAATTGTTGACAAGGACGA+GGG | - | chr5.3:79597065-79597084 | MS.gene38144:intron | 40.0% | |
| ACCTTCATCATGGTCCTTAA+TGG | - | chr5.3:79599624-79599643 | MS.gene38144:intron | 40.0% | |
| AGAGAGAGAAACAGACAGTA+AGG | + | chr5.3:79598026-79598045 | None:intergenic | 40.0% | |
| AGGTCTTTATGCATGAGGTT+GGG | - | chr5.3:79595891-79595910 | MS.gene38144:intron | 40.0% | |
| ATCTTAAGAAGGGAAGAGCT+TGG | + | chr5.3:79595646-79595665 | None:intergenic | 40.0% | |
| ATGTCCTCAGTGCTAATTTG+GGG | - | chr5.3:79596325-79596344 | MS.gene38144:CDS | 40.0% | |
| ATTAATGAAGCCTTTGCGGT+AGG | - | chr5.3:79599324-79599343 | MS.gene38144:CDS | 40.0% | |
| ATTCAACCAAAACTTGCAGG+AGG | - | chr5.3:79598205-79598224 | MS.gene38144:intron | 40.0% | |
| CAAAAATAAAGGTCTACCGG+TGG | + | chr5.3:79598619-79598638 | None:intergenic | 40.0% | |
| CAAACTTCGACCTAGTTTCA+AGG | - | chr5.3:79597551-79597570 | MS.gene38144:intron | 40.0% | |
| CAATATGAACTGAAGCCTGA+AGG | + | chr5.3:79599139-79599158 | None:intergenic | 40.0% | |
| CAATGCTTCTAGCATAAGGT+TGG | - | chr5.3:79597599-79597618 | MS.gene38144:intron | 40.0% | |
| CACCCAAATAACTTGAGACA+TGG | - | chr5.3:79597103-79597122 | MS.gene38144:intron | 40.0% | |
| CAGAGAAAGACACATAGGAA+AGG | + | chr5.3:79597655-79597674 | None:intergenic | 40.0% | |
| CAGGTCATTGCAAAAATCAC+TGG | - | chr5.3:79599065-79599084 | MS.gene38144:CDS | 40.0% | |
| CCTACACTGTAATATTCTGG+CGG | - | chr5.3:79595692-79595711 | MS.gene38144:intron | 40.0% | |
| CGTTGCAAATAAAAGTCCAC+TGG | + | chr5.3:79598533-79598552 | None:intergenic | 40.0% | |
| CTATATCCCTTGCTCATTCT+AGG | - | chr5.3:79595620-79595639 | MS.gene38144:intron | 40.0% | |
| CTATGGAACCTAAGAATCAG+AGG | + | chr5.3:79598061-79598080 | None:intergenic | 40.0% | |
| CTGAAGCAACTGATTGTAGT+AGG | - | chr5.3:79598580-79598599 | MS.gene38144:CDS | 40.0% | |
| GAATGTCCTCAGTGCTAATT+TGG | - | chr5.3:79596323-79596342 | MS.gene38144:CDS | 40.0% | |
| GAGAGAGAAACAGACAGTAA+GGG | + | chr5.3:79598025-79598044 | None:intergenic | 40.0% | |
| GAGAGTTGAGTGATTTAGTG+GGG | - | chr5.3:79597776-79597795 | MS.gene38144:intron | 40.0% | |
| GCAACTTTCACATGATGACA+AGG | + | chr5.3:79599486-79599505 | None:intergenic | 40.0% | |
| GCAAGTTATTAACCAGGAGT+AGG | - | chr5.3:79597310-79597329 | MS.gene38144:intron | 40.0% | |
| GCCCAAGAAAATGGTTACTT+TGG | - | chr5.3:79596993-79597012 | MS.gene38144:intron | 40.0% | |
| GCTCACATTTACCTTCATCA+TGG | - | chr5.3:79599614-79599633 | MS.gene38144:intron | 40.0% | |
| GGAAATAAGGACCATGATGA+AGG | + | chr5.3:79599695-79599714 | None:intergenic | 40.0% | |
| GGAATTTCTGCCCAAGAAAA+TGG | - | chr5.3:79596984-79597003 | MS.gene38144:intron | 40.0% | |
| GGAGCTGTTGTAAATAACTC+TGG | + | chr5.3:79599237-79599256 | None:intergenic | 40.0% | |
| GGATGTTGAAAGATGGTTTG+TGG | - | chr5.3:79596768-79596787 | MS.gene38144:intron | 40.0% | |
| GTCTAAACGTCACTACATAC+AGG | - | chr5.3:79600316-79600335 | MS.gene38144:intron | 40.0% | |
| GTCTATAAGGATGTCGGTAT+GGG | - | chr5.3:79596794-79596813 | MS.gene38144:intron | 40.0% | |
| GTGTCAGAAACAATGGTGAT+AGG | - | chr5.3:79598490-79598509 | MS.gene38144:intron | 40.0% | |
| GTTAACAAAGTTTGCGCATC+AGG | - | chr5.3:79596411-79596430 | MS.gene38144:intron | 40.0% | |
| GTTAACAGTAGTGCAGACTA+CGG | + | chr5.3:79596397-79596416 | None:intergenic | 40.0% | |
| TAACTTGGCAGCATCAAACT+TGG | + | chr5.3:79597529-79597548 | None:intergenic | 40.0% | |
| TAGGTCTTTATGCATGAGGT+TGG | - | chr5.3:79595890-79595909 | MS.gene38144:intron | 40.0% | |
| TCACATGATGACAAGGTCAA+GGG | + | chr5.3:79599479-79599498 | None:intergenic | 40.0% | |
| TGCCACCAGATCAATAAAGT+CGG | + | chr5.3:79598264-79598283 | None:intergenic | 40.0% | |
| TGGGATGTCTATAAGGATGT+CGG | - | chr5.3:79596788-79596807 | MS.gene38144:intron | 40.0% | |
| TGGTCATACCTCTGATTCTT+AGG | - | chr5.3:79598050-79598069 | MS.gene38144:CDS | 40.0% | |
| TGTCTATAAGGATGTCGGTA+TGG | - | chr5.3:79596793-79596812 | MS.gene38144:intron | 40.0% | |
| TGTTGTAGACCTACACTTGT+AGG | - | chr5.3:79598465-79598484 | MS.gene38144:intron | 40.0% | |
| TTAGGCTCGATAGCTATTGA+AGG | - | chr5.3:79596159-79596178 | MS.gene38144:intron | 40.0% | |
| TTCACATGATGACAAGGTCA+AGG | + | chr5.3:79599480-79599499 | None:intergenic | 40.0% | |
| TTCCATAACAAGAGAAGACC+AGG | - | chr5.3:79596847-79596866 | MS.gene38144:intron | 40.0% | |
| TTCGTCCGACTTTATTGATC+TGG | - | chr5.3:79598256-79598275 | MS.gene38144:intron | 40.0% | |
| TTTGGGTGATTACCTTTCCT+AGG | + | chr5.3:79597091-79597110 | None:intergenic | 40.0% | |
| ! | AAAAACGGAAAGTACGGTGT+TGG | - | chr5.3:79600350-79600369 | MS.gene38144:intron | 40.0% |
| ! | GACACGATTCACTTGTTGAT+GGG | - | chr5.3:79596747-79596766 | MS.gene38144:intron | 40.0% |
| ! | GCTGCACAGAGTATTCAATT+GGG | - | chr5.3:79596554-79596573 | MS.gene38144:CDS | 40.0% |
| ! | GGTCTTCTCTTGTTATGGAA+TGG | + | chr5.3:79596847-79596866 | None:intergenic | 40.0% |
| ! | GTTGATGGGATGTTGAAAGA+TGG | - | chr5.3:79596761-79596780 | MS.gene38144:intron | 40.0% |
| ! | TACCTGGTCTTCTCTTGTTA+TGG | + | chr5.3:79596852-79596871 | None:intergenic | 40.0% |
| ! | TGCTGCACAGAGTATTCAAT+TGG | - | chr5.3:79596553-79596572 | MS.gene38144:CDS | 40.0% |
| ! | TGGTTTGTGGGATGTCTATA+AGG | - | chr5.3:79596781-79596800 | MS.gene38144:intron | 40.0% |
| ! | TTTTTGCACAAGTTCACCAG+TGG | - | chr5.3:79598514-79598533 | MS.gene38144:intron | 40.0% |
| !! | CAGGTACTGAAGCAGAAAAA+CGG | - | chr5.3:79600335-79600354 | MS.gene38144:intron | 40.0% |
| !!! | CCGGTAGACCTTTATTTTTG+AGG | - | chr5.3:79598619-79598638 | MS.gene38144:CDS | 40.0% |
| !!! | CCGTAGCAGGTTTTTTACAT+AGG | + | chr5.3:79597947-79597966 | None:intergenic | 40.0% |
| AAATCAAAAGGCCCGTCAAG+CGG | + | chr5.3:79595776-79595795 | None:intergenic | 45.0% | |
| AATGATGTTGTTGTGGCTGG+TGG | - | chr5.3:79596581-79596600 | MS.gene38144:CDS | 45.0% | |
| ACAAACTCCAATCCTACTCC+TGG | + | chr5.3:79597325-79597344 | None:intergenic | 45.0% | |
| AGGTCGAAGTTTGCGTAACT+TGG | + | chr5.3:79597544-79597563 | None:intergenic | 45.0% | |
| ATATTGACCTTGCTTCTGCC+AGG | + | chr5.3:79596637-79596656 | None:intergenic | 45.0% | |
| ATGACCTCTAGGCTGTATAG+AGG | + | chr5.3:79595240-79595259 | None:intergenic | 45.0% | |
| CAACAAGTGAATCGTGTCCA+AGG | + | chr5.3:79596745-79596764 | None:intergenic | 45.0% | |
| CCAAAGCTATTGCCAATGCA+GGG | - | chr5.3:79599271-79599290 | MS.gene38144:CDS | 45.0% | |
| CCGCCAGAATATTACAGTGT+AGG | + | chr5.3:79595695-79595714 | None:intergenic | 45.0% | |
| CGGACGAAACAGTTAGCTAA+CGG | + | chr5.3:79598244-79598263 | None:intergenic | 45.0% | |
| CTAAATACCTGGCAGAAGCA+AGG | - | chr5.3:79596627-79596646 | MS.gene38144:intron | 45.0% | |
| CTGGCAATGCTTCTAGCATA+AGG | - | chr5.3:79597595-79597614 | MS.gene38144:intron | 45.0% | |
| CTTGCTTCTGCCAGGTATTT+AGG | + | chr5.3:79596629-79596648 | None:intergenic | 45.0% | |
| GAATCTGAAGATGCTGCTGT+TGG | + | chr5.3:79595218-79595237 | None:intergenic | 45.0% | |
| GATTCCTCTATACAGCCTAG+AGG | - | chr5.3:79595233-79595252 | MS.gene38144:CDS | 45.0% | |
| GCCATTAAGGACCATGATGA+AGG | + | chr5.3:79599628-79599647 | None:intergenic | 45.0% | |
| GTACCAAGAAATCCACCCAT+TGG | + | chr5.3:79596114-79596133 | None:intergenic | 45.0% | |
| GTAGGCAGTGTCAGAAACAA+TGG | - | chr5.3:79598483-79598502 | MS.gene38144:intron | 45.0% | |
| GTATCATTGGGTCATCCTCT+TGG | - | chr5.3:79599828-79599847 | MS.gene38144:intron | 45.0% | |
| GTCCGACTTTATTGATCTGG+TGG | - | chr5.3:79598259-79598278 | MS.gene38144:intron | 45.0% | |
| GTTTGCGCATCAGGAATGAA+AGG | - | chr5.3:79596420-79596439 | MS.gene38144:intron | 45.0% | |
| TGAATATGAGCTGCACCTTC+AGG | - | chr5.3:79599121-79599140 | MS.gene38144:intron | 45.0% | |
| TGATGGTTTCTCTACCCTCA+CGG | + | chr5.3:79598295-79598314 | None:intergenic | 45.0% | |
| TGGTTTCTGACTGTAGGTTG+TGG | - | chr5.3:79599407-79599426 | MS.gene38144:intron | 45.0% | |
| TGTAAAAAACCTGCTACGGC+CGG | - | chr5.3:79597948-79597967 | MS.gene38144:intron | 45.0% | |
| TTACATTGTCCACCGCTTGA+CGG | - | chr5.3:79595761-79595780 | MS.gene38144:CDS | 45.0% | |
| ! | ACACCAATGGGTGGATTTCT+TGG | - | chr5.3:79596108-79596127 | MS.gene38144:intron | 45.0% |
| ! | ACATGGTGGAGCTGTATCAT+TGG | - | chr5.3:79599815-79599834 | MS.gene38144:intron | 45.0% |
| ! | CATGGTGGAGCTGTATCATT+GGG | - | chr5.3:79599816-79599835 | MS.gene38144:intron | 45.0% |
| ! | CCTGCATTGGCAATAGCTTT+GGG | + | chr5.3:79599273-79599292 | None:intergenic | 45.0% |
| ! | CGTATCCTGGTCACACTTTT+GGG | - | chr5.3:79599864-79599883 | MS.gene38144:intron | 45.0% |
| ! | CTGCATTGGCAATAGCTTTG+GGG | + | chr5.3:79599272-79599291 | None:intergenic | 45.0% |
| ! | GGACACGATTCACTTGTTGA+TGG | - | chr5.3:79596746-79596765 | MS.gene38144:intron | 45.0% |
| ! | GTATCCTGGTCACACTTTTG+GGG | - | chr5.3:79599865-79599884 | MS.gene38144:intron | 45.0% |
| ! | GTCTGTTTCTCTCTCTTCGA+TGG | - | chr5.3:79598030-79598049 | MS.gene38144:CDS | 45.0% |
| ! | TATCCTGGTCACACTTTTGG+GGG | - | chr5.3:79599866-79599885 | MS.gene38144:intron | 45.0% |
| ! | TCGTATCCTGGTCACACTTT+TGG | - | chr5.3:79599863-79599882 | MS.gene38144:intron | 45.0% |
| !! | AATAGCTTTGGGGATGGCAA+TGG | + | chr5.3:79599262-79599281 | None:intergenic | 45.0% |
| !! | AGTTTTGGTGAGTGGAGAGA+AGG | - | chr5.3:79599025-79599044 | MS.gene38144:CDS | 45.0% |
| !! | ATGCTATTGTGGTGGACTGA+TGG | + | chr5.3:79598312-79598331 | None:intergenic | 45.0% |
| !! | ATTGGCAATAGCTTTGGGGA+TGG | + | chr5.3:79599268-79599287 | None:intergenic | 45.0% |
| !! | GAGAGAAGGCATTGAAGCTT+GGG | - | chr5.3:79599039-79599058 | MS.gene38144:CDS | 45.0% |
| !!! | GCTGCATTAGTTTTGGTGAG+TGG | - | chr5.3:79599017-79599036 | MS.gene38144:CDS | 45.0% |
| !!! | TGGTGCTGCTGCATTAGTTT+TGG | - | chr5.3:79599010-79599029 | MS.gene38144:CDS | 45.0% |
| !!! | TTAACAAATTTTTAATATTT+GGG | + | chr5.3:79597205-79597224 | None:intergenic | 5.0% |
| !!! | TTTAACAAATTTTTAATATT+TGG | + | chr5.3:79597206-79597225 | None:intergenic | 5.0% |
| AAGTGAATCGTGTCCAAGGC+GGG | + | chr5.3:79596741-79596760 | None:intergenic | 50.0% | |
| ACTGGAGGTTCTGTTACTGC+TGG | - | chr5.3:79597576-79597595 | MS.gene38144:intron | 50.0% | |
| AGAATCCCACCTGTGAGGAT+CGG | + | chr5.3:79598427-79598446 | None:intergenic | 50.0% | |
| AGCTATCGAGCCTAACTTGG+TGG | + | chr5.3:79596154-79596173 | None:intergenic | 50.0% | |
| AGCTATTGCCAATGCAGGGT+TGG | - | chr5.3:79599275-79599294 | MS.gene38144:CDS | 50.0% | |
| AGCTTGGCCTAGAATGAGCA+AGG | + | chr5.3:79595630-79595649 | None:intergenic | 50.0% | |
| AGGTGTTTGTACAGGTCCAC+CGG | - | chr5.3:79598600-79598619 | MS.gene38144:CDS | 50.0% | |
| CAACCAAAACTTGCAGGAGG+CGG | - | chr5.3:79598208-79598227 | MS.gene38144:intron | 50.0% | |
| CAAGTGAATCGTGTCCAAGG+CGG | + | chr5.3:79596742-79596761 | None:intergenic | 50.0% | |
| CCCAAAGCTATTGCCAATGC+AGG | - | chr5.3:79599270-79599289 | MS.gene38144:CDS | 50.0% | |
| CCTAGTTTCAAGGAGACTGG+AGG | - | chr5.3:79597561-79597580 | MS.gene38144:intron | 50.0% | |
| CCTCCAGTCTCCTTGAAACT+AGG | + | chr5.3:79597564-79597583 | None:intergenic | 50.0% | |
| CGACCTAGTTTCAAGGAGAC+TGG | - | chr5.3:79597558-79597577 | MS.gene38144:intron | 50.0% | |
| CTGACACTGCCTACAAGTGT+AGG | + | chr5.3:79598477-79598496 | None:intergenic | 50.0% | |
| CTTCCACCAGACACTTCAAC+CGG | + | chr5.3:79597032-79597051 | None:intergenic | 50.0% | |
| CTTGCCCCAAATTAGCACTG+AGG | + | chr5.3:79596332-79596351 | None:intergenic | 50.0% | |
| CTTTGGGTGGGAAATCACTC+CGG | - | chr5.3:79597010-79597029 | MS.gene38144:intron | 50.0% | |
| GCTTGGCCTAGAATGAGCAA+GGG | + | chr5.3:79595629-79595648 | None:intergenic | 50.0% | |
| GTCCAGCGTACCTAAATACC+TGG | - | chr5.3:79596616-79596635 | MS.gene38144:intron | 50.0% | |
| TACATTGTCCACCGCTTGAC+GGG | - | chr5.3:79595762-79595781 | MS.gene38144:CDS | 50.0% | |
| TAGAACCCCTTTCTGTGCTG+TGG | - | chr5.3:79599570-79599589 | MS.gene38144:intron | 50.0% | |
| TCACAGGAGCTCCACAACAA+GGG | + | chr5.3:79600408-79600427 | None:intergenic | 50.0% | |
| TCTACACTACCGATCCTCAC+AGG | - | chr5.3:79598415-79598434 | MS.gene38144:intron | 50.0% | |
| TCTGTACCTGCCACCAAGTT+AGG | - | chr5.3:79596141-79596160 | MS.gene38144:intron | 50.0% | |
| TGCACAGATGTTTGCGTCGT+TGG | - | chr5.3:79596075-79596094 | MS.gene38144:intron | 50.0% | |
| TGCCAGGTATTTAGGTACGC+TGG | + | chr5.3:79596621-79596640 | None:intergenic | 50.0% | |
| TGGATATGCTGATGCTGCTC+AGG | - | chr5.3:79599085-79599104 | MS.gene38144:intron | 50.0% | |
| TGTTGTTGTGGCTGGTGGTA+TGG | - | chr5.3:79596586-79596605 | MS.gene38144:CDS | 50.0% | |
| TTTAGGAAAGGATCCCGCCT+TGG | - | chr5.3:79596725-79596744 | MS.gene38144:intron | 50.0% | |
| ! | AACGGAAAGTACGGTGTTGG+TGG | - | chr5.3:79600353-79600372 | MS.gene38144:intron | 50.0% |
| ! | ATACCCCCAAAAGTGTGACC+AGG | + | chr5.3:79599872-79599891 | None:intergenic | 50.0% |
| ! | ATCACTCCGGTTGAAGTGTC+TGG | - | chr5.3:79597023-79597042 | MS.gene38144:intron | 50.0% |
| ! | CCCTGCATTGGCAATAGCTT+TGG | + | chr5.3:79599274-79599293 | None:intergenic | 50.0% |
| ! | GGTGTTGCACGTACACCAAT+GGG | - | chr5.3:79596096-79596115 | MS.gene38144:intron | 50.0% |
| ! | GGTTGAAGTGTCTGGTGGAA+GGG | - | chr5.3:79597031-79597050 | MS.gene38144:intron | 50.0% |
| ! | GTTGAAGTGTCTGGTGGAAG+GGG | - | chr5.3:79597032-79597051 | MS.gene38144:intron | 50.0% |
| ! | TTTAATTTCGGCACGGGCCT+TGG | - | chr5.3:79598950-79598969 | MS.gene38144:intron | 50.0% |
| !! | GGAGAGAAGGCATTGAAGCT+TGG | - | chr5.3:79599038-79599057 | MS.gene38144:CDS | 50.0% |
| !! | GGTGTTGGTGGTGTTTGCAA+CGG | - | chr5.3:79600365-79600384 | MS.gene38144:intron | 50.0% |
| !! | TGGTGTTGCACGTACACCAA+TGG | - | chr5.3:79596095-79596114 | MS.gene38144:intron | 50.0% |
| !!! | GCAGTTCAGAGTTTTGAGCG+TGG | - | chr5.3:79596963-79596982 | MS.gene38144:intron | 50.0% |
| ACACGCTCCACAGCACAGAA+AGG | + | chr5.3:79599580-79599599 | None:intergenic | 55.0% | |
| ACACTACCGATCCTCACAGG+TGG | - | chr5.3:79598418-79598437 | MS.gene38144:intron | 55.0% | |
| ACGCTCCACAGCACAGAAAG+GGG | + | chr5.3:79599578-79599597 | None:intergenic | 55.0% | |
| AGACAAGCTGCTCTTGGAGC+AGG | - | chr5.3:79596360-79596379 | MS.gene38144:CDS | 55.0% | |
| CACGCTCCACAGCACAGAAA+GGG | + | chr5.3:79599579-79599598 | None:intergenic | 55.0% | |
| CACTACCGATCCTCACAGGT+GGG | - | chr5.3:79598419-79598438 | MS.gene38144:intron | 55.0% | |
| CCAAGAGCAGCTTGTCTAGC+AGG | + | chr5.3:79596357-79596376 | None:intergenic | 55.0% | |
| CCTGCTAGACAAGCTGCTCT+TGG | - | chr5.3:79596354-79596373 | MS.gene38144:CDS | 55.0% | |
| GGCATGAAGTCCTACCGCAA+AGG | + | chr5.3:79599337-79599356 | None:intergenic | 55.0% | |
| GGTCATCCTCTTGGTTGCAG+TGG | - | chr5.3:79599837-79599856 | MS.gene38144:intron | 55.0% | |
| GTGGCAAATCAGCACCGTGA+GGG | - | chr5.3:79598278-79598297 | MS.gene38144:intron | 55.0% | |
| GTTGCACGTACACCAATGGG+TGG | - | chr5.3:79596099-79596118 | MS.gene38144:intron | 55.0% | |
| TGAAGGCTCCAACCCTGCAT+TGG | + | chr5.3:79599286-79599305 | None:intergenic | 55.0% | |
| TGGTGCATCTGCCCTTGTTG+TGG | - | chr5.3:79600394-79600413 | MS.gene38144:CDS | 55.0% | |
| TTGCAGTGGTGCTCGTATCC+TGG | - | chr5.3:79599851-79599870 | MS.gene38144:intron | 55.0% | |
| ! | ACTCCGGTTGAAGTGTCTGG+TGG | - | chr5.3:79597026-79597045 | MS.gene38144:intron | 55.0% |
| ! | ATCGAGCCTAACTTGGTGGC+AGG | + | chr5.3:79596150-79596169 | None:intergenic | 55.0% |
| ! | CGGTTGAAGTGTCTGGTGGA+AGG | - | chr5.3:79597030-79597049 | MS.gene38144:intron | 55.0% |
| ! | GGCATTGAAGCTTGGGCTTC+AGG | - | chr5.3:79599046-79599065 | MS.gene38144:CDS | 55.0% |
| ! | TCTCCGCCTCCTGCAAGTTT+TGG | + | chr5.3:79598214-79598233 | None:intergenic | 55.0% |
| !! | GTTGGTGGTGTTTGCAACGG+AGG | - | chr5.3:79600368-79600387 | MS.gene38144:intron | 55.0% |
| CAAGGACGAGGGCCTAGGAA+AGG | - | chr5.3:79597076-79597095 | MS.gene38144:intron | 60.0% | |
| CGAGCACCACTGCAACCAAG+AGG | + | chr5.3:79599846-79599865 | None:intergenic | 60.0% | |
| GGTGGCAAATCAGCACCGTG+AGG | - | chr5.3:79598277-79598296 | MS.gene38144:intron | 60.0% | |
| GGTGGTGTTTGCAACGGAGG+AGG | - | chr5.3:79600371-79600390 | MS.gene38144:intron | 60.0% | |
| GGTGTTTGCAACGGAGGAGG+TGG | - | chr5.3:79600374-79600393 | MS.gene38144:intron | 60.0% | |
| GTTGACAAGGACGAGGGCCT+AGG | - | chr5.3:79597071-79597090 | MS.gene38144:intron | 60.0% | |
| TCAAAAGGCCCGTCAAGCGG+TGG | + | chr5.3:79595773-79595792 | None:intergenic | 60.0% | |
| !! | CATAAGGTACCGGCCGTAGC+AGG | + | chr5.3:79597960-79597979 | None:intergenic | 60.0% |
| !! | GCTTTGGGGATGGCAATGGC+TGG | + | chr5.3:79599258-79599277 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 79595209 | 79600427 | 79595209 | ID=MS.gene38144 |
| chr5.3 | mRNA | 79595209 | 79600427 | 79595209 | ID=MS.gene38144.t1;Parent=MS.gene38144 |
| chr5.3 | exon | 79600382 | 79600427 | 79600382 | ID=MS.gene38144.t1.exon1;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79600382 | 79600427 | 79600382 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| chr5.3 | exon | 79599456 | 79599554 | 79599456 | ID=MS.gene38144.t1.exon2;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79599456 | 79599554 | 79599456 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| chr5.3 | exon | 79599195 | 79599368 | 79599195 | ID=MS.gene38144.t1.exon3;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79599195 | 79599368 | 79599195 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| chr5.3 | exon | 79598988 | 79599093 | 79598988 | ID=MS.gene38144.t1.exon4;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79598988 | 79599093 | 79598988 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| chr5.3 | exon | 79598768 | 79598906 | 79598768 | ID=MS.gene38144.t1.exon5;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79598768 | 79598906 | 79598768 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| chr5.3 | exon | 79598539 | 79598682 | 79598539 | ID=MS.gene38144.t1.exon6;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79598539 | 79598682 | 79598539 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| chr5.3 | exon | 79598020 | 79598105 | 79598020 | ID=MS.gene38144.t1.exon7;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79598020 | 79598105 | 79598020 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| chr5.3 | exon | 79596530 | 79596629 | 79596530 | ID=MS.gene38144.t1.exon8;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79596530 | 79596629 | 79596530 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| chr5.3 | exon | 79596295 | 79596405 | 79596295 | ID=MS.gene38144.t1.exon9;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79596295 | 79596405 | 79596295 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| chr5.3 | exon | 79596172 | 79596213 | 79596172 | ID=MS.gene38144.t1.exon10;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79596172 | 79596213 | 79596172 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| chr5.3 | exon | 79595749 | 79595835 | 79595749 | ID=MS.gene38144.t1.exon11;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79595749 | 79595835 | 79595749 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| chr5.3 | exon | 79595209 | 79595298 | 79595209 | ID=MS.gene38144.t1.exon12;Parent=MS.gene38144.t1 |
| chr5.3 | CDS | 79595209 | 79595298 | 79595209 | ID=cds.MS.gene38144.t1;Parent=MS.gene38144.t1 |
| Gene Sequence |
| Protein sequence |
