AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059837


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059837.t1 MTR_2g079420 93.064 173 11 1 1 172 1 173 1.34e-115 325
MS.gene059837.t1 MTR_8g059015 65.385 182 47 6 1 172 1 176 2.86e-75 223
MS.gene059837.t1 MTR_3g089065 65.600 125 42 1 48 172 50 173 6.50e-61 186
MS.gene059837.t1 MTR_4g085880 53.125 96 45 0 77 172 73 168 3.38e-37 126
MS.gene059837.t1 MTR_2g079340 50.495 101 50 0 72 172 39 139 8.19e-34 117
MS.gene059837.t1 MTR_2g079400 48.039 102 53 0 69 170 34 135 6.86e-33 114
MS.gene059837.t1 MTR_2g079360 52.941 102 47 1 69 169 46 147 7.72e-32 112
MS.gene059837.t1 MTR_2g079380 53.571 84 39 0 69 152 18 101 1.79e-25 98.6
MS.gene059837.t1 MTR_1g114290 38.532 109 59 2 69 172 70 175 5.14e-23 90.5
MS.gene059837.t1 MTR_1g098660 33.981 103 68 0 67 169 60 162 4.27e-20 82.4
MS.gene059837.t1 MTR_5g021180 43.333 90 49 2 83 172 28 115 1.18e-16 72.4
MS.gene059837.t1 MTR_4g094690 42.500 80 43 2 81 158 77 155 7.49e-16 71.2
MS.gene059837.t1 MTR_7g009070 36.145 83 51 2 88 170 51 131 1.01e-15 70.1
MS.gene059837.t1 MTR_1g023140 42.254 71 40 1 88 158 31 100 1.60e-14 66.6
MS.gene059837.t1 MTR_8g107460 41.975 81 45 2 88 168 279 357 7.64e-14 68.6
MS.gene059837.t1 MTR_3g112410 40.845 71 41 1 88 158 31 100 8.32e-14 64.7
MS.gene059837.t1 MTR_5g084930 36.170 94 60 0 57 150 18 111 3.64e-13 66.6
MS.gene059837.t1 MTR_5g084930 32.990 97 63 1 60 156 151 245 1.01e-12 65.5
MS.gene059837.t1 MTR_2g021750 32.692 104 70 0 47 150 8 111 8.29e-11 59.7
MS.gene059837.t1 MTR_1g037680 30.000 90 61 1 83 170 95 184 9.03e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059837.t1 AT3G15360 60.510 157 58 2 20 172 35 191 1.50e-64 196
MS.gene059837.t1 AT1G03680 53.548 155 68 3 18 172 29 179 9.60e-56 174
MS.gene059837.t1 AT4G03520 52.229 157 67 4 20 172 33 185 3.37e-55 172
MS.gene059837.t1 AT2G15570 50.450 111 52 1 62 172 64 171 2.08e-37 127
MS.gene059837.t1 AT2G15570 49.550 111 54 1 62 172 64 172 3.16e-37 126
MS.gene059837.t1 AT4G03520 63.380 71 26 0 102 172 1 71 1.54e-29 103
MS.gene059837.t1 AT1G76760 36.792 106 67 0 67 172 63 168 3.86e-23 90.5
MS.gene059837.t1 AT1G43560 32.927 164 94 3 14 172 11 163 2.23e-22 88.6
MS.gene059837.t1 AT1G50320 33.577 137 76 2 38 172 53 176 3.50e-21 85.9
MS.gene059837.t1 AT1G19730 42.105 76 44 0 83 158 26 101 4.17e-18 75.9
MS.gene059837.t1 AT4G12170 40.860 93 55 0 69 161 51 143 2.50e-17 75.1
MS.gene059837.t1 AT3G51030 44.444 90 48 2 83 172 26 113 4.89e-17 73.2
MS.gene059837.t1 AT5G42980 39.773 88 51 2 83 170 25 110 9.95e-17 72.4
MS.gene059837.t1 AT2G35010 38.824 85 49 2 76 158 97 180 9.05e-15 68.9
MS.gene059837.t1 AT2G35010 38.824 85 49 2 76 158 97 180 9.05e-15 68.9
MS.gene059837.t1 AT5G39950 36.471 85 50 2 77 158 36 119 1.78e-14 67.0
MS.gene059837.t1 AT1G52990 40.741 81 47 1 82 161 223 303 5.54e-14 68.6
MS.gene059837.t1 AT1G45145 36.842 76 47 1 83 158 25 99 1.31e-13 64.3
MS.gene059837.t1 AT1G31020 35.065 77 47 2 83 157 69 144 3.24e-12 61.6
MS.gene059837.t1 AT2G32920 28.467 137 87 4 13 146 113 241 4.74e-12 63.5
MS.gene059837.t1 AT2G32920 36.585 82 52 0 69 150 32 113 5.94e-11 60.5
MS.gene059837.t1 AT1G04980 26.984 126 89 1 21 146 124 246 5.83e-12 63.2
MS.gene059837.t1 AT1G04980 36.585 82 52 0 69 150 34 115 3.81e-11 60.8
MS.gene059837.t1 AT3G54960 33.010 103 68 1 68 170 100 201 7.66e-12 63.2
MS.gene059837.t1 AT3G06730 27.545 167 106 6 1 155 1 164 7.67e-12 61.2
MS.gene059837.t1 AT3G54960 33.010 103 68 1 68 170 100 201 8.57e-12 62.8
MS.gene059837.t1 AT1G69880 33.803 71 46 1 88 158 62 131 4.87e-11 58.2
MS.gene059837.t1 AT1G59730 33.673 98 60 3 76 170 31 126 5.93e-11 57.4
MS.gene059837.t1 AT4G04950 28.750 80 56 1 83 162 19 97 9.07e-11 59.7

Find 54 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTGTGTTGGTCGAATTC+TGG 0.102485 2.4:-18289301 MS.gene059837:CDS
CGACGATTGGAGAGCGAATA+AGG 0.177500 2.4:+18293048 None:intergenic
CTTTGCTAGCTCATCAACTA+TGG 0.233293 2.4:+18289244 None:intergenic
CTTCTATTACTGATGGAAAT+TGG 0.291432 2.4:-18289349 MS.gene059837:CDS
TCCTGTGTTGGTCGAATTCT+GGG 0.312332 2.4:-18289300 MS.gene059837:CDS
ATTTGTGGTCAATGTTGCTT+TGG 0.336888 2.4:+18289079 None:intergenic
GAAAAGAAAGATACAGTTAT+TGG 0.371482 2.4:-18289110 MS.gene059837:CDS
GACGATTGGAGAGCGAATAA+GGG 0.423584 2.4:+18293049 None:intergenic
CCTTCAGTTGCTACTCGGTA+TGG 0.423871 2.4:-18289173 MS.gene059837:CDS
TTTGTGGTCAATGTTGCTTT+GGG 0.452585 2.4:+18289080 None:intergenic
CGCAGACGAGTGGCGGAGAC+TGG 0.459267 2.4:+18292972 None:intergenic
GAGGAAACGCGGCAGTGCTC+CGG 0.477586 2.4:+18293018 None:intergenic
CTCCAATCGTCGCTTCTCGC+CGG 0.477652 2.4:-18293037 MS.gene059837:CDS
CGTGATAACACAGCCGTTGA+AGG 0.489745 2.4:-18292894 MS.gene059837:intron
CTCCGGCGAGAAGCGACGAT+TGG 0.491040 2.4:+18293035 None:intergenic
CTTCAGTTGCTACTCGGTAT+GGG 0.494438 2.4:-18289172 MS.gene059837:CDS
AGCTTGAGGCCGGTGTATTG+AGG 0.508457 2.4:+18292999 None:intergenic
GACTGGTCGGAGCTTGAGGC+CGG 0.510218 2.4:+18292989 None:intergenic
GCAGTGGCTTCTATTACTGA+TGG 0.533416 2.4:-18289356 MS.gene059837:intron
TTCTTGAAGAAAATGACAGT+TGG 0.533751 2.4:+18289137 None:intergenic
AACCGAACCCTAACCTTCAA+CGG 0.535342 2.4:+18292881 None:intergenic
TTTGCTAGCTCATCAACTAT+GGG 0.536511 2.4:+18289245 None:intergenic
CGGAGACTGGTCGGAGCTTG+AGG 0.546843 2.4:+18292985 None:intergenic
TATGGGATGAATCATGCGGC+AGG 0.560107 2.4:+18289262 None:intergenic
TGGTCGAATTCTGGGCTCCA+TGG 0.560925 2.4:-18289292 MS.gene059837:CDS
AGAATCTGAGATTCCTGTGT+TGG 0.562341 2.4:-18289312 MS.gene059837:CDS
TCGAATGTTGTTCGTCGCGG+TGG 0.566799 2.4:-18292936 MS.gene059837:CDS
ACCGCGACGAACAACATTCG+AGG 0.568696 2.4:+18292938 None:intergenic
CGGTGGAACCGTCGTGTGTG+AGG 0.573215 2.4:-18292919 MS.gene059837:CDS
GGAGAAGGATTCGAGTTGTA+CGG 0.579686 2.4:+18293070 None:intergenic
GAATTCTGGGCTCCATGGTG+TGG 0.587228 2.4:-18289287 MS.gene059837:CDS
AATCTCAGATTCTATGACAA+GGG 0.589830 2.4:+18289322 None:intergenic
GACGAGTGGCGGAGACTGGT+CGG 0.590163 2.4:+18292976 None:intergenic
GCCCAGAATTCGACCAACAC+AGG 0.591293 2.4:+18289299 None:intergenic
ATGCGGCAGGGACCACACCA+TGG 0.592003 2.4:+18289275 None:intergenic
CGACGAACAACATTCGAGGC+GGG 0.593567 2.4:+18292942 None:intergenic
CAGTCTCCGCCACTCGTCTG+CGG 0.594319 2.4:-18292971 MS.gene059837:CDS
TGGAGAGCGAATAAGGGAGA+AGG 0.600317 2.4:+18293055 None:intergenic
TTGACTCCGCAGACGAGTGG+CGG 0.600852 2.4:+18292965 None:intergenic
GAGCTAGCAAAGGAATATGC+GGG 0.603263 2.4:-18289233 MS.gene059837:CDS
AAAGTCCTTCAGTTGCTACT+CGG 0.607500 2.4:-18289178 MS.gene059837:CDS
GGGTTGACTCCGCAGACGAG+TGG 0.610441 2.4:+18292962 None:intergenic
CATAGTTGATGAGCTAGCAA+AGG 0.630561 2.4:-18289243 MS.gene059837:CDS
GCCTCGAATGTTGTTCGTCG+CGG 0.633957 2.4:-18292939 MS.gene059837:CDS
CCATACCGAGTAGCAACTGA+AGG 0.641503 2.4:+18289173 None:intergenic
ATGGGATGAATCATGCGGCA+GGG 0.655515 2.4:+18289263 None:intergenic
TGAGCTAGCAAAGGAATATG+CGG 0.658244 2.4:-18289234 MS.gene059837:CDS
CAACTATGGGATGAATCATG+CGG 0.659788 2.4:+18289258 None:intergenic
GAATCTCAGATTCTATGACA+AGG 0.685810 2.4:+18289321 None:intergenic
ATCACGAGCCTCACACACGA+CGG 0.693040 2.4:+18292911 None:intergenic
GCCGGTGTATTGAGGAAACG+CGG 0.696706 2.4:+18293007 None:intergenic
GCCGCGTTTCCTCAATACAC+CGG 0.698489 2.4:-18293008 MS.gene059837:CDS
GCGACGAACAACATTCGAGG+CGG 0.707036 2.4:+18292941 None:intergenic
GAAGGATTCGAGTTGTACGG+TGG 0.711676 2.4:+18293073 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTGAAAAACATAAA+TGG + chr2.4:18292601-18292620 None:intergenic 10.0%
!! TATATATGAATTTCTAAATT+TGG + chr2.4:18291243-18291262 None:intergenic 10.0%
!! AAAAGAATAATACACTAAAA+GGG + chr2.4:18289534-18289553 None:intergenic 15.0%
!! TAAAAGAATAATACACTAAA+AGG + chr2.4:18289535-18289554 None:intergenic 15.0%
!!! ATAAATATTTATTTGGAACA+TGG + chr2.4:18290255-18290274 None:intergenic 15.0%
!!! ATTTTTTTTGCCTTTAATTT+CGG - chr2.4:18291739-18291758 MS.gene059837:intron 15.0%
!!! TAGTTAAACTTATGTTTTAT+TGG - chr2.4:18292754-18292773 MS.gene059837:intron 15.0%
!! AACCTAACATTATGAATATT+AGG + chr2.4:18290340-18290359 None:intergenic 20.0%
!! ACAAATACAAAGTAAGATAT+TGG + chr2.4:18292270-18292289 None:intergenic 20.0%
!! CTAAAAATATATGTTCAAGT+TGG + chr2.4:18292421-18292440 None:intergenic 20.0%
!! TAAAAATAAAATCAGAGTTC+TGG + chr2.4:18292361-18292380 None:intergenic 20.0%
!! TATGAATTTCTAAATTTGGT+AGG + chr2.4:18291239-18291258 None:intergenic 20.0%
!!! GAAGATTTTTAGTAATCAAT+TGG - chr2.4:18291666-18291685 MS.gene059837:intron 20.0%
!!! TTATTGAAATTAAGCCATTT+TGG - chr2.4:18290271-18290290 MS.gene059837:intron 20.0%
!!! TTTGAAACTATTAACTAGTT+AGG + chr2.4:18290228-18290247 None:intergenic 20.0%
! AAAGCCACTATCAATAATTA+GGG + chr2.4:18291641-18291660 None:intergenic 25.0%
! AGAACTTCCTTTAATAAAGA+TGG - chr2.4:18290872-18290891 MS.gene059837:intron 25.0%
! AGCTACTACCTTATTAATTT+AGG - chr2.4:18291034-18291053 MS.gene059837:intron 25.0%
! ATAAATAATTAACGTGAGAG+AGG - chr2.4:18291545-18291564 MS.gene059837:intron 25.0%
! ATAACATTGACATTAACTGA+CGG - chr2.4:18289598-18289617 MS.gene059837:intron 25.0%
! ATTTCCCTAATTATTGATAG+TGG - chr2.4:18291634-18291653 MS.gene059837:intron 25.0%
! CACTATATATATATATCACG+TGG - chr2.4:18290053-18290072 MS.gene059837:intron 25.0%
! CATATATGTCAGTTATTCAA+GGG + chr2.4:18290721-18290740 None:intergenic 25.0%
! GAAAAGAAAGATACAGTTAT+TGG - chr2.4:18293028-18293047 MS.gene059837:CDS 25.0%
! GTACTAATACTAGTATTTGT+TGG - chr2.4:18292190-18292209 MS.gene059837:intron 25.0%
! TAAAGCCACTATCAATAATT+AGG + chr2.4:18291642-18291661 None:intergenic 25.0%
! TAAATAATTAACGTGAGAGA+GGG - chr2.4:18291546-18291565 MS.gene059837:intron 25.0%
! TAACACCATAATTACTTCTA+GGG + chr2.4:18292065-18292084 None:intergenic 25.0%
! TAACTAGTTAGGAATGTATT+TGG + chr2.4:18290217-18290236 None:intergenic 25.0%
! TATAACTCATCTAATCAACT+AGG + chr2.4:18290780-18290799 None:intergenic 25.0%
! TCATATATGTCAGTTATTCA+AGG + chr2.4:18290722-18290741 None:intergenic 25.0%
! TTTCAATAAGCATGCTAAAA+TGG - chr2.4:18292298-18292317 MS.gene059837:intron 25.0%
!! AGTATTAGTGTTGGAATTAA+AGG - chr2.4:18290937-18290956 MS.gene059837:intron 25.0%
!! ATGTTTTGCTAACCAAATTT+CGG + chr2.4:18291811-18291830 None:intergenic 25.0%
!! ATTCTTCTTATTCTCTGAAA+CGG + chr2.4:18291712-18291731 None:intergenic 25.0%
!! CAGGAATTTTTCTATATTTG+TGG + chr2.4:18293077-18293096 None:intergenic 25.0%
!! TTTTTGATGCATTTATCATC+TGG - chr2.4:18292616-18292635 MS.gene059837:intron 25.0%
!!! AAAAACGTTTTGAATCAATC+CGG - chr2.4:18291763-18291782 MS.gene059837:intron 25.0%
!!! AACGTTTTTTCCGAAATTAA+AGG + chr2.4:18291752-18291771 None:intergenic 25.0%
!!! ATTATTGATAGTGGCTTTAT+TGG - chr2.4:18291643-18291662 MS.gene059837:intron 25.0%
!!! GTGTTTTTTTTTTTCTGTTC+TGG + chr2.4:18291406-18291425 None:intergenic 25.0%
!!! TATTAGATTTTGAAGCATTC+AGG - chr2.4:18292150-18292169 MS.gene059837:intron 25.0%
!!! TTATTGATAGTGGCTTTATT+GGG - chr2.4:18291644-18291663 MS.gene059837:intron 25.0%
AAAAACTGCATAACATGCTT+AGG + chr2.4:18290479-18290498 None:intergenic 30.0%
AAAATAACAGACCCATTAAG+TGG + chr2.4:18290516-18290535 None:intergenic 30.0%
AAGCTTCAAAATCATCTCAA+TGG - chr2.4:18291431-18291450 MS.gene059837:intron 30.0%
AATCTCAGATTCTATGACAA+GGG + chr2.4:18292819-18292838 None:intergenic 30.0%
AGGTAAAGTTCCATGATTTA+TGG - chr2.4:18291599-18291618 MS.gene059837:intron 30.0%
AGTCTACATTGCACTAAAAA+GGG - chr2.4:18289907-18289926 MS.gene059837:intron 30.0%
ATTGAACATCATCACACATA+AGG - chr2.4:18290393-18290412 MS.gene059837:intron 30.0%
ATTGTAATCTGCAGAACTAA+TGG - chr2.4:18291510-18291529 MS.gene059837:intron 30.0%
ATTTCATGTGTTTCGGATTA+TGG + chr2.4:18289655-18289674 None:intergenic 30.0%
CAAACAATTCATGTTGAAGA+AGG - chr2.4:18291461-18291480 MS.gene059837:intron 30.0%
CAAAGTAAGATATTGGTCAA+AGG + chr2.4:18292263-18292282 None:intergenic 30.0%
CATTTCCCTAGAAGTAATTA+TGG - chr2.4:18292057-18292076 MS.gene059837:intron 30.0%
CTAACACCATAATTACTTCT+AGG + chr2.4:18292066-18292085 None:intergenic 30.0%
CTGAAATTTAGTGTACGTAT+TGG - chr2.4:18289459-18289478 MS.gene059837:intron 30.0%
CTGTTTATGAGTATTAGTGT+TGG - chr2.4:18290928-18290947 MS.gene059837:intron 30.0%
CTTCAATTGTAGACATTGAA+AGG - chr2.4:18289816-18289835 MS.gene059837:intron 30.0%
CTTCTATTACTGATGGAAAT+TGG - chr2.4:18292789-18292808 MS.gene059837:intron 30.0%
CTTCTTCAACATGAATTGTT+TGG + chr2.4:18291463-18291482 None:intergenic 30.0%
GGCCTAATATTCATAATGTT+AGG - chr2.4:18290335-18290354 MS.gene059837:intron 30.0%
GGTAAAGTTCCATGATTTAT+GGG - chr2.4:18291600-18291619 MS.gene059837:intron 30.0%
GTCATAGTCACATTAAAAGA+AGG - chr2.4:18291483-18291502 MS.gene059837:intron 30.0%
GTTGCTTACTCTAATAGTTA+TGG - chr2.4:18290540-18290559 MS.gene059837:intron 30.0%
TAACATTGACATTAACTGAC+GGG - chr2.4:18289599-18289618 MS.gene059837:intron 30.0%
TAGGTGACTTACAAAACTAA+CGG + chr2.4:18289403-18289422 None:intergenic 30.0%
TAGTCACATTAAAAGAAGGA+AGG - chr2.4:18291487-18291506 MS.gene059837:intron 30.0%
TGCGTATATTTCATGTGTTT+CGG + chr2.4:18289662-18289681 None:intergenic 30.0%
TGGGTAAAAAATTAGCATGT+GGG + chr2.4:18290124-18290143 None:intergenic 30.0%
TTAGATCTGTTGAAAGTGAT+TGG - chr2.4:18289317-18289336 MS.gene059837:CDS 30.0%
TTCTTGAAGAAAATGACAGT+TGG + chr2.4:18293004-18293023 None:intergenic 30.0%
TTGGTTAGCAAAACATAAAC+CGG - chr2.4:18291815-18291834 MS.gene059837:intron 30.0%
TTGTAATCTGCAGAACTAAT+GGG - chr2.4:18291511-18291530 MS.gene059837:intron 30.0%
TTGTGTTGAGTCTAATTACA+TGG - chr2.4:18290820-18290839 MS.gene059837:intron 30.0%
TTTCATGTGTTTCGGATTAT+GGG + chr2.4:18289654-18289673 None:intergenic 30.0%
! TAAGCATGTTATGCAGTTTT+TGG - chr2.4:18290478-18290497 MS.gene059837:intron 30.0%
! TGCTAAAATGGTATAGCTTT+TGG - chr2.4:18292310-18292329 MS.gene059837:intron 30.0%
! TGTTTTGCTAACCAAATTTC+GGG + chr2.4:18291810-18291829 None:intergenic 30.0%
! TTCACTAAATGCCACTTAAT+GGG - chr2.4:18290502-18290521 MS.gene059837:intron 30.0%
! TTTCACTAAATGCCACTTAA+TGG - chr2.4:18290501-18290520 MS.gene059837:intron 30.0%
!! AAAACGTTTTGAATCAATCC+GGG - chr2.4:18291764-18291783 MS.gene059837:intron 30.0%
!! ACTAGTATTTGTTGGTAACT+TGG - chr2.4:18292198-18292217 MS.gene059837:intron 30.0%
!! TGTTTTATTGGATATTGCAG+TGG - chr2.4:18292766-18292785 MS.gene059837:intron 30.0%
!!! ACTGTCATTTTCTTCAAGAA+CGG - chr2.4:18293004-18293023 MS.gene059837:CDS 30.0%
!!! CTTTTAAAACTCTAGCAACT+GGG + chr2.4:18289439-18289458 None:intergenic 30.0%
!!! TTTTAAAACTCTAGCAACTG+GGG + chr2.4:18289438-18289457 None:intergenic 30.0%
AAAGCCCCAAACCAAATATT+GGG + chr2.4:18290368-18290387 None:intergenic 35.0%
AACAGCCTCTTATGTAAAAC+AGG + chr2.4:18290013-18290032 None:intergenic 35.0%
AAGGTGAAGTTGTTAACCAT+GGG - chr2.4:18290412-18290431 MS.gene059837:intron 35.0%
ACAGCCTCTTATGTAAAACA+GGG + chr2.4:18290012-18290031 None:intergenic 35.0%
ACTCTAATAGTTATGGACAG+AGG - chr2.4:18290547-18290566 MS.gene059837:intron 35.0%
ACTGGGGGAAAAAAAAATCT+AGG + chr2.4:18289422-18289441 None:intergenic 35.0%
AGGATAAATTGAATGTCGAG+CGG - chr2.4:18290957-18290976 MS.gene059837:intron 35.0%
ATTCTTACTCACAGTCACAT+AGG + chr2.4:18289353-18289372 None:intergenic 35.0%
CACGAAGGCCTAAATTAATA+AGG + chr2.4:18291045-18291064 None:intergenic 35.0%
CCATGGGCAAATAGAAAAAA+TGG - chr2.4:18290428-18290447 MS.gene059837:intron 35.0%
CCTTCGTGTTATAGAAGTAA+GGG - chr2.4:18291057-18291076 MS.gene059837:intron 35.0%
CTCTGATTCTCTCAATCAAT+GGG + chr2.4:18290905-18290924 None:intergenic 35.0%
CTCTTATGTAAAACAGGGTA+AGG + chr2.4:18290007-18290026 None:intergenic 35.0%
GAATCTCAGATTCTATGACA+AGG + chr2.4:18292820-18292839 None:intergenic 35.0%
GAGGTCACAGATTCAAATAT+TGG - chr2.4:18292491-18292510 MS.gene059837:intron 35.0%
GAGTCTACATTGCACTAAAA+AGG - chr2.4:18289906-18289925 MS.gene059837:intron 35.0%
GATTAGATGAGTTATACGAC+AGG - chr2.4:18290784-18290803 MS.gene059837:intron 35.0%
GTGGGTAAAAAATTAGCATG+TGG + chr2.4:18290125-18290144 None:intergenic 35.0%
TAAAGCCCCAAACCAAATAT+TGG + chr2.4:18290369-18290388 None:intergenic 35.0%
TAAGGTGAAGTTGTTAACCA+TGG - chr2.4:18290411-18290430 MS.gene059837:intron 35.0%
TACGAATATGTGAATTGCAC+AGG - chr2.4:18291579-18291598 MS.gene059837:intron 35.0%
TATTTGAATCTGTGACCTCA+AGG + chr2.4:18292490-18292509 None:intergenic 35.0%
TCATGCTAAGATACTACAGA+AGG + chr2.4:18290651-18290670 None:intergenic 35.0%
TCCAATACACCCATAAATCA+TGG + chr2.4:18291612-18291631 None:intergenic 35.0%
TCCATGATTTATGGGTGTAT+TGG - chr2.4:18291608-18291627 MS.gene059837:intron 35.0%
TCTCTGATTCTCTCAATCAA+TGG + chr2.4:18290906-18290925 None:intergenic 35.0%
TGCTCTTGCTAATGAATTTG+AGG + chr2.4:18291332-18291351 None:intergenic 35.0%
TGGTTAGCAAAACATAAACC+GGG - chr2.4:18291816-18291835 MS.gene059837:intron 35.0%
TTGAAAGGCCTCTCAATTAT+AGG - chr2.4:18289831-18289850 MS.gene059837:intron 35.0%
TTTGCTAGCTCATCAACTAT+GGG + chr2.4:18292896-18292915 None:intergenic 35.0%
! AACTAGAATCGCTCGAATTT+TGG + chr2.4:18290583-18290602 None:intergenic 35.0%
! ATCGCGAGTTTGTCTATTTT+GGG - chr2.4:18292024-18292043 MS.gene059837:intron 35.0%
! CTTACCCTGTTTTACATAAG+AGG - chr2.4:18290005-18290024 MS.gene059837:intron 35.0%
! TCTTTAAGAGCCATACAAAC+TGG - chr2.4:18290175-18290194 MS.gene059837:intron 35.0%
! TTTAAAACTCTAGCAACTGG+GGG + chr2.4:18289437-18289456 None:intergenic 35.0%
!! AGATTTGTTACCCAGAAATC+CGG + chr2.4:18291862-18291881 None:intergenic 35.0%
!! AGTTCTGGTTCTTGTTTCTT+CGG + chr2.4:18292346-18292365 None:intergenic 35.0%
!!! ATGCTAATTTTTTACCCACG+TGG - chr2.4:18290126-18290145 MS.gene059837:intron 35.0%
!!! CCATTTTTTCTATTTGCCCA+TGG + chr2.4:18290431-18290450 None:intergenic 35.0%
!!! CTAACCAAATTTCGGGTTTT+CGG + chr2.4:18291803-18291822 None:intergenic 35.0%
!!! GCTTTTAAAACTCTAGCAAC+TGG + chr2.4:18289440-18289459 None:intergenic 35.0%
!!! TAACCAAATTTCGGGTTTTC+GGG + chr2.4:18291802-18291821 None:intergenic 35.0%
AAAGTCCTTCAGTTGCTACT+CGG - chr2.4:18292960-18292979 MS.gene059837:CDS 40.0%
AATAAAGCTCCCGCATAAGT+AGG + chr2.4:18289500-18289519 None:intergenic 40.0%
AATTCCCAGCTAAGGTGAAA+TGG - chr2.4:18289622-18289641 MS.gene059837:intron 40.0%
ACAAACTCGAGATCCTAAGT+AGG - chr2.4:18291157-18291176 MS.gene059837:intron 40.0%
ACACCAATGAGATCGTGAAT+CGG - chr2.4:18291188-18291207 MS.gene059837:intron 40.0%
ACATTGTTGAAGTCATGCAG+TGG + chr2.4:18290152-18290171 None:intergenic 40.0%
AGGAATAAGGAACCCAATCT+TGG + chr2.4:18289870-18289889 None:intergenic 40.0%
AGGTCACAATGGTTGAATCA+AGG + chr2.4:18292470-18292489 None:intergenic 40.0%
ATAAAGCTCCCGCATAAGTA+GGG + chr2.4:18289499-18289518 None:intergenic 40.0%
ATTCAACCATTGTGACCTTG+AGG - chr2.4:18292472-18292491 MS.gene059837:intron 40.0%
CAACTATGGGATGAATCATG+CGG + chr2.4:18292883-18292902 None:intergenic 40.0%
CCAATTCACATGCTCTTGAA+TGG - chr2.4:18290684-18290703 MS.gene059837:intron 40.0%
CCCTTACTTCTATAACACGA+AGG + chr2.4:18291060-18291079 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + chr2.4:18289981-18290000 None:intergenic 40.0%
CGTGGGACCATCTTTATTAA+AGG + chr2.4:18290882-18290901 None:intergenic 40.0%
CTTCTAAACTTGTACCCCAA+GGG - chr2.4:18291120-18291139 MS.gene059837:intron 40.0%
CTTTGCTAGCTCATCAACTA+TGG + chr2.4:18292897-18292916 None:intergenic 40.0%
GCCTTCGTGTTATAGAAGTA+AGG - chr2.4:18291056-18291075 MS.gene059837:intron 40.0%
GTCGTTGAAAAACGCAGAAT+CGG + chr2.4:18291910-18291929 None:intergenic 40.0%
GTGACTTACAAAACTAACGG+AGG + chr2.4:18289400-18289419 None:intergenic 40.0%
GTTGCGTACAATACACCAAA+TGG + chr2.4:18289985-18290004 None:intergenic 40.0%
TCTTAAGCATACAAGCAGAG+AGG + chr2.4:18292523-18292542 None:intergenic 40.0%
TGAGCTAGCAAAGGAATATG+CGG - chr2.4:18292904-18292923 MS.gene059837:CDS 40.0%
TGAGCTCCCAATATTTGGTT+TGG - chr2.4:18290359-18290378 MS.gene059837:intron 40.0%
TGGGTTCCTTATTCCTATCA+TGG - chr2.4:18289874-18289893 MS.gene059837:intron 40.0%
TTACTCAGACTGCAACTGAT+GGG - chr2.4:18292556-18292575 MS.gene059837:intron 40.0%
! AGAATCTGAGATTCCTGTGT+TGG - chr2.4:18292826-18292845 MS.gene059837:intron 40.0%
! AGGGGAGATTTAGTTTCAAG+GGG + chr2.4:18289736-18289755 None:intergenic 40.0%
! AGTGGTGGGATTTGATATGT+AGG + chr2.4:18289708-18289727 None:intergenic 40.0%
! CCATTCAAGAGCATGTGAAT+TGG + chr2.4:18290687-18290706 None:intergenic 40.0%
! CGGAGGAACTAATTTGTCAT+TGG + chr2.4:18289383-18289402 None:intergenic 40.0%
! GAGCTCCCAATATTTGGTTT+GGG - chr2.4:18290360-18290379 MS.gene059837:intron 40.0%
! GAGGGGAGATTTAGTTTCAA+GGG + chr2.4:18289737-18289756 None:intergenic 40.0%
! GATCGCGAGTTTGTCTATTT+TGG - chr2.4:18292023-18292042 MS.gene059837:intron 40.0%
! GTTTGCATGTTTTGCAGTTC+AGG - chr2.4:18292638-18292657 MS.gene059837:intron 40.0%
! TAGGTTGAGCTCCCAATATT+TGG - chr2.4:18290354-18290373 MS.gene059837:intron 40.0%
! TGAGGGGAGATTTAGTTTCA+AGG + chr2.4:18289738-18289757 None:intergenic 40.0%
! TTACATAAGAGGCTGTTTCC+AGG - chr2.4:18290016-18290035 MS.gene059837:intron 40.0%
!! AGCTCCCAATATTTGGTTTG+GGG - chr2.4:18290361-18290380 MS.gene059837:intron 40.0%
!! CATAGTTGATGAGCTAGCAA+AGG - chr2.4:18292895-18292914 MS.gene059837:CDS 40.0%
!! GAATCGGAAATTTGTTGTCG+CGG + chr2.4:18291941-18291960 None:intergenic 40.0%
!! GATTTGTTACCCAGAAATCC+GGG + chr2.4:18291861-18291880 None:intergenic 40.0%
AACACAGCCGTTGAAGGTTA+GGG - chr2.4:18289250-18289269 MS.gene059837:CDS 45.0%
AACCGAACCCTAACCTTCAA+CGG + chr2.4:18289260-18289279 None:intergenic 45.0%
AATACACTAAAAGGGCAGCC+CGG + chr2.4:18289526-18289545 None:intergenic 45.0%
ACCAATGAGATCGTGAATCG+GGG - chr2.4:18291190-18291209 MS.gene059837:intron 45.0%
ACTCTAGTCTCATCCTAGGA+GGG + chr2.4:18289775-18289794 None:intergenic 45.0%
AGCATTCAGGATTGATGTGC+TGG - chr2.4:18292163-18292182 MS.gene059837:intron 45.0%
AGGATGAGACTAGAGTAGCA+GGG - chr2.4:18289779-18289798 MS.gene059837:intron 45.0%
AGTGCAATGTAGACTCCATG+AGG + chr2.4:18289902-18289921 None:intergenic 45.0%
AGTGTCACCAAGACACTTCT+GGG - chr2.4:18290296-18290315 MS.gene059837:intron 45.0%
ATCCTAGGAGGGCAATAGAA+AGG + chr2.4:18289764-18289783 None:intergenic 45.0%
ATTCAGGATTGATGTGCTGG+TGG - chr2.4:18292166-18292185 MS.gene059837:intron 45.0%
ATTCCTATCATGGAGCCTCA+TGG - chr2.4:18289884-18289903 MS.gene059837:intron 45.0%
ATTCTCTCAATCAATGGGCG+TGG + chr2.4:18290900-18290919 None:intergenic 45.0%
CACCAATGAGATCGTGAATC+GGG - chr2.4:18291189-18291208 MS.gene059837:intron 45.0%
CCTCGACACCTATAATTGAG+AGG + chr2.4:18289842-18289861 None:intergenic 45.0%
CTCGAGATCCTAAGTAGGAT+CGG - chr2.4:18291162-18291181 MS.gene059837:intron 45.0%
CTTACTCAGACTGCAACTGA+TGG - chr2.4:18292555-18292574 MS.gene059837:intron 45.0%
CTTCAGTTGCTACTCGGTAT+GGG - chr2.4:18292966-18292985 MS.gene059837:CDS 45.0%
GACGATTGGAGAGCGAATAA+GGG + chr2.4:18289092-18289111 None:intergenic 45.0%
GAGCTAGCAAAGGAATATGC+GGG - chr2.4:18292905-18292924 MS.gene059837:CDS 45.0%
GAGGCTCCATGATAGGAATA+AGG + chr2.4:18289883-18289902 None:intergenic 45.0%
GATACTACAGAAGGCTGCAA+AGG + chr2.4:18290642-18290661 None:intergenic 45.0%
GCAGTGGCTTCTATTACTGA+TGG - chr2.4:18292782-18292801 MS.gene059837:intron 45.0%
GCGTAAGTTGCCAGTTTGTA+TGG + chr2.4:18290188-18290207 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + chr2.4:18289982-18290001 None:intergenic 45.0%
GCTTCTAAACTTGTACCCCA+AGG - chr2.4:18291119-18291138 MS.gene059837:intron 45.0%
GGGTAACAAATCTGAATCGC+TGG - chr2.4:18291869-18291888 MS.gene059837:intron 45.0%
GGTCCAATACCATCTTCAGA+GGG - chr2.4:18290978-18290997 MS.gene059837:intron 45.0%
GGTGGGATTTGATATGTAGG+TGG + chr2.4:18289705-18289724 None:intergenic 45.0%
GTCCAATACCATCTTCAGAG+GGG - chr2.4:18290979-18290998 MS.gene059837:intron 45.0%
GTCGAGGAAACACCAAGATT+GGG - chr2.4:18289855-18289874 MS.gene059837:intron 45.0%
GTGGGTACAAATTCACCTGA+CGG + chr2.4:18290106-18290125 None:intergenic 45.0%
GTTATGGACAGAGGCTTTCT+TGG - chr2.4:18290556-18290575 MS.gene059837:intron 45.0%
TAACACAGCCGTTGAAGGTT+AGG - chr2.4:18289249-18289268 MS.gene059837:CDS 45.0%
TACGTATTGGAACCCCTTTC+CGG - chr2.4:18289472-18289491 MS.gene059837:intron 45.0%
TACTCTAGTCTCATCCTAGG+AGG + chr2.4:18289776-18289795 None:intergenic 45.0%
TAGGATGAGACTAGAGTAGC+AGG - chr2.4:18289778-18289797 MS.gene059837:intron 45.0%
TAGTTTCAAGGGGGAGAAAG+TGG + chr2.4:18289726-18289745 None:intergenic 45.0%
TCCTAGGAGGGCAATAGAAA+GGG + chr2.4:18289763-18289782 None:intergenic 45.0%
TGCTACTCTAGTCTCATCCT+AGG + chr2.4:18289779-18289798 None:intergenic 45.0%
TGTCGAGGAAACACCAAGAT+TGG - chr2.4:18289854-18289873 MS.gene059837:intron 45.0%
TTCTCTCAATCAATGGGCGT+GGG + chr2.4:18290899-18290918 None:intergenic 45.0%
TTGCACTAAAAAGGGCAACC+CGG - chr2.4:18289915-18289934 MS.gene059837:intron 45.0%
! CCTCTCAATTATAGGTGTCG+AGG - chr2.4:18289839-18289858 MS.gene059837:intron 45.0%
! CTGCAGAACTAATGGGTAGA+AGG - chr2.4:18291518-18291537 MS.gene059837:intron 45.0%
! CTGGGTGGGTTCACAATATT+TGG - chr2.4:18290314-18290333 MS.gene059837:intron 45.0%
! CTTGGTGACACTGACCAAAA+TGG + chr2.4:18290288-18290307 None:intergenic 45.0%
! GGGGAGATTTAGTTTCAAGG+GGG + chr2.4:18289735-18289754 None:intergenic 45.0%
! GGTGTTATCCGATCCTACTT+AGG + chr2.4:18291173-18291192 None:intergenic 45.0%
! TCCTGTGTTGGTCGAATTCT+GGG - chr2.4:18292838-18292857 MS.gene059837:intron 45.0%
! TGGTTCTTGTTTCTTCGGCT+GGG + chr2.4:18292341-18292360 None:intergenic 45.0%
! TTCCTGTGTTGGTCGAATTC+TGG - chr2.4:18292837-18292856 MS.gene059837:intron 45.0%
!! GGAGAAGGATTCGAGTTGTA+CGG + chr2.4:18289071-18289090 None:intergenic 45.0%
!!! AAATTTCGGGTTTTCGGGTC+GGG + chr2.4:18291797-18291816 None:intergenic 45.0%
!!! CAAATTTCGGGTTTTCGGGT+CGG + chr2.4:18291798-18291817 None:intergenic 45.0%
!! AATTTCAATAAATATTTATT+TGG + chr2.4:18290262-18290281 None:intergenic 5.0%
AAACTCGCGATCCAACTCGT+AGG + chr2.4:18292015-18292034 None:intergenic 50.0%
ACTCCATGAGGCTCCATGAT+AGG + chr2.4:18289890-18289909 None:intergenic 50.0%
AGCCGTTGAAGGTTAGGGTT+CGG - chr2.4:18289255-18289274 MS.gene059837:CDS 50.0%
AGTGCAATGTAGACTCCTCC+TGG + chr2.4:18290037-18290056 None:intergenic 50.0%
ATGGGATGAATCATGCGGCA+GGG + chr2.4:18292878-18292897 None:intergenic 50.0%
CAGTGTCACCAAGACACTTC+TGG - chr2.4:18290295-18290314 MS.gene059837:intron 50.0%
CATAAGTAGGGTCCGGAAAG+GGG + chr2.4:18289487-18289506 None:intergenic 50.0%
CCAATGAGATCGTGAATCGG+GGG - chr2.4:18291191-18291210 MS.gene059837:intron 50.0%
CCATACCGAGTAGCAACTGA+AGG + chr2.4:18292968-18292987 None:intergenic 50.0%
CCTAGGAGGGCAATAGAAAG+GGG + chr2.4:18289762-18289781 None:intergenic 50.0%
CCTTCAGTTGCTACTCGGTA+TGG - chr2.4:18292965-18292984 MS.gene059837:CDS 50.0%
CGACCCGAAAACCCGAAATT+TGG - chr2.4:18291796-18291815 MS.gene059837:intron 50.0%
CGACGATTGGAGAGCGAATA+AGG + chr2.4:18289093-18289112 None:intergenic 50.0%
CGGTCCAATACCATCTTCAG+AGG - chr2.4:18290977-18290996 MS.gene059837:intron 50.0%
CGTGATAACACAGCCGTTGA+AGG - chr2.4:18289244-18289263 MS.gene059837:CDS 50.0%
CTAGGAGGGCAATAGAAAGG+GGG + chr2.4:18289761-18289780 None:intergenic 50.0%
CTGTGACCTCAAGGTCACAA+TGG + chr2.4:18292481-18292500 None:intergenic 50.0%
CTTTCCGGACCCTACTTATG+CGG - chr2.4:18289487-18289506 MS.gene059837:intron 50.0%
GCATAAGTAGGGTCCGGAAA+GGG + chr2.4:18289488-18289507 None:intergenic 50.0%
GGGAGGTGAGATCACAAACT+CGG - chr2.4:18291984-18292003 MS.gene059837:intron 50.0%
GTGTTTCGGATTATGGGCCT+GGG + chr2.4:18289648-18289667 None:intergenic 50.0%
TATGGGATGAATCATGCGGC+AGG + chr2.4:18292879-18292898 None:intergenic 50.0%
TCACCAAGACACTTCTGGGT+GGG - chr2.4:18290300-18290319 MS.gene059837:intron 50.0%
TCTACCTTGCTTGTGCCCTT+GGG + chr2.4:18291138-18291157 None:intergenic 50.0%
TGAATCGGGGGATCGTAACA+CGG - chr2.4:18291203-18291222 MS.gene059837:intron 50.0%
TGGAGAGCGAATAAGGGAGA+AGG + chr2.4:18289086-18289105 None:intergenic 50.0%
TGGGCCATTTCACCTTAGCT+GGG + chr2.4:18289629-18289648 None:intergenic 50.0%
TGTGTTTCGGATTATGGGCC+TGG + chr2.4:18289649-18289668 None:intergenic 50.0%
TTCAAGGGGGAGAAAGTGGT+GGG + chr2.4:18289722-18289741 None:intergenic 50.0%
TTCCGATTCCGACGACTTTC+CGG - chr2.4:18291952-18291971 MS.gene059837:intron 50.0%
TTTCAAGGGGGAGAAAGTGG+TGG + chr2.4:18289723-18289742 None:intergenic 50.0%
TTTCCGGACCCTACTTATGC+GGG - chr2.4:18289488-18289507 MS.gene059837:intron 50.0%
! CAACACCTCGTGAAAGGCAT+TGG + chr2.4:18290080-18290099 None:intergenic 50.0%
! CATAAGAGGCTGTTTCCAGG+AGG - chr2.4:18290019-18290038 MS.gene059837:intron 50.0%
! CTCCCCTCTGAAGATGGTAT+TGG + chr2.4:18290984-18291003 None:intergenic 50.0%
! CTGGTTCTTGTTTCTTCGGC+TGG + chr2.4:18292342-18292361 None:intergenic 50.0%
!! ATGCGGGAGCTTTATTGCAC+CGG - chr2.4:18289504-18289523 MS.gene059837:intron 50.0%
!! GAAGGATTCGAGTTGTACGG+TGG + chr2.4:18289068-18289087 None:intergenic 50.0%
!! GGAAATTTGTTGTCGCGGCT+TGG + chr2.4:18291936-18291955 None:intergenic 50.0%
AAGTCATGCAGTGGCCACGT+GGG + chr2.4:18290143-18290162 None:intergenic 55.0%
ACCGCGACGAACAACATTCG+AGG + chr2.4:18289203-18289222 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - chr2.4:18289941-18289960 MS.gene059837:intron 55.0%
ACTCGGACGATCCTACGAGT+TGG - chr2.4:18292001-18292020 MS.gene059837:intron 55.0%
AGACTAGAGTAGCAGGGCAC+GGG - chr2.4:18289785-18289804 MS.gene059837:intron 55.0%
AGCTCCTTGTCTTCTCGGGA+AGG - chr2.4:18291002-18291021 MS.gene059837:intron 55.0%
AGCTTGAGGCCGGTGTATTG+AGG + chr2.4:18289142-18289161 None:intergenic 55.0%
AGGGCAATAGAAAGGGGGTG+AGG + chr2.4:18289756-18289775 None:intergenic 55.0%
AGGGGAGCTCCTTGTCTTCT+CGG - chr2.4:18290997-18291016 MS.gene059837:intron 55.0%
ATCACGAGCCTCACACACGA+CGG + chr2.4:18289230-18289249 None:intergenic 55.0%
ATTCCGACGACTTTCCGGCA+CGG - chr2.4:18291957-18291976 MS.gene059837:intron 55.0%
CAGCTAAGGTGAAATGGCCC+AGG - chr2.4:18289628-18289647 MS.gene059837:intron 55.0%
CCCCCGATTCACGATCTCAT+TGG + chr2.4:18291194-18291213 None:intergenic 55.0%
CCCCTTTCTATTGCCCTCCT+AGG - chr2.4:18289759-18289778 MS.gene059837:intron 55.0%
CGACGAACAACATTCGAGGC+GGG + chr2.4:18289199-18289218 None:intergenic 55.0%
CGCATAAGTAGGGTCCGGAA+AGG + chr2.4:18289489-18289508 None:intergenic 55.0%
CGGTGACAACACCTCGTGAA+AGG + chr2.4:18290086-18290105 None:intergenic 55.0%
CTACCCTTCCCGAGAAGACA+AGG + chr2.4:18291009-18291028 None:intergenic 55.0%
CTACCTTGCTTGTGCCCTTG+GGG + chr2.4:18291137-18291156 None:intergenic 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr2.4:18289942-18289961 MS.gene059837:intron 55.0%
CTGACGGGAATTCCCAGCTA+AGG - chr2.4:18289614-18289633 MS.gene059837:intron 55.0%
CTGGGCCATTTCACCTTAGC+TGG + chr2.4:18289630-18289649 None:intergenic 55.0%
GAATTCTGGGCTCCATGGTG+TGG - chr2.4:18292851-18292870 MS.gene059837:intron 55.0%
GACTGCAACTGATGGGAGCT+TGG - chr2.4:18292563-18292582 MS.gene059837:intron 55.0%
GAGACTAGAGTAGCAGGGCA+CGG - chr2.4:18289784-18289803 MS.gene059837:intron 55.0%
GCCCAGAATTCGACCAACAC+AGG + chr2.4:18292842-18292861 None:intergenic 55.0%
GCCGCGTTTCCTCAATACAC+CGG - chr2.4:18289130-18289149 MS.gene059837:CDS 55.0%
GCCGGTGTATTGAGGAAACG+CGG + chr2.4:18289134-18289153 None:intergenic 55.0%
GCCTCGAATGTTGTTCGTCG+CGG - chr2.4:18289199-18289218 MS.gene059837:CDS 55.0%
GCGACGAACAACATTCGAGG+CGG + chr2.4:18289200-18289219 None:intergenic 55.0%
GCTCCTTGTCTTCTCGGGAA+GGG - chr2.4:18291003-18291022 MS.gene059837:intron 55.0%
GGCAATAGAAAGGGGGTGAG+GGG + chr2.4:18289754-18289773 None:intergenic 55.0%
GGGCAATAGAAAGGGGGTGA+GGG + chr2.4:18289755-18289774 None:intergenic 55.0%
GTCACCAAGACACTTCTGGG+TGG - chr2.4:18290299-18290318 MS.gene059837:intron 55.0%
GTCTACCTTGCTTGTGCCCT+TGG + chr2.4:18291139-18291158 None:intergenic 55.0%
GTGGACCAATGCCTTTCACG+AGG - chr2.4:18290072-18290091 MS.gene059837:intron 55.0%
TACCCAGAAATCCGGGTTCG+CGG + chr2.4:18291854-18291873 None:intergenic 55.0%
TCGAATGTTGTTCGTCGCGG+TGG - chr2.4:18289202-18289221 MS.gene059837:CDS 55.0%
TGCCGGAAAGTCGTCGGAAT+CGG + chr2.4:18291957-18291976 None:intergenic 55.0%
TGGTCGAATTCTGGGCTCCA+TGG - chr2.4:18292846-18292865 MS.gene059837:intron 55.0%
! AAGGAGCTCCCCTCTGAAGA+TGG + chr2.4:18290990-18291009 None:intergenic 55.0%
!! GAACCCACCCAGAAGTGTCT+TGG + chr2.4:18290306-18290325 None:intergenic 55.0%
!! TGCGGGAGCTTTATTGCACC+GGG - chr2.4:18289505-18289524 MS.gene059837:intron 55.0%
ACCCAGAAATCCGGGTTCGC+GGG + chr2.4:18291853-18291872 None:intergenic 60.0%
ACCCGCGAACCCGGATTTCT+GGG - chr2.4:18291849-18291868 MS.gene059837:intron 60.0%
ACGACTTTCCGGCACGGCAA+GGG - chr2.4:18291963-18291982 MS.gene059837:intron 60.0%
AGAAATCCGGGTTCGCGGGT+CGG + chr2.4:18291849-18291868 None:intergenic 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr2.4:18289954-18289973 MS.gene059837:intron 60.0%
CTCCAATCGTCGCTTCTCGC+CGG - chr2.4:18289101-18289120 MS.gene059837:CDS 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr2.4:18289954-18289973 None:intergenic 60.0%
GAAGTCATGCAGTGGCCACG+TGG + chr2.4:18290144-18290163 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr2.4:18289953-18289972 MS.gene059837:intron 60.0%
GCTCCCGCATAAGTAGGGTC+CGG + chr2.4:18289494-18289513 None:intergenic 60.0%
GGGGAGCTCCTTGTCTTCTC+GGG - chr2.4:18290998-18291017 MS.gene059837:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr2.4:18289953-18289972 None:intergenic 60.0%
TTGACTCCGCAGACGAGTGG+CGG + chr2.4:18289176-18289195 None:intergenic 60.0%
TTGCCGTGCCGGAAAGTCGT+CGG + chr2.4:18291963-18291982 None:intergenic 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + chr2.4:18289937-18289956 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr2.4:18289969-18289988 None:intergenic 60.0%
! GTACCCCAAGGGCACAAGCA+AGG - chr2.4:18291131-18291150 MS.gene059837:intron 60.0%
!! CACGAGGTGTTGTCACCGTC+AGG - chr2.4:18290088-18290107 MS.gene059837:intron 60.0%
ATGCGGCAGGGACCACACCA+TGG + chr2.4:18292866-18292885 None:intergenic 65.0%
CAGTCTCCGCCACTCGTCTG+CGG - chr2.4:18289167-18289186 MS.gene059837:CDS 65.0%
CGACTTTCCGGCACGGCAAG+GGG - chr2.4:18291964-18291983 MS.gene059837:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr2.4:18289952-18289971 MS.gene059837:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr2.4:18289967-18289986 MS.gene059837:intron 65.0%
CGGTGGAACCGTCGTGTGTG+AGG - chr2.4:18289219-18289238 MS.gene059837:CDS 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr2.4:18289948-18289967 MS.gene059837:intron 65.0%
CTCCGGCGAGAAGCGACGAT+TGG + chr2.4:18289106-18289125 None:intergenic 65.0%
GACCCGCGAACCCGGATTTC+TGG - chr2.4:18291848-18291867 MS.gene059837:intron 65.0%
GACGACTTTCCGGCACGGCA+AGG - chr2.4:18291962-18291981 MS.gene059837:intron 65.0%
GAGGAAACGCGGCAGTGCTC+CGG + chr2.4:18289123-18289142 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr2.4:18289947-18289966 MS.gene059837:intron 65.0%
TTCGGGTCGGGTTCGTGACC+CGG + chr2.4:18291785-18291804 None:intergenic 65.0%
! CGGAGACTGGTCGGAGCTTG+AGG + chr2.4:18289156-18289175 None:intergenic 65.0%
! GACGAGTGGCGGAGACTGGT+CGG + chr2.4:18289165-18289184 None:intergenic 65.0%
! GACTGGTCGGAGCTTGAGGC+CGG + chr2.4:18289152-18289171 None:intergenic 65.0%
! GGGTTGACTCCGCAGACGAG+TGG + chr2.4:18289179-18289198 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG + chr2.4:18289936-18289955 None:intergenic 65.0%
CACGAACCGACCCGCGAACC+CGG - chr2.4:18291840-18291859 MS.gene059837:intron 70.0%
CTCACCTCCCCTTGCCGTGC+CGG + chr2.4:18291974-18291993 None:intergenic 70.0%
CTTTCCGGCACGGCAAGGGG+AGG - chr2.4:18291967-18291986 MS.gene059837:intron 70.0%
! CGCAGACGAGTGGCGGAGAC+TGG + chr2.4:18289169-18289188 None:intergenic 70.0%
!! TCGCGGGTCGGTTCGTGACC+CGG + chr2.4:18291837-18291856 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 18289061 18293099 18289061 ID=MS.gene059837
chr2.4 mRNA 18289061 18293099 18289061 ID=MS.gene059837.t1;Parent=MS.gene059837
chr2.4 exon 18292895 18293099 18292895 ID=MS.gene059837.t1.exon1;Parent=MS.gene059837.t1
chr2.4 CDS 18292895 18293099 18292895 ID=cds.MS.gene059837.t1;Parent=MS.gene059837.t1
chr2.4 exon 18289061 18289374 18289061 ID=MS.gene059837.t1.exon2;Parent=MS.gene059837.t1
chr2.4 CDS 18289061 18289374 18289061 ID=cds.MS.gene059837.t1;Parent=MS.gene059837.t1
Gene Sequence

>MS.gene059837

ATGGCCACCGTACAACTCGAATCCTTCTCCCTTATTCGCTCTCCAATCGTCGCTTCTCGCCGGAGCACTGCCGCGTTTCCTCAATACACCGGCCTCAAGCTCCGACCAGTCTCCGCCACTCGTCTGCGGAGTCAACCCGCCTCGAATGTTGTTCGTCGCGGTGGAACCGTCGTGTGTGAGGCTCGTGATAACACAGCCGTTGAAGGTTAGGGTTCGGTTAATCTTAACTTAAAATTGATGTTGAAATTTTGTTGTTTTAGATCTGTTGAAAGTGATTGGTTTATGTGATCCTATGTGACTGTGAGTAAGAATTTTCATACCAATGACAAATTAGTTCCTCCGTTAGTTTTGTAAGTCACCTAGATTTTTTTTTCCCCCAGTTGCTAGAGTTTTAAAAGCTGAAATTTAGTGTACGTATTGGAACCCCTTTCCGGACCCTACTTATGCGGGAGCTTTATTGCACCGGGCTGCCCTTTTAGTGTATTATTCTTTTAGTCGATTTGTTAGCAAACAAACATTCAGAATGAAGCTAGAAATATAACATTGACATTAACTGACGGGAATTCCCAGCTAAGGTGAAATGGCCCAGGCCCATAATCCGAAACACATGAAATATACGCATGCTCAACTATATTGCTTTACCACCTACATATCAAATCCCACCACTTTCTCCCCCTTGAAACTAAATCTCCCCTCACCCCCTTTCTATTGCCCTCCTAGGATGAGACTAGAGTAGCAGGGCACGGGTGTTGTGTCTTCAATTGTAGACATTGAAAGGCCTCTCAATTATAGGTGTCGAGGAAACACCAAGATTGGGTTCCTTATTCCTATCATGGAGCCTCATGGAGTCTACATTGCACTAAAAAGGGCAACCCGGTGCACTAGAGCTCCCGCATATGCAGGGTCCGGGAAGGGGTCCCACCATTTGGTGTATTGTACGCAACCTTACCCTGTTTTACATAAGAGGCTGTTTCCAGGAGGAGTCTACATTGCACTATATATATATATCACGTGGACCAATGCCTTTCACGAGGTGTTGTCACCGTCAGGTGAATTTGTACCCACATGCTAATTTTTTACCCACGTGGCCACTGCATGACTTCAACAATGTTTTTCTTTAAGAGCCATACAAACTGGCAACTTACGCGACATGCCAAATACATTCCTAACTAGTTAATAGTTTCAAACATGCCATGTTCCAAATAAATATTTATTGAAATTAAGCCATTTTGGTCAGTGTCACCAAGACACTTCTGGGTGGGTTCACAATATTTGGCCTAATATTCATAATGTTAGGTTGAGCTCCCAATATTTGGTTTGGGGCTTTAGCTCATTGAACATCATCACACATAAGGTGAAGTTGTTAACCATGGGCAAATAGAAAAAATGGAATGCATATAGACTAAGATTAGATACCTAAGCATGTTATGCAGTTTTTGGTTTCACTAAATGCCACTTAATGGGTCTGTTATTTTTGTAGTTGCTTACTCTAATAGTTATGGACAGAGGCTTTCTTGGACCAAAATTCGAGCGATTCTAGTTTTATATCTCTTATAATTATTATTATTTTTTTGCTCTCCTTTGCAGCCTTCTGTAGTATCTTAGCATGAAACTTTATAGATTCCAATTCACATGCTCTTGAATGGATGACTACTTTCCCTTGAATAACTGACATATATGATGATTCATCTCATTTACTTTTTATTGTAAAATCGACCTAGTTGATTAGATGAGTTATACGACAGGATAGTGAAGAAGTTTGTGTTGAGTCTAATTACATGGTAAGAAGTTTGTGTCAAAATTGATGAAATAGAACTTCCTTTAATAAAGATGGTCCCACGCCCATTGATTGAGAGAATCAGAGAAGCTGTTTATGAGTATTAGTGTTGGAATTAAAGGATAAATTGAATGTCGAGCGGTCCAATACCATCTTCAGAGGGGAGCTCCTTGTCTTCTCGGGAAGGGTAGATTTTAGCTACTACCTTATTAATTTAGGCCTTCGTGTTATAGAAGTAAGGGAAACTAAAAATAGAATTAAAAGAGATGTTTCTATGTTTAGCTTCTAAACTTGTACCCCAAGGGCACAAGCAAGGTAGACAAACTCGAGATCCTAAGTAGGATCGGATAACACCAATGAGATCGTGAATCGGGGGATCGTAACACGGATCGTAAGATCCTACCAAATTTAGAAATTCATATATATTGCATATAAATTCATACATATTCATATGAAGCAACATAATTTAATAGAAAAATAACTTTAAATAACCTCAAATTCATTAGCAAGAGCACATTAAAACAACTTAAAACAGCTCTAAAATTCAAAACAGTAGCACTGCAGACCAGAACAGAAAAAAAAAAACACTTAAAAAGCTTCAAAATCATCTCAATGGTCATTTCCAAACAATTCATGTTGAAGAAGGTCATAGTCACATTAAAAGAAGGAAGGATTGTAATCTGCAGAACTAATGGGTAGAAGGCTGAATAAATAATTAACGTGAGAGAGGGAATTGAGTGCTACGAATATGTGAATTGCACAGGTAAAGTTCCATGATTTATGGGTGTATTGGAAAATTTCCCTAATTATTGATAGTGGCTTTATTGGGAAGATTTTTAGTAATCAATTGGTTTAATGACAGAATTTGAAACCGTTTCAGAGAATAAGAAGAATGAATCACATTTTTTTTGCCTTTAATTTCGGAAAAAACGTTTTGAATCAATCCGGGTCACGAACCCGACCCGAAAACCCGAAATTTGGTTAGCAAAACATAAACCGGGTCACGAACCGACCCGCGAACCCGGATTTCTGGGTAACAAATCTGAATCGCTGGAAACGTGCGATACAACCGATTCTGCGTTTTTCAACGACGATCCAAGCCGCGACAACAAATTTCCGATTCCGACGACTTTCCGGCACGGCAAGGGGAGGTGAGATCACAAACTCGGACGATCCTACGAGTTGGATCGCGAGTTTGTCTATTTTGGGCACAAGATATCATTTCCCTAGAAGTAATTATGGTGTTAGTTTCACAATCATTTTGAGAATAGTAACGATAAATTATGAGAACTCTTAATAATCTAGATCAATTTATTAGATTTTGAAGCATTCAGGATTGATGTGCTGGTGGAGTACTAATACTAGTATTTGTTGGTAACTTGGTATGAATCGTATGATGTGATTGCTGTTACTTTTCACAATCCTTTGACCAATATCTTACTTTGTATTTGTGTGCGTTGTTTCAATAAGCATGCTAAAATGGTATAGCTTTTGGTGATTCCCAGCCGAAGAAACAAGAACCAGAACTCTGATTTTATTTTTATTTTAATAAAAAAATAAAAAAAGTTCATTTTTATAATCCAACTTGAACATATATTTTTAGTAGTATTTTGTATTTTAGAGAGTCTGCCTTGATTCAACCATTGTGACCTTGAGGTCACAGATTCAAATATTGGAAACAACCTCTCTGCTTGTATGCTTAAGACTGTGCATCTATCTTACTCAGACTGCAACTGATGGGAGCTTGGCTCATTGAGCTGCCATTTATGTTTTTCAATTTTTTGATGCATTTATCATCTGGTTTGCATGTTTTGCAGTTCAGGATTTTGCATCACTGTAAATGTGTAATTTGTGATCAAAGTTCTAACTATCTTCTGATTTGTTTTCAGAGACTTGTATGAGTGAAATTTTTAGTGTAGTTAAACTTATGTTTTATTGGATATTGCAGTGGCTTCTATTACTGATGGAAATTGGCAATCCCTTGTCATAGAATCTGAGATTCCTGTGTTGGTCGAATTCTGGGCTCCATGGTGTGGTCCCTGCCGCATGATTCATCCCATAGTTGATGAGCTAGCAAAGGAATATGCGGGTAAGCTCAAGTGTTACAAACTCAATACTGATGAAAGTCCTTCAGTTGCTACTCGGTATGGGATTCGAAGTATTCCAACTGTCATTTTCTTCAAGAACGGTGAAAAGAAAGATACAGTTATTGGTGCTGTGCCCAAAGCAACATTGACCACAAATATAGAAAAATTCCTGTGA

Protein sequence

>MS.gene059837.t1

MATVQLESFSLIRSPIVASRRSTAAFPQYTGLKLRPVSATRLRSQPASNVVRRGGTVVCEARDNTAVEVASITDGNWQSLVIESEIPVLVEFWAPWCGPCRMIHPIVDELAKEYAGKLKCYKLNTDESPSVATRYGIRSIPTVIFFKNGEKKDTVIGAVPKATLTTNIEKFL