Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97692.t1 | XP_013468377.1 | 89.4 | 547 | 44 | 3 | 1 | 546 | 1 | 534 | 1.60E-253 | 885.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97692.t1 | Q8GZM7 | 31.6 | 557 | 288 | 17 | 1 | 546 | 1 | 475 | 1.1e-34 | 149.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97692.t1 | A0A072VK93 | 89.4 | 547 | 44 | 3 | 1 | 546 | 1 | 534 | 1.1e-253 | 885.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene97692.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051734 | MS.gene97692 | 0.839394 | 1.63E-57 | -1.69E-46 |
MS.gene051838 | MS.gene97692 | 0.809017 | 2.33E-50 | -1.69E-46 |
MS.gene052414 | MS.gene97692 | 0.811001 | 8.71E-51 | -1.69E-46 |
MS.gene052870 | MS.gene97692 | 0.8028 | 4.72E-49 | -1.69E-46 |
MS.gene052872 | MS.gene97692 | 0.806262 | 8.96E-50 | -1.69E-46 |
MS.gene053824 | MS.gene97692 | 0.812706 | 3.71E-51 | -1.69E-46 |
MS.gene055577 | MS.gene97692 | 0.802607 | 5.18E-49 | -1.69E-46 |
MS.gene056947 | MS.gene97692 | 0.830126 | 3.50E-55 | -1.69E-46 |
MS.gene057734 | MS.gene97692 | 0.804505 | 2.09E-49 | -1.69E-46 |
MS.gene05913 | MS.gene97692 | 0.810491 | 1.12E-50 | -1.69E-46 |
MS.gene060837 | MS.gene97692 | 0.801703 | 7.94E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97692.t1 | MTR_1g069155 | 92.687 | 547 | 26 | 3 | 1 | 546 | 1 | 534 | 0.0 | 1006 |
MS.gene97692.t1 | MTR_7g099540 | 64.506 | 324 | 84 | 11 | 217 | 534 | 151 | 449 | 9.43e-113 | 343 |
MS.gene97692.t1 | MTR_7g099540 | 63.333 | 330 | 84 | 12 | 217 | 534 | 151 | 455 | 3.82e-110 | 337 |
MS.gene97692.t1 | MTR_3g449770 | 31.004 | 558 | 267 | 21 | 1 | 527 | 1 | 471 | 6.53e-54 | 191 |
MS.gene97692.t1 | MTR_1g084980 | 60.403 | 149 | 55 | 2 | 267 | 411 | 398 | 546 | 2.07e-42 | 162 |
MS.gene97692.t1 | MTR_7g111320 | 30.769 | 520 | 233 | 20 | 32 | 432 | 34 | 545 | 3.60e-35 | 140 |
MS.gene97692.t1 | MTR_1g019240 | 67.949 | 78 | 23 | 1 | 329 | 404 | 85 | 162 | 5.43e-26 | 107 |
MS.gene97692.t1 | MTR_7g110810 | 56.000 | 100 | 40 | 1 | 299 | 394 | 168 | 267 | 1.53e-24 | 105 |
MS.gene97692.t1 | MTR_5g017040 | 74.627 | 67 | 15 | 1 | 338 | 402 | 114 | 180 | 9.35e-24 | 102 |
MS.gene97692.t1 | MTR_1g084980 | 56.311 | 103 | 43 | 1 | 267 | 367 | 398 | 500 | 1.86e-23 | 104 |
MS.gene97692.t1 | MTR_4g131160 | 53.165 | 79 | 33 | 1 | 324 | 398 | 191 | 269 | 5.14e-18 | 86.7 |
MS.gene97692.t1 | MTR_4g131160 | 40.945 | 127 | 57 | 3 | 280 | 398 | 156 | 272 | 5.26e-18 | 86.7 |
MS.gene97692.t1 | MTR_1g080890 | 48.101 | 79 | 37 | 1 | 331 | 405 | 195 | 273 | 8.31e-17 | 82.4 |
MS.gene97692.t1 | MTR_1g017350 | 41.071 | 112 | 55 | 5 | 331 | 437 | 262 | 367 | 9.21e-16 | 80.1 |
MS.gene97692.t1 | MTR_1g017350 | 41.071 | 112 | 55 | 5 | 331 | 437 | 262 | 367 | 1.08e-15 | 79.7 |
MS.gene97692.t1 | MTR_3g116770 | 36.923 | 130 | 72 | 5 | 331 | 452 | 193 | 320 | 1.36e-15 | 79.3 |
MS.gene97692.t1 | MTR_3g116770 | 36.923 | 130 | 72 | 5 | 331 | 452 | 193 | 320 | 1.48e-15 | 79.3 |
MS.gene97692.t1 | MTR_1g017350 | 40.000 | 115 | 55 | 5 | 331 | 437 | 262 | 370 | 2.47e-15 | 78.6 |
MS.gene97692.t1 | MTR_1g017350 | 40.000 | 115 | 55 | 5 | 331 | 437 | 262 | 370 | 2.63e-15 | 78.6 |
MS.gene97692.t1 | MTR_8g062240 | 46.341 | 82 | 42 | 2 | 331 | 410 | 153 | 234 | 8.44e-15 | 75.5 |
MS.gene97692.t1 | MTR_5g037250 | 45.122 | 82 | 43 | 2 | 331 | 410 | 114 | 195 | 2.89e-14 | 73.2 |
MS.gene97692.t1 | MTR_7g053410 | 50.725 | 69 | 33 | 1 | 331 | 398 | 319 | 387 | 3.15e-14 | 75.9 |
MS.gene97692.t1 | MTR_7g053410 | 50.725 | 69 | 33 | 1 | 331 | 398 | 319 | 387 | 3.69e-14 | 75.5 |
MS.gene97692.t1 | MTR_8g012290 | 38.793 | 116 | 52 | 3 | 297 | 393 | 241 | 356 | 3.96e-14 | 75.5 |
MS.gene97692.t1 | MTR_8g012290 | 38.793 | 116 | 52 | 3 | 297 | 393 | 241 | 356 | 3.97e-14 | 75.5 |
MS.gene97692.t1 | MTR_4g070320 | 54.688 | 64 | 28 | 1 | 331 | 393 | 145 | 208 | 4.13e-14 | 74.3 |
MS.gene97692.t1 | MTR_3g498825 | 49.315 | 73 | 36 | 1 | 331 | 402 | 149 | 221 | 4.45e-14 | 73.9 |
MS.gene97692.t1 | MTR_8g065740 | 54.688 | 64 | 28 | 1 | 331 | 393 | 307 | 370 | 1.11e-13 | 73.9 |
MS.gene97692.t1 | MTR_5g048860 | 54.688 | 64 | 28 | 1 | 331 | 393 | 367 | 430 | 1.17e-13 | 73.9 |
MS.gene97692.t1 | MTR_5g005110 | 33.333 | 114 | 65 | 1 | 327 | 440 | 222 | 324 | 1.71e-13 | 72.0 |
MS.gene97692.t1 | MTR_8g099880 | 45.946 | 74 | 38 | 2 | 331 | 402 | 147 | 220 | 2.11e-13 | 72.0 |
MS.gene97692.t1 | MTR_3g103030 | 33.636 | 110 | 58 | 2 | 327 | 436 | 227 | 321 | 3.39e-13 | 71.2 |
MS.gene97692.t1 | MTR_1g106470 | 33.645 | 107 | 57 | 2 | 323 | 424 | 185 | 282 | 4.76e-13 | 70.1 |
MS.gene97692.t1 | MTR_1g059270 | 38.636 | 88 | 52 | 2 | 331 | 416 | 162 | 249 | 5.25e-13 | 70.5 |
MS.gene97692.t1 | MTR_1g018090 | 45.455 | 66 | 36 | 0 | 327 | 392 | 272 | 337 | 7.18e-12 | 67.4 |
MS.gene97692.t1 | MTR_1g059270 | 43.478 | 69 | 38 | 1 | 331 | 398 | 162 | 230 | 1.03e-11 | 65.9 |
MS.gene97692.t1 | MTR_1g106460 | 32.323 | 99 | 58 | 1 | 326 | 424 | 235 | 324 | 1.23e-11 | 66.6 |
MS.gene97692.t1 | MTR_7g092510 | 35.043 | 117 | 64 | 4 | 331 | 444 | 175 | 282 | 2.87e-11 | 65.5 |
MS.gene97692.t1 | MTR_6g084120 | 45.833 | 72 | 38 | 1 | 316 | 386 | 142 | 213 | 3.36e-11 | 64.3 |
MS.gene97692.t1 | MTR_7g039110 | 58.182 | 55 | 20 | 1 | 313 | 367 | 284 | 335 | 6.91e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97692.t1 | AT2G20180 | 39.890 | 544 | 205 | 25 | 1 | 520 | 1 | 446 | 2.43e-76 | 249 |
MS.gene97692.t1 | AT2G20180 | 39.890 | 544 | 205 | 25 | 1 | 520 | 1 | 446 | 2.43e-76 | 249 |
MS.gene97692.t1 | AT2G20180 | 39.890 | 544 | 205 | 25 | 1 | 520 | 1 | 446 | 2.43e-76 | 249 |
MS.gene97692.t1 | AT2G20180 | 39.890 | 544 | 205 | 25 | 1 | 520 | 1 | 446 | 2.43e-76 | 249 |
MS.gene97692.t1 | AT2G20180 | 40.708 | 452 | 165 | 19 | 86 | 520 | 10 | 375 | 6.29e-65 | 217 |
MS.gene97692.t1 | AT2G20180 | 40.708 | 452 | 165 | 19 | 86 | 520 | 10 | 375 | 6.29e-65 | 217 |
MS.gene97692.t1 | AT2G20180 | 40.708 | 452 | 165 | 19 | 86 | 520 | 10 | 375 | 6.29e-65 | 217 |
MS.gene97692.t1 | AT2G20180 | 38.592 | 412 | 158 | 19 | 1 | 390 | 1 | 339 | 8.14e-55 | 188 |
MS.gene97692.t1 | AT4G28800 | 31.590 | 497 | 228 | 16 | 29 | 515 | 17 | 411 | 1.30e-51 | 183 |
MS.gene97692.t1 | AT4G28800 | 31.463 | 499 | 226 | 18 | 26 | 515 | 26 | 417 | 7.72e-48 | 173 |
MS.gene97692.t1 | AT4G28790 | 33.645 | 428 | 198 | 14 | 23 | 436 | 16 | 371 | 7.79e-45 | 164 |
MS.gene97692.t1 | AT1G09530 | 32.629 | 426 | 209 | 13 | 32 | 413 | 27 | 418 | 1.15e-39 | 152 |
MS.gene97692.t1 | AT1G09530 | 32.629 | 426 | 209 | 13 | 32 | 413 | 27 | 418 | 1.15e-39 | 152 |
MS.gene97692.t1 | AT1G09530 | 32.629 | 426 | 209 | 13 | 32 | 413 | 27 | 418 | 1.15e-39 | 152 |
MS.gene97692.t1 | AT1G09530 | 32.629 | 426 | 209 | 13 | 32 | 413 | 27 | 418 | 1.15e-39 | 152 |
MS.gene97692.t1 | AT1G09530 | 32.629 | 426 | 209 | 13 | 32 | 413 | 27 | 418 | 1.15e-39 | 152 |
MS.gene97692.t1 | AT1G09530 | 32.629 | 426 | 209 | 13 | 32 | 413 | 27 | 418 | 1.15e-39 | 152 |
MS.gene97692.t1 | AT4G28811 | 33.142 | 522 | 243 | 19 | 31 | 537 | 108 | 538 | 4.42e-39 | 150 |
MS.gene97692.t1 | AT4G28790 | 31.915 | 376 | 187 | 10 | 23 | 389 | 16 | 331 | 4.19e-34 | 132 |
MS.gene97692.t1 | AT2G46970 | 53.077 | 130 | 54 | 4 | 295 | 419 | 155 | 282 | 2.59e-30 | 122 |
MS.gene97692.t1 | AT2G46970 | 53.077 | 130 | 54 | 4 | 295 | 419 | 164 | 291 | 3.70e-30 | 122 |
MS.gene97692.t1 | AT2G46970 | 53.077 | 130 | 54 | 4 | 295 | 419 | 186 | 313 | 3.84e-30 | 122 |
MS.gene97692.t1 | AT4G28815 | 39.796 | 196 | 66 | 7 | 326 | 521 | 65 | 208 | 6.23e-30 | 117 |
MS.gene97692.t1 | AT4G28815 | 39.796 | 196 | 66 | 7 | 326 | 521 | 141 | 284 | 4.11e-29 | 117 |
MS.gene97692.t1 | AT3G59060 | 52.482 | 141 | 52 | 4 | 295 | 420 | 211 | 351 | 2.87e-28 | 117 |
MS.gene97692.t1 | AT3G59060 | 52.482 | 141 | 52 | 4 | 295 | 420 | 211 | 351 | 3.26e-28 | 117 |
MS.gene97692.t1 | AT3G59060 | 52.482 | 141 | 52 | 4 | 295 | 420 | 211 | 351 | 3.26e-28 | 117 |
MS.gene97692.t1 | AT3G59060 | 52.482 | 141 | 52 | 4 | 295 | 420 | 211 | 351 | 3.26e-28 | 117 |
MS.gene97692.t1 | AT5G67110 | 55.446 | 101 | 41 | 2 | 307 | 405 | 67 | 165 | 1.98e-25 | 104 |
MS.gene97692.t1 | AT4G36930 | 73.611 | 72 | 17 | 1 | 335 | 404 | 197 | 268 | 2.63e-25 | 108 |
MS.gene97692.t1 | AT2G43010 | 65.263 | 95 | 25 | 2 | 323 | 409 | 245 | 339 | 3.45e-24 | 105 |
MS.gene97692.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 296 | 409 | 223 | 339 | 3.58e-24 | 105 |
MS.gene97692.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 296 | 409 | 223 | 339 | 3.90e-24 | 105 |
MS.gene97692.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 296 | 409 | 230 | 346 | 4.30e-24 | 105 |
MS.gene97692.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 296 | 409 | 265 | 381 | 7.68e-24 | 105 |
MS.gene97692.t1 | AT4G00050 | 65.753 | 73 | 25 | 0 | 320 | 392 | 96 | 168 | 5.41e-23 | 99.8 |
MS.gene97692.t1 | AT4G00050 | 65.753 | 73 | 25 | 0 | 320 | 392 | 198 | 270 | 1.16e-22 | 100 |
MS.gene97692.t1 | AT4G00050 | 65.753 | 73 | 25 | 0 | 320 | 392 | 198 | 270 | 1.62e-22 | 100 |
MS.gene97692.t1 | AT2G24260 | 58.571 | 70 | 29 | 0 | 324 | 393 | 30 | 99 | 1.23e-19 | 89.0 |
MS.gene97692.t1 | AT5G50915 | 33.668 | 199 | 114 | 5 | 266 | 450 | 67 | 261 | 1.57e-19 | 89.0 |
MS.gene97692.t1 | AT5G50915 | 33.668 | 199 | 114 | 5 | 266 | 450 | 67 | 261 | 1.57e-19 | 89.0 |
MS.gene97692.t1 | AT5G50915 | 35.329 | 167 | 92 | 4 | 298 | 450 | 97 | 261 | 2.42e-19 | 89.0 |
MS.gene97692.t1 | AT5G50915 | 35.329 | 167 | 92 | 4 | 298 | 450 | 97 | 261 | 2.42e-19 | 89.0 |
MS.gene97692.t1 | AT2G24260 | 58.571 | 70 | 29 | 0 | 324 | 393 | 133 | 202 | 5.85e-19 | 89.0 |
MS.gene97692.t1 | AT3G62090 | 48.454 | 97 | 45 | 2 | 331 | 425 | 167 | 260 | 1.08e-18 | 88.2 |
MS.gene97692.t1 | AT3G62090 | 48.454 | 97 | 45 | 2 | 331 | 425 | 184 | 277 | 1.93e-18 | 87.4 |
MS.gene97692.t1 | AT5G58010 | 60.317 | 63 | 25 | 0 | 331 | 393 | 101 | 163 | 3.88e-18 | 85.5 |
MS.gene97692.t1 | AT4G30980 | 60.317 | 63 | 25 | 0 | 331 | 393 | 132 | 194 | 3.97e-18 | 85.9 |
MS.gene97692.t1 | AT4G30980 | 60.317 | 63 | 25 | 0 | 331 | 393 | 180 | 242 | 1.14e-17 | 85.1 |
MS.gene97692.t1 | AT1G02340 | 39.130 | 138 | 71 | 7 | 343 | 475 | 141 | 270 | 1.70e-16 | 80.5 |
MS.gene97692.t1 | AT1G02340 | 39.130 | 138 | 71 | 7 | 343 | 475 | 134 | 263 | 2.04e-16 | 80.5 |
MS.gene97692.t1 | AT1G59640 | 30.481 | 187 | 111 | 5 | 231 | 410 | 45 | 219 | 4.65e-16 | 79.0 |
MS.gene97692.t1 | AT5G61270 | 40.323 | 124 | 65 | 2 | 283 | 405 | 34 | 149 | 6.41e-16 | 78.6 |
MS.gene97692.t1 | AT5G61270 | 40.323 | 124 | 65 | 2 | 283 | 405 | 34 | 149 | 6.41e-16 | 78.6 |
MS.gene97692.t1 | AT5G61270 | 40.323 | 124 | 65 | 2 | 283 | 405 | 122 | 237 | 2.18e-15 | 78.6 |
MS.gene97692.t1 | AT1G59640 | 45.455 | 99 | 46 | 3 | 320 | 410 | 121 | 219 | 8.14e-15 | 76.3 |
MS.gene97692.t1 | AT4G36540 | 50.725 | 69 | 33 | 1 | 331 | 398 | 143 | 211 | 2.18e-14 | 74.7 |
MS.gene97692.t1 | AT4G36540 | 50.725 | 69 | 33 | 1 | 331 | 398 | 143 | 211 | 2.25e-14 | 74.7 |
MS.gene97692.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 276 | 393 | 168 | 288 | 2.49e-14 | 75.5 |
MS.gene97692.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 276 | 393 | 168 | 288 | 2.49e-14 | 75.5 |
MS.gene97692.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 276 | 393 | 168 | 288 | 2.49e-14 | 75.5 |
MS.gene97692.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 276 | 393 | 168 | 288 | 2.49e-14 | 75.5 |
MS.gene97692.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 276 | 393 | 146 | 266 | 2.64e-14 | 75.1 |
MS.gene97692.t1 | AT1G26260 | 36.508 | 126 | 77 | 2 | 276 | 398 | 117 | 242 | 2.77e-14 | 74.7 |
MS.gene97692.t1 | AT4G34530 | 41.053 | 95 | 54 | 2 | 305 | 398 | 149 | 242 | 2.82e-14 | 74.7 |
MS.gene97692.t1 | AT5G62610 | 50.725 | 69 | 33 | 1 | 331 | 398 | 155 | 223 | 3.09e-14 | 73.9 |
MS.gene97692.t1 | AT5G62610 | 50.725 | 69 | 33 | 1 | 331 | 398 | 155 | 223 | 3.09e-14 | 73.9 |
MS.gene97692.t1 | AT1G10120 | 50.725 | 69 | 33 | 1 | 331 | 398 | 208 | 276 | 3.77e-14 | 74.7 |
MS.gene97692.t1 | AT1G10120 | 50.725 | 69 | 33 | 1 | 331 | 398 | 208 | 276 | 3.77e-14 | 74.7 |
MS.gene97692.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 331 | 398 | 304 | 372 | 4.70e-14 | 75.1 |
MS.gene97692.t1 | AT3G07340 | 50.725 | 69 | 33 | 1 | 331 | 398 | 260 | 328 | 4.71e-14 | 74.7 |
MS.gene97692.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 331 | 398 | 305 | 373 | 4.84e-14 | 75.1 |
MS.gene97692.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 331 | 398 | 305 | 373 | 4.84e-14 | 75.1 |
MS.gene97692.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 331 | 398 | 305 | 373 | 4.84e-14 | 75.1 |
MS.gene97692.t1 | AT3G07340 | 50.725 | 69 | 33 | 1 | 331 | 398 | 260 | 328 | 5.41e-14 | 74.7 |
MS.gene97692.t1 | AT5G48560 | 50.725 | 69 | 33 | 1 | 331 | 398 | 303 | 371 | 6.31e-14 | 74.7 |
MS.gene97692.t1 | AT5G48560 | 50.725 | 69 | 33 | 1 | 331 | 398 | 303 | 371 | 7.32e-14 | 74.7 |
MS.gene97692.t1 | AT2G14760 | 36.735 | 98 | 53 | 1 | 327 | 424 | 235 | 323 | 1.29e-13 | 72.4 |
MS.gene97692.t1 | AT2G18300 | 47.826 | 69 | 35 | 1 | 331 | 398 | 187 | 255 | 1.38e-13 | 72.4 |
MS.gene97692.t1 | AT2G18300 | 47.826 | 69 | 35 | 1 | 331 | 398 | 187 | 255 | 1.41e-13 | 72.4 |
MS.gene97692.t1 | AT3G23690 | 47.826 | 69 | 35 | 1 | 331 | 398 | 193 | 261 | 1.78e-13 | 72.4 |
MS.gene97692.t1 | AT2G18300 | 47.826 | 69 | 35 | 1 | 331 | 398 | 187 | 255 | 2.23e-13 | 72.4 |
MS.gene97692.t1 | AT1G68240 | 42.222 | 90 | 51 | 1 | 315 | 403 | 47 | 136 | 3.81e-13 | 68.6 |
MS.gene97692.t1 | AT1G25330 | 50.000 | 64 | 31 | 1 | 331 | 393 | 106 | 169 | 4.46e-13 | 69.3 |
MS.gene97692.t1 | AT4G33880 | 38.298 | 94 | 49 | 1 | 327 | 420 | 264 | 348 | 5.25e-13 | 70.9 |
MS.gene97692.t1 | AT1G68240 | 42.222 | 90 | 51 | 1 | 315 | 403 | 47 | 136 | 5.46e-13 | 67.8 |
MS.gene97692.t1 | AT1G73830 | 48.438 | 64 | 32 | 1 | 331 | 393 | 149 | 212 | 7.02e-13 | 69.3 |
MS.gene97692.t1 | AT1G73830 | 48.438 | 64 | 32 | 1 | 331 | 393 | 149 | 212 | 7.73e-13 | 69.3 |
MS.gene97692.t1 | AT1G18400 | 48.438 | 64 | 32 | 1 | 331 | 393 | 147 | 210 | 8.66e-13 | 68.9 |
MS.gene97692.t1 | AT1G18400 | 48.438 | 64 | 32 | 1 | 331 | 393 | 147 | 210 | 1.11e-12 | 68.9 |
MS.gene97692.t1 | AT2G42300 | 46.377 | 69 | 36 | 1 | 331 | 398 | 187 | 255 | 1.16e-12 | 68.9 |
MS.gene97692.t1 | AT1G27740 | 44.776 | 67 | 37 | 0 | 326 | 392 | 164 | 230 | 1.26e-12 | 68.6 |
MS.gene97692.t1 | AT3G57800 | 51.562 | 64 | 30 | 1 | 331 | 393 | 206 | 269 | 1.42e-12 | 69.7 |
MS.gene97692.t1 | AT2G42300 | 46.377 | 69 | 36 | 1 | 331 | 398 | 187 | 255 | 1.95e-12 | 68.9 |
MS.gene97692.t1 | AT4G28790 | 27.108 | 332 | 173 | 10 | 23 | 345 | 16 | 287 | 2.82e-12 | 68.2 |
MS.gene97692.t1 | AT4G28790 | 27.108 | 332 | 173 | 10 | 23 | 345 | 16 | 287 | 2.82e-12 | 68.2 |
MS.gene97692.t1 | AT4G28790 | 27.108 | 332 | 173 | 10 | 23 | 345 | 16 | 287 | 2.82e-12 | 68.2 |
MS.gene97692.t1 | AT5G43175 | 36.667 | 90 | 48 | 1 | 331 | 420 | 134 | 214 | 3.39e-12 | 66.6 |
MS.gene97692.t1 | AT2G14760 | 34.021 | 97 | 55 | 1 | 328 | 424 | 249 | 336 | 9.97e-12 | 67.0 |
Find 161 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTAAATTGGCGGTGGTTT+TGG | 0.202001 | 1.2:+52329010 | None:intergenic |
ATGGGGATGGGAATGGGTTT+AGG | 0.204090 | 1.2:-52323380 | MS.gene97692:CDS |
GCAACTGTAGCTGGTCCTTT+TGG | 0.266955 | 1.2:-52323278 | MS.gene97692:CDS |
CGGCAGGGGTGGCGGCTTCT+CGG | 0.320550 | 1.2:-52328678 | MS.gene97692:CDS |
GGAGAATTAGGCAACATATT+AGG | 0.325301 | 1.2:+52323314 | None:intergenic |
GCAGAGCACCAAGGGAGTTA+AGG | 0.325749 | 1.2:+52323159 | None:intergenic |
GGTTTCTTTGAATGATGTAT+AGG | 0.327763 | 1.2:+52329193 | None:intergenic |
GCTGCTGGCAAAGGAGAATT+AGG | 0.328372 | 1.2:+52323302 | None:intergenic |
TGGGGATGGGAATGGGTTTA+GGG | 0.339637 | 1.2:-52323379 | MS.gene97692:CDS |
CTCTGAAACTCAGATTCTTC+CGG | 0.349431 | 1.2:+52328244 | None:intergenic |
GTTTCTTTGAATGATGTATA+GGG | 0.365818 | 1.2:+52329194 | None:intergenic |
GTACGCTGCTTCGAGATTAT+CGG | 0.371790 | 1.2:-52328437 | MS.gene97692:CDS |
GCTTGCATTCTGGATGAATC+AGG | 0.377153 | 1.2:+52323203 | None:intergenic |
TGGTAAGGATCTGTGAAGTT+TGG | 0.382377 | 1.2:+52323110 | None:intergenic |
GGTAAGGATCTGTGAAGTTT+GGG | 0.385109 | 1.2:+52323111 | None:intergenic |
TCCATTTGAATATCGAAATC+TGG | 0.386523 | 1.2:+52329232 | None:intergenic |
CAGAGCACCAAGGGAGTTAA+GGG | 0.397688 | 1.2:+52323160 | None:intergenic |
TTTATGCCGGCGATGGGAAT+GGG | 0.402200 | 1.2:-52323398 | MS.gene97692:CDS |
GGATCTGTGAAGTTTGGGTT+TGG | 0.408214 | 1.2:+52323116 | None:intergenic |
ATGGGAATGGGGATGGGAAT+GGG | 0.415003 | 1.2:-52323386 | MS.gene97692:CDS |
GGCATAAATTGCTGAATTCC+AGG | 0.416047 | 1.2:+52323413 | None:intergenic |
TTCTAGCGGGAGTGCTGAAC+CGG | 0.418643 | 1.2:-52328311 | MS.gene97692:CDS |
CTGGCGGTGGTTGTAGTTGC+CGG | 0.419365 | 1.2:+52328976 | None:intergenic |
AGGAGCGCGACGGCGGAGAC+TGG | 0.419387 | 1.2:-52328406 | MS.gene97692:CDS |
CGAGATTATCGGAAACGATC+AGG | 0.421871 | 1.2:-52328426 | MS.gene97692:CDS |
GAAAAGGAAGGGACGTGAAC+CGG | 0.422354 | 1.2:-52328263 | MS.gene97692:CDS |
ATGGGTTTAGGGATGGAAAT+CGG | 0.430729 | 1.2:-52323368 | MS.gene97692:CDS |
GTTCATGCAAGAAGATGAAA+TGG | 0.432145 | 1.2:-52328887 | MS.gene97692:CDS |
CATTCATCAGTCGGAAGCGC+CGG | 0.433679 | 1.2:-52328784 | MS.gene97692:CDS |
TGGATTATCTTGGCTCCCAC+TGG | 0.435044 | 1.2:+52321995 | None:intergenic |
TCCAACATTGAAGCTTTGTC+AGG | 0.435712 | 1.2:+52325253 | None:intergenic |
AACGAGACCGGCAGGGGTGG+CGG | 0.437941 | 1.2:-52328686 | MS.gene97692:CDS |
TTTGGAATGCGTGATTGATC+TGG | 0.440584 | 1.2:+52323134 | None:intergenic |
TTAGGCAACATATTAGGAAA+TGG | 0.443474 | 1.2:+52323320 | None:intergenic |
GGTGGGGACCGAGGTATTGC+TGG | 0.446521 | 1.2:+52323090 | None:intergenic |
GGTTTCCTCGCCGGATGAAT+CGG | 0.447219 | 1.2:+52328652 | None:intergenic |
GATGGGAATGGGGATGGGAA+TGG | 0.451351 | 1.2:-52323387 | MS.gene97692:CDS |
TCTTGGCTCCCACTGGTACC+TGG | 0.452130 | 1.2:+52322002 | None:intergenic |
TCCAGATTTCGATATTCAAA+TGG | 0.453129 | 1.2:-52329233 | MS.gene97692:CDS |
GTTCTATTCACCACCATCTT+CGG | 0.454792 | 1.2:+52328631 | None:intergenic |
TAGAACACAGAAACCGGATA+TGG | 0.455584 | 1.2:-52328614 | MS.gene97692:CDS |
CGAGAAGCCGCCACCCCTGC+CGG | 0.456524 | 1.2:+52328679 | None:intergenic |
CAGAATGATAATTACGTGAA+AGG | 0.456561 | 1.2:+52329172 | None:intergenic |
GTCATTGCAGTTACAAGTGC+AGG | 0.457289 | 1.2:-52325209 | MS.gene97692:intron |
CAGAAACACGGCGGAGGTAG+TGG | 0.461846 | 1.2:-52328760 | MS.gene97692:CDS |
CGTCGCCTGGTTGTTCTAGC+GGG | 0.462418 | 1.2:-52328324 | MS.gene97692:CDS |
ATTTATGCCGGCGATGGGAA+TGG | 0.464029 | 1.2:-52323399 | MS.gene97692:CDS |
CAGGTGCAGCTGCAGGAACA+TGG | 0.465047 | 1.2:+52323222 | None:intergenic |
GGTGAATAGAACACAGAAAC+CGG | 0.465326 | 1.2:-52328620 | MS.gene97692:CDS |
ATGATACCTATGATGTTTCC+TGG | 0.467201 | 1.2:-52323431 | MS.gene97692:CDS |
GTTCTATTCACCACCATATC+CGG | 0.470011 | 1.2:+52328601 | None:intergenic |
CCAGCAGCAGCAACTGTAGC+TGG | 0.470668 | 1.2:-52323287 | MS.gene97692:CDS |
CCAGCTACAGTTGCTGCTGC+TGG | 0.475321 | 1.2:+52323287 | None:intergenic |
TTAGGGATGGAAATCGGAAT+GGG | 0.475696 | 1.2:-52323362 | MS.gene97692:CDS |
GTTCACTTCTCGCATTACTT+TGG | 0.477874 | 1.2:+52328548 | None:intergenic |
CTTTATGCAGATGATGTCCA+TGG | 0.478571 | 1.2:-52323462 | MS.gene97692:intron |
GATCGAATCTCTCTATGATC+AGG | 0.479842 | 1.2:+52328943 | None:intergenic |
CATTAATTGCTGCACCTGGT+GGG | 0.482274 | 1.2:+52323073 | None:intergenic |
TCAGCAATTTATGCCGGCGA+TGG | 0.482673 | 1.2:-52323405 | MS.gene97692:CDS |
GTTCAGCAAACGAGACCGGC+AGG | 0.485745 | 1.2:-52328694 | MS.gene97692:CDS |
CCTGCATTAATTGCTGCACC+TGG | 0.485944 | 1.2:+52323069 | None:intergenic |
ACCATCTTCGGTTTCCTCGC+CGG | 0.489102 | 1.2:+52328643 | None:intergenic |
AACCGGAGTTGGACCGGAAA+AGG | 0.489470 | 1.2:-52328279 | MS.gene97692:CDS |
ATATTAGGAAATGGCATCAC+TGG | 0.491333 | 1.2:+52323329 | None:intergenic |
TGAATTCCAGGAAACATCAT+AGG | 0.491738 | 1.2:+52323425 | None:intergenic |
GCCGGCGATGGGAATGGGGA+TGG | 0.493972 | 1.2:-52323393 | MS.gene97692:CDS |
CCCATCCCCATTCCCATCGC+CGG | 0.494774 | 1.2:+52323392 | None:intergenic |
GTTTGTTCAGCAAACGAGAC+CGG | 0.495146 | 1.2:-52328698 | MS.gene97692:CDS |
ATGACAGTTACGTCGTCGCC+TGG | 0.498022 | 1.2:-52328337 | MS.gene97692:CDS |
CCGGCGATGGGAATGGGGAT+GGG | 0.499606 | 1.2:-52323392 | MS.gene97692:CDS |
AACTCCGGTTCTCTATGAAC+CGG | 0.499849 | 1.2:+52328292 | None:intergenic |
ACAGTTGCTGCTGCTGGCAA+AGG | 0.505523 | 1.2:+52323293 | None:intergenic |
GATGAATCAGGTGCAGCTGC+AGG | 0.505773 | 1.2:+52323215 | None:intergenic |
GTTGTAGTTGCCGGTGCCGA+CGG | 0.507949 | 1.2:+52328985 | None:intergenic |
GGACCGAGGTATTGCTGGTA+AGG | 0.515019 | 1.2:+52323095 | None:intergenic |
ATCTGGAGGCAGAGCACCAA+GGG | 0.517933 | 1.2:+52323151 | None:intergenic |
TGCGTGTGTGTGAGCACCAC+CGG | 0.519164 | 1.2:-52328382 | MS.gene97692:CDS |
AGGAATCACGCGACTGGCGG+TGG | 0.519980 | 1.2:+52328963 | None:intergenic |
TGGAATTCAGCAATTTATGC+CGG | 0.522421 | 1.2:-52323411 | MS.gene97692:CDS |
CTGAAATCGTGACGGTTGAA+AGG | 0.522705 | 1.2:+52328823 | None:intergenic |
ATTTAGAAAACCGTCGGCAC+CGG | 0.522972 | 1.2:-52328995 | MS.gene97692:CDS |
ATAGCGAACCTTGGTCCAAA+AGG | 0.525545 | 1.2:+52323263 | None:intergenic |
GCAACAAGACGATGAGATCA+TGG | 0.527589 | 1.2:-52329070 | MS.gene97692:CDS |
TTCTCGGCCTCCGATTCATC+CGG | 0.528261 | 1.2:-52328662 | MS.gene97692:CDS |
ATGGAACTATTGTGGCAAAA+CGG | 0.535259 | 1.2:-52329051 | MS.gene97692:CDS |
ATAGAGAACCGGAGTTGGAC+CGG | 0.535858 | 1.2:-52328285 | MS.gene97692:CDS |
GTCAACAGACCAGGTACCAG+TGG | 0.537139 | 1.2:-52322011 | MS.gene97692:CDS |
CAGCAATTTATGCCGGCGAT+GGG | 0.537150 | 1.2:-52323404 | MS.gene97692:CDS |
GCCTGACAAAGCTTCAATGT+TGG | 0.542555 | 1.2:-52325254 | MS.gene97692:CDS |
TCAGCAAACGAGACCGGCAG+GGG | 0.544570 | 1.2:-52328692 | MS.gene97692:CDS |
GCAATACCTCGGTCCCCACC+AGG | 0.546189 | 1.2:-52323087 | MS.gene97692:CDS |
AACGATCAGGAGCGCGACGG+CGG | 0.546234 | 1.2:-52328413 | MS.gene97692:CDS |
ATTCATGTAGTTATCTGCAT+CGG | 0.548506 | 1.2:+52328918 | None:intergenic |
ACCTCCGCCGTGTTTCTGAC+CGG | 0.553023 | 1.2:+52328765 | None:intergenic |
ATTAATTGCTGCACCTGGTG+GGG | 0.553799 | 1.2:+52323074 | None:intergenic |
GCATTAATTGCTGCACCTGG+TGG | 0.556345 | 1.2:+52323072 | None:intergenic |
ATTATGAACCTCTGCAGCAC+GGG | 0.558566 | 1.2:+52325527 | None:intergenic |
GCAAACGAGACCGGCAGGGG+TGG | 0.560535 | 1.2:-52328689 | MS.gene97692:CDS |
AGGTGCAGCTGCAGGAACAT+GGG | 0.560914 | 1.2:+52323223 | None:intergenic |
GATGGGAATGGGTTTAGGGA+TGG | 0.562444 | 1.2:-52323375 | MS.gene97692:CDS |
ATGATCAGGAATCACGCGAC+TGG | 0.564484 | 1.2:+52328957 | None:intergenic |
GCCGGTCAGAAACACGGCGG+AGG | 0.564625 | 1.2:-52328766 | MS.gene97692:CDS |
TGAACCGGTTCATAGAGAAC+CGG | 0.564686 | 1.2:-52328296 | MS.gene97692:CDS |
AGGTATCATGCCACATCCCA+TGG | 0.569792 | 1.2:+52323445 | None:intergenic |
TTTAGGGATGGAAATCGGAA+TGG | 0.578061 | 1.2:-52323363 | MS.gene97692:CDS |
AAAGAGATCCCGTGCTGCAG+AGG | 0.580112 | 1.2:-52325535 | MS.gene97692:CDS |
AAACTCCGACTCACGTTCCG+TGG | 0.580438 | 1.2:+52328717 | None:intergenic |
TTATGCCGGCGATGGGAATG+GGG | 0.582904 | 1.2:-52323397 | MS.gene97692:CDS |
CCAGGTGCAGCAATTAATGC+AGG | 0.585533 | 1.2:-52323069 | MS.gene97692:intron |
GGTTCATAGAGAACCGGAGT+TGG | 0.586478 | 1.2:-52328290 | MS.gene97692:CDS |
TCCGGCGAGGAAACCGAAGA+TGG | 0.594266 | 1.2:-52328644 | MS.gene97692:CDS |
ATGAGATCATGGAACTATTG+TGG | 0.596163 | 1.2:-52329059 | MS.gene97692:CDS |
ACAAGCCACGGAACGTGAGT+CGG | 0.600009 | 1.2:-52328722 | MS.gene97692:CDS |
CAGATGATGTCCATGGGATG+TGG | 0.601497 | 1.2:-52323455 | MS.gene97692:CDS |
GGTGCAGCTGCAGGAACATG+GGG | 0.602136 | 1.2:+52323224 | None:intergenic |
ATCGAACTCGAAGATGCACC+TGG | 0.602615 | 1.2:+52328526 | None:intergenic |
TTCAGCAAACGAGACCGGCA+GGG | 0.603612 | 1.2:-52328693 | MS.gene97692:CDS |
TGCAGCGGCAAGAGAATCGA+CGG | 0.605167 | 1.2:-52328500 | MS.gene97692:CDS |
GCTGCACCTGGTGGGGACCG+AGG | 0.609026 | 1.2:+52323081 | None:intergenic |
TTTATGCAGATGATGTCCAT+GGG | 0.610157 | 1.2:-52323461 | MS.gene97692:intron |
GATTATGAACCTCTGCAGCA+CGG | 0.610880 | 1.2:+52325526 | None:intergenic |
AGAGCACCAAGGGAGTTAAG+GGG | 0.612372 | 1.2:+52323161 | None:intergenic |
CGGAAAAGCTGCGACGACGT+TGG | 0.612425 | 1.2:-52328362 | MS.gene97692:CDS |
GAATATCGAAATCTGGAACA+TGG | 0.612681 | 1.2:+52329239 | None:intergenic |
TTCCTCGCCGGATGAATCGG+AGG | 0.613809 | 1.2:+52328655 | None:intergenic |
AGTAATGCGAGAAGTGAACC+AGG | 0.615012 | 1.2:-52328544 | MS.gene97692:CDS |
AAAGGAGGCATAGCGAACCT+TGG | 0.615246 | 1.2:+52323254 | None:intergenic |
GGAGTTGGACCGGAAAAGGA+AGG | 0.615583 | 1.2:-52328275 | MS.gene97692:CDS |
AACACAGAAACCGGATATGG+TGG | 0.616872 | 1.2:-52328611 | MS.gene97692:CDS |
TGTTATACAAGCACAAGCCA+CGG | 0.625309 | 1.2:-52328734 | MS.gene97692:CDS |
GGTTCATAATCTCTCAGAGA+GGG | 0.625587 | 1.2:-52325514 | MS.gene97692:intron |
CAGCAAAATGTCAACAGACC+AGG | 0.626812 | 1.2:-52322020 | MS.gene97692:CDS |
ACTTATACCGCGGTGCAACA+AGG | 0.628814 | 1.2:-52325370 | MS.gene97692:intron |
TCGTCGCCTGGTTGTTCTAG+CGG | 0.629552 | 1.2:-52328325 | MS.gene97692:CDS |
GAGTTGGACCGGAAAAGGAA+GGG | 0.631011 | 1.2:-52328274 | MS.gene97692:CDS |
AAACACGGCGGAGGTAGTGG+CGG | 0.631102 | 1.2:-52328757 | MS.gene97692:CDS |
AGAATCTGAGTTTCAGAGCG+AGG | 0.634691 | 1.2:-52328239 | MS.gene97692:intron |
GGAAGCGCCGGTCAGAAACA+CGG | 0.635704 | 1.2:-52328772 | MS.gene97692:CDS |
GAGCACCAAGGGAGTTAAGG+GGG | 0.635812 | 1.2:+52323162 | None:intergenic |
GGAATGCGTGATTGATCTGG+AGG | 0.645810 | 1.2:+52323137 | None:intergenic |
ATCAGGAATCACGCGACTGG+CGG | 0.647878 | 1.2:+52328960 | None:intergenic |
AAATCGTGACGGTTGAAAGG+AGG | 0.650313 | 1.2:+52328826 | None:intergenic |
CTTTGCAAGAACTTATACCG+CGG | 0.653949 | 1.2:-52325380 | MS.gene97692:CDS |
GGCCTCCGATTCATCCGGCG+AGG | 0.655663 | 1.2:-52328657 | MS.gene97692:CDS |
GGAAACGATCAGGAGCGCGA+CGG | 0.663906 | 1.2:-52328416 | MS.gene97692:CDS |
TTCGAGTTCGATGATTGCAG+CGG | 0.665279 | 1.2:-52328515 | MS.gene97692:CDS |
GATCCTTACCAGCAATACCT+CGG | 0.665739 | 1.2:-52323098 | MS.gene97692:CDS |
GGCGAGGAAACCGAAGATGG+TGG | 0.671105 | 1.2:-52328641 | MS.gene97692:CDS |
GCACTCCCGCTAGAACAACC+AGG | 0.673024 | 1.2:+52328319 | None:intergenic |
CCGCCAATTTAGAAAACCGT+CGG | 0.675021 | 1.2:-52329001 | MS.gene97692:CDS |
TCTTTGCAGATGTAGATCCA+CGG | 0.678173 | 1.2:+52325553 | None:intergenic |
GGTAGATTCATGTGATACGC+CGG | 0.678374 | 1.2:-52328476 | MS.gene97692:CDS |
TCAACAGACCAGGTACCAGT+GGG | 0.681572 | 1.2:-52322010 | MS.gene97692:CDS |
TGTTTCACCTTGTTGCACCG+CGG | 0.687099 | 1.2:+52325363 | None:intergenic |
GATCTGGAGGCAGAGCACCA+AGG | 0.724657 | 1.2:+52323150 | None:intergenic |
AAGAAGATGAAATGGCATCG+TGG | 0.726842 | 1.2:-52328879 | MS.gene97692:CDS |
TTTCTGAACTGAAATCGTGA+CGG | 0.732941 | 1.2:+52328815 | None:intergenic |
GTGCAGCTGCAGGAACATGG+GGG | 0.749597 | 1.2:+52323225 | None:intergenic |
AGGTTCATAATCTCTCAGAG+AGG | 0.750433 | 1.2:-52325515 | MS.gene97692:CDS |
AGCGCCGGTCAGAAACACGG+CGG | 0.772257 | 1.2:-52328769 | MS.gene97692:CDS |
AGCGGCAAGAGAATCGACGG+TGG | 0.788837 | 1.2:-52328497 | MS.gene97692:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 52321983 | 52329269 | 52321983 | ID=MS.gene97692 |
chr1.2 | mRNA | 52321983 | 52329269 | 52321983 | ID=MS.gene97692.t1;Parent=MS.gene97692 |
chr1.2 | exon | 52329187 | 52329269 | 52329187 | ID=MS.gene97692.t1.exon1;Parent=MS.gene97692.t1 |
chr1.2 | CDS | 52329187 | 52329269 | 52329187 | ID=cds.MS.gene97692.t1;Parent=MS.gene97692.t1 |
chr1.2 | exon | 52328240 | 52329092 | 52328240 | ID=MS.gene97692.t1.exon2;Parent=MS.gene97692.t1 |
chr1.2 | CDS | 52328240 | 52329092 | 52328240 | ID=cds.MS.gene97692.t1;Parent=MS.gene97692.t1 |
chr1.2 | exon | 52325515 | 52325613 | 52325515 | ID=MS.gene97692.t1.exon3;Parent=MS.gene97692.t1 |
chr1.2 | CDS | 52325515 | 52325613 | 52325515 | ID=cds.MS.gene97692.t1;Parent=MS.gene97692.t1 |
chr1.2 | exon | 52325371 | 52325436 | 52325371 | ID=MS.gene97692.t1.exon4;Parent=MS.gene97692.t1 |
chr1.2 | CDS | 52325371 | 52325436 | 52325371 | ID=cds.MS.gene97692.t1;Parent=MS.gene97692.t1 |
chr1.2 | exon | 52325210 | 52325275 | 52325210 | ID=MS.gene97692.t1.exon5;Parent=MS.gene97692.t1 |
chr1.2 | CDS | 52325210 | 52325275 | 52325210 | ID=cds.MS.gene97692.t1;Parent=MS.gene97692.t1 |
chr1.2 | exon | 52323070 | 52323474 | 52323070 | ID=MS.gene97692.t1.exon6;Parent=MS.gene97692.t1 |
chr1.2 | CDS | 52323070 | 52323474 | 52323070 | ID=cds.MS.gene97692.t1;Parent=MS.gene97692.t1 |
chr1.2 | exon | 52321983 | 52322051 | 52321983 | ID=MS.gene97692.t1.exon7;Parent=MS.gene97692.t1 |
chr1.2 | CDS | 52321983 | 52322051 | 52321983 | ID=cds.MS.gene97692.t1;Parent=MS.gene97692.t1 |
Gene Sequence |
Protein sequence |