Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97865.t1 | XP_003621056.2 | 93.5 | 153 | 10 | 0 | 378 | 530 | 26 | 178 | 1.40E-78 | 303.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97865.t1 | Q9SXZ2 | 70.2 | 151 | 44 | 1 | 378 | 528 | 26 | 175 | 3.1e-61 | 237.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97865.t1 | G7KXR8 | 93.5 | 153 | 10 | 0 | 378 | 530 | 21 | 173 | 1.0e-78 | 303.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049232 | MS.gene97865 | 0.831159 | 1.96E-55 | -1.69E-46 |
MS.gene049552 | MS.gene97865 | 0.808562 | 2.91E-50 | -1.69E-46 |
MS.gene049600 | MS.gene97865 | 0.814443 | 1.54E-51 | -1.69E-46 |
MS.gene050496 | MS.gene97865 | 0.804579 | 2.02E-49 | -1.69E-46 |
MS.gene056046 | MS.gene97865 | 0.809076 | 2.26E-50 | -1.69E-46 |
MS.gene056504 | MS.gene97865 | 0.80761 | 4.65E-50 | -1.69E-46 |
MS.gene059837 | MS.gene97865 | 0.80841 | 3.14E-50 | -1.69E-46 |
MS.gene059865 | MS.gene97865 | 0.802155 | 6.42E-49 | -1.69E-46 |
MS.gene060778 | MS.gene97865 | 0.824078 | 9.81E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97865.t1 | MTR_7g006630 | 92.857 | 154 | 11 | 0 | 377 | 530 | 20 | 173 | 3.87e-101 | 302 |
MS.gene97865.t1 | MTR_7g006690 | 88.312 | 154 | 18 | 0 | 377 | 530 | 25 | 178 | 6.92e-98 | 294 |
MS.gene97865.t1 | MTR_6g033040 | 73.684 | 152 | 39 | 1 | 377 | 528 | 25 | 175 | 3.11e-78 | 243 |
MS.gene97865.t1 | MTR_7g084970 | 73.333 | 150 | 39 | 1 | 377 | 526 | 25 | 173 | 7.99e-76 | 237 |
MS.gene97865.t1 | MTR_7g085020 | 65.772 | 149 | 50 | 1 | 378 | 526 | 27 | 174 | 4.03e-66 | 212 |
MS.gene97865.t1 | MTR_7g085040 | 64.085 | 142 | 50 | 1 | 386 | 527 | 30 | 170 | 6.86e-62 | 201 |
MS.gene97865.t1 | MTR_0020s0120 | 56.376 | 149 | 64 | 1 | 378 | 526 | 25 | 172 | 1.77e-55 | 184 |
MS.gene97865.t1 | MTR_0020s0120 | 54.362 | 149 | 60 | 2 | 378 | 526 | 25 | 165 | 1.67e-50 | 171 |
MS.gene97865.t1 | MTR_6g048830 | 40.784 | 255 | 90 | 4 | 37 | 231 | 1 | 254 | 5.31e-50 | 173 |
MS.gene97865.t1 | MTR_7g104460 | 55.634 | 142 | 62 | 1 | 386 | 526 | 33 | 174 | 3.05e-49 | 167 |
MS.gene97865.t1 | MTR_2g086270 | 50.000 | 152 | 72 | 3 | 376 | 526 | 25 | 173 | 4.55e-47 | 162 |
MS.gene97865.t1 | MTR_1g060190 | 53.957 | 139 | 61 | 2 | 380 | 516 | 28 | 165 | 8.49e-47 | 161 |
MS.gene97865.t1 | MTR_1148s0010 | 33.756 | 394 | 200 | 10 | 74 | 417 | 165 | 547 | 2.29e-44 | 166 |
MS.gene97865.t1 | MTR_1148s0010 | 64.444 | 45 | 16 | 0 | 28 | 72 | 30 | 74 | 3.81e-11 | 66.2 |
MS.gene97865.t1 | MTR_6g033695 | 32.213 | 357 | 169 | 9 | 73 | 421 | 432 | 723 | 1.89e-42 | 162 |
MS.gene97865.t1 | MTR_6g033695 | 69.565 | 46 | 14 | 0 | 28 | 73 | 224 | 269 | 2.35e-11 | 67.0 |
MS.gene97865.t1 | MTR_8g106840 | 50.360 | 139 | 67 | 2 | 383 | 520 | 30 | 167 | 1.51e-39 | 142 |
MS.gene97865.t1 | MTR_8g045280 | 30.848 | 389 | 186 | 10 | 73 | 421 | 395 | 740 | 1.74e-37 | 147 |
MS.gene97865.t1 | MTR_3g022785 | 51.562 | 128 | 47 | 3 | 71 | 198 | 334 | 446 | 6.48e-30 | 122 |
MS.gene97865.t1 | MTR_3g022785 | 65.909 | 44 | 15 | 0 | 28 | 71 | 154 | 197 | 3.06e-11 | 66.2 |
MS.gene97865.t1 | MTR_7g033825 | 27.957 | 372 | 225 | 9 | 59 | 420 | 50 | 388 | 1.22e-28 | 120 |
MS.gene97865.t1 | MTR_4g027930 | 41.830 | 153 | 41 | 3 | 74 | 194 | 31 | 167 | 1.73e-28 | 113 |
MS.gene97865.t1 | MTR_0242s0010 | 37.069 | 232 | 125 | 9 | 7 | 230 | 272 | 490 | 2.27e-27 | 116 |
MS.gene97865.t1 | MTR_5g073130 | 35.484 | 186 | 87 | 2 | 75 | 228 | 179 | 363 | 5.98e-27 | 113 |
MS.gene97865.t1 | MTR_6g054900 | 38.506 | 174 | 64 | 5 | 73 | 214 | 59 | 221 | 1.75e-26 | 108 |
MS.gene97865.t1 | MTR_5g021380 | 27.427 | 412 | 212 | 13 | 26 | 369 | 79 | 471 | 8.82e-26 | 112 |
MS.gene97865.t1 | MTR_0073s0040 | 34.555 | 191 | 92 | 2 | 73 | 231 | 83 | 272 | 1.49e-25 | 108 |
MS.gene97865.t1 | MTR_0031s0120 | 30.568 | 229 | 132 | 7 | 40 | 248 | 152 | 373 | 7.10e-24 | 103 |
MS.gene97865.t1 | MTR_6g024400 | 47.222 | 108 | 56 | 1 | 123 | 230 | 349 | 455 | 2.21e-22 | 101 |
MS.gene97865.t1 | MTR_7g083690 | 34.343 | 198 | 86 | 7 | 75 | 236 | 202 | 391 | 1.37e-21 | 99.8 |
MS.gene97865.t1 | MTR_1g062580 | 38.788 | 165 | 57 | 5 | 75 | 238 | 411 | 532 | 5.50e-21 | 97.4 |
MS.gene97865.t1 | MTR_1g062580 | 58.333 | 48 | 20 | 0 | 26 | 73 | 213 | 260 | 3.15e-12 | 69.7 |
MS.gene97865.t1 | MTR_5g048260 | 28.655 | 171 | 71 | 2 | 28 | 147 | 65 | 235 | 3.52e-19 | 87.0 |
MS.gene97865.t1 | MTR_3g049960 | 33.125 | 160 | 82 | 4 | 75 | 229 | 222 | 361 | 1.62e-18 | 89.4 |
MS.gene97865.t1 | MTR_8g103960 | 48.101 | 79 | 40 | 1 | 123 | 201 | 33 | 110 | 8.33e-18 | 80.5 |
MS.gene97865.t1 | MTR_4g061490 | 30.159 | 126 | 56 | 1 | 80 | 173 | 306 | 431 | 8.17e-16 | 80.9 |
MS.gene97865.t1 | MTR_6g053340 | 51.389 | 72 | 34 | 1 | 123 | 194 | 200 | 270 | 1.79e-15 | 77.0 |
MS.gene97865.t1 | MTR_0347s0040 | 76.087 | 46 | 11 | 0 | 28 | 73 | 7 | 52 | 3.70e-15 | 74.3 |
MS.gene97865.t1 | MTR_2g438380 | 55.172 | 58 | 25 | 1 | 138 | 195 | 27 | 83 | 4.49e-15 | 70.9 |
MS.gene97865.t1 | MTR_2g450410 | 35.417 | 96 | 61 | 1 | 75 | 169 | 370 | 465 | 6.28e-15 | 77.4 |
MS.gene97865.t1 | MTR_3g022950 | 46.067 | 89 | 41 | 2 | 26 | 114 | 156 | 237 | 6.56e-14 | 75.1 |
MS.gene97865.t1 | MTR_8g058470 | 26.244 | 221 | 117 | 6 | 94 | 279 | 38 | 247 | 1.90e-13 | 73.2 |
MS.gene97865.t1 | MTR_2g060030 | 67.391 | 46 | 15 | 0 | 28 | 73 | 197 | 242 | 3.13e-13 | 72.8 |
MS.gene97865.t1 | MTR_5g054740 | 66.000 | 50 | 17 | 0 | 26 | 75 | 272 | 321 | 3.76e-13 | 72.8 |
MS.gene97865.t1 | MTR_7g108760 | 25.561 | 223 | 118 | 7 | 94 | 279 | 38 | 249 | 3.79e-13 | 72.4 |
MS.gene97865.t1 | MTR_6g453110 | 66.667 | 45 | 15 | 0 | 28 | 72 | 84 | 128 | 5.87e-12 | 66.6 |
MS.gene97865.t1 | MTR_7g050780 | 64.444 | 45 | 16 | 0 | 28 | 72 | 52 | 96 | 8.19e-12 | 63.2 |
MS.gene97865.t1 | MTR_2g056170 | 64.583 | 48 | 17 | 0 | 26 | 73 | 47 | 94 | 1.20e-11 | 64.7 |
MS.gene97865.t1 | MTR_1g035030 | 52.632 | 57 | 27 | 0 | 31 | 87 | 105 | 161 | 2.07e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97865.t1 | AT1G65480 | 70.199 | 151 | 44 | 1 | 378 | 528 | 70 | 219 | 5.58e-75 | 236 |
MS.gene97865.t1 | AT1G65480 | 69.737 | 152 | 45 | 1 | 377 | 528 | 25 | 175 | 5.64e-75 | 235 |
MS.gene97865.t1 | AT4G20370 | 70.000 | 150 | 44 | 1 | 378 | 527 | 26 | 174 | 7.61e-72 | 227 |
MS.gene97865.t1 | AT5G62040 | 54.667 | 150 | 67 | 1 | 378 | 526 | 25 | 174 | 5.03e-54 | 180 |
MS.gene97865.t1 | AT2G27550 | 52.000 | 150 | 71 | 1 | 378 | 526 | 26 | 175 | 3.75e-51 | 173 |
MS.gene97865.t1 | AT5G03840 | 56.849 | 146 | 60 | 2 | 383 | 526 | 33 | 177 | 7.18e-51 | 172 |
MS.gene97865.t1 | AT1G18100 | 54.110 | 146 | 64 | 2 | 383 | 526 | 29 | 173 | 4.70e-45 | 156 |
Find 127 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCAGGTATTCCCTCATATT+AGG | 0.216132 | 7.2:-92085010 | None:intergenic |
TTTAATTGTCAAAGAGAAAA+TGG | 0.243680 | 7.2:+92087155 | MS.gene97865:CDS |
CAATCAGACAATTGTTCTTT+AGG | 0.246663 | 7.2:+92076958 | MS.gene97865:CDS |
TTTGCAGAAGTTTATAATCT+TGG | 0.279344 | 7.2:+92087110 | MS.gene97865:CDS |
GATTCCTTATCTAAAGAATA+TGG | 0.288867 | 7.2:+92077399 | MS.gene97865:CDS |
TTGAGCCGACGGTGATTTCT+AGG | 0.304174 | 7.2:+92077520 | MS.gene97865:CDS |
TTGCTAGGGCTTGGTCCATC+AGG | 0.306220 | 7.2:-92084986 | None:intergenic |
TCAAGGGACGAACGTTACTA+TGG | 0.321225 | 7.2:+92075747 | MS.gene97865:CDS |
CTGCTTGGCACAGGTTTCAT+TGG | 0.326852 | 7.2:+92077443 | MS.gene97865:CDS |
TGTTGTTTAGGCAACCTTGT+AGG | 0.357429 | 7.2:+92087039 | MS.gene97865:CDS |
GCAGGTATTCCCTCATATTA+GGG | 0.362646 | 7.2:-92085009 | None:intergenic |
TATTAAAATCATTGAGGAAT+GGG | 0.367813 | 7.2:+92077083 | MS.gene97865:CDS |
ATTTAGACATTATTCCTCTT+GGG | 0.372926 | 7.2:+92076713 | MS.gene97865:CDS |
CCCTGTAGTCGCTGGAATAT+TGG | 0.373232 | 7.2:-92086295 | None:intergenic |
CCCTCATATTAGGGTTGCTA+GGG | 0.374720 | 7.2:-92085000 | None:intergenic |
GTGTGATATTTGTGTTGTTT+AGG | 0.376720 | 7.2:+92087027 | MS.gene97865:CDS |
AACATGAATGACGATGTTTA+CGG | 0.383362 | 7.2:+92076111 | MS.gene97865:CDS |
GGGTTTGATTTATGTTGGTT+TGG | 0.384899 | 7.2:+92077479 | MS.gene97865:CDS |
TTAGAAGAAGCTACAGATAA+TGG | 0.388422 | 7.2:+92077246 | MS.gene97865:CDS |
GGTTTGATTTATGTTGGTTT+GGG | 0.389931 | 7.2:+92077480 | MS.gene97865:CDS |
ATATTAGGGTTGCTAGGGCT+TGG | 0.390387 | 7.2:-92084995 | None:intergenic |
GATAGCAACATCGTCATTAG+AGG | 0.398390 | 7.2:+92077011 | MS.gene97865:CDS |
GTCATGTAGCTCAGGATTAT+CGG | 0.399793 | 7.2:-92077169 | None:intergenic |
CTTGGCACAGGTTTCATTGG+AGG | 0.403846 | 7.2:+92077446 | MS.gene97865:CDS |
TTCATTGGAGGGGTGTGCGT+CGG | 0.405770 | 7.2:+92077458 | MS.gene97865:CDS |
TCATTGGAGGGGTGTGCGTC+GGG | 0.408827 | 7.2:+92077459 | MS.gene97865:CDS |
TTACAAATTCAGTGTCTTTG+AGG | 0.412870 | 7.2:+92083461 | MS.gene97865:intron |
TGTCAAAGAGAAAATGGTTC+TGG | 0.415376 | 7.2:+92087161 | MS.gene97865:CDS |
GGATGACGCTTGTTTGTTTG+AGG | 0.425038 | 7.2:+92077119 | MS.gene97865:CDS |
TCCGCCTGGTTAGCACTCTT+AGG | 0.425828 | 7.2:-92077375 | None:intergenic |
TGTTGGTTTGGGTGCACCTT+CGG | 0.426153 | 7.2:+92077491 | MS.gene97865:CDS |
GATTTAGACATTATTCCTCT+TGG | 0.432142 | 7.2:+92076712 | MS.gene97865:CDS |
GCGACTACAGGGACAACTTT+CGG | 0.432307 | 7.2:+92086306 | MS.gene97865:CDS |
GCCCTAGCAACCCTAATATG+AGG | 0.433466 | 7.2:+92084999 | MS.gene97865:CDS |
TGCATATGAAATGCCTCAGC+TGG | 0.434055 | 7.2:+92077338 | MS.gene97865:CDS |
AAATCATAATGTGGATGTTC+TGG | 0.434349 | 7.2:+92077203 | MS.gene97865:CDS |
TACAAATTCAGTGTCTTTGA+GGG | 0.441798 | 7.2:+92083462 | MS.gene97865:intron |
CACCAACTTGAACTCTTGGT+TGG | 0.442454 | 7.2:-92083549 | None:intergenic |
GCGATTGAAGAAGGTTATGA+AGG | 0.445772 | 7.2:+92077671 | MS.gene97865:CDS |
AGGAAGGGATTCGAAGTTTG+TGG | 0.447123 | 7.2:+92076054 | MS.gene97865:intron |
TGTCCACCAACTTGAACTCT+TGG | 0.448736 | 7.2:-92083553 | None:intergenic |
ACCAATATTCCAGCGACTAC+AGG | 0.450659 | 7.2:+92086294 | MS.gene97865:CDS |
TTGGCACAGGTTTCATTGGA+GGG | 0.452882 | 7.2:+92077447 | MS.gene97865:CDS |
TGAATCCCTGATGTTGGTCT+TGG | 0.453418 | 7.2:-92087002 | None:intergenic |
ATTTCCATATTCTTTAGATA+AGG | 0.457699 | 7.2:-92077403 | None:intergenic |
ATCTTCGACAGTCTAGGGTT+AGG | 0.466088 | 7.2:+92075718 | MS.gene97865:CDS |
AATGCCTCAGCTGGGTTCTC+CGG | 0.470510 | 7.2:+92077347 | MS.gene97865:CDS |
GAAAGTCCAAGACCAACATC+AGG | 0.479268 | 7.2:+92086996 | MS.gene97865:CDS |
TCCCTCATATTAGGGTTGCT+AGG | 0.481348 | 7.2:-92085001 | None:intergenic |
TGCTAGGGCTTGGTCCATCA+GGG | 0.485165 | 7.2:-92084985 | None:intergenic |
TAGTCCTAAGAGTGCTAACC+AGG | 0.487085 | 7.2:+92077371 | MS.gene97865:CDS |
GAGGCGCGGTCTTCAAGGTC+TGG | 0.491539 | 7.2:+92077579 | MS.gene97865:CDS |
TTAAAATAGAGAGCAGCAAC+AGG | 0.494414 | 7.2:-92087137 | None:intergenic |
TCTACATCGTCATGTAGCTC+AGG | 0.498033 | 7.2:-92077177 | None:intergenic |
GAGAAAATGGTTCTGGTGGA+AGG | 0.503564 | 7.2:+92087168 | MS.gene97865:CDS |
TCATGTAGCTCAGGATTATC+GGG | 0.504235 | 7.2:-92077168 | None:intergenic |
CAGAATAGAGTGGAGGATGG+AGG | 0.504686 | 7.2:+92076682 | MS.gene97865:intron |
ATATTAAAATCATTGAGGAA+TGG | 0.508239 | 7.2:+92077082 | MS.gene97865:CDS |
GACAATTGTTCTTTAGGTCG+AGG | 0.508441 | 7.2:+92076964 | MS.gene97865:CDS |
AAAGTTGTCCCTGTAGTCGC+TGG | 0.509224 | 7.2:-92086303 | None:intergenic |
ATTAAAATCATTGAGGAATG+GGG | 0.512057 | 7.2:+92077084 | MS.gene97865:CDS |
GGGAGATGTCTGCTTGGCAC+AGG | 0.515392 | 7.2:+92077434 | MS.gene97865:CDS |
TTAGCACTCTTAGGACTATC+CGG | 0.523048 | 7.2:-92077366 | None:intergenic |
AGGCTCACTATATTAGCTCC+TGG | 0.523146 | 7.2:+92087059 | MS.gene97865:CDS |
AACTTCCTACTTACCAATGC+AGG | 0.524098 | 7.2:-92085027 | None:intergenic |
TATTCCTCTTGGGGCTGACA+AGG | 0.524752 | 7.2:+92076723 | MS.gene97865:CDS |
AAGTTATGTGTTCTTGATTG+TGG | 0.528356 | 7.2:+92076925 | MS.gene97865:intron |
GAATATGGAAATAATATGAC+GGG | 0.531455 | 7.2:+92077414 | MS.gene97865:CDS |
ATATGAGGGAATACCTGCAT+TGG | 0.531611 | 7.2:+92085014 | MS.gene97865:CDS |
CTAGGGTTAGGTATGCATCA+AGG | 0.536848 | 7.2:+92075730 | MS.gene97865:CDS |
AAGTTGGTGGACATGACCTC+AGG | 0.539063 | 7.2:+92083563 | MS.gene97865:CDS |
CAAGGGACGAACGTTACTAT+GGG | 0.539208 | 7.2:+92075748 | MS.gene97865:CDS |
GCGTCGGGTTTGATTTATGT+TGG | 0.539546 | 7.2:+92077474 | MS.gene97865:CDS |
GGTTGGTTGACTATCTGAGA+GGG | 0.539901 | 7.2:-92083532 | None:intergenic |
CAGGTGATGGTGGACCCTGA+TGG | 0.543435 | 7.2:+92084971 | MS.gene97865:intron |
TTAGAGGTGGTGAATGTGAC+TGG | 0.545365 | 7.2:+92077027 | MS.gene97865:CDS |
TGGCACAGGTTTCATTGGAG+GGG | 0.545769 | 7.2:+92077448 | MS.gene97865:CDS |
CAAAGAGAAAATGGTTCTGG+TGG | 0.545943 | 7.2:+92087164 | MS.gene97865:CDS |
GCTAATATAGTGAGCCTACA+AGG | 0.546035 | 7.2:-92087053 | None:intergenic |
TTTAGACATTATTCCTCTTG+GGG | 0.548712 | 7.2:+92076714 | MS.gene97865:CDS |
AAGGTCTGGTCCGTGGAGTG+TGG | 0.554355 | 7.2:+92077593 | MS.gene97865:CDS |
TAGATAAGGAATCATCCGCC+TGG | 0.563308 | 7.2:-92077389 | None:intergenic |
TAGGGTTAGGTATGCATCAA+GGG | 0.569726 | 7.2:+92075731 | MS.gene97865:CDS |
TCAGTGTGAGAATATGAACT+TGG | 0.571631 | 7.2:+92077290 | MS.gene97865:CDS |
CAACCAAGAGTTCAAGTTGG+TGG | 0.573770 | 7.2:+92083550 | MS.gene97865:CDS |
GAAAACGTTTGACCCAGATA+AGG | 0.576074 | 7.2:-92076758 | None:intergenic |
AAGCGACTTCGGGACATGGA+TGG | 0.576249 | 7.2:+92075690 | None:intergenic |
TGACGCTTGTTTGTTTGAGG+AGG | 0.580732 | 7.2:+92077122 | MS.gene97865:CDS |
AGAATATGGAAATAATATGA+CGG | 0.581872 | 7.2:+92077413 | MS.gene97865:CDS |
TTCGGCTGCAATTGAGCCGA+CGG | 0.582398 | 7.2:+92077509 | MS.gene97865:CDS |
GAATATGAACTTGGAGACTA+CGG | 0.585276 | 7.2:+92077299 | MS.gene97865:CDS |
CGATTGAAGAAGGTTATGAA+GGG | 0.586458 | 7.2:+92077672 | MS.gene97865:CDS |
GTCGGCTCAATTGCAGCCGA+AGG | 0.587752 | 7.2:-92077507 | None:intergenic |
CCCTAGCAACCCTAATATGA+GGG | 0.588503 | 7.2:+92085000 | MS.gene97865:CDS |
ACACGATGAATCCCTGATGT+TGG | 0.591037 | 7.2:-92087008 | None:intergenic |
CCAATATTCCAGCGACTACA+GGG | 0.594633 | 7.2:+92086295 | MS.gene97865:CDS |
GGAGACTACGGTGCTAGTTG+AGG | 0.598081 | 7.2:+92077311 | MS.gene97865:CDS |
ATTCAGAATAGAGTGGAGGA+TGG | 0.603994 | 7.2:+92076679 | MS.gene97865:intron |
TAATGTTCAACATGGTGATG+TGG | 0.609535 | 7.2:+92077626 | MS.gene97865:CDS |
TGGTTGGTTGACTATCTGAG+AGG | 0.609629 | 7.2:-92083533 | None:intergenic |
GCATATGAAATGCCTCAGCT+GGG | 0.610753 | 7.2:+92077339 | MS.gene97865:CDS |
TGTAGAAACAAATCATAATG+TGG | 0.611113 | 7.2:+92077194 | MS.gene97865:CDS |
TCCGCTTATTCAGAATAGAG+TGG | 0.614611 | 7.2:+92076672 | MS.gene97865:intron |
TATGACGGGAGATGTCTGCT+TGG | 0.617370 | 7.2:+92077428 | MS.gene97865:CDS |
AAAGTCCAAGACCAACATCA+GGG | 0.617461 | 7.2:+92086997 | MS.gene97865:CDS |
TCACTATATTAGCTCCTGGA+TGG | 0.620159 | 7.2:+92087063 | MS.gene97865:CDS |
GGTCTTCAAGGTCTGGTCCG+TGG | 0.620338 | 7.2:+92077586 | MS.gene97865:CDS |
TGTAACCACTCCACACTCCA+CGG | 0.629638 | 7.2:-92077603 | None:intergenic |
ATATGCTAATGTTCGTGATG+TGG | 0.629901 | 7.2:+92076143 | MS.gene97865:CDS |
AGCAACATCGTCATTAGAGG+TGG | 0.635431 | 7.2:+92077014 | MS.gene97865:CDS |
CGCTTCCTAGAAATCACCGT+CGG | 0.638558 | 7.2:-92077525 | None:intergenic |
CCTCAGGACTCTATACACTC+TGG | 0.640356 | 7.2:+92083579 | MS.gene97865:CDS |
AATGTTCAACATGGTGATGT+GGG | 0.644335 | 7.2:+92077627 | MS.gene97865:CDS |
AAAATGGTTCTGGTGGAAGG+AGG | 0.651291 | 7.2:+92087171 | MS.gene97865:CDS |
AAAACCTTGTCAGCCCCAAG+AGG | 0.651743 | 7.2:-92076727 | None:intergenic |
CTGGTCCGTGGAGTGTGGAG+TGG | 0.653293 | 7.2:+92077598 | MS.gene97865:CDS |
AACCAACCAAGAGTTCAAGT+TGG | 0.659781 | 7.2:+92083547 | MS.gene97865:CDS |
ATGGGGATTCTGATTCTGAG+AGG | 0.664602 | 7.2:+92075766 | MS.gene97865:CDS |
GCTTATTCAGAATAGAGTGG+AGG | 0.665190 | 7.2:+92076675 | MS.gene97865:intron |
TGGTTACATAATGTTCAACA+TGG | 0.679551 | 7.2:+92077618 | MS.gene97865:CDS |
TCCTAAGAGTGCTAACCAGG+CGG | 0.681301 | 7.2:+92077374 | MS.gene97865:CDS |
CTATCCGGAGAACCCAGCTG+AGG | 0.687986 | 7.2:-92077351 | None:intergenic |
AACAAAGAAGTCAACAACGG+TGG | 0.701619 | 7.2:+92083499 | MS.gene97865:CDS |
AATAACAAAGAAGTCAACAA+CGG | 0.709279 | 7.2:+92083496 | MS.gene97865:CDS |
TGGTGTGCATTATGATAACG+AGG | 0.709699 | 7.2:+92077266 | MS.gene97865:CDS |
AAGGGACGAACGTTACTATG+GGG | 0.729284 | 7.2:+92075749 | MS.gene97865:CDS |
CCAGAGTGTATAGAGTCCTG+AGG | 0.732541 | 7.2:-92083579 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 92075705 | 92087205 | 92075705 | ID=MS.gene97865 |
chr7.2 | mRNA | 92075705 | 92087205 | 92075705 | ID=MS.gene97865.t1;Parent=MS.gene97865 |
chr7.2 | exon | 92075705 | 92075787 | 92075705 | ID=MS.gene97865.t1.exon1;Parent=MS.gene97865.t1 |
chr7.2 | CDS | 92075705 | 92075787 | 92075705 | ID=cds.MS.gene97865.t1;Parent=MS.gene97865.t1 |
chr7.2 | exon | 92076056 | 92076191 | 92076056 | ID=MS.gene97865.t1.exon2;Parent=MS.gene97865.t1 |
chr7.2 | CDS | 92076056 | 92076191 | 92076056 | ID=cds.MS.gene97865.t1;Parent=MS.gene97865.t1 |
chr7.2 | exon | 92076685 | 92076831 | 92076685 | ID=MS.gene97865.t1.exon3;Parent=MS.gene97865.t1 |
chr7.2 | CDS | 92076685 | 92076831 | 92076685 | ID=cds.MS.gene97865.t1;Parent=MS.gene97865.t1 |
chr7.2 | exon | 92076928 | 92077693 | 92076928 | ID=MS.gene97865.t1.exon4;Parent=MS.gene97865.t1 |
chr7.2 | CDS | 92076928 | 92077693 | 92076928 | ID=cds.MS.gene97865.t1;Parent=MS.gene97865.t1 |
chr7.2 | exon | 92083473 | 92083600 | 92083473 | ID=MS.gene97865.t1.exon5;Parent=MS.gene97865.t1 |
chr7.2 | CDS | 92083473 | 92083600 | 92083473 | ID=cds.MS.gene97865.t1;Parent=MS.gene97865.t1 |
chr7.2 | exon | 92084974 | 92085035 | 92084974 | ID=MS.gene97865.t1.exon6;Parent=MS.gene97865.t1 |
chr7.2 | CDS | 92084974 | 92085035 | 92084974 | ID=cds.MS.gene97865.t1;Parent=MS.gene97865.t1 |
chr7.2 | exon | 92086287 | 92086327 | 92086287 | ID=MS.gene97865.t1.exon7;Parent=MS.gene97865.t1 |
chr7.2 | CDS | 92086287 | 92086327 | 92086287 | ID=cds.MS.gene97865.t1;Parent=MS.gene97865.t1 |
chr7.2 | exon | 92086976 | 92087205 | 92086976 | ID=MS.gene97865.t1.exon8;Parent=MS.gene97865.t1 |
chr7.2 | CDS | 92086976 | 92087205 | 92086976 | ID=cds.MS.gene97865.t1;Parent=MS.gene97865.t1 |
Gene Sequence |
Protein sequence |