AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050496


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050496.t1 MTR_7g114490 94.688 433 23 0 1 433 1 433 0.0 866
MS.gene050496.t1 MTR_7g114560 83.820 445 72 0 1 445 1 445 0.0 798
MS.gene050496.t1 MTR_7g114550 81.798 445 81 0 1 445 1 445 0.0 788
MS.gene050496.t1 MTR_5g076700 77.803 446 98 1 1 445 1 446 0.0 740
MS.gene050496.t1 MTR_7g114520 77.578 446 98 2 2 445 3 448 0.0 735
MS.gene050496.t1 MTR_7g114470 76.233 446 104 2 2 445 3 448 0.0 730
MS.gene050496.t1 MTR_1g040195 56.264 439 161 6 6 441 5 415 6.32e-177 502
MS.gene050496.t1 MTR_1g040175 54.338 438 196 4 6 441 5 440 3.59e-174 496
MS.gene050496.t1 MTR_1g081660 56.180 445 190 4 3 445 11 452 6.27e-174 495
MS.gene050496.t1 MTR_1g040215 54.442 439 194 5 6 441 5 440 2.66e-173 494
MS.gene050496.t1 MTR_7g114510 74.247 299 76 1 148 445 8 306 5.11e-169 477
MS.gene050496.t1 MTR_1g040320 52.403 437 170 4 6 441 5 404 5.55e-160 458
MS.gene050496.t1 MTR_1g040315 49.545 440 176 6 6 444 5 399 9.46e-147 424
MS.gene050496.t1 MTR_7g114420 65.480 281 69 2 166 445 1 254 3.07e-131 379
MS.gene050496.t1 MTR_0042s0190 54.643 280 119 5 166 441 1 276 2.80e-99 299
MS.gene050496.t1 MTR_0502s0010 55.144 243 102 4 101 340 1 239 1.83e-86 264
MS.gene050496.t1 MTR_7g114500 80.921 152 29 0 1 152 1 152 2.91e-85 258
MS.gene050496.t1 MTR_3g051790 77.027 148 34 0 1 148 4 151 1.64e-78 241
MS.gene050496.t1 MTR_0042s0190 56.132 212 90 3 232 441 1 211 2.77e-76 238
MS.gene050496.t1 MTR_3g098980 33.566 429 266 9 10 433 14 428 3.23e-73 237
MS.gene050496.t1 MTR_8g096530 33.933 389 242 9 8 390 5 384 2.10e-72 235
MS.gene050496.t1 MTR_7g027175 33.073 384 246 6 13 392 19 395 6.33e-70 228
MS.gene050496.t1 MTR_0042s0230 63.636 143 52 0 6 148 5 147 1.68e-64 204
MS.gene050496.t1 MTR_8g039950 62.992 127 47 0 3 129 2 128 2.57e-57 185
MS.gene050496.t1 MTR_3g112180 31.633 392 241 11 18 396 20 397 9.18e-56 191
MS.gene050496.t1 MTR_1g053315 30.405 444 285 14 8 437 24 457 7.30e-53 184
MS.gene050496.t1 MTR_2g105330 28.571 441 290 12 6 435 1 427 1.65e-46 166
MS.gene050496.t1 MTR_4g007540 29.227 414 250 11 42 433 34 426 5.93e-46 165
MS.gene050496.t1 MTR_4g055170 28.859 447 281 15 17 438 19 453 8.58e-46 165
MS.gene050496.t1 MTR_2g064495 28.345 441 291 12 6 435 1 427 1.82e-45 163
MS.gene050496.t1 MTR_3g035000 42.152 223 100 5 200 420 43 238 2.32e-44 157
MS.gene050496.t1 MTR_3g071320 28.989 445 285 13 9 436 4 434 9.84e-44 159
MS.gene050496.t1 MTR_8g075610 27.546 432 286 12 17 437 1 416 1.05e-41 153
MS.gene050496.t1 MTR_7g110610 26.980 404 206 13 6 390 1 334 1.62e-37 141
MS.gene050496.t1 MTR_2g015430 28.706 425 271 13 31 434 25 438 3.13e-36 139
MS.gene050496.t1 MTR_7g085930 28.035 453 266 18 17 428 13 446 3.49e-36 139
MS.gene050496.t1 MTR_7g085990 27.212 452 273 16 16 428 8 442 1.01e-35 137
MS.gene050496.t1 MTR_4g127650 26.573 429 273 13 36 435 35 450 3.68e-35 136
MS.gene050496.t1 MTR_3g465930 28.079 406 266 12 4 389 6 405 3.35e-34 133
MS.gene050496.t1 MTR_3g026950 26.034 411 259 11 18 394 10 409 8.48e-34 132
MS.gene050496.t1 MTR_3g049150 25.439 456 278 15 18 435 10 441 5.01e-32 127
MS.gene050496.t1 MTR_3g465910 28.713 404 263 13 4 389 6 402 5.91e-32 128
MS.gene050496.t1 MTR_3g465990 29.545 396 245 15 17 389 17 401 9.24e-32 126
MS.gene050496.t1 MTR_7g086000 26.427 473 275 21 18 441 12 460 1.42e-31 126
MS.gene050496.t1 MTR_4g097090 25.058 431 278 13 36 435 34 450 1.44e-31 125
MS.gene050496.t1 MTR_3g465980 29.873 395 245 14 17 389 17 401 2.36e-30 122
MS.gene050496.t1 MTR_6g053810 26.895 409 259 17 60 440 66 462 4.74e-30 122
MS.gene050496.t1 MTR_7g084940 25.189 397 278 10 3 390 8 394 6.18e-30 121
MS.gene050496.t1 MTR_7g084910 26.234 385 246 11 17 390 24 381 1.16e-29 120
MS.gene050496.t1 MTR_5g090810 24.169 451 296 15 8 425 8 445 6.29e-26 110
MS.gene050496.t1 MTR_3g465880 27.214 463 283 17 17 440 17 464 6.31e-26 110
MS.gene050496.t1 MTR_5g090830 24.612 451 294 15 8 425 8 445 9.20e-26 109
MS.gene050496.t1 MTR_3g465950 27.859 341 219 10 17 339 17 348 4.18e-25 107
MS.gene050496.t1 MTR_5g090880 24.121 398 260 12 62 428 64 450 4.28e-24 104
MS.gene050496.t1 MTR_8g041770 23.991 446 271 17 24 440 31 437 9.23e-24 103
MS.gene050496.t1 MTR_7g056087 23.918 439 298 14 17 435 11 433 8.82e-23 100
MS.gene050496.t1 MTR_7g114417 81.818 55 9 1 90 143 29 83 1.15e-22 92.0
MS.gene050496.t1 MTR_7g114417 83.333 42 7 0 1 42 1 42 5.78e-16 73.2
MS.gene050496.t1 MTR_3g465870 30.000 280 179 8 17 283 19 294 1.93e-22 99.4
MS.gene050496.t1 MTR_3g051820 64.935 77 27 0 369 445 2 78 3.90e-22 90.9
MS.gene050496.t1 MTR_4g013050 23.291 395 243 10 20 394 14 368 1.21e-21 97.1
MS.gene050496.t1 MTR_3g450710 24.130 431 282 14 43 441 43 460 2.59e-21 96.7
MS.gene050496.t1 MTR_3g450690 24.444 405 266 11 65 441 72 464 9.40e-21 94.7
MS.gene050496.t1 MTR_3g101960 26.862 443 268 19 24 439 30 443 1.29e-20 94.4
MS.gene050496.t1 MTR_3g070170 25.175 429 258 15 54 439 55 463 1.95e-20 94.0
MS.gene050496.t1 MTR_5g084870 24.752 404 240 18 16 390 9 377 5.56e-20 92.4
MS.gene050496.t1 MTR_5g026320 25.313 399 255 14 25 399 35 414 2.16e-19 90.5
MS.gene050496.t1 MTR_8g079980 23.340 467 263 21 16 438 9 424 2.86e-19 90.1
MS.gene050496.t1 MTR_4g022800 26.500 400 243 19 24 397 25 399 7.96e-19 89.0
MS.gene050496.t1 MTR_1g094790 23.185 427 269 15 16 408 9 410 1.22e-18 88.2
MS.gene050496.t1 MTR_3g102020 25.057 435 269 19 25 430 31 437 2.28e-18 87.4
MS.gene050496.t1 MTR_8g079970 24.670 454 272 19 16 437 9 424 4.08e-18 86.7
MS.gene050496.t1 MTR_4g022670 24.717 441 272 19 24 436 25 433 6.68e-18 85.9
MS.gene050496.t1 MTR_3g088420 24.099 444 271 20 24 440 25 429 2.61e-17 84.0
MS.gene050496.t1 MTR_3g101970 24.113 423 276 14 24 430 30 423 5.28e-17 83.2
MS.gene050496.t1 MTR_4g088765 44.000 75 42 0 6 80 5 79 6.68e-17 77.0
MS.gene050496.t1 MTR_8g467580 22.300 426 265 18 45 435 39 433 1.09e-16 82.4
MS.gene050496.t1 MTR_3g101900 25.445 393 236 17 37 399 44 409 1.13e-16 82.4
MS.gene050496.t1 MTR_0190s0020 23.077 403 267 13 24 407 30 408 2.03e-16 81.6
MS.gene050496.t1 MTR_4g094835 22.272 449 280 17 24 441 33 443 5.20e-16 80.1
MS.gene050496.t1 MTR_3g102010 24.263 441 264 18 25 430 32 437 1.23e-15 79.3
MS.gene050496.t1 MTR_4g022760 26.073 303 188 14 24 309 25 308 1.93e-15 78.2
MS.gene050496.t1 MTR_8g079950 28.488 172 105 6 16 180 9 169 3.06e-15 77.8
MS.gene050496.t1 MTR_2g089670 21.798 367 229 12 62 387 79 428 5.86e-14 73.9
MS.gene050496.t1 MTR_4g094832 22.778 360 242 13 95 438 85 424 1.11e-13 73.2
MS.gene050496.t1 MTR_4g094828 22.426 437 289 17 25 436 31 442 1.85e-13 72.4
MS.gene050496.t1 MTR_5g084900 24.432 352 186 15 62 390 6 300 6.85e-13 70.1
MS.gene050496.t1 MTR_6g016815 24.915 293 180 12 60 317 64 351 1.34e-12 69.3
MS.gene050496.t1 MTR_3g026310 24.451 319 206 11 24 323 25 327 2.10e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050496.t1 AT5G17540 49.217 447 217 8 3 444 2 443 1.76e-146 426
MS.gene050496.t1 AT3G03480 47.309 446 224 8 2 442 11 450 1.54e-140 410
MS.gene050496.t1 AT3G48720 33.933 389 246 9 8 392 7 388 1.95e-74 239
MS.gene050496.t1 AT5G63560 35.567 388 233 9 10 392 9 384 1.13e-69 227
MS.gene050496.t1 AT5G41040 33.419 389 246 7 10 392 17 398 2.69e-69 227
MS.gene050496.t1 AT5G41040 33.419 389 246 7 10 392 33 414 2.82e-69 227
MS.gene050496.t1 AT1G27620 32.234 394 243 11 13 396 12 391 8.42e-57 194
MS.gene050496.t1 AT1G03390 31.555 431 270 14 8 425 23 441 4.77e-52 182
MS.gene050496.t1 AT5G48930 28.864 440 281 13 17 440 10 433 6.27e-47 167
MS.gene050496.t1 AT2G19070 30.115 435 259 15 36 439 29 449 6.23e-46 165
MS.gene050496.t1 AT2G40230 30.591 389 249 12 17 393 12 391 3.39e-43 157
MS.gene050496.t1 AT3G62160 27.273 407 241 12 6 390 1 374 1.97e-40 150
MS.gene050496.t1 AT5G57840 28.228 457 284 14 10 442 3 439 2.26e-39 147
MS.gene050496.t1 AT1G28680 27.896 423 286 11 31 440 27 443 4.07e-39 147
MS.gene050496.t1 AT1G28680 29.762 336 223 9 31 359 27 356 5.72e-36 137
MS.gene050496.t1 AT1G65450 27.764 407 265 12 3 391 8 403 1.54e-35 137
MS.gene050496.t1 AT5G07080 27.644 416 253 15 3 389 7 403 2.51e-33 130
MS.gene050496.t1 AT3G47170 25.106 470 303 17 8 441 10 466 7.60e-31 124
MS.gene050496.t1 AT2G25150 29.257 417 240 19 5 389 7 400 1.17e-28 117
MS.gene050496.t1 AT2G23510 28.395 405 260 17 2 389 7 398 4.39e-28 116
MS.gene050496.t1 AT1G31490 24.510 408 261 12 7 391 3 386 2.14e-25 108
MS.gene050496.t1 AT3G50280 26.750 400 247 16 24 399 28 405 1.91e-24 105
MS.gene050496.t1 AT1G32910 25.745 369 237 12 63 409 63 416 2.83e-23 102
MS.gene050496.t1 AT4G31910 25.397 441 288 17 26 437 27 455 2.11e-22 99.8
MS.gene050496.t1 AT1G78990 23.923 418 282 11 43 441 45 445 3.68e-22 99.0
MS.gene050496.t1 AT3G26040 23.691 401 256 15 16 392 9 383 7.49e-22 97.8
MS.gene050496.t1 AT1G24430 24.760 416 259 15 44 441 41 420 3.17e-21 95.9
MS.gene050496.t1 AT5G67150 27.273 396 246 16 24 399 30 403 1.05e-20 94.7
MS.gene050496.t1 AT5G42830 26.087 460 273 20 14 439 16 442 1.26e-19 91.3
MS.gene050496.t1 AT5G16410 24.207 347 229 12 65 392 91 422 4.65e-19 89.7
MS.gene050496.t1 AT4G15390 22.921 445 290 17 16 435 14 430 1.44e-18 88.2
MS.gene050496.t1 AT4G15390 22.921 445 290 17 16 435 14 430 1.44e-18 88.2
MS.gene050496.t1 AT1G24420 23.622 381 211 11 76 422 76 410 6.90e-18 85.9
MS.gene050496.t1 AT1G24420 23.622 381 211 11 76 422 76 410 6.90e-18 85.9
MS.gene050496.t1 AT2G39980 23.934 422 254 12 62 430 59 466 1.52e-17 85.1
MS.gene050496.t1 AT5G07850 25.541 462 280 18 14 440 17 449 3.54e-17 84.0
MS.gene050496.t1 AT5G07860 24.444 450 292 16 14 439 17 442 6.87e-17 83.2
MS.gene050496.t1 AT3G30280 22.430 428 289 15 16 422 12 417 1.30e-15 79.0
MS.gene050496.t1 AT5G47950 26.316 266 165 9 16 275 12 252 2.85e-15 77.8
MS.gene050496.t1 AT5G23970 24.242 396 249 14 16 390 9 374 2.91e-13 71.6
MS.gene050496.t1 AT5G23940 26.738 374 223 17 52 393 53 407 4.69e-13 71.2
MS.gene050496.t1 AT3G50280 24.275 276 184 10 139 399 10 275 5.55e-13 70.1
MS.gene050496.t1 AT1G65450 24.068 295 199 9 160 441 3 285 1.74e-12 68.2
MS.gene050496.t1 AT3G50300 24.033 362 239 12 62 399 56 405 6.40e-12 67.8
MS.gene050496.t1 AT1G03495 23.529 306 201 12 47 324 46 346 9.65e-12 66.6

Find 106 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATGTCTAAGAACTTTAAT+AGG 0.218647 7.2:+2942144 None:intergenic
AGCAGATCTTATGGTTATTA+AGG 0.242062 7.2:-2939587 MS.gene050496:CDS
AAGTTCAAAGAAGTGGATTT+TGG 0.248604 7.2:-2939508 MS.gene050496:CDS
ATGTAACACTTGATCAATTT+GGG 0.256344 7.2:-2942002 MS.gene050496:CDS
ATCCCACATAAGAATGTAAA+AGG 0.288527 7.2:-2939415 MS.gene050496:CDS
GATGTAACACTTGATCAATT+TGG 0.298925 7.2:-2942003 MS.gene050496:CDS
ATCCATTTGCAGGAAGGATT+AGG 0.320371 7.2:-2942095 MS.gene050496:CDS
CCATTCAACCTGTATGGAAT+AGG 0.323735 7.2:-2940068 MS.gene050496:CDS
GCATTCTGTAGCAGATCTTA+TGG 0.324794 7.2:-2939596 MS.gene050496:CDS
TCCATTTGCAGGAAGGATTA+GGG 0.331515 7.2:-2942094 MS.gene050496:CDS
TCGCCACTTGTTGGATATTA+CGG 0.334686 7.2:-2939736 MS.gene050496:CDS
CATAGCTGCGCTTCGTCTCT+TGG 0.337255 7.2:-2939908 MS.gene050496:CDS
AAGCTTTGTGGAAACTCATT+AGG 0.345233 7.2:-2939673 MS.gene050496:CDS
CCCGCGGTGGTGACAGCTGC+CGG 0.349688 7.2:+2939697 None:intergenic
GCAGCTGGTGGCACCAGCTC+TGG 0.355758 7.2:+2942282 None:intergenic
GTGTATTACTATCCATTTGC+AGG 0.355829 7.2:-2942105 MS.gene050496:CDS
CACAAAAGCATTGCAGTTAG+AGG 0.365161 7.2:-2939821 MS.gene050496:CDS
ATTCTTATGTGGGATGATAT+AGG 0.365851 7.2:+2939423 None:intergenic
GGATGGGGTGAGGCGGTGTA+TGG 0.375232 7.2:-2939487 MS.gene050496:CDS
GGGTGCTGGGCGTAAGTTGA+TGG 0.381264 7.2:-2942070 MS.gene050496:CDS
CATGAATGCCTGGGCAGAAA+TGG 0.382624 7.2:-2940112 MS.gene050496:CDS
CTCCGCACTGTGAACAATAA+TGG 0.390252 7.2:+2942312 None:intergenic
CATGTCTAAGAACTTTAATA+GGG 0.395837 7.2:+2942145 None:intergenic
CATTCAACCTGTATGGAATA+GGG 0.408225 7.2:-2940067 MS.gene050496:CDS
TCCCTAATCCTTCCTGCAAA+TGG 0.413944 7.2:+2942093 None:intergenic
GTTCTTTGAAGCATGGGAAT+GGG 0.414516 7.2:+2941965 None:intergenic
AACCTTCCATTCAACCTGTA+TGG 0.427456 7.2:-2940074 MS.gene050496:CDS
GGAAGGATTAGGGAGGGTGC+TGG 0.433324 7.2:-2942084 MS.gene050496:CDS
CGTAGTATCTTCTTCCTTGA+CGG 0.435537 7.2:+2939969 None:intergenic
TGAAACTATTCATGAATGCC+TGG 0.438374 7.2:-2940122 MS.gene050496:CDS
GAACTTCTATACGATGTTCC+AGG 0.439564 7.2:-2941946 MS.gene050496:CDS
TTTACCTGTATGAGTCGAAT+GGG 0.448569 7.2:+2941901 None:intergenic
CAGCTCCATCGCTCATTGTA+TGG 0.451440 7.2:+2940148 None:intergenic
CCTATTCCATACAGGTTGAA+TGG 0.453015 7.2:+2940068 None:intergenic
ACCACCGCGGGGAAGCTTTG+TGG 0.458585 7.2:-2939685 MS.gene050496:CDS
CTGGTGGCACCAGCTCTGGT+TGG 0.466144 7.2:+2942286 None:intergenic
TGACGATAGATAAACATCAT+AGG 0.470860 7.2:+2942192 None:intergenic
AAGAATGTAAAAGGAGAAGA+AGG 0.472789 7.2:-2939406 MS.gene050496:CDS
TCCTCGAGCCATTTCTGCCC+AGG 0.474546 7.2:+2940104 None:intergenic
AGAATCTCCCTATTCCATAC+AGG 0.480630 7.2:+2940060 None:intergenic
TCAATAATTAGTTCTGATCC+TGG 0.483822 7.2:+2941928 None:intergenic
TTCCATACAGGTTGAATGGA+AGG 0.484244 7.2:+2940072 None:intergenic
GTCAACCATTCGCCACTTGT+TGG 0.484423 7.2:-2939745 MS.gene050496:CDS
AGTTCTTTGAAGCATGGGAA+TGG 0.487665 7.2:+2941964 None:intergenic
ATATAGGCTGCTCCAGGAAA+AGG 0.487690 7.2:+2939439 None:intergenic
TGGGGTGAGGCGGTGTATGG+TGG 0.491453 7.2:-2939484 MS.gene050496:CDS
GCGGAGGAGCCAACCAGAGC+TGG 0.493190 7.2:-2942295 MS.gene050496:CDS
CCGCCCCATTCGACTCATAC+AGG 0.494546 7.2:-2941905 MS.gene050496:intron
AAATATGTTCGTATTCATGA+TGG 0.495591 7.2:+2940004 None:intergenic
CCGGCAGCTGTCACCACCGC+GGG 0.498263 7.2:-2939697 MS.gene050496:CDS
ATGGAATAGGGAGATTCTAA+TGG 0.500842 7.2:-2940055 MS.gene050496:CDS
TCGTATAAAGTTCAAAGAAG+TGG 0.508593 7.2:-2939515 MS.gene050496:CDS
TAGTTTAACTTCACGAGGAG+TGG 0.511679 7.2:+2942257 None:intergenic
TATAGAAGTTCTTTGAAGCA+TGG 0.512144 7.2:+2941958 None:intergenic
GAAGGATTAGGGAGGGTGCT+GGG 0.520089 7.2:-2942083 MS.gene050496:CDS
TTCTTTGAAGCATGGGAATG+GGG 0.526135 7.2:+2941966 None:intergenic
CCGCGGTGGTGACAGCTGCC+GGG 0.534362 7.2:+2939698 None:intergenic
ATAGAAGTTCTTTGAAGCAT+GGG 0.535113 7.2:+2941959 None:intergenic
AAACCTCTTCATATCTTCAA+AGG 0.555864 7.2:+2939360 None:intergenic
ATGGTGGATTGTACTGGTGA+GGG 0.557820 7.2:-2942051 MS.gene050496:CDS
GAAACTATTCATGAATGCCT+GGG 0.560588 7.2:-2940121 MS.gene050496:CDS
ATTACTATCCATTTGCAGGA+AGG 0.563934 7.2:-2942101 MS.gene050496:CDS
ATCTTATGGTTATTAAGGAA+CGG 0.564453 7.2:-2939582 MS.gene050496:CDS
ATTAGGTTATGCTGTGGAGT+TGG 0.566011 7.2:-2939656 MS.gene050496:CDS
AGAAGAAAGATTGATGAACC+AGG 0.568559 7.2:+2939944 None:intergenic
GGTTGCATGTAATGTGTGGT+GGG 0.570054 7.2:+2940025 None:intergenic
GATGGTGGATTGTACTGGTG+AGG 0.570539 7.2:-2942052 MS.gene050496:CDS
TCACGAGGAGTGGAAGCAGC+TGG 0.571211 7.2:+2942267 None:intergenic
GGTGTTTATTTACAACTACA+AGG 0.572054 7.2:-2939561 MS.gene050496:CDS
TCCACAAAGCTTCCCCGCGG+TGG 0.581894 7.2:+2939684 None:intergenic
AAGTTGATGGTGGATTGTAC+TGG 0.588782 7.2:-2942057 MS.gene050496:CDS
TGTCCTTTGAAGATATGAAG+AGG 0.589462 7.2:-2939363 MS.gene050496:CDS
TGGTTGCATGTAATGTGTGG+TGG 0.590063 7.2:+2940024 None:intergenic
AAAGAGTTAGATGAGATGCT+TGG 0.590438 7.2:-2939334 MS.gene050496:CDS
GGGATGATATAGGCTGCTCC+AGG 0.591783 7.2:+2939433 None:intergenic
GGAAGAAGATACTACGACCC+TGG 0.596612 7.2:-2939962 MS.gene050496:CDS
GCATGAAACCACCGCACTTG+AGG 0.601841 7.2:+2940187 None:intergenic
TTGAACCATACAATGAGCGA+TGG 0.603418 7.2:-2940153 MS.gene050496:CDS
GTACAATGACGAAGGTGAGA+TGG 0.604232 7.2:+2939883 None:intergenic
TGCTGGGCGTAAGTTGATGG+TGG 0.605454 7.2:-2942067 MS.gene050496:CDS
CATACAATGAGCGATGGAGC+TGG 0.610758 7.2:-2940147 MS.gene050496:CDS
TCTTTGAAGCATGGGAATGG+GGG 0.613320 7.2:+2941967 None:intergenic
AATATCCAACAAGTGGCGAA+TGG 0.616842 7.2:+2939740 None:intergenic
GAAGAAAGATTGATGAACCA+GGG 0.619057 7.2:+2939945 None:intergenic
TTACCGTAATATCCAACAAG+TGG 0.632459 7.2:+2939733 None:intergenic
ATTAAAAGCTGAAGTTACAG+AGG 0.635766 7.2:-2939626 MS.gene050496:CDS
TGTAACACTTGATCAATTTG+GGG 0.637489 7.2:-2942001 MS.gene050496:CDS
TCTGACATAGATGATCAAGA+AGG 0.638298 7.2:-2942231 MS.gene050496:CDS
CGAGGAGTGGAAGCAGCTGG+TGG 0.639794 7.2:+2942270 None:intergenic
CATTATTGTTCACAGTGCGG+AGG 0.651919 7.2:-2942311 MS.gene050496:CDS
GCCTGGGCAGAAATGGCTCG+AGG 0.654434 7.2:-2940105 MS.gene050496:CDS
CCCGGCAGCTGTCACCACCG+CGG 0.658344 7.2:-2939698 MS.gene050496:CDS
GCATCGTCAATGCACGCTCG+AGG 0.662333 7.2:-2939774 MS.gene050496:CDS
TTTGCAGGAAGGATTAGGGA+GGG 0.663911 7.2:-2942090 MS.gene050496:CDS
AAACTCATTAGGTTATGCTG+TGG 0.666130 7.2:-2939662 MS.gene050496:CDS
GATAATAGTTTAACTTCACG+AGG 0.669478 7.2:+2942252 None:intergenic
TTACCTGTATGAGTCGAATG+GGG 0.671022 7.2:+2941902 None:intergenic
CACCATTATTGTTCACAGTG+CGG 0.673411 7.2:-2942314 MS.gene050496:CDS
ATTTGCAGGAAGGATTAGGG+AGG 0.677174 7.2:-2942091 MS.gene050496:CDS
TGATGGTTGCATGTAATGTG+TGG 0.678806 7.2:+2940021 None:intergenic
GTGACACGCCTCAAGTGCGG+TGG 0.681359 7.2:-2940195 MS.gene050496:CDS
CCTGTATGAGTCGAATGGGG+CGG 0.682735 7.2:+2941905 None:intergenic
TAGGTGACACGCCTCAAGTG+CGG 0.682839 7.2:-2940198 MS.gene050496:CDS
CGAATGTCGTACAATGACGA+AGG 0.701737 7.2:+2939875 None:intergenic
CGGCAGCTGTCACCACCGCG+GGG 0.749713 7.2:-2939696 MS.gene050496:CDS
GTTTCCACAAAGCTTCCCCG+CGG 0.764073 7.2:+2939681 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTATAAATTAAAAAA+TGG - chr7.2:2940608-2940627 MS.gene050496:intron 0.0%
!! ACTATATATAAAAAACATAA+GGG + chr7.2:2941374-2941393 None:intergenic 10.0%
!! TACTATATATAAAAAACATA+AGG + chr7.2:2941375-2941394 None:intergenic 10.0%
!!! ACATTTTAAGATATTATATT+TGG + chr7.2:2940405-2940424 None:intergenic 10.0%
!! AAAAGTTATGTAAATTAACA+TGG - chr7.2:2940492-2940511 MS.gene050496:intron 15.0%
!! AAAGTTATGTAAATTAACAT+GGG - chr7.2:2940493-2940512 MS.gene050496:intron 15.0%
!! ATGTATAAGTGATTTAAATT+TGG - chr7.2:2940421-2940440 MS.gene050496:intron 15.0%
!! TAAACCCTATTTAAAAAAAT+TGG - chr7.2:2940377-2940396 MS.gene050496:intron 15.0%
!! TAATACATGTAAATTATGAA+CGG - chr7.2:2941143-2941162 MS.gene050496:intron 15.0%
!! TATAACATATATCTTGATAT+TGG - chr7.2:2941411-2941430 MS.gene050496:intron 15.0%
!! TGTATAAGTGATTTAAATTT+GGG - chr7.2:2940422-2940441 MS.gene050496:intron 15.0%
!!! CTCTAATCTAAAATAAAAAA+AGG - chr7.2:2940866-2940885 MS.gene050496:intron 15.0%
!!! CTTTTTTTATTTTAGATTAG+AGG + chr7.2:2940868-2940887 None:intergenic 15.0%
!!! TATTATATTTGCTATATTGT+TGG + chr7.2:2941270-2941289 None:intergenic 15.0%
!!! TTTTTTTTATAATATGTTCC+AGG - chr7.2:2939839-2939858 MS.gene050496:CDS 15.0%
!! ATTCCATTTCAAAAAATTTG+TGG + chr7.2:2940329-2940348 None:intergenic 20.0%
!! GTATAAGTGATTTAAATTTG+GGG - chr7.2:2940423-2940442 MS.gene050496:intron 20.0%
!! TATTGGATTCAAAATATGAT+AGG - chr7.2:2941428-2941447 MS.gene050496:intron 20.0%
!!! AAATTTGTTCTGTTTATAAC+TGG - chr7.2:2941335-2941354 MS.gene050496:intron 20.0%
!!! ATAAAAAACATAAGGGATTT+TGG + chr7.2:2941367-2941386 None:intergenic 20.0%
!!! ATTGGAATATACGATTTTTT+TGG + chr7.2:2940158-2940177 None:intergenic 20.0%
!!! ATTTTTTTTAGAGGATGTTT+AGG - chr7.2:2940678-2940697 MS.gene050496:intron 20.0%
!!! GGATCCAATTTTTTTAAATA+GGG + chr7.2:2940384-2940403 None:intergenic 20.0%
!!! GTTTATGCAATTTTTTTTAG+AGG - chr7.2:2940669-2940688 MS.gene050496:intron 20.0%
!!! TAAAAAACATAAGGGATTTT+GGG + chr7.2:2941366-2941385 None:intergenic 20.0%
!!! TGATTTTCATGTAAAAAAGA+CGG - chr7.2:2941083-2941102 MS.gene050496:intron 20.0%
!!! TGGATCCAATTTTTTTAAAT+AGG + chr7.2:2940385-2940404 None:intergenic 20.0%
! AAATATGTTCGTATTCATGA+TGG + chr7.2:2941644-2941663 None:intergenic 25.0%
! AGTGAGTATGTCAAATTTAT+TGG + chr7.2:2939818-2939837 None:intergenic 25.0%
! ATCTTATGGTTATTAAGGAA+CGG - chr7.2:2942063-2942082 MS.gene050496:CDS 25.0%
! ATGTAACACTTGATCAATTT+GGG - chr7.2:2939643-2939662 MS.gene050496:CDS 25.0%
! CATCTGTAACAACATAAAAT+TGG + chr7.2:2940176-2940195 None:intergenic 25.0%
! CATGTCTAAGAACTTTAATA+GGG + chr7.2:2939503-2939522 None:intergenic 25.0%
! TATTAGCGCAATAAAAAGAA+CGG + chr7.2:2941128-2941147 None:intergenic 25.0%
!! ATCTTATCACTTCATGTTTT+TGG - chr7.2:2941793-2941812 MS.gene050496:intron 25.0%
!! CAAAATCACATCAATTTTCT+AGG - chr7.2:2940747-2940766 MS.gene050496:intron 25.0%
AAACCTCTTCATATCTTCAA+AGG + chr7.2:2942288-2942307 None:intergenic 30.0%
AAGAATGTAAAAGGAGAAGA+AGG - chr7.2:2942239-2942258 MS.gene050496:CDS 30.0%
AGCAGATCTTATGGTTATTA+AGG - chr7.2:2942058-2942077 MS.gene050496:CDS 30.0%
ATCCCACATAAGAATGTAAA+AGG - chr7.2:2942230-2942249 MS.gene050496:CDS 30.0%
ATCTTTAAGCAACTCTTTAG+AGG + chr7.2:2940236-2940255 None:intergenic 30.0%
ATTAAAAGCTGAAGTTACAG+AGG - chr7.2:2942019-2942038 MS.gene050496:CDS 30.0%
ATTCTTATGTGGGATGATAT+AGG + chr7.2:2942225-2942244 None:intergenic 30.0%
GATGTAACACTTGATCAATT+TGG - chr7.2:2939642-2939661 MS.gene050496:CDS 30.0%
GCATGTCTAAGAACTTTAAT+AGG + chr7.2:2939504-2939523 None:intergenic 30.0%
GGTGTTTATTTACAACTACA+AGG - chr7.2:2942084-2942103 MS.gene050496:CDS 30.0%
GTCATCGTAAAAGAAAAACA+TGG + chr7.2:2941246-2941265 None:intergenic 30.0%
TATGTAATTAGTTCAGATCC+TGG + chr7.2:2939860-2939879 None:intergenic 30.0%
TCGTATAAAGTTCAAAGAAG+TGG - chr7.2:2942130-2942149 MS.gene050496:CDS 30.0%
TGACGATAGATAAACATCAT+AGG + chr7.2:2939456-2939475 None:intergenic 30.0%
TGTAACACTTGATCAATTTG+GGG - chr7.2:2939644-2939663 MS.gene050496:CDS 30.0%
TTTATGTTGTTACAGATGCA+TGG - chr7.2:2940178-2940197 MS.gene050496:CDS 30.0%
! CTCCTTTTACATTCTTATGT+GGG + chr7.2:2942235-2942254 None:intergenic 30.0%
! GATAATAGTTTAACTTCACG+AGG + chr7.2:2939396-2939415 None:intergenic 30.0%
! GTCATCTTTTGTTAAAGGTT+TGG + chr7.2:2940214-2940233 None:intergenic 30.0%
! TAGAGGTCATCTTTTGTTAA+AGG + chr7.2:2940219-2940238 None:intergenic 30.0%
! TCTCCTTTTACATTCTTATG+TGG + chr7.2:2942236-2942255 None:intergenic 30.0%
!! AAGTTCAAAGAAGTGGATTT+TGG - chr7.2:2942137-2942156 MS.gene050496:CDS 30.0%
!! ATAGAAGTTCTTTGAAGCAT+GGG + chr7.2:2939689-2939708 None:intergenic 30.0%
!! TATAGAAGTTCTTTGAAGCA+TGG + chr7.2:2939690-2939709 None:intergenic 30.0%
!! TCAATAATTAGTTCTGATCC+TGG + chr7.2:2939720-2939739 None:intergenic 30.0%
!!! GCTCCACAAATTTTTTGAAA+TGG - chr7.2:2940323-2940342 MS.gene050496:intron 30.0%
!!! GGGTTTTTTTCTTTCATTGA+CGG + chr7.2:2939483-2939502 None:intergenic 30.0%
AAACTCATTAGGTTATGCTG+TGG - chr7.2:2941983-2942002 MS.gene050496:CDS 35.0%
AAAGAGTTAGATGAGATGCT+TGG - chr7.2:2942311-2942330 MS.gene050496:CDS 35.0%
ACATGAGAAATCAACATGCA+TGG - chr7.2:2940810-2940829 MS.gene050496:intron 35.0%
AGAAGAAAGATTGATGAACC+AGG + chr7.2:2941704-2941723 None:intergenic 35.0%
ATGGAATAGGGAGATTCTAA+TGG - chr7.2:2941590-2941609 MS.gene050496:intron 35.0%
ATTACTATCCATTTGCAGGA+AGG - chr7.2:2939544-2939563 MS.gene050496:CDS 35.0%
CATTCAACCTGTATGGAATA+GGG - chr7.2:2941578-2941597 MS.gene050496:intron 35.0%
GAAACTATTCATGAATGCCT+GGG - chr7.2:2941524-2941543 MS.gene050496:intron 35.0%
GAAGAAAGATTGATGAACCA+GGG + chr7.2:2941703-2941722 None:intergenic 35.0%
GAATGCGATAATTGAAACGT+AGG + chr7.2:2939796-2939815 None:intergenic 35.0%
GTGTATTACTATCCATTTGC+AGG - chr7.2:2939540-2939559 MS.gene050496:CDS 35.0%
TCTGACATAGATGATCAAGA+AGG - chr7.2:2939414-2939433 MS.gene050496:CDS 35.0%
TGAAACTATTCATGAATGCC+TGG - chr7.2:2941523-2941542 MS.gene050496:intron 35.0%
TTACCGTAATATCCAACAAG+TGG + chr7.2:2941915-2941934 None:intergenic 35.0%
TTTACCTGTATGAGTCGAAT+GGG + chr7.2:2939747-2939766 None:intergenic 35.0%
! AAGCTTTGTGGAAACTCATT+AGG - chr7.2:2941972-2941991 MS.gene050496:CDS 35.0%
! TGTCCTTTGAAGATATGAAG+AGG - chr7.2:2942282-2942301 MS.gene050496:CDS 35.0%
! TTTTACCTGTATGAGTCGAA+TGG + chr7.2:2939748-2939767 None:intergenic 35.0%
! TTTTTCGTCAAATACCGTCA+AGG - chr7.2:2941662-2941681 MS.gene050496:intron 35.0%
!! AAAGAAGTGGATTTTGGATG+GGG - chr7.2:2942143-2942162 MS.gene050496:CDS 35.0%
!! CAAAGAAGTGGATTTTGGAT+GGG - chr7.2:2942142-2942161 MS.gene050496:CDS 35.0%
!! TCAAAGAAGTGGATTTTGGA+TGG - chr7.2:2942141-2942160 MS.gene050496:CDS 35.0%
AACCTTCCATTCAACCTGTA+TGG - chr7.2:2941571-2941590 MS.gene050496:intron 40.0%
AATATCCAACAAGTGGCGAA+TGG + chr7.2:2941908-2941927 None:intergenic 40.0%
AGAATCTCCCTATTCCATAC+AGG + chr7.2:2941588-2941607 None:intergenic 40.0%
ATCCATTTGCAGGAAGGATT+AGG - chr7.2:2939550-2939569 MS.gene050496:CDS 40.0%
ATCGTAAGAATGGTTCAACG+AGG - chr7.2:2941045-2941064 MS.gene050496:intron 40.0%
ATTAGGTTATGCTGTGGAGT+TGG - chr7.2:2941989-2942008 MS.gene050496:CDS 40.0%
CACCATTATTGTTCACAGTG+CGG - chr7.2:2939331-2939350 MS.gene050496:CDS 40.0%
CCATTCAACCTGTATGGAAT+AGG - chr7.2:2941577-2941596 MS.gene050496:intron 40.0%
CGTAGTATCTTCTTCCTTGA+CGG + chr7.2:2941679-2941698 None:intergenic 40.0%
GAACTTCTATACGATGTTCC+AGG - chr7.2:2939699-2939718 MS.gene050496:CDS 40.0%
GCATTCTGTAGCAGATCTTA+TGG - chr7.2:2942049-2942068 MS.gene050496:CDS 40.0%
GTTGAACCATTCTTACGATG+AGG + chr7.2:2941044-2941063 None:intergenic 40.0%
TCCATTTGCAGGAAGGATTA+GGG - chr7.2:2939551-2939570 MS.gene050496:CDS 40.0%
TCGTAAGAATGGTTCAACGA+GGG - chr7.2:2941046-2941065 MS.gene050496:intron 40.0%
TGATGGTTGCATGTAATGTG+TGG + chr7.2:2941627-2941646 None:intergenic 40.0%
TTACCTGTATGAGTCGAATG+GGG + chr7.2:2939746-2939765 None:intergenic 40.0%
TTGAACCATACAATGAGCGA+TGG - chr7.2:2941492-2941511 MS.gene050496:intron 40.0%
! ATGAGTGTACGCCTTTTAAG+TGG - chr7.2:2940278-2940297 MS.gene050496:intron 40.0%
! CCTATTCCATACAGGTTGAA+TGG + chr7.2:2941580-2941599 None:intergenic 40.0%
! CTAACTGCAATGCTTTTGTG+CGG + chr7.2:2941824-2941843 None:intergenic 40.0%
! TAGTTTAACTTCACGAGGAG+TGG + chr7.2:2939391-2939410 None:intergenic 40.0%
! TCGCCACTTGTTGGATATTA+CGG - chr7.2:2941909-2941928 MS.gene050496:CDS 40.0%
! TTCCATACAGGTTGAATGGA+AGG + chr7.2:2941576-2941595 None:intergenic 40.0%
!! AAGTTGATGGTGGATTGTAC+TGG - chr7.2:2939588-2939607 MS.gene050496:CDS 40.0%
!! AGTTCTTTGAAGCATGGGAA+TGG + chr7.2:2939684-2939703 None:intergenic 40.0%
!! CACAAAAGCATTGCAGTTAG+AGG - chr7.2:2941824-2941843 MS.gene050496:intron 40.0%
!! CGGTAATTGTTTTGCTTACC+CGG - chr7.2:2941929-2941948 MS.gene050496:CDS 40.0%
!! GTTCTTTGAAGCATGGGAAT+GGG + chr7.2:2939683-2939702 None:intergenic 40.0%
!! TCAACGAGGGTATTCAGATA+AGG - chr7.2:2941059-2941078 MS.gene050496:intron 40.0%
!! TTCTTTGAAGCATGGGAATG+GGG + chr7.2:2939682-2939701 None:intergenic 40.0%
ATATAGGCTGCTCCAGGAAA+AGG + chr7.2:2942209-2942228 None:intergenic 45.0%
ATTTGCAGGAAGGATTAGGG+AGG - chr7.2:2939554-2939573 MS.gene050496:CDS 45.0%
CATTATTGTTCACAGTGCGG+AGG - chr7.2:2939334-2939353 MS.gene050496:CDS 45.0%
CGAATGTCGTACAATGACGA+AGG + chr7.2:2941773-2941792 None:intergenic 45.0%
CTCCGCACTGTGAACAATAA+TGG + chr7.2:2939336-2939355 None:intergenic 45.0%
GGTTGCATGTAATGTGTGGT+GGG + chr7.2:2941623-2941642 None:intergenic 45.0%
GTACAATGACGAAGGTGAGA+TGG + chr7.2:2941765-2941784 None:intergenic 45.0%
TCCCTAATCCTTCCTGCAAA+TGG + chr7.2:2939555-2939574 None:intergenic 45.0%
TGGTTGCATGTAATGTGTGG+TGG + chr7.2:2941624-2941643 None:intergenic 45.0%
TTTGCAGGAAGGATTAGGGA+GGG - chr7.2:2939555-2939574 MS.gene050496:CDS 45.0%
! ATGGTGGAGCTGCAAAAAGT+GGG - chr7.2:2942177-2942196 MS.gene050496:CDS 45.0%
! TATGGTGGAGCTGCAAAAAG+TGG - chr7.2:2942176-2942195 MS.gene050496:CDS 45.0%
!! AGTGTACGCCTTTTAAGTGG+CGG - chr7.2:2940281-2940300 MS.gene050496:intron 45.0%
!! ATGGTGGATTGTACTGGTGA+GGG - chr7.2:2939594-2939613 MS.gene050496:CDS 45.0%
!! TCTTTGAAGCATGGGAATGG+GGG + chr7.2:2939681-2939700 None:intergenic 45.0%
!!! TTTTATATTTATTATATTGT+TGG + chr7.2:2940045-2940064 None:intergenic 5.0%
CAAGGGCCTCATCGTAAGAA+TGG - chr7.2:2941035-2941054 MS.gene050496:intron 50.0%
CAGCTCCATCGCTCATTGTA+TGG + chr7.2:2941500-2941519 None:intergenic 50.0%
CATACAATGAGCGATGGAGC+TGG - chr7.2:2941498-2941517 MS.gene050496:intron 50.0%
CATGAATGCCTGGGCAGAAA+TGG - chr7.2:2941533-2941552 MS.gene050496:intron 50.0%
GGAAGAAGATACTACGACCC+TGG - chr7.2:2941683-2941702 MS.gene050496:intron 50.0%
GTCAACCATTCGCCACTTGT+TGG - chr7.2:2941900-2941919 MS.gene050496:intron 50.0%
TGGTGGAGCTGCAAAAAGTG+GGG - chr7.2:2942178-2942197 MS.gene050496:CDS 50.0%
!! AGTGGATTTTGGATGGGGTG+AGG - chr7.2:2942148-2942167 MS.gene050496:CDS 50.0%
!! GATGGTGGATTGTACTGGTG+AGG - chr7.2:2939593-2939612 MS.gene050496:CDS 50.0%
CATAGCTGCGCTTCGTCTCT+TGG - chr7.2:2941737-2941756 MS.gene050496:intron 55.0%
CCTGTATGAGTCGAATGGGG+CGG + chr7.2:2939743-2939762 None:intergenic 55.0%
CGGAGCCACACACAACATGA+GGG - chr7.2:2940301-2940320 MS.gene050496:intron 55.0%
CTTACGATGAGGCCCTTGAC+CGG + chr7.2:2941033-2941052 None:intergenic 55.0%
GAGCTGCAAAAAGTGGGGCT+GGG - chr7.2:2942183-2942202 MS.gene050496:CDS 55.0%
GCATGAAACCACCGCACTTG+AGG + chr7.2:2941461-2941480 None:intergenic 55.0%
GGGATGATATAGGCTGCTCC+AGG + chr7.2:2942215-2942234 None:intergenic 55.0%
GTGTGGCTCCGCCACTTAAA+AGG + chr7.2:2940292-2940311 None:intergenic 55.0%
GTTTCCACAAAGCTTCCCCG+CGG + chr7.2:2941967-2941986 None:intergenic 55.0%
TAGGTGACACGCCTCAAGTG+CGG - chr7.2:2941447-2941466 MS.gene050496:intron 55.0%
TCTACCTCCCTTCACCACAC+CGG - chr7.2:2941011-2941030 MS.gene050496:intron 55.0%
TGGAGCCCTCATGTTGTGTG+TGG + chr7.2:2940309-2940328 None:intergenic 55.0%
! GGATTTTGGATGGGGTGAGG+CGG - chr7.2:2942151-2942170 MS.gene050496:CDS 55.0%
!! GAAGGATTAGGGAGGGTGCT+GGG - chr7.2:2939562-2939581 MS.gene050496:CDS 55.0%
!! TGCTGGGCGTAAGTTGATGG+TGG - chr7.2:2939578-2939597 MS.gene050496:CDS 55.0%
CCCTTCACCACACCGGTCAA+GGG - chr7.2:2941018-2941037 MS.gene050496:intron 60.0%
CCCTTGACCGGTGTGGTGAA+GGG + chr7.2:2941021-2941040 None:intergenic 60.0%
CCGCCCCATTCGACTCATAC+AGG - chr7.2:2939740-2939759 MS.gene050496:CDS 60.0%
GCATCGTCAATGCACGCTCG+AGG - chr7.2:2941871-2941890 MS.gene050496:intron 60.0%
GCGGAGCCACACACAACATG+AGG - chr7.2:2940300-2940319 MS.gene050496:intron 60.0%
GGAGCTGCAAAAAGTGGGGC+TGG - chr7.2:2942182-2942201 MS.gene050496:CDS 60.0%
TCACGAGGAGTGGAAGCAGC+TGG + chr7.2:2939381-2939400 None:intergenic 60.0%
TCCCTTCACCACACCGGTCA+AGG - chr7.2:2941017-2941036 MS.gene050496:intron 60.0%
TCCTCGAGCCATTTCTGCCC+AGG + chr7.2:2941544-2941563 None:intergenic 60.0%
TTGACCGGTGTGGTGAAGGG+AGG + chr7.2:2941018-2941037 None:intergenic 60.0%
! GGAAGGATTAGGGAGGGTGC+TGG - chr7.2:2939561-2939580 MS.gene050496:CDS 60.0%
!! GGGTGCTGGGCGTAAGTTGA+TGG - chr7.2:2939575-2939594 MS.gene050496:CDS 60.0%
ACCACCGCGGGGAAGCTTTG+TGG - chr7.2:2941960-2941979 MS.gene050496:CDS 65.0%
CGAGGAGTGGAAGCAGCTGG+TGG + chr7.2:2939378-2939397 None:intergenic 65.0%
GATGAGGCCCTTGACCGGTG+TGG + chr7.2:2941028-2941047 None:intergenic 65.0%
GCCCTTGACCGGTGTGGTGA+AGG + chr7.2:2941022-2941041 None:intergenic 65.0%
GCCTGGGCAGAAATGGCTCG+AGG - chr7.2:2941540-2941559 MS.gene050496:intron 65.0%
GGATGGGGTGAGGCGGTGTA+TGG - chr7.2:2942158-2942177 MS.gene050496:CDS 65.0%
GTGACACGCCTCAAGTGCGG+TGG - chr7.2:2941450-2941469 MS.gene050496:intron 65.0%
TCCACAAAGCTTCCCCGCGG+TGG + chr7.2:2941964-2941983 None:intergenic 65.0%
TGGGGTGAGGCGGTGTATGG+TGG - chr7.2:2942161-2942180 MS.gene050496:CDS 65.0%
! AGTGGGGCTGGGCCTTTTCC+TGG - chr7.2:2942194-2942213 MS.gene050496:CDS 65.0%
! CTGGTGGCACCAGCTCTGGT+TGG + chr7.2:2939362-2939381 None:intergenic 65.0%
GCAGCTGGTGGCACCAGCTC+TGG + chr7.2:2939366-2939385 None:intergenic 70.0%
GCGGAGGAGCCAACCAGAGC+TGG - chr7.2:2939350-2939369 MS.gene050496:CDS 70.0%
CCCGCGGTGGTGACAGCTGC+CGG + chr7.2:2941951-2941970 None:intergenic 75.0%
CCCGGCAGCTGTCACCACCG+CGG - chr7.2:2941947-2941966 MS.gene050496:CDS 75.0%
CCGCGGTGGTGACAGCTGCC+GGG + chr7.2:2941950-2941969 None:intergenic 75.0%
CCGGCAGCTGTCACCACCGC+GGG - chr7.2:2941948-2941967 MS.gene050496:CDS 75.0%
CGGCAGCTGTCACCACCGCG+GGG - chr7.2:2941949-2941968 MS.gene050496:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 2939321 2942346 2939321 ID=MS.gene050496
chr7.2 mRNA 2939321 2942346 2939321 ID=MS.gene050496.t1;Parent=MS.gene050496
chr7.2 exon 2941906 2942346 2941906 ID=MS.gene050496.t1.exon1;Parent=MS.gene050496.t1
chr7.2 CDS 2941906 2942346 2941906 ID=cds.MS.gene050496.t1;Parent=MS.gene050496.t1
chr7.2 exon 2939321 2940217 2939321 ID=MS.gene050496.t1.exon2;Parent=MS.gene050496.t1
chr7.2 CDS 2939321 2940217 2939321 ID=cds.MS.gene050496.t1;Parent=MS.gene050496.t1
Gene Sequence

>MS.gene050496

ATGACTTCAGCACCATTATTGTTCACAGTGCGGAGGAGCCAACCAGAGCTGGTGCCACCAGCTGCTTCCACTCCTCGTGAAGTTAAACTATTATCTGACATAGATGATCAAGAAGGCTTGCGTTTCAATATTCCTATGATGTTTATCTATCGTCATGAACCGTCAATGAAAGAAAAAAACCCTATTAAAGTTCTTAGACATGCACTCTCACAAGCACTTGTGTATTACTATCCATTTGCAGGAAGGATTAGGGAGGGTGCTGGGCGTAAGTTGATGGTGGATTGTACTGGTGAGGGTGTCATGTTCATTGAAGCTGAAGCTGATGTAACACTTGATCAATTTGGGGACGCTTTGCATCCCCCATTCCCATGCTTCAAAGAACTTCTATACGATGTTCCAGGATCAGAACTAATTATTGACCGCCCCATTCGACTCATACAGGTAAAATTATGCTAGTAGATGATCATGAAAGCCTACGTTTCAATTATCGCATTCCAATAAATTTGACATACTCACTTTTTTTTTTATAATATGTTCCAGGATCTGAACTAATTACATACTCACTTGAACTTGAACTTGAACTTGAACTTTCTATGTTAGTTAATTACGTATGCTAAAATAGTTACAACATACAAACATATATCTTGAAATGAAATTTTATATATCTGAATTGTTATGTTTGAGACTTTTAAATATTAACAAATTGTATGTTTATAATTTACCAACAATATAATAAATATAAAAATATTTATTTTTCTCAAAACATTAACAATAATATAGCATTTTTAAAAATAAATTTGTTTAAGAGTACAACTAAAATAATGAAAAATTCAACCAAAAAAATCGTATATTCCAATTTTATGTTGTTACAGATGCATGGAGCGAAAAAACCAAACCTTTAACAAAAGATGACCTCTAAAGAGTTGCTTAAAGATGAGTTGCTTTAAAAAAAAAAAAATGAGTGTACGCCTTTTAAGTGGCGGAGCCACACACAACATGAGGGCTCCACAAATTTTTTGAAATGGAATACTACATTATAAAAAAGTATTAACTAATTAAACCCTATTTAAAAAAATTGGATCCAAATATAATATCTTAAAATGTATAAGTGATTTAAATTTGGGGTAGATTGTTGAGATATTTTTTCTATATAAAAATATAATTTTTTAAAAAAAGTTATGTAAATTAACATGGGAGAGACTACGTGTGTAAAAAGAGAAATAAAATATAATTTTTTAAATTTGAATTAAGATTAAATAATTAAATTTATTGAAAAATATGTTAAAATAAAATTATAAATTAAAAAATGGTTAAATATAATGAAAAGTTATGTGTATTTTGTTGAGATGTTTATGCAATTTTTTTTAGAGGATGTTTAGGATACTTAAATTATTTGAAACAATCGAAACATCAACTGAAATACAAGCAAAATCACATCAATTTTCTAGGTTAATTACATATGCTAAACTGAATTGTTACAATATACAAAACATGAGAAATCAACATGCATGGCAATATCATGTTTTCTAACAAATTTTTGAAAACCTCTAATCTAAAATAAAAAAAGGTTTACTCTTTACTCAAGTTATCAATACAGACGAAACAACATTTCATTGATACATTCTTTGTTTCTGAATTCTTTATGCATTTCGAAATTAAGACAGAAATAAAATGTAATTTTTTTTAGTAGTCTACCTCCCTTCACCACACCGGTCAAGGGCCTCATCGTAAGAATGGTTCAACGAGGGTATTCAGATAAGGATGATTTTCATGTAAAAAAGACGGCACTCACATGCTCATCTTTCCGTTCTTTTTATTGCGCTAATACATGTAAATTATGAACGGTGATTTTCATGAAATTATGATTTTGATTAATAGTGTAGAGATTAGATGTTTGTGAATTGTAAATTGAAACAAATAAACCATGTTTTTCTTTTACGATGACACCAACAATATAGCAAATATAATATAAATTCTTATATTTTTTTAAGACACAAAAAAAATTATTATAAGAAAATTTGTTCTGTTTATAACTGGATCAGCCCAAAATCCCTTATGTTTTTTATATATAGTATAAATAAATTTACTTATATAACATATATCTTGATATTGGATTCAAAATATGATAGGTGACACGCCTCAAGTGCGGTGGTTTCATGCTAGTCGTGTATTTGAACCATACAATGAGCGATGGAGCTGGTTTGAAACTATTCATGAATGCCTGGGCAGAAATGGCTCGAGGAGCACATAAACCTTCCATTCAACCTGTATGGAATAGGGAGATTCTAATGGCAAGAGACCCACCACACATTACATGCAACCATCATGAATACGAACATATTTTTTCGTCAAATACCGTCAAGGAAGAAGATACTACGACCCTGGTTCATCAATCTTTCTTCTTTAGAACTTCTGACATAGCTGCGCTTCGTCTCTTGGTTCCATCTCACCTTCGTCATTGTACGACATTCGATCTTATCACTTCATGTTTTTGGTGCTGCCGCACAAAAGCATTGCAGTTAGAGGCAGATGAAGAGATACGAATGATGTGCATCGTCAATGCACGCTCGAGGTTTAGCGTCAACCATTCGCCACTTGTTGGATATTACGGTAATTGTTTTGCTTACCCGGCAGCTGTCACCACCGCGGGGAAGCTTTGTGGAAACTCATTAGGTTATGCTGTGGAGTTGGTGAGAAAATTAAAAGCTGAAGTTACAGAGGAATACATGCATTCTGTAGCAGATCTTATGGTTATTAAGGAACGGTGTTTATTTACAACTACAAGGTCTTGTGTTGTTTCAGATGTGACTCGTATAAAGTTCAAAGAAGTGGATTTTGGATGGGGTGAGGCGGTGTATGGTGGAGCTGCAAAAAGTGGGGCTGGGCCTTTTCCTGGAGCAGCCTATATCATCCCACATAAGAATGTAAAAGGAGAAGAAGGTTTCATATTACTAGTTTGTTTGTCCTTTGAAGATATGAAGAGGTTTGCTAAAGAGTTAGATGAGATGCTTGGTAAACAAAATTAA

Protein sequence

>MS.gene050496.t1

MTSAPLLFTVRRSQPELVPPAASTPREVKLLSDIDDQEGLRFNIPMMFIYRHEPSMKEKNPIKVLRHALSQALVYYYPFAGRIREGAGRKLMVDCTGEGVMFIEAEADVTLDQFGDALHPPFPCFKELLYDVPGSELIIDRPIRLIQVTRLKCGGFMLVVYLNHTMSDGAGLKLFMNAWAEMARGAHKPSIQPVWNREILMARDPPHITCNHHEYEHIFSSNTVKEEDTTTLVHQSFFFRTSDIAALRLLVPSHLRHCTTFDLITSCFWCCRTKALQLEADEEIRMMCIVNARSRFSVNHSPLVGYYGNCFAYPAAVTTAGKLCGNSLGYAVELVRKLKAEVTEEYMHSVADLMVIKERCLFTTTRSCVVSDVTRIKFKEVDFGWGEAVYGGAAKSGAGPFPGAAYIIPHKNVKGEEGFILLVCLSFEDMKRFAKELDEMLGKQN