Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062514.t1 | XP_003618039.1 | 99.3 | 407 | 2 | 1 | 1 | 406 | 1 | 407 | 7.10E-219 | 769.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062514.t1 | Q8S4Y1 | 84.6 | 402 | 62 | 0 | 5 | 406 | 2 | 403 | 2.4e-191 | 669.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062514.t1 | G7K0L3 | 99.3 | 407 | 2 | 1 | 1 | 406 | 1 | 407 | 5.2e-219 | 769.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene028573 | MS.gene062514 | PPI |
MS.gene53674 | MS.gene062514 | PPI |
MS.gene96906 | MS.gene062514 | PPI |
MS.gene062501 | MS.gene062514 | PPI |
MS.gene40160 | MS.gene062514 | PPI |
MS.gene64334 | MS.gene062514 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062514.t1 | MTR_5g098310 | 99.263 | 407 | 2 | 1 | 1 | 406 | 1 | 407 | 0.0 | 806 |
MS.gene062514.t1 | MTR_0449s0040 | 98.567 | 349 | 4 | 1 | 1 | 348 | 1 | 349 | 0.0 | 694 |
MS.gene062514.t1 | MTR_4g134090 | 80.353 | 397 | 78 | 0 | 10 | 406 | 2 | 398 | 0.0 | 668 |
MS.gene062514.t1 | MTR_4g134090 | 80.867 | 392 | 75 | 0 | 15 | 406 | 14 | 405 | 0.0 | 662 |
MS.gene062514.t1 | MTR_4g134090 | 78.884 | 251 | 53 | 0 | 10 | 260 | 2 | 252 | 4.40e-150 | 427 |
MS.gene062514.t1 | MTR_4g022430 | 37.685 | 406 | 218 | 12 | 15 | 404 | 45 | 431 | 1.20e-64 | 213 |
MS.gene062514.t1 | MTR_1g047210 | 34.568 | 405 | 232 | 9 | 15 | 404 | 52 | 438 | 7.43e-58 | 196 |
MS.gene062514.t1 | MTR_0837s0020 | 42.017 | 119 | 65 | 3 | 23 | 138 | 808 | 925 | 1.91e-15 | 79.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062514.t1 | AT5G48230 | 84.577 | 402 | 62 | 0 | 5 | 406 | 2 | 403 | 0.0 | 672 |
MS.gene062514.t1 | AT5G47720 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
MS.gene062514.t1 | AT5G47720 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
MS.gene062514.t1 | AT5G47720 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
MS.gene062514.t1 | AT5G47720 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
MS.gene062514.t1 | AT5G48230 | 84.635 | 397 | 61 | 0 | 10 | 406 | 2 | 398 | 0.0 | 662 |
MS.gene062514.t1 | AT5G47720 | 79.337 | 392 | 81 | 0 | 15 | 406 | 21 | 412 | 0.0 | 656 |
MS.gene062514.t1 | AT1G04710 | 35.135 | 407 | 227 | 9 | 15 | 404 | 43 | 429 | 2.60e-63 | 210 |
MS.gene062514.t1 | AT2G33150 | 34.783 | 414 | 241 | 8 | 4 | 404 | 40 | 437 | 1.05e-60 | 204 |
MS.gene062514.t1 | AT5G48880 | 37.101 | 407 | 221 | 12 | 15 | 404 | 7 | 395 | 8.87e-60 | 200 |
MS.gene062514.t1 | AT5G48880 | 37.101 | 407 | 221 | 12 | 15 | 404 | 50 | 438 | 1.23e-59 | 201 |
MS.gene062514.t1 | AT5G48880 | 37.101 | 407 | 221 | 12 | 15 | 404 | 50 | 438 | 1.23e-59 | 201 |
MS.gene062514.t1 | AT5G48880 | 37.101 | 407 | 221 | 12 | 15 | 404 | 50 | 438 | 1.23e-59 | 201 |
Find 126 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAACGTCCTTAGTGCTAATT+TGG | 0.180846 | 5.1:-78779110 | MS.gene062514:CDS |
GATATGTAGCTGCTCTTAAA+AGG | 0.206062 | 5.1:-78779174 | MS.gene062514:intron |
GGCATTGAAGCTTGGGCTTC+AGG | 0.214435 | 5.1:-78776802 | MS.gene062514:CDS |
TCGTATCCTGGTAACACTTT+TGG | 0.258252 | 5.1:-78775269 | MS.gene062514:CDS |
CTTGCAAATCAGAAACTTCT+TGG | 0.274997 | 5.1:-78776424 | MS.gene062514:CDS |
ATTGTGGAAGAAGTATTCTT+TGG | 0.277800 | 5.1:-78779133 | MS.gene062514:CDS |
CCCTGCATTGGCAATAGCTT+TGG | 0.307145 | 5.1:+78776585 | None:intergenic |
CCTTATGCTGGAAGCATTGC+CGG | 0.313728 | 5.1:+78777444 | None:intergenic |
CCTGCATTGGCAATAGCTTT+GGG | 0.320450 | 5.1:+78776586 | None:intergenic |
ACACCAATGGGTGGGTTTCT+TGG | 0.326350 | 5.1:-78779325 | MS.gene062514:CDS |
CCCAAGAGAGTGGTTACTTT+GGG | 0.327741 | 5.1:-78778445 | MS.gene062514:CDS |
TGCTGCGCAAAGTATTCAAT+TGG | 0.331118 | 5.1:-78778886 | MS.gene062514:CDS |
AATACTTCTTCCACAATTGC+TGG | 0.343408 | 5.1:+78779139 | None:intergenic |
TCCTTGTCAACAATTGTTGA+TGG | 0.368042 | 5.1:+78778380 | None:intergenic |
AACGTCCTTAGTGCTAATTT+GGG | 0.374832 | 5.1:-78779109 | MS.gene062514:CDS |
TGGTGCTGCTGCATTAGTTT+TGG | 0.381346 | 5.1:-78776838 | MS.gene062514:CDS |
CCAAGAGCAGCTTGTCTAGC+AGG | 0.397023 | 5.1:+78779079 | None:intergenic |
TTGTGGAAGAAGTATTCTTT+GGG | 0.400326 | 5.1:-78779132 | MS.gene062514:CDS |
TGCACAGATGTTTGCATCGT+TGG | 0.404964 | 5.1:-78779358 | MS.gene062514:intron |
TGTCTATAAGGATGTAGGTA+TGG | 0.406710 | 5.1:-78778647 | MS.gene062514:CDS |
GAGAGAAGGCATTGAAGCTT+GGG | 0.409803 | 5.1:-78776809 | MS.gene062514:CDS |
TGGTTTGTGGGATGTCTATA+AGG | 0.412478 | 5.1:-78778659 | MS.gene062514:CDS |
GTTAACAAAGTTTGTGCGTC+AGG | 0.413289 | 5.1:-78779022 | MS.gene062514:CDS |
CTTGCTTCTGCCAGGTACTT+AGG | 0.414540 | 5.1:+78778813 | None:intergenic |
ATCACTCCGGTTGAAGTCTC+TGG | 0.417791 | 5.1:-78778416 | MS.gene062514:CDS |
CCTGCTAGACAAGCTGCTCT+TGG | 0.430204 | 5.1:-78779079 | MS.gene062514:CDS |
GTATCATTGGGCCATCCTCT+TGG | 0.431528 | 5.1:-78775304 | MS.gene062514:CDS |
TGAAATTAATGAAGCCTTTG+CGG | 0.433981 | 5.1:-78776536 | MS.gene062514:intron |
GAAACTTCTTGGACTAGATT+CGG | 0.439347 | 5.1:-78776413 | MS.gene062514:intron |
GGAGCTGTTGTAAATAACTC+TGG | 0.441062 | 5.1:+78776622 | None:intergenic |
GCCCAAGAGAGTGGTTACTT+TGG | 0.441646 | 5.1:-78778446 | MS.gene062514:CDS |
CCCAAAGCTATTGCCAATGC+AGG | 0.447182 | 5.1:-78776586 | MS.gene062514:CDS |
CAAACTTCGACCAAGCTTCA+AGG | 0.448532 | 5.1:-78777488 | MS.gene062514:CDS |
TGGATATGCTGATGCTGCTC+AGG | 0.450989 | 5.1:-78776763 | MS.gene062514:intron |
AGCTATTGCCAATGCAGGGC+TGG | 0.451948 | 5.1:-78776581 | MS.gene062514:CDS |
ACCCAAAGTAACCACTCTCT+TGG | 0.466065 | 5.1:+78778444 | None:intergenic |
CGTTGTTGTGGCCGGTGGTA+TGG | 0.469342 | 5.1:-78778853 | MS.gene062514:CDS |
CCCAAAGTAACCACTCTCTT+GGG | 0.471983 | 5.1:+78778445 | None:intergenic |
GGACACGATTCACTAGTTGA+TGG | 0.472023 | 5.1:-78778694 | MS.gene062514:CDS |
GGAGAGAAGGCATTGAAGCT+TGG | 0.472796 | 5.1:-78776810 | MS.gene062514:CDS |
ATATTGACCTTGCTTCTGCC+AGG | 0.474178 | 5.1:+78778805 | None:intergenic |
CCGGCAATGCTTCCAGCATA+AGG | 0.477086 | 5.1:-78777444 | MS.gene062514:intron |
TGGTCGAAGTTTGCGTAACT+TGG | 0.477342 | 5.1:+78777498 | None:intergenic |
TCTGTACCTGCCACCAAGCT+AGG | 0.481327 | 5.1:-78779292 | MS.gene062514:CDS |
TGAAGTCTCCAGCCCTGCAT+TGG | 0.486165 | 5.1:+78776573 | None:intergenic |
GTTGACAAGGACGAGGGCCT+AGG | 0.486835 | 5.1:-78778368 | MS.gene062514:CDS |
ACAAGATATCAACCTTATGC+TGG | 0.493081 | 5.1:+78777432 | None:intergenic |
GTCTATAAGGATGTAGGTAT+GGG | 0.493294 | 5.1:-78778646 | MS.gene062514:CDS |
CGGTTGAAGTCTCTGGTGGA+AGG | 0.493762 | 5.1:-78778409 | MS.gene062514:CDS |
CTTCCACCAGAGACTTCAAC+CGG | 0.493952 | 5.1:+78778410 | None:intergenic |
GGTCTTCTCTTGTTATCGAA+TGG | 0.499232 | 5.1:+78778596 | None:intergenic |
TTCAGGAAAGGATCCCGCCT+TGG | 0.504376 | 5.1:-78778715 | MS.gene062514:intron |
AGACAAGCTGCTCTTGGAGC+AGG | 0.505123 | 5.1:-78779073 | MS.gene062514:CDS |
CGACCAAGCTTCAAGGAGAC+TGG | 0.505206 | 5.1:-78777481 | MS.gene062514:CDS |
CCTCCAGTCTCCTTGAAGCT+TGG | 0.506596 | 5.1:+78777478 | None:intergenic |
CTAGGCTCGATAGCTATTGA+AGG | 0.507513 | 5.1:-78779274 | MS.gene062514:intron |
GGTGTTTGCAACGGAGGAGG+TGG | 0.510695 | 5.1:-78774757 | MS.gene062514:CDS |
AAGAGAGTGGTTACTTTGGG+TGG | 0.510955 | 5.1:-78778442 | MS.gene062514:CDS |
GCTTTGGGGATGGCAATGGC+TGG | 0.511880 | 5.1:+78776601 | None:intergenic |
TAGTGAATCGTGTCCAAGGC+GGG | 0.514939 | 5.1:+78778702 | None:intergenic |
TGGTGTTGCACGTACACCAA+TGG | 0.516183 | 5.1:-78779338 | MS.gene062514:CDS |
TTGCAGTGGTGCTCGTATCC+TGG | 0.516892 | 5.1:-78775281 | MS.gene062514:CDS |
GACACGATTCACTAGTTGAT+GGG | 0.517196 | 5.1:-78778693 | MS.gene062514:CDS |
AATAGCTATCGAGCCTAGCT+TGG | 0.518026 | 5.1:+78779279 | None:intergenic |
TTTGGGCGATTACCTTTCCT+AGG | 0.523656 | 5.1:+78778351 | None:intergenic |
GGCCATCCTCTTGGTTGCAG+TGG | 0.525412 | 5.1:-78775295 | MS.gene062514:CDS |
CAATGTTGATCCAGCAATTG+TGG | 0.526777 | 5.1:-78779149 | MS.gene062514:CDS |
GCTGCGCAAAGTATTCAATT+GGG | 0.527113 | 5.1:-78778885 | MS.gene062514:CDS |
TGGTGCATCTGCCCTTGTTG+TGG | 0.528344 | 5.1:-78774737 | MS.gene062514:CDS |
GATGTTGAAAGATGGTTTGT+GGG | 0.529197 | 5.1:-78778671 | MS.gene062514:CDS |
GGATGTTGAAAGATGGTTTG+TGG | 0.529632 | 5.1:-78778672 | MS.gene062514:CDS |
CACAATTGCTGGATCAACAT+TGG | 0.530049 | 5.1:+78779150 | None:intergenic |
ACATGGTGGAGCTGTATCAT+TGG | 0.532197 | 5.1:-78775317 | MS.gene062514:CDS |
ATATGTAGCTGCTCTTAAAA+GGG | 0.533700 | 5.1:-78779173 | MS.gene062514:intron |
TTTCCATCGATCAATGGCTC+CGG | 0.534726 | 5.1:-78779806 | None:intergenic |
GTTGAAGTCTCTGGTGGAAG+GGG | 0.537975 | 5.1:-78778407 | MS.gene062514:CDS |
TGGGATGTCTATAAGGATGT+AGG | 0.541044 | 5.1:-78778652 | MS.gene062514:CDS |
GCCATTAATTCCTACCGCAA+AGG | 0.542812 | 5.1:+78776522 | None:intergenic |
CTTTGGGTGGGAAATCACTC+CGG | 0.551515 | 5.1:-78778429 | MS.gene062514:CDS |
GGTTGAAGTCTCTGGTGGAA+GGG | 0.553470 | 5.1:-78778408 | MS.gene062514:CDS |
GGTGTTGCACGTACACCAAT+GGG | 0.554411 | 5.1:-78779337 | MS.gene062514:CDS |
CACCACTGCAACCAAGAGGA+TGG | 0.555857 | 5.1:+78775293 | None:intergenic |
GTTTGTGCGTCAGGAATGAA+AGG | 0.559395 | 5.1:-78779013 | MS.gene062514:intron |
GGTGGTGTTTGCAACGGAGG+AGG | 0.560817 | 5.1:-78774760 | MS.gene062514:CDS |
GTTGATGGGATGTTGAAAGA+TGG | 0.562395 | 5.1:-78778679 | MS.gene062514:CDS |
AATAGCTTTGGGGATGGCAA+TGG | 0.565250 | 5.1:+78776597 | None:intergenic |
CATGGTGGAGCTGTATCATT+GGG | 0.570697 | 5.1:-78775316 | MS.gene062514:CDS |
CAGGCAAAAGTAAATGTACA+TGG | 0.572291 | 5.1:-78775334 | MS.gene062514:CDS |
CAACTAGTGAATCGTGTCCA+AGG | 0.573234 | 5.1:+78778698 | None:intergenic |
ATAAATGACGTTGTTGTGGC+CGG | 0.573486 | 5.1:-78778861 | MS.gene062514:CDS |
AATGGAAAGTACGGTGTAGG+TGG | 0.576859 | 5.1:-78774778 | MS.gene062514:CDS |
GAGCTGTTGTAAATAACTCT+GGG | 0.576934 | 5.1:+78776623 | None:intergenic |
GGAATTTCTGCCCAAGAGAG+TGG | 0.577950 | 5.1:-78778455 | MS.gene062514:CDS |
AGAGAGTGGTTACTTTGGGT+GGG | 0.579880 | 5.1:-78778441 | MS.gene062514:CDS |
ATGACCTCTAGGCTGTATAG+AGG | 0.580039 | 5.1:+78779768 | None:intergenic |
AGCTATCGAGCCTAGCTTGG+TGG | 0.583813 | 5.1:+78779282 | None:intergenic |
GAGGAGTCTGAAGATGCTGC+CGG | 0.592288 | 5.1:+78779787 | None:intergenic |
TTCACAGGAGCTCCACAACA+AGG | 0.592999 | 5.1:+78774725 | None:intergenic |
ATCGAGCCTAGCTTGGTGGC+AGG | 0.593460 | 5.1:+78779286 | None:intergenic |
CTGCATTGGCAATAGCTTTG+GGG | 0.597611 | 5.1:+78776587 | None:intergenic |
GTAGGTGGTGTTTGCAACGG+AGG | 0.598679 | 5.1:-78774763 | MS.gene062514:CDS |
CTTGCCCCAAATTAGCACTA+AGG | 0.599342 | 5.1:+78779104 | None:intergenic |
ACTCCGGTTGAAGTCTCTGG+TGG | 0.599869 | 5.1:-78778413 | MS.gene062514:CDS |
CAAGGACGAGGGCCTAGGAA+AGG | 0.607320 | 5.1:-78778363 | MS.gene062514:intron |
GTACCAAGAAACCCACCCAT+TGG | 0.608246 | 5.1:+78779322 | None:intergenic |
AACAATTGTTGACAAGGACG+AGG | 0.609353 | 5.1:-78778375 | MS.gene062514:CDS |
ATTGGCAATAGCTTTGGGGA+TGG | 0.613894 | 5.1:+78776591 | None:intergenic |
GTCTAGTGTACCTAAGTACC+TGG | 0.616573 | 5.1:-78778823 | MS.gene062514:CDS |
ACTGGAGGCTCTGTTACTGC+CGG | 0.620647 | 5.1:-78777463 | MS.gene062514:CDS |
CTAAGTACCTGGCAGAAGCA+AGG | 0.621882 | 5.1:-78778812 | MS.gene062514:intron |
CCAAAGCTATTGCCAATGCA+GGG | 0.624619 | 5.1:-78776585 | MS.gene062514:CDS |
GGTGTAGGTGGTGTTTGCAA+CGG | 0.625440 | 5.1:-78774766 | MS.gene062514:CDS |
TTCGATAACAAGAGAAGACC+AGG | 0.630164 | 5.1:-78778593 | MS.gene062514:intron |
ACCATCAACAATTGTTGACA+AGG | 0.631110 | 5.1:-78778381 | MS.gene062514:CDS |
TTGCACGTACACCAATGGGT+GGG | 0.631141 | 5.1:-78779333 | MS.gene062514:CDS |
GGGCATAAATGACGTTGTTG+TGG | 0.634678 | 5.1:-78778865 | MS.gene062514:CDS |
GTTGCACGTACACCAATGGG+TGG | 0.635819 | 5.1:-78779334 | MS.gene062514:CDS |
AATGACGTTGTTGTGGCCGG+TGG | 0.650291 | 5.1:-78778858 | MS.gene062514:CDS |
CGAGCACCACTGCAACCAAG+AGG | 0.657848 | 5.1:+78775289 | None:intergenic |
ACGTCCTTAGTGCTAATTTG+GGG | 0.662324 | 5.1:-78779108 | MS.gene062514:CDS |
CCAAGCTTCAAGGAGACTGG+AGG | 0.663840 | 5.1:-78777478 | MS.gene062514:CDS |
TCACAGGAGCTCCACAACAA+GGG | 0.671465 | 5.1:+78774726 | None:intergenic |
ACAATTGTTGACAAGGACGA+GGG | 0.682480 | 5.1:-78778374 | MS.gene062514:CDS |
GCAAAAGTAAATGTACATGG+TGG | 0.690007 | 5.1:-78775331 | MS.gene062514:CDS |
CTAGTGAATCGTGTCCAAGG+CGG | 0.721205 | 5.1:+78778701 | None:intergenic |
GACTCCTCTATACAGCCTAG+AGG | 0.751586 | 5.1:-78779772 | MS.gene062514:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATAAATTTTAAATATTT+GGG | + | chr5.1:78776290-78776309 | None:intergenic | 0.0% |
!!! | TTTAATAAATTTTAAATATT+TGG | + | chr5.1:78776291-78776310 | None:intergenic | 0.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr5.1:78778325-78778344 | None:intergenic | 100.0% |
!! | AATAGTTATTCATTAGTAAA+AGG | + | chr5.1:78779116-78779135 | None:intergenic | 15.0% |
!! | GAAAAAAGATATCAATATAT+TGG | + | chr5.1:78776976-78776995 | None:intergenic | 15.0% |
!!! | ATAACTTTTTTATACATCTA+TGG | - | chr5.1:78776880-78776899 | MS.gene062514:intron | 15.0% |
!!! | TTATATTTTGATAAACCTAT+TGG | - | chr5.1:78777364-78777383 | MS.gene062514:intron | 15.0% |
!!! | TTTTTTGGTAATAAAATACA+TGG | - | chr5.1:78777188-78777207 | MS.gene062514:intron | 15.0% |
!! | AAAAATTCTTTAACACTATC+AGG | - | chr5.1:78776426-78776445 | MS.gene062514:CDS | 20.0% |
!! | AAACAAAATAATTCATGATG+AGG | + | chr5.1:78778994-78779013 | None:intergenic | 20.0% |
!! | AATATAATGTCCTCAAAATA+AGG | - | chr5.1:78776479-78776498 | MS.gene062514:intron | 20.0% |
!! | AATTCTGTTTGTAATAAAGT+GGG | + | chr5.1:78778909-78778928 | None:intergenic | 20.0% |
!! | ATAAAAAAGTTATGCAGAAA+CGG | + | chr5.1:78776873-78776892 | None:intergenic | 20.0% |
!! | ATATAATGTCCTCAAAATAA+GGG | - | chr5.1:78776480-78776499 | MS.gene062514:intron | 20.0% |
!! | ATGATATACATAAGTTCATA+TGG | - | chr5.1:78779581-78779600 | MS.gene062514:intron | 20.0% |
!! | TAACATGCCATAAATAATTA+AGG | - | chr5.1:78778454-78778473 | MS.gene062514:CDS | 20.0% |
!! | TAATTCTGTTTGTAATAAAG+TGG | + | chr5.1:78778910-78778929 | None:intergenic | 20.0% |
!! | TGCAAAATAATAGTTATTTG+AGG | + | chr5.1:78779167-78779186 | None:intergenic | 20.0% |
!! | TGTAGTTTCTCAAAATTTAT+TGG | + | chr5.1:78778764-78778783 | None:intergenic | 20.0% |
!! | TTATGTAGTTAAACTTAACA+AGG | + | chr5.1:78778857-78778876 | None:intergenic | 20.0% |
!! | TTTAGACTAATTGAATCAAA+AGG | + | chr5.1:78779691-78779710 | None:intergenic | 20.0% |
!!! | AAAAGCTATTATTTTTCATC+AGG | - | chr5.1:78779064-78779083 | MS.gene062514:CDS | 20.0% |
!!! | AGTTTATCAATTTTAGTGAA+TGG | - | chr5.1:78777322-78777341 | MS.gene062514:intron | 20.0% |
!!! | ATATTTGTATTTTGCATGTT+AGG | - | chr5.1:78778876-78778895 | MS.gene062514:CDS | 20.0% |
!!! | ATCTGATTCATTTGAATTTT+TGG | - | chr5.1:78774806-78774825 | MS.gene062514:intron | 20.0% |
!!! | ATTTGTAGTGTTTTATATGT+TGG | - | chr5.1:78777833-78777852 | MS.gene062514:intron | 20.0% |
!!! | ATTTTGAGGACATTATATTA+AGG | + | chr5.1:78776478-78776497 | None:intergenic | 20.0% |
!!! | GAAAAATAATAGCTTTTGTT+TGG | + | chr5.1:78779061-78779080 | None:intergenic | 20.0% |
!!! | GGATATTTTTGTCAATTTTT+TGG | - | chr5.1:78777173-78777192 | MS.gene062514:intron | 20.0% |
!!! | TAGTAGTAATCAAATTTTGA+TGG | + | chr5.1:78776506-78776525 | None:intergenic | 20.0% |
!!! | TATTAAACTTGTTCATTCAT+CGG | + | chr5.1:78775581-78775600 | None:intergenic | 20.0% |
!!! | TCAAATAACTATTATTTTGC+AGG | - | chr5.1:78779166-78779185 | MS.gene062514:CDS | 20.0% |
!!! | TCTTTGAAAAACAATATGAA+GGG | + | chr5.1:78778626-78778645 | None:intergenic | 20.0% |
!!! | TTCATTTTCATTAAAAACCA+AGG | + | chr5.1:78777641-78777660 | None:intergenic | 20.0% |
!!! | TTTTGTTTGGATCAATATAT+TGG | + | chr5.1:78779048-78779067 | None:intergenic | 20.0% |
! | AAATGAATCAGATAAATGCT+AGG | + | chr5.1:78774799-78774818 | None:intergenic | 25.0% |
! | AGAAGATCAACTAAAATGAA+AGG | + | chr5.1:78775131-78775150 | None:intergenic | 25.0% |
! | AGCTCTTAAATTCTGTTTAA+TGG | - | chr5.1:78779383-78779402 | MS.gene062514:intron | 25.0% |
! | ATGAGAATATTGGTATTACA+TGG | - | chr5.1:78776771-78776790 | MS.gene062514:CDS | 25.0% |
! | CAGAAATCAATTAAAACTCA+TGG | + | chr5.1:78778059-78778078 | None:intergenic | 25.0% |
! | GTCTAAACATTATTACATAC+AGG | - | chr5.1:78779704-78779723 | MS.gene062514:intron | 25.0% |
! | TAAACTTACCTGCTTATTAT+TGG | - | chr5.1:78776689-78776708 | MS.gene062514:intron | 25.0% |
! | TCAAAATTAAACTCTTCTCA+TGG | - | chr5.1:78775101-78775120 | MS.gene062514:intron | 25.0% |
! | TGAGAATATTGGTATTACAT+GGG | - | chr5.1:78776772-78776791 | MS.gene062514:CDS | 25.0% |
! | TGATTCAATGCTAAAATTTC+AGG | - | chr5.1:78775787-78775806 | MS.gene062514:intron | 25.0% |
!! | AGTTCATATGGATTTTTAAC+TGG | - | chr5.1:78779593-78779612 | MS.gene062514:intron | 25.0% |
!! | ATTTCTGTTCAAATTGGTTT+CGG | - | chr5.1:78775962-78775981 | MS.gene062514:intron | 25.0% |
!! | CTCTTTGAAAAACAATATGA+AGG | + | chr5.1:78778627-78778646 | None:intergenic | 25.0% |
!! | GTAAGTTTAAGATTTACATG+TGG | + | chr5.1:78776678-78776697 | None:intergenic | 25.0% |
!! | TCTAACTGACTTAATGATAT+AGG | + | chr5.1:78777491-78777510 | None:intergenic | 25.0% |
!! | TTGTTGTTAGCTGATATTAT+AGG | + | chr5.1:78778429-78778448 | None:intergenic | 25.0% |
!! | TTTAATTGATTTCTGTCTGT+AGG | - | chr5.1:78778064-78778083 | MS.gene062514:intron | 25.0% |
!!! | AATGTTATTGTTGATAGTGA+TGG | - | chr5.1:78777661-78777680 | MS.gene062514:intron | 25.0% |
AAATAATTCATGATGAGGAG+TGG | + | chr5.1:78778989-78779008 | None:intergenic | 30.0% | |
AAGCAGAAAAATGGAAAGTA+CGG | - | chr5.1:78779732-78779751 | MS.gene062514:intron | 30.0% | |
AATTAAACTCTTCTCATGGT+AGG | - | chr5.1:78775105-78775124 | MS.gene062514:intron | 30.0% | |
AGCATCTTAAAACCTTTGTA+TGG | + | chr5.1:78778830-78778849 | None:intergenic | 30.0% | |
ATATGTAGCTGCTCTTAAAA+GGG | - | chr5.1:78775346-78775365 | MS.gene062514:intron | 30.0% | |
ATTTGTTCATTTCATCCAGT+AGG | - | chr5.1:78774840-78774859 | MS.gene062514:intron | 30.0% | |
CAATGCTAAAATTTCAGGAA+AGG | - | chr5.1:78775792-78775811 | MS.gene062514:intron | 30.0% | |
CATGTAAGCACATAAACTAA+TGG | + | chr5.1:78777573-78777592 | None:intergenic | 30.0% | |
CTAGTACTGCACTAAAATAA+TGG | + | chr5.1:78776716-78776735 | None:intergenic | 30.0% | |
GAAATTGCGTAATAACTACA+TGG | - | chr5.1:78777292-78777311 | MS.gene062514:intron | 30.0% | |
GAAGTTACAAAACTAGCAAA+TGG | + | chr5.1:78776911-78776930 | None:intergenic | 30.0% | |
GAATAAACATGCTGTTGTAA+AGG | - | chr5.1:78774934-78774953 | MS.gene062514:intron | 30.0% | |
GCAAAAAATTGTCTACATGA+CGG | + | chr5.1:78777469-78777488 | None:intergenic | 30.0% | |
GCTGATGTAAGAGAATTTAT+TGG | + | chr5.1:78776589-78776608 | None:intergenic | 30.0% | |
GGAGGTTCCTTAATTATTTA+TGG | + | chr5.1:78778464-78778483 | None:intergenic | 30.0% | |
GTAACTGTGTTTCATTCTTT+GGG | + | chr5.1:78778383-78778402 | None:intergenic | 30.0% | |
GTAGTTAAACTTAACAAGGA+AGG | + | chr5.1:78778853-78778872 | None:intergenic | 30.0% | |
TCTATGTATATGTATCTTGC+AGG | + | chr5.1:78776239-78776258 | None:intergenic | 30.0% | |
TGAAATTAATGAAGCCTTTG+CGG | - | chr5.1:78777983-78778002 | MS.gene062514:intron | 30.0% | |
TGAATATCAATATGAGCTGA+AGG | + | chr5.1:78777810-78777829 | None:intergenic | 30.0% | |
TGGATCAATATATTGGTCAA+TGG | + | chr5.1:78779041-78779060 | None:intergenic | 30.0% | |
TGTAACTGTGTTTCATTCTT+TGG | + | chr5.1:78778384-78778403 | None:intergenic | 30.0% | |
TGTAGTTATTACGCAATTTC+TGG | + | chr5.1:78777292-78777311 | None:intergenic | 30.0% | |
TGTGTTTGAAGAAGAAATGT+CGG | - | chr5.1:78779349-78779368 | MS.gene062514:CDS | 30.0% | |
TTAGAGATTGTCACTCATAA+TGG | + | chr5.1:78778542-78778561 | None:intergenic | 30.0% | |
TTCAATGTCAGCTAATGTAA+GGG | - | chr5.1:78776811-78776830 | MS.gene062514:CDS | 30.0% | |
! | ATAGAAGTTTAGAGCCATTA+AGG | + | chr5.1:78778305-78778324 | None:intergenic | 30.0% |
! | ATTGCACTATGTTTTCCAAT+AGG | + | chr5.1:78777382-78777401 | None:intergenic | 30.0% |
! | CTCTTGTTATCCAAAAAAGA+GGG | + | chr5.1:78778352-78778371 | None:intergenic | 30.0% |
! | GGATTGATTTCTGTTCAAAT+TGG | - | chr5.1:78775956-78775975 | MS.gene062514:intron | 30.0% |
! | TCTTGTTATCCAAAAAAGAG+GGG | + | chr5.1:78778351-78778370 | None:intergenic | 30.0% |
! | TCTTTAATGATTTTGCCTAC+TGG | + | chr5.1:78774858-78774877 | None:intergenic | 30.0% |
! | TTTTCTCAGCATGAGAATAT+TGG | - | chr5.1:78776761-78776780 | MS.gene062514:intron | 30.0% |
!! | AAGAGTTTAATTTTGACACG+CGG | + | chr5.1:78775097-78775116 | None:intergenic | 30.0% |
!! | AGCAATTAGGTGTTATTATG+TGG | + | chr5.1:78776544-78776563 | None:intergenic | 30.0% |
!! | ATAATGGACCAATAATAAGC+AGG | + | chr5.1:78776700-78776719 | None:intergenic | 30.0% |
!! | ATTGTGGAAGAAGTATTCTT+TGG | - | chr5.1:78775386-78775405 | MS.gene062514:intron | 30.0% |
!! | TGCCATGTTTCAAGTTATTT+GGG | + | chr5.1:78776188-78776207 | None:intergenic | 30.0% |
!! | TTGCCATGTTTCAAGTTATT+TGG | + | chr5.1:78776189-78776208 | None:intergenic | 30.0% |
!! | TTGTGGAAGAAGTATTCTTT+GGG | - | chr5.1:78775387-78775406 | MS.gene062514:intron | 30.0% |
!! | TTTAATTTTGACATGAGCCT+TGG | - | chr5.1:78777621-78777640 | MS.gene062514:intron | 30.0% |
!!! | ATGTCTGTGTTTTTTTGTAC+AGG | - | chr5.1:78776012-78776031 | MS.gene062514:intron | 30.0% |
!!! | CTCTTTTTTGGATAACAAGA+GGG | - | chr5.1:78778351-78778370 | MS.gene062514:intron | 30.0% |
AACGTCCTTAGTGCTAATTT+GGG | - | chr5.1:78775410-78775429 | MS.gene062514:intron | 35.0% | |
AATACTTCTTCCACAATTGC+TGG | + | chr5.1:78775383-78775402 | None:intergenic | 35.0% | |
ACAAGATATCAACCTTATGC+TGG | + | chr5.1:78777090-78777109 | None:intergenic | 35.0% | |
ACACAGTTACAACTTAACCT+AGG | - | chr5.1:78778393-78778412 | MS.gene062514:CDS | 35.0% | |
ACCATCAACAATTGTTGACA+AGG | - | chr5.1:78776138-78776157 | MS.gene062514:intron | 35.0% | |
AGACACATAGGAAAAGAATG+AGG | + | chr5.1:78777129-78777148 | None:intergenic | 35.0% | |
ATCATGTGAAAGTTGCAATC+TGG | - | chr5.1:78778147-78778166 | MS.gene062514:intron | 35.0% | |
CAACAATCGCAATCATTCAT+AGG | + | chr5.1:78775050-78775069 | None:intergenic | 35.0% | |
CAACTTTCACATGATGACAA+GGG | + | chr5.1:78778142-78778161 | None:intergenic | 35.0% | |
CAATCTTCAAGACACTCAAT+CGG | + | chr5.1:78778197-78778216 | None:intergenic | 35.0% | |
CAGGCAAAAGTAAATGTACA+TGG | - | chr5.1:78779185-78779204 | MS.gene062514:intron | 35.0% | |
CTTCAATGTCAGCTAATGTA+AGG | - | chr5.1:78776810-78776829 | MS.gene062514:CDS | 35.0% | |
CTTGCAAATCAGAAACTTCT+TGG | - | chr5.1:78778095-78778114 | MS.gene062514:intron | 35.0% | |
CTTGCATCTGATGAGAAATT+AGG | - | chr5.1:78778934-78778953 | MS.gene062514:intron | 35.0% | |
GAAATCAATCCCAAAATACC+TGG | + | chr5.1:78775947-78775966 | None:intergenic | 35.0% | |
GAGCTGTTGTAAATAACTCT+GGG | + | chr5.1:78777899-78777918 | None:intergenic | 35.0% | |
GATATGTAGCTGCTCTTAAA+AGG | - | chr5.1:78775345-78775364 | MS.gene062514:intron | 35.0% | |
GCAAAAGTAAATGTACATGG+TGG | - | chr5.1:78779188-78779207 | MS.gene062514:intron | 35.0% | |
GCTAATGTAAGGGATTAATC+AGG | - | chr5.1:78776821-78776840 | MS.gene062514:CDS | 35.0% | |
GTCTATAAGGATGTAGGTAT+GGG | - | chr5.1:78775873-78775892 | MS.gene062514:intron | 35.0% | |
GTTTCTCCAAACCTAAGTTT+GGG | - | chr5.1:78779010-78779029 | MS.gene062514:intron | 35.0% | |
TATTGCTAGATTGCTTGAGA+TGG | + | chr5.1:78778574-78778593 | None:intergenic | 35.0% | |
TCATTCTTGTGTGCATATGA+TGG | - | chr5.1:78776212-78776231 | MS.gene062514:intron | 35.0% | |
TCATTTGATGTGATCTGTAC+AGG | - | chr5.1:78777872-78777891 | MS.gene062514:intron | 35.0% | |
TCCTTGTCAACAATTGTTGA+TGG | + | chr5.1:78776142-78776161 | None:intergenic | 35.0% | |
TCTGCTTCTCTGTTTGTATT+TGG | - | chr5.1:78777152-78777171 | MS.gene062514:intron | 35.0% | |
TCTTAAAACCTTTGTATGGC+AGG | + | chr5.1:78778826-78778845 | None:intergenic | 35.0% | |
TGAGAGTTGAGTGATTTAGT+GGG | - | chr5.1:78777253-78777272 | MS.gene062514:intron | 35.0% | |
TGTCTATAAGGATGTAGGTA+TGG | - | chr5.1:78775872-78775891 | MS.gene062514:intron | 35.0% | |
TGTTTCTCCAAACCTAAGTT+TGG | - | chr5.1:78779009-78779028 | MS.gene062514:intron | 35.0% | |
TTGAGAGTTGAGTGATTTAG+TGG | - | chr5.1:78777252-78777271 | MS.gene062514:intron | 35.0% | |
TTGCGTAATAACTACATGGA+TGG | - | chr5.1:78777296-78777315 | MS.gene062514:intron | 35.0% | |
TTGTTATCCAAAAAAGAGGG+GGG | + | chr5.1:78778349-78778368 | None:intergenic | 35.0% | |
TTTCTCCAAACCTAAGTTTG+GGG | - | chr5.1:78779011-78779030 | MS.gene062514:intron | 35.0% | |
! | AAAAATGGAAAGTACGGTGT+AGG | - | chr5.1:78779738-78779757 | MS.gene062514:intron | 35.0% |
! | AAACAATATGAAGGGAGTGT+TGG | + | chr5.1:78778618-78778637 | None:intergenic | 35.0% |
! | AAGAGAAGACCAGGTATTTT+GGG | - | chr5.1:78775935-78775954 | MS.gene062514:intron | 35.0% |
! | AGATTGTCACTCATAATGGA+AGG | + | chr5.1:78778538-78778557 | None:intergenic | 35.0% |
! | CCTCTTGTTATCCAAAAAAG+AGG | + | chr5.1:78778353-78778372 | None:intergenic | 35.0% |
! | CTTGTTATCCAAAAAAGAGG+GGG | + | chr5.1:78778350-78778369 | None:intergenic | 35.0% |
! | GAAACTTCTTGGACTAGATT+CGG | - | chr5.1:78778106-78778125 | MS.gene062514:intron | 35.0% |
! | GATGTTGAAAGATGGTTTGT+GGG | - | chr5.1:78775848-78775867 | MS.gene062514:intron | 35.0% |
! | TAAAAATTGGCTCATGATCG+TGG | + | chr5.1:78778695-78778714 | None:intergenic | 35.0% |
! | TAGATTGCTTGAGATGGATT+GGG | + | chr5.1:78778568-78778587 | None:intergenic | 35.0% |
! | TGGTCTTGAACATTATTCAC+TGG | - | chr5.1:78777208-78777227 | MS.gene062514:intron | 35.0% |
!! | AAAGTTTGGTAATGACCTCT+AGG | + | chr5.1:78774765-78774784 | None:intergenic | 35.0% |
!!! | CCTCTTTTTTGGATAACAAG+AGG | - | chr5.1:78778350-78778369 | MS.gene062514:intron | 35.0% |
!!! | TTTTGATGGCCCTTATTTTG+AGG | + | chr5.1:78776492-78776511 | None:intergenic | 35.0% |
AAACCTTTGTATGGCAGGAT+CGG | + | chr5.1:78778821-78778840 | None:intergenic | 40.0% | |
AACAATTGTTGACAAGGACG+AGG | - | chr5.1:78776144-78776163 | MS.gene062514:intron | 40.0% | |
ACAATTGTTGACAAGGACGA+GGG | - | chr5.1:78776145-78776164 | MS.gene062514:intron | 40.0% | |
ACGTCCTTAGTGCTAATTTG+GGG | - | chr5.1:78775411-78775430 | MS.gene062514:intron | 40.0% | |
AGAAGCAGAGAAAGACACAT+AGG | + | chr5.1:78777141-78777160 | None:intergenic | 40.0% | |
AGGCAAGCACAACAAAAGTT+TGG | + | chr5.1:78774779-78774798 | None:intergenic | 40.0% | |
ATAAATGACGTTGTTGTGGC+CGG | - | chr5.1:78775658-78775677 | MS.gene062514:intron | 40.0% | |
ATTAATGAAGCCTTTGCGGT+AGG | - | chr5.1:78777987-78778006 | MS.gene062514:intron | 40.0% | |
CAATGTTGATCCAGCAATTG+TGG | - | chr5.1:78775370-78775389 | MS.gene062514:intron | 40.0% | |
CACAATTGCTGGATCAACAT+TGG | + | chr5.1:78775372-78775391 | None:intergenic | 40.0% | |
CAGGTCATTGCAAAAATCAC+TGG | - | chr5.1:78777736-78777755 | MS.gene062514:intron | 40.0% | |
CATCAAACTGGGATATCGAA+AGG | + | chr5.1:78776998-78777017 | None:intergenic | 40.0% | |
CGCCCAAATAACTTGAAACA+TGG | - | chr5.1:78776183-78776202 | MS.gene062514:intron | 40.0% | |
CTAGATTGCTTGAGATGGAT+TGG | + | chr5.1:78778569-78778588 | None:intergenic | 40.0% | |
GAACGTCCTTAGTGCTAATT+TGG | - | chr5.1:78775409-78775428 | MS.gene062514:intron | 40.0% | |
GACACGATTCACTAGTTGAT+GGG | - | chr5.1:78775826-78775845 | MS.gene062514:intron | 40.0% | |
GAGAGTTGAGTGATTTAGTG+GGG | - | chr5.1:78777254-78777273 | MS.gene062514:intron | 40.0% | |
GCAACTTTCACATGATGACA+AGG | + | chr5.1:78778143-78778162 | None:intergenic | 40.0% | |
GCTAACACTTTCAAGAAGCA+CGG | - | chr5.1:78777430-78777449 | MS.gene062514:intron | 40.0% | |
GGAGCTGTTGTAAATAACTC+TGG | + | chr5.1:78777900-78777919 | None:intergenic | 40.0% | |
GGATGTTGAAAGATGGTTTG+TGG | - | chr5.1:78775847-78775866 | MS.gene062514:intron | 40.0% | |
GGATTAATCAGGACTAGGAT+TGG | - | chr5.1:78776832-78776851 | MS.gene062514:CDS | 40.0% | |
GTAAGGGATTAATCAGGACT+AGG | - | chr5.1:78776827-78776846 | MS.gene062514:CDS | 40.0% | |
GTCCACATTTACCTTCATTG+CGG | - | chr5.1:78778278-78778297 | MS.gene062514:intron | 40.0% | |
GTTAACAAAGTTTGTGCGTC+AGG | - | chr5.1:78775497-78775516 | MS.gene062514:intron | 40.0% | |
TAACTTGGCAGCATCAAACT+GGG | + | chr5.1:78777009-78777028 | None:intergenic | 40.0% | |
TGAAGATTGCATGCTGTTGT+AGG | - | chr5.1:78778208-78778227 | MS.gene062514:intron | 40.0% | |
TGGGATGTCTATAAGGATGT+AGG | - | chr5.1:78775867-78775886 | MS.gene062514:intron | 40.0% | |
TGTTATCCAAAAAAGAGGGG+GGG | + | chr5.1:78778348-78778367 | None:intergenic | 40.0% | |
TTCGATAACAAGAGAAGACC+AGG | - | chr5.1:78775926-78775945 | MS.gene062514:intron | 40.0% | |
! | AGACATGTTTTCCATACCAC+CGG | + | chr5.1:78775680-78775699 | None:intergenic | 40.0% |
! | CAAGAGAAGACCAGGTATTT+TGG | - | chr5.1:78775934-78775953 | MS.gene062514:intron | 40.0% |
! | CGTATCCTGGTAACACTTTT+GGG | - | chr5.1:78779251-78779270 | MS.gene062514:intron | 40.0% |
! | CTAACACTTTCAAGAAGCAC+GGG | - | chr5.1:78777431-78777450 | MS.gene062514:intron | 40.0% |
! | GCTGCGCAAAGTATTCAATT+GGG | - | chr5.1:78775634-78775653 | MS.gene062514:intron | 40.0% |
! | GGTCTTCTCTTGTTATCGAA+TGG | + | chr5.1:78775926-78775945 | None:intergenic | 40.0% |
! | GTATCCTGGTAACACTTTTG+GGG | - | chr5.1:78779252-78779271 | MS.gene062514:intron | 40.0% |
! | GTTGATGGGATGTTGAAAGA+TGG | - | chr5.1:78775840-78775859 | MS.gene062514:intron | 40.0% |
! | TATCCTGGTAACACTTTTGG+GGG | - | chr5.1:78779253-78779272 | MS.gene062514:intron | 40.0% |
! | TCGTATCCTGGTAACACTTT+TGG | - | chr5.1:78779250-78779269 | MS.gene062514:intron | 40.0% |
! | TGCTGCGCAAAGTATTCAAT+TGG | - | chr5.1:78775633-78775652 | MS.gene062514:intron | 40.0% |
! | TGGTTTGTGGGATGTCTATA+AGG | - | chr5.1:78775860-78775879 | MS.gene062514:intron | 40.0% |
!! | CAGGTACTGAAGCAGAAAAA+TGG | - | chr5.1:78779723-78779742 | MS.gene062514:intron | 40.0% |
AAACAAGTCTGCTGATGCCT+TGG | + | chr5.1:78778514-78778533 | None:intergenic | 45.0% | |
AATAGCTATCGAGCCTAGCT+TGG | + | chr5.1:78775243-78775262 | None:intergenic | 45.0% | |
ACCCAAAGTAACCACTCTCT+TGG | + | chr5.1:78776078-78776097 | None:intergenic | 45.0% | |
ACCTTCATTGCGGTCCTTAA+TGG | - | chr5.1:78778288-78778307 | MS.gene062514:intron | 45.0% | |
AGCCTGTAGTGCTTACATAG+GGG | + | chr5.1:78778741-78778760 | None:intergenic | 45.0% | |
ATATTGACCTTGCTTCTGCC+AGG | + | chr5.1:78775717-78775736 | None:intergenic | 45.0% | |
ATCGCATCCCATATTTGCCA+AGG | - | chr5.1:78778494-78778513 | MS.gene062514:intron | 45.0% | |
ATGACCTCTAGGCTGTATAG+AGG | + | chr5.1:78774754-78774773 | None:intergenic | 45.0% | |
ATTAGGAACCACGAGTTACG+AGG | - | chr5.1:78778951-78778970 | MS.gene062514:intron | 45.0% | |
CAAACTTCGACCAAGCTTCA+AGG | - | chr5.1:78777031-78777050 | MS.gene062514:intron | 45.0% | |
CAACTAGTGAATCGTGTCCA+AGG | + | chr5.1:78775824-78775843 | None:intergenic | 45.0% | |
CAGCTTAGCACAGAGCAATT+AGG | + | chr5.1:78776557-78776576 | None:intergenic | 45.0% | |
CCAAAGCTATTGCCAATGCA+GGG | - | chr5.1:78777934-78777953 | MS.gene062514:intron | 45.0% | |
CCCAAAGTAACCACTCTCTT+GGG | + | chr5.1:78776077-78776096 | None:intergenic | 45.0% | |
CTAGGCTCGATAGCTATTGA+AGG | - | chr5.1:78775245-78775264 | MS.gene062514:intron | 45.0% | |
CTTGCCCCAAATTAGCACTA+AGG | + | chr5.1:78775418-78775437 | None:intergenic | 45.0% | |
GACCGCAATGAAGGTAAATG+TGG | + | chr5.1:78778283-78778302 | None:intergenic | 45.0% | |
GAGCCTGTAGTGCTTACATA+GGG | + | chr5.1:78778742-78778761 | None:intergenic | 45.0% | |
GCCATTAATTCCTACCGCAA+AGG | + | chr5.1:78778000-78778019 | None:intergenic | 45.0% | |
GCCTTTGCGGTAGGAATTAA+TGG | - | chr5.1:78777996-78778015 | MS.gene062514:intron | 45.0% | |
GCTGATGCCTTGGCAAATAT+GGG | + | chr5.1:78778504-78778523 | None:intergenic | 45.0% | |
GGACACGATTCACTAGTTGA+TGG | - | chr5.1:78775825-78775844 | MS.gene062514:intron | 45.0% | |
GGGCATAAATGACGTTGTTG+TGG | - | chr5.1:78775654-78775673 | MS.gene062514:intron | 45.0% | |
GTAACTTGGCAGCATCAAAC+TGG | + | chr5.1:78777010-78777029 | None:intergenic | 45.0% | |
GTCTAGTGTACCTAAGTACC+TGG | - | chr5.1:78775696-78775715 | MS.gene062514:intron | 45.0% | |
GTTATCCAAAAAAGAGGGGG+GGG | + | chr5.1:78778347-78778366 | None:intergenic | 45.0% | |
GTTTGTGCGTCAGGAATGAA+AGG | - | chr5.1:78775506-78775525 | MS.gene062514:intron | 45.0% | |
TCATGATGAGGAGTGGTCAA+TGG | + | chr5.1:78778982-78779001 | None:intergenic | 45.0% | |
TGATTTCTGTCTGTAGGTCG+TGG | - | chr5.1:78778070-78778089 | MS.gene062514:intron | 45.0% | |
TGCACAGATGTTTGCATCGT+TGG | - | chr5.1:78775161-78775180 | MS.gene062514:intron | 45.0% | |
TGCTGATGCCTTGGCAAATA+TGG | + | chr5.1:78778505-78778524 | None:intergenic | 45.0% | |
TGCTTACATAGGGGAGCTTT+GGG | + | chr5.1:78778732-78778751 | None:intergenic | 45.0% | |
TGGTCGAAGTTTGCGTAACT+TGG | + | chr5.1:78777024-78777043 | None:intergenic | 45.0% | |
TTATAGGAGCGACTACTCCT+AGG | + | chr5.1:78778413-78778432 | None:intergenic | 45.0% | |
TTATCCAAAAAAGAGGGGGG+GGG | + | chr5.1:78778346-78778365 | None:intergenic | 45.0% | |
TTGGCAAATATGGGATGCGA+TGG | + | chr5.1:78778495-78778514 | None:intergenic | 45.0% | |
TTTGGGCGATTACCTTTCCT+AGG | + | chr5.1:78776171-78776190 | None:intergenic | 45.0% | |
! | AAGAGAGTGGTTACTTTGGG+TGG | - | chr5.1:78776077-78776096 | MS.gene062514:intron | 45.0% |
! | AATGGAAAGTACGGTGTAGG+TGG | - | chr5.1:78779741-78779760 | MS.gene062514:intron | 45.0% |
! | ACATGGTGGAGCTGTATCAT+TGG | - | chr5.1:78779202-78779221 | MS.gene062514:intron | 45.0% |
! | AGAGAGTGGTTACTTTGGGT+GGG | - | chr5.1:78776078-78776097 | MS.gene062514:intron | 45.0% |
! | CATGGTGGAGCTGTATCATT+GGG | - | chr5.1:78779203-78779222 | MS.gene062514:intron | 45.0% |
! | CCCAAGAGAGTGGTTACTTT+GGG | - | chr5.1:78776074-78776093 | MS.gene062514:intron | 45.0% |
! | CCTGCATTGGCAATAGCTTT+GGG | + | chr5.1:78777936-78777955 | None:intergenic | 45.0% |
! | CTGCATTGGCAATAGCTTTG+GGG | + | chr5.1:78777935-78777954 | None:intergenic | 45.0% |
! | GGATTTTGTTGCACTTACGC+AGG | + | chr5.1:78776457-78776476 | None:intergenic | 45.0% |
!! | AATAGCTTTGGGGATGGCAA+TGG | + | chr5.1:78777925-78777944 | None:intergenic | 45.0% |
!! | AGTTTTGGTGAGTGGAGAGA+AGG | - | chr5.1:78777696-78777715 | MS.gene062514:intron | 45.0% |
!! | ATACCCCCAAAAGTGTTACC+AGG | + | chr5.1:78779259-78779278 | None:intergenic | 45.0% |
!! | ATTGGCAATAGCTTTGGGGA+TGG | + | chr5.1:78777931-78777950 | None:intergenic | 45.0% |
!! | CAATATGAAGGGAGTGTTGG+AGG | + | chr5.1:78778615-78778634 | None:intergenic | 45.0% |
!! | GAGAGAAGGCATTGAAGCTT+GGG | - | chr5.1:78777710-78777729 | MS.gene062514:intron | 45.0% |
!!! | GCAGTTCAGAGTTTTGAACG+TGG | - | chr5.1:78776043-78776062 | MS.gene062514:intron | 45.0% |
!!! | GCTGCATTAGTTTTGGTGAG+TGG | - | chr5.1:78777688-78777707 | MS.gene062514:intron | 45.0% |
!!! | TGGTGCTGCTGCATTAGTTT+TGG | - | chr5.1:78777681-78777700 | MS.gene062514:intron | 45.0% |
!!! | TATAATTTATCAATAATTTT+GGG | - | chr5.1:78776737-78776756 | MS.gene062514:intron | 5.0% |
!!! | TTATAATTTATCAATAATTT+TGG | - | chr5.1:78776736-78776755 | MS.gene062514:intron | 5.0% |
ACACGTTCCACAGCACAGAA+AGG | + | chr5.1:78778244-78778263 | None:intergenic | 50.0% | |
ACGTTCCACAGCACAGAAAG+GGG | + | chr5.1:78778242-78778261 | None:intergenic | 50.0% | |
ATATGGGATGCGATGGAGGA+TGG | + | chr5.1:78778488-78778507 | None:intergenic | 50.0% | |
ATCACTCCGGTTGAAGTCTC+TGG | - | chr5.1:78776103-78776122 | MS.gene062514:intron | 50.0% | |
CACGTTCCACAGCACAGAAA+GGG | + | chr5.1:78778243-78778262 | None:intergenic | 50.0% | |
CCCAAAGCTATTGCCAATGC+AGG | - | chr5.1:78777933-78777952 | MS.gene062514:intron | 50.0% | |
CTAAGTACCTGGCAGAAGCA+AGG | - | chr5.1:78775707-78775726 | MS.gene062514:intron | 50.0% | |
CTAGTGAATCGTGTCCAAGG+CGG | + | chr5.1:78775821-78775840 | None:intergenic | 50.0% | |
CTCCCCTATGTAAGCACTAC+AGG | - | chr5.1:78778736-78778755 | MS.gene062514:intron | 50.0% | |
CTTCCACCAGAGACTTCAAC+CGG | + | chr5.1:78776112-78776131 | None:intergenic | 50.0% | |
CTTGCTTCTGCCAGGTACTT+AGG | + | chr5.1:78775709-78775728 | None:intergenic | 50.0% | |
CTTTGGGTGGGAAATCACTC+CGG | - | chr5.1:78776090-78776109 | MS.gene062514:intron | 50.0% | |
GACTCCTCTATACAGCCTAG+AGG | - | chr5.1:78774747-78774766 | MS.gene062514:CDS | 50.0% | |
GCAAATATGGGATGCGATGG+AGG | + | chr5.1:78778492-78778511 | None:intergenic | 50.0% | |
GCCATTAAGGACCGCAATGA+AGG | + | chr5.1:78778292-78778311 | None:intergenic | 50.0% | |
GCCCAAGAGAGTGGTTACTT+TGG | - | chr5.1:78776073-78776092 | MS.gene062514:intron | 50.0% | |
GCTTACATAGGGGAGCTTTG+GGG | + | chr5.1:78778731-78778750 | None:intergenic | 50.0% | |
GCTTGCCCCAAACTTAGGTT+TGG | + | chr5.1:78779019-78779038 | None:intergenic | 50.0% | |
GGAATTTCTGCCCAAGAGAG+TGG | - | chr5.1:78776064-78776083 | MS.gene062514:intron | 50.0% | |
GGAGCCTGTAGTGCTTACAT+AGG | + | chr5.1:78778743-78778762 | None:intergenic | 50.0% | |
GGTGTAGGTGGTGTTTGCAA+CGG | - | chr5.1:78779753-78779772 | MS.gene062514:intron | 50.0% | |
GGTTGAAGTCTCTGGTGGAA+GGG | - | chr5.1:78776111-78776130 | MS.gene062514:intron | 50.0% | |
GTACCAAGAAACCCACCCAT+TGG | + | chr5.1:78775200-78775219 | None:intergenic | 50.0% | |
GTATCATTGGGCCATCCTCT+TGG | - | chr5.1:78779215-78779234 | MS.gene062514:intron | 50.0% | |
GTGCTTACATAGGGGAGCTT+TGG | + | chr5.1:78778733-78778752 | None:intergenic | 50.0% | |
GTTGAAGTCTCTGGTGGAAG+GGG | - | chr5.1:78776112-78776131 | MS.gene062514:intron | 50.0% | |
TAGTGAATCGTGTCCAAGGC+GGG | + | chr5.1:78775820-78775839 | None:intergenic | 50.0% | |
TATCCAAAAAAGAGGGGGGG+GGG | + | chr5.1:78778345-78778364 | None:intergenic | 50.0% | |
TCACAGGAGCTCCACAACAA+GGG | + | chr5.1:78779796-78779815 | None:intergenic | 50.0% | |
TCCATTCTCCATCGACACCT+CGG | - | chr5.1:78778786-78778805 | MS.gene062514:intron | 50.0% | |
TGGATATGCTGATGCTGCTC+AGG | - | chr5.1:78777756-78777775 | MS.gene062514:intron | 50.0% | |
TTGCACGTACACCAATGGGT+GGG | - | chr5.1:78775186-78775205 | MS.gene062514:intron | 50.0% | |
! | ACACCAATGGGTGGGTTTCT+TGG | - | chr5.1:78775194-78775213 | MS.gene062514:intron | 50.0% |
! | CAATGGCTTGCCCCAAACTT+AGG | + | chr5.1:78779024-78779043 | None:intergenic | 50.0% |
! | CCCTGCATTGGCAATAGCTT+TGG | + | chr5.1:78777937-78777956 | None:intergenic | 50.0% |
! | GGTGTTGCACGTACACCAAT+GGG | - | chr5.1:78775182-78775201 | MS.gene062514:intron | 50.0% |
!! | ACTTCACGTCGATTCACGTG+TGG | + | chr5.1:78778657-78778676 | None:intergenic | 50.0% |
!! | ATGAAGGGAGTGTTGGAGGA+TGG | + | chr5.1:78778611-78778630 | None:intergenic | 50.0% |
!! | CCTTATGCTGGAAGCATTGC+CGG | + | chr5.1:78777078-78777097 | None:intergenic | 50.0% |
!! | GGAGAGAAGGCATTGAAGCT+TGG | - | chr5.1:78777709-78777728 | MS.gene062514:intron | 50.0% |
!! | TGGTGTTGCACGTACACCAA+TGG | - | chr5.1:78775181-78775200 | MS.gene062514:intron | 50.0% |
AATGACGTTGTTGTGGCCGG+TGG | - | chr5.1:78775661-78775680 | MS.gene062514:intron | 55.0% | |
ACTCCGGTTGAAGTCTCTGG+TGG | - | chr5.1:78776106-78776125 | MS.gene062514:intron | 55.0% | |
ACTGGAGGCTCTGTTACTGC+CGG | - | chr5.1:78777056-78777075 | MS.gene062514:intron | 55.0% | |
AGACAAGCTGCTCTTGGAGC+AGG | - | chr5.1:78775446-78775465 | MS.gene062514:intron | 55.0% | |
AGCTATCGAGCCTAGCTTGG+TGG | + | chr5.1:78775240-78775259 | None:intergenic | 55.0% | |
AGCTATTGCCAATGCAGGGC+TGG | - | chr5.1:78777938-78777957 | MS.gene062514:intron | 55.0% | |
ATCCAAAAAAGAGGGGGGGG+GGG | + | chr5.1:78778344-78778363 | None:intergenic | 55.0% | |
CACAGCACAGAAAGGGGTAG+GGG | + | chr5.1:78778236-78778255 | None:intergenic | 55.0% | |
CACCACTGCAACCAAGAGGA+TGG | + | chr5.1:78779229-78779248 | None:intergenic | 55.0% | |
CCAAGAGCAGCTTGTCTAGC+AGG | + | chr5.1:78775443-78775462 | None:intergenic | 55.0% | |
CCAAGCTTCAAGGAGACTGG+AGG | - | chr5.1:78777041-78777060 | MS.gene062514:intron | 55.0% | |
CCACAGCACAGAAAGGGGTA+GGG | + | chr5.1:78778237-78778256 | None:intergenic | 55.0% | |
CCACCGATCCTGCCATACAA+AGG | - | chr5.1:78778815-78778834 | MS.gene062514:CDS | 55.0% | |
CCGGCAATGCTTCCAGCATA+AGG | - | chr5.1:78777075-78777094 | MS.gene062514:intron | 55.0% | |
CCTCCAGTCTCCTTGAAGCT+TGG | + | chr5.1:78777044-78777063 | None:intergenic | 55.0% | |
CCTGCTAGACAAGCTGCTCT+TGG | - | chr5.1:78775440-78775459 | MS.gene062514:intron | 55.0% | |
CCTTTGTATGGCAGGATCGG+TGG | + | chr5.1:78778818-78778837 | None:intergenic | 55.0% | |
CGACCAAGCTTCAAGGAGAC+TGG | - | chr5.1:78777038-78777057 | MS.gene062514:intron | 55.0% | |
CGGTTGAAGTCTCTGGTGGA+AGG | - | chr5.1:78776110-78776129 | MS.gene062514:intron | 55.0% | |
GAGGAGTCTGAAGATGCTGC+CGG | + | chr5.1:78774735-78774754 | None:intergenic | 55.0% | |
GTAGGTGGTGTTTGCAACGG+AGG | - | chr5.1:78779756-78779775 | MS.gene062514:intron | 55.0% | |
GTTGCACGTACACCAATGGG+TGG | - | chr5.1:78775185-78775204 | MS.gene062514:intron | 55.0% | |
TCCACAGCACAGAAAGGGGT+AGG | + | chr5.1:78778238-78778257 | None:intergenic | 55.0% | |
TCTGTACCTGCCACCAAGCT+AGG | - | chr5.1:78775227-78775246 | MS.gene062514:intron | 55.0% | |
TGAAGTCTCCAGCCCTGCAT+TGG | + | chr5.1:78777949-78777968 | None:intergenic | 55.0% | |
TGGCAATGCCTCGTAACTCG+TGG | + | chr5.1:78778962-78778981 | None:intergenic | 55.0% | |
TGGTGCATCTGCCCTTGTTG+TGG | - | chr5.1:78779782-78779801 | MS.gene062514:CDS | 55.0% | |
TTCAGGAAAGGATCCCGCCT+TGG | - | chr5.1:78775804-78775823 | MS.gene062514:intron | 55.0% | |
TTGCAGTGGTGCTCGTATCC+TGG | - | chr5.1:78779238-78779257 | MS.gene062514:intron | 55.0% | |
! | AGGATCGGTGGACTTATCCG+AGG | + | chr5.1:78778806-78778825 | None:intergenic | 55.0% |
! | GGCATTGAAGCTTGGGCTTC+AGG | - | chr5.1:78777717-78777736 | MS.gene062514:intron | 55.0% |
!! | GGACTTATCCGAGGTGTCGA+TGG | + | chr5.1:78778797-78778816 | None:intergenic | 55.0% |
!! | TCACGTCGATTCACGTGTGG+TGG | + | chr5.1:78778654-78778673 | None:intergenic | 55.0% |
!! | TCCGAGGTGTCGATGGAGAA+TGG | + | chr5.1:78778790-78778809 | None:intergenic | 55.0% |
CAAGGACGAGGGCCTAGGAA+AGG | - | chr5.1:78776156-78776175 | MS.gene062514:intron | 60.0% | |
CCCTACCCCTTTCTGTGCTG+TGG | - | chr5.1:78778234-78778253 | MS.gene062514:intron | 60.0% | |
CGAGCACCACTGCAACCAAG+AGG | + | chr5.1:78779233-78779252 | None:intergenic | 60.0% | |
CGTTGTTGTGGCCGGTGGTA+TGG | - | chr5.1:78775666-78775685 | MS.gene062514:intron | 60.0% | |
GGCCATCCTCTTGGTTGCAG+TGG | - | chr5.1:78779224-78779243 | MS.gene062514:intron | 60.0% | |
GGTGGTGTTTGCAACGGAGG+AGG | - | chr5.1:78779759-78779778 | MS.gene062514:intron | 60.0% | |
GGTGTTTGCAACGGAGGAGG+TGG | - | chr5.1:78779762-78779781 | MS.gene062514:intron | 60.0% | |
GTTGACAAGGACGAGGGCCT+AGG | - | chr5.1:78776151-78776170 | MS.gene062514:intron | 60.0% | |
TCCAAAAAAGAGGGGGGGGG+GGG | + | chr5.1:78778343-78778362 | None:intergenic | 60.0% | |
TGGGATGCGATGGAGGATGG+CGG | + | chr5.1:78778485-78778504 | None:intergenic | 60.0% | |
! | ATCGAGCCTAGCTTGGTGGC+AGG | + | chr5.1:78775236-78775255 | None:intergenic | 60.0% |
!! | GCTTTGGGGATGGCAATGGC+TGG | + | chr5.1:78777921-78777940 | None:intergenic | 60.0% |
AAAAAAGAGGGGGGGGGGGG+GGG | + | chr5.1:78778340-78778359 | None:intergenic | 65.0% | |
CAAAAAAGAGGGGGGGGGGG+GGG | + | chr5.1:78778341-78778360 | None:intergenic | 65.0% | |
CCAAAAAAGAGGGGGGGGGG+GGG | + | chr5.1:78778342-78778361 | None:intergenic | 65.0% | |
! | GATGCGATGGAGGATGGCGG+AGG | + | chr5.1:78778482-78778501 | None:intergenic | 65.0% |
AAAAAGAGGGGGGGGGGGGG+GGG | + | chr5.1:78778339-78778358 | None:intergenic | 70.0% | |
!!! | CCCCCCCCCCCCCTCTTTTT+TGG | - | chr5.1:78778339-78778358 | MS.gene062514:intron | 70.0% |
AAAAGAGGGGGGGGGGGGGG+GGG | + | chr5.1:78778338-78778357 | None:intergenic | 75.0% | |
! | AAAGAGGGGGGGGGGGGGGG+GGG | + | chr5.1:78778337-78778356 | None:intergenic | 80.0% |
! | AAGAGGGGGGGGGGGGGGGG+GGG | + | chr5.1:78778336-78778355 | None:intergenic | 85.0% |
! | AGAGGGGGGGGGGGGGGGGG+GGG | + | chr5.1:78778335-78778354 | None:intergenic | 90.0% |
! | AGGGGGGGGGGGGGGGGGGG+GGG | + | chr5.1:78778333-78778352 | None:intergenic | 95.0% |
! | GAGGGGGGGGGGGGGGGGGG+GGG | + | chr5.1:78778334-78778353 | None:intergenic | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 78774726 | 78779815 | 78774726 | ID=MS.gene062514 |
chr5.1 | mRNA | 78774726 | 78779815 | 78774726 | ID=MS.gene062514.t1;Parent=MS.gene062514 |
chr5.1 | exon | 78779773 | 78779815 | 78779773 | ID=MS.gene062514.t1.exon1;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78779773 | 78779815 | 78779773 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
chr5.1 | exon | 78779275 | 78779373 | 78779275 | ID=MS.gene062514.t1.exon2;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78779275 | 78779373 | 78779275 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
chr5.1 | exon | 78779014 | 78779187 | 78779014 | ID=MS.gene062514.t1.exon3;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78779014 | 78779187 | 78779014 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
chr5.1 | exon | 78778813 | 78778918 | 78778813 | ID=MS.gene062514.t1.exon4;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78778813 | 78778918 | 78778813 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
chr5.1 | exon | 78778594 | 78778732 | 78778594 | ID=MS.gene062514.t1.exon5;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78778594 | 78778732 | 78778594 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
chr5.1 | exon | 78778364 | 78778507 | 78778364 | ID=MS.gene062514.t1.exon6;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78778364 | 78778507 | 78778364 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
chr5.1 | exon | 78777445 | 78777530 | 78777445 | ID=MS.gene062514.t1.exon7;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78777445 | 78777530 | 78777445 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
chr5.1 | exon | 78776764 | 78776863 | 78776764 | ID=MS.gene062514.t1.exon8;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78776764 | 78776863 | 78776764 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
chr5.1 | exon | 78776537 | 78776647 | 78776537 | ID=MS.gene062514.t1.exon9;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78776537 | 78776647 | 78776537 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
chr5.1 | exon | 78776414 | 78776455 | 78776414 | ID=MS.gene062514.t1.exon10;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78776414 | 78776455 | 78776414 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
chr5.1 | exon | 78775267 | 78775353 | 78775267 | ID=MS.gene062514.t1.exon11;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78775267 | 78775353 | 78775267 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
chr5.1 | exon | 78774726 | 78774815 | 78774726 | ID=MS.gene062514.t1.exon12;Parent=MS.gene062514.t1 |
chr5.1 | CDS | 78774726 | 78774815 | 78774726 | ID=cds.MS.gene062514.t1;Parent=MS.gene062514.t1 |
Gene Sequence |
Protein sequence |