AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98555

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98555.t1 MTR_5g085200 99.052 422 4 0 1 422 1 422 0.0 868
MS.gene98555.t1 MTR_7g079840 43.440 343 154 10 40 350 13 347 5.91e-90 278
MS.gene98555.t1 MTR_7g079840 43.440 343 154 10 40 350 23 357 6.48e-90 278
MS.gene98555.t1 MTR_3g075190 38.806 335 163 11 44 358 171 483 1.36e-66 221
MS.gene98555.t1 MTR_4g104260 37.695 321 169 11 44 347 231 537 3.36e-66 221
MS.gene98555.t1 MTR_1g088875 35.780 327 173 8 19 318 27 343 8.22e-63 206
MS.gene98555.t1 MTR_1g088875 55.263 76 30 2 271 343 92 166 2.89e-18 85.9
MS.gene98555.t1 MTR_1g088875 35.780 327 173 8 19 318 27 343 9.16e-63 206
MS.gene98555.t1 MTR_1g088875 55.263 76 30 2 271 343 92 166 3.05e-18 85.9
MS.gene98555.t1 MTR_1g088875 35.780 327 173 8 19 318 27 343 1.11e-62 206
MS.gene98555.t1 MTR_1g088875 55.263 76 30 2 271 343 92 166 2.98e-18 85.9
MS.gene98555.t1 MTR_2g019740 37.209 344 173 11 44 348 44 383 2.50e-60 203
MS.gene98555.t1 MTR_2g019740 44.578 83 45 1 84 165 42 124 3.69e-18 86.7
MS.gene98555.t1 MTR_2g019740 34.615 130 36 2 269 349 43 172 1.13e-14 76.3
MS.gene98555.t1 MTR_8g446930 33.524 349 134 9 38 343 31 324 7.02e-56 189
MS.gene98555.t1 MTR_8g446930 34.074 135 49 3 268 368 79 207 6.44e-16 79.0
MS.gene98555.t1 MTR_8g446930 33.428 353 137 9 34 343 177 474 7.46e-55 190
MS.gene98555.t1 MTR_8g446930 28.413 271 108 8 132 368 139 357 3.94e-20 92.8
MS.gene98555.t1 MTR_4g119280 36.686 338 155 13 44 343 43 359 1.49e-47 167
MS.gene98555.t1 MTR_4g119280 34.688 320 177 12 26 319 66 379 2.90e-35 134
MS.gene98555.t1 MTR_4g119280 48.148 81 42 0 84 164 41 121 6.84e-19 88.2
MS.gene98555.t1 MTR_4g119280 45.570 79 42 1 269 346 42 120 4.78e-15 76.6
MS.gene98555.t1 MTR_4g119280 36.686 338 155 13 44 343 43 359 6.06e-47 169
MS.gene98555.t1 MTR_4g119280 35.942 345 189 12 26 344 66 404 1.55e-45 165
MS.gene98555.t1 MTR_4g119280 48.148 81 42 0 84 164 41 121 1.02e-18 88.6
MS.gene98555.t1 MTR_4g119280 45.570 79 42 1 269 346 42 120 6.01e-15 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98555.t1 AT1G04990 44.893 421 191 10 1 403 5 402 1.28e-115 344
MS.gene98555.t1 AT1G04990 44.893 421 191 10 1 403 5 402 1.28e-115 344
MS.gene98555.t1 AT1G04990 44.893 421 191 10 1 403 5 402 1.28e-115 344
MS.gene98555.t1 AT2G32930 49.030 361 146 10 1 345 1 339 7.28e-109 328
MS.gene98555.t1 AT1G04990 42.721 419 183 10 1 403 5 382 8.84e-107 320
MS.gene98555.t1 AT2G32930 47.922 361 146 11 1 345 1 335 2.45e-103 314
MS.gene98555.t1 AT2G32930 44.153 419 179 12 27 412 1 397 1.80e-102 311
MS.gene98555.t1 AT3G02830 39.312 407 185 17 21 392 18 397 1.53e-84 264
MS.gene98555.t1 AT3G02830 40.306 392 176 16 36 392 9 377 4.21e-84 262
MS.gene98555.t1 AT2G47850 38.701 354 183 9 19 350 27 368 1.58e-80 256
MS.gene98555.t1 AT2G47850 38.701 354 183 9 19 350 27 368 1.58e-80 256
MS.gene98555.t1 AT5G18550 42.683 328 154 13 44 342 48 370 2.34e-80 255
MS.gene98555.t1 AT5G18550 39.175 97 48 3 269 354 47 143 6.22e-16 80.1
MS.gene98555.t1 AT5G18550 42.683 328 154 13 44 342 16 338 2.37e-80 254
MS.gene98555.t1 AT5G18550 39.175 97 48 3 269 354 15 111 8.14e-16 79.3
MS.gene98555.t1 AT5G18550 42.683 328 154 13 44 342 48 370 4.25e-80 254
MS.gene98555.t1 AT5G18550 39.175 97 48 3 269 354 47 143 7.34e-16 79.7
MS.gene98555.t1 AT5G16540 39.601 351 170 12 44 383 39 358 1.92e-77 245
MS.gene98555.t1 AT5G16540 43.038 79 44 1 266 343 35 113 1.81e-14 75.1
MS.gene98555.t1 AT5G16540 36.471 85 46 2 37 115 233 315 1.00e-13 72.8
MS.gene98555.t1 AT5G16540 39.601 351 170 12 44 383 18 337 2.24e-77 244
MS.gene98555.t1 AT5G16540 43.038 79 44 1 266 343 14 92 1.72e-14 74.7
MS.gene98555.t1 AT5G16540 36.471 85 46 2 37 115 212 294 1.25e-13 72.4
MS.gene98555.t1 AT3G06410 38.843 363 169 12 20 342 29 378 2.68e-77 247
MS.gene98555.t1 AT3G06410 44.156 77 41 1 269 343 50 126 5.48e-16 80.1
MS.gene98555.t1 AT1G04990 41.846 325 153 8 96 403 16 321 4.68e-76 239
MS.gene98555.t1 AT1G04990 40.909 88 51 1 74 160 165 252 1.45e-13 71.6
MS.gene98555.t1 AT5G18550 41.284 327 147 13 44 342 48 357 3.66e-73 236
MS.gene98555.t1 AT5G18550 39.175 97 48 3 269 354 47 143 5.73e-16 80.1
MS.gene98555.t1 AT5G16540 38.329 347 173 11 44 383 39 351 1.82e-72 232
MS.gene98555.t1 AT5G16540 43.038 79 44 1 266 343 35 113 1.59e-14 75.1
MS.gene98555.t1 AT5G16540 35.366 82 44 2 37 115 233 308 8.60e-12 66.6
MS.gene98555.t1 AT3G48440 39.450 327 158 14 44 344 107 419 1.55e-67 221
MS.gene98555.t1 AT3G48440 52.500 80 37 1 84 162 341 420 2.37e-20 93.2
MS.gene98555.t1 AT1G04990 39.009 323 145 8 96 403 16 301 4.77e-67 216
MS.gene98555.t1 AT5G63260 36.494 348 189 11 19 344 70 407 9.65e-67 219
MS.gene98555.t1 AT5G63260 37.574 338 166 11 42 344 96 423 3.33e-65 216
MS.gene98555.t1 AT2G47850 34.278 353 174 11 19 350 27 342 3.33e-61 205
MS.gene98555.t1 AT5G16540 39.576 283 132 10 44 318 18 269 3.97e-59 194
MS.gene98555.t1 AT5G16540 47.500 80 40 1 266 343 59 138 8.36e-20 89.4
MS.gene98555.t1 AT5G16540 43.038 79 44 1 266 343 14 92 9.95e-15 74.3
MS.gene98555.t1 AT3G12680 36.232 345 159 12 44 343 171 499 2.81e-56 194
MS.gene98555.t1 AT3G12680 43.023 86 38 2 41 115 414 499 3.52e-16 80.9
MS.gene98555.t1 AT2G47850 35.918 245 137 6 124 350 4 246 1.36e-42 153
MS.gene98555.t1 AT2G47850 49.398 83 41 1 79 160 157 239 6.48e-22 96.7
MS.gene98555.t1 AT2G47850 41.975 81 33 2 44 115 164 239 2.21e-15 77.4
MS.gene98555.t1 AT1G48195 46.753 77 39 1 268 342 4 80 3.35e-20 85.1
MS.gene98555.t1 AT1G48195 46.753 77 40 1 84 159 4 80 1.93e-17 77.4
MS.gene98555.t1 AT1G48195 48.000 75 35 1 44 114 6 80 1.30e-16 74.7
MS.gene98555.t1 AT1G29600 44.578 83 36 4 41 122 125 198 6.04e-15 75.9
MS.gene98555.t1 AT1G29600 44.578 83 36 4 41 122 119 192 6.97e-15 75.5

Find 112 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGTGCTATCCTTTCTTT+AGG 0.127413 5.2:+72562521 None:intergenic
TGCAGCACCTCTCCTGTCTT+TGG 0.215706 5.2:+72563617 None:intergenic
CCGGCGGGAGAGACACTTTC+TGG 0.243331 5.2:-72562653 MS.gene98555:CDS
AGACCCAGTTCTCATGTAAT+AGG 0.260132 5.2:+72563427 None:intergenic
TGGACAGTTGAAAGCCTTCT+TGG 0.267807 5.2:+72562023 None:intergenic
AGAACTGGGTCTTGCAAGTT+TGG 0.276971 5.2:-72563416 MS.gene98555:CDS
AGATTTCAGGTTACTCAATA+TGG 0.278926 5.2:-72564735 MS.gene98555:intron
TCTGGTTGCTCAGGTCTATC+TGG 0.304316 5.2:+72562605 None:intergenic
AGCACCGGAACATGCAAATA+TGG 0.322651 5.2:-72562566 MS.gene98555:CDS
TTTGTGCTATCCTTTCTTTA+GGG 0.324288 5.2:+72562522 None:intergenic
TGCTCTTATTACAGAATCTA+TGG 0.326952 5.2:-72562161 MS.gene98555:CDS
GCAGCACCTCTCCTGTCTTT+GGG 0.333423 5.2:+72563618 None:intergenic
TTCGTATTGCAGAAGCTATT+CGG 0.340006 5.2:-72565091 MS.gene98555:intron
CCGAGAATGTCATATTTATC+TGG 0.351902 5.2:-72563257 MS.gene98555:CDS
ACCTTCGTCCGAGTCTTTAC+AGG 0.352984 5.2:-72561886 MS.gene98555:CDS
ATCTATGGAGTATGCAAGTT+TGG 0.357289 5.2:-72562146 MS.gene98555:CDS
CCAGATAAATATGACATTCT+CGG 0.368337 5.2:+72563257 None:intergenic
CCACAACAGGCAGCTTCCTT+TGG 0.370576 5.2:-72563371 MS.gene98555:CDS
TCCACAACTGTTACTTCATC+AGG 0.377937 5.2:-72563317 MS.gene98555:CDS
GCATTATGCCTGCGCTGAGC+TGG 0.382644 5.2:-72563187 MS.gene98555:CDS
GAGGGAGGGGACGCCGCCAC+TGG 0.385507 5.2:+72563338 None:intergenic
CTATCCTTTCTTTAGGGTGG+TGG 0.386879 5.2:+72562528 None:intergenic
ATAAAACCAGTAGGCATTGC+AGG 0.387637 5.2:+72562707 None:intergenic
AAGACAGGAACATGTAAGTA+TGG 0.393613 5.2:-72563663 MS.gene98555:CDS
TGTCCCTATTACATGAGAAC+TGG 0.394120 5.2:-72563431 MS.gene98555:CDS
CCCGTTGTCTTCAATACTTT+AGG 0.398288 5.2:-72563594 MS.gene98555:CDS
CTCAAATAATATACGCAGTC+AGG 0.416206 5.2:+72564993 None:intergenic
CTGACTGCGTATATTATTTG+AGG 0.418766 5.2:-72564992 MS.gene98555:CDS
TATTTACAGTCTGGTTGCTC+AGG 0.430194 5.2:+72562596 None:intergenic
GCCTCAATCAATGCCTTATC+CGG 0.436673 5.2:-72565030 MS.gene98555:CDS
AATGCACTTACAGGTCTCAT+AGG 0.440267 5.2:+72562473 None:intergenic
CTCATAAAGTATTTACAGTC+TGG 0.442202 5.2:+72562587 None:intergenic
AAAGCCTTCTTGGACTAGTA+AGG 0.442412 5.2:+72562033 None:intergenic
AAGAACTTCCTGAGAGAGTT+GGG 0.442954 5.2:-72564710 MS.gene98555:CDS
GCAGGAAACCCACCAGCATA+TGG 0.444203 5.2:+72563290 None:intergenic
TCAGGTTGCCCAACTCTCTC+AGG 0.445004 5.2:+72564702 None:intergenic
TTCTGAGAGATAGCCACAAC+TGG 0.446204 5.2:+72562101 None:intergenic
TTTAGGTCTTCCCATGCGTC+AGG 0.446654 5.2:-72563577 MS.gene98555:intron
AATAAACATACCTCACAATC+AGG 0.458208 5.2:+72564684 None:intergenic
GACCCAGTTCTCATGTAATA+GGG 0.459797 5.2:+72563428 None:intergenic
GGCATAATGCCTTGTGAAGA+AGG 0.459870 5.2:+72563200 None:intergenic
CAACAGGCAGCTTCCTTTGG+AGG 0.460678 5.2:-72563368 MS.gene98555:CDS
AGATCCATATTTGCATGTTC+CGG 0.472187 5.2:+72562562 None:intergenic
CCATCTGGTGATAACATTGA+AGG 0.474193 5.2:-72565703 MS.gene98555:intron
AGCTTGTTTAGATGAATCTT+CGG 0.476106 5.2:+72561932 None:intergenic
TGCGTATATTATTTGAGGAC+TGG 0.478797 5.2:-72564987 MS.gene98555:CDS
TCACCAGGTCGATCCGGATA+AGG 0.480066 5.2:+72565017 None:intergenic
GGACTGGAATGTGTGGTTAC+GGG 0.482004 5.2:-72564971 MS.gene98555:CDS
CAAGTTTCATCATCCACAAC+AGG 0.488215 5.2:-72563384 MS.gene98555:CDS
TCAGGTTCACCAGGTCGATC+CGG 0.491203 5.2:+72565011 None:intergenic
AATGTCATATTTATCTGGAC+AGG 0.494113 5.2:-72563252 MS.gene98555:CDS
ATTAACCCTGCAATGCCTAC+TGG 0.496129 5.2:-72562713 MS.gene98555:CDS
AATGCTGGTTCTAATCCATC+TGG 0.496458 5.2:-72565718 MS.gene98555:CDS
ATTACAGGTGAAATGTTAGC+AGG 0.497677 5.2:+72564927 None:intergenic
CCTAAAGTATTGAAGACAAC+GGG 0.502456 5.2:+72563594 None:intergenic
CCAAAGGAAGCTGCCTGTTG+TGG 0.502820 5.2:+72563371 None:intergenic
ATGGAGATGTCTCGGTTGGT+TGG 0.505736 5.2:+72562003 None:intergenic
GTGCTATCCTTTCTTTAGGG+TGG 0.514914 5.2:+72562525 None:intergenic
AGGAGGCACATAAGATTGAA+TGG 0.519059 5.2:+72563229 None:intergenic
GAAGAACTTCCTGAGAGAGT+TGG 0.521193 5.2:-72564711 MS.gene98555:CDS
AGGACTGGAATGTGTGGTTA+CGG 0.521390 5.2:-72564972 MS.gene98555:CDS
CCTTCAATGTTATCACCAGA+TGG 0.522380 5.2:+72565703 None:intergenic
AGTAACAGTTGTGGAGGGAG+GGG 0.529224 5.2:+72563325 None:intergenic
TTCGATGGAGATGTCTCGGT+TGG 0.530171 5.2:+72561999 None:intergenic
AATATCATCATCCCAAAGAC+AGG 0.531632 5.2:-72563629 MS.gene98555:CDS
TTGTCAGTTGATTGTTTCGA+TGG 0.531763 5.2:+72561984 None:intergenic
ATGCTGGTGGGTTTCCTGCA+TGG 0.533086 5.2:-72563286 MS.gene98555:CDS
TGTCTACGACTACATGAATC+CGG 0.541765 5.2:-72562672 MS.gene98555:CDS
TATACGCAGTCAGGTTCACC+AGG 0.548463 5.2:+72565002 None:intergenic
TGTAAATACTTTATGAGCAC+CGG 0.550440 5.2:-72562581 MS.gene98555:CDS
AGAGACACTTTCTGGTGGAC+AGG 0.555997 5.2:-72562645 MS.gene98555:CDS
AGTTCCACCACCCTAAAGAA+AGG 0.558473 5.2:-72562532 MS.gene98555:CDS
GAAGTAACAGTTGTGGAGGG+AGG 0.561560 5.2:+72563323 None:intergenic
AAGTAACAGTTGTGGAGGGA+GGG 0.565711 5.2:+72563324 None:intergenic
TTGTTTCGATGGAGATGTCT+CGG 0.567749 5.2:+72561995 None:intergenic
CAAATTTGATCATCCAGTTG+TGG 0.569323 5.2:-72562114 MS.gene98555:CDS
GGATGTACAAACCTGACGCA+TGG 0.570494 5.2:+72563566 None:intergenic
TCCGGATAAGGCATTGATTG+AGG 0.571672 5.2:+72565029 None:intergenic
TAGTTGCTCCAGCTCAGCGC+AGG 0.575573 5.2:+72563179 None:intergenic
GCTGAGCTGGAGCAACTACA+TGG 0.582157 5.2:-72563174 MS.gene98555:intron
GGATGATCAAATTTGCATGT+TGG 0.583840 5.2:+72562122 None:intergenic
CCAGAAAGTGTCTCTCCCGC+CGG 0.585264 5.2:+72562653 None:intergenic
GATGTACAAACCTGACGCAT+GGG 0.586804 5.2:+72563567 None:intergenic
TCCTGTAAAGACTCGGACGA+AGG 0.587786 5.2:+72561885 None:intergenic
CTCTCCTTACTAGTCCAAGA+AGG 0.588326 5.2:-72562037 MS.gene98555:CDS
ACATTATCAATTAATCCACT+TGG 0.589067 5.2:-72562500 MS.gene98555:CDS
ACCTGATGAAGTAACAGTTG+TGG 0.598830 5.2:+72563316 None:intergenic
GTCCCTATTACATGAGAACT+GGG 0.603851 5.2:-72563430 MS.gene98555:CDS
TGGAGGAGCTTATCCAGTGG+CGG 0.605551 5.2:-72563351 MS.gene98555:CDS
ATGCCTTATCCGGATCGACC+TGG 0.607838 5.2:-72565020 MS.gene98555:CDS
TGATGAAGTAACAGTTGTGG+AGG 0.607944 5.2:+72563319 None:intergenic
GAATACTGATAGAGTAGGCG+AGG 0.609226 5.2:+72562067 None:intergenic
ATTCTCGGCATTGACCATGC+AGG 0.609928 5.2:+72563272 None:intergenic
GCATCGAATACTGATAGAGT+AGG 0.610445 5.2:+72562062 None:intergenic
GTGGCTATCTCTCAGAACTA+CGG 0.612160 5.2:-72562095 MS.gene98555:CDS
TACGACTACATGAATCCGGC+GGG 0.613456 5.2:-72562668 MS.gene98555:CDS
CACTGGATAAGCTCCTCCAA+AGG 0.616300 5.2:+72563355 None:intergenic
TTAGATCCAATAAAACCAGT+AGG 0.616664 5.2:+72562698 None:intergenic
AGTTTATTCCTGTAAAGACT+CGG 0.621015 5.2:+72561878 None:intergenic
GCGGGAGAGACACTTTCTGG+TGG 0.637718 5.2:-72562650 MS.gene98555:CDS
TAAAACCAGTAGGCATTGCA+GGG 0.641286 5.2:+72562708 None:intergenic
CTTTGGAGGAGCTTATCCAG+TGG 0.642465 5.2:-72563354 MS.gene98555:CDS
TTACAGGTGAAATGTTAGCA+GGG 0.642989 5.2:+72564928 None:intergenic
AGTTGGGCAACCTGATTGTG+AGG 0.647405 5.2:-72564694 MS.gene98555:intron
ACCTAAAGTATTGAAGACAA+CGG 0.650733 5.2:+72563593 None:intergenic
TATTTGAGGACTGGAATGTG+TGG 0.661824 5.2:-72564978 MS.gene98555:CDS
CTACGACTACATGAATCCGG+CGG 0.676232 5.2:-72562669 MS.gene98555:CDS
AATACTGATAGAGTAGGCGA+GGG 0.679258 5.2:+72562068 None:intergenic
TGTTAGCAGGGTGATTATAG+CGG 0.683660 5.2:+72564940 None:intergenic
GATGAAGTAACAGTTGTGGA+GGG 0.690790 5.2:+72563320 None:intergenic
CATCATCCCAAAGACAGGAG+AGG 0.694632 5.2:-72563624 MS.gene98555:CDS
GGTCTCATAGGAAGACCAAG+TGG 0.702644 5.2:+72562485 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGTATCTTAAAATATTA+GGG + chr5.2:72565378-72565397 None:intergenic 10.0%
!!! ATAGTTTATAGATTATTTTT+TGG + chr5.2:72565309-72565328 None:intergenic 10.0%
!!! TAAAAGTATCTTAAAATATT+AGG + chr5.2:72565379-72565398 None:intergenic 10.0%
!! ACAAAAATCTAATAAATGTT+TGG + chr5.2:72563459-72563478 None:intergenic 15.0%
!! CTCTTAATTAAGTTAATTAT+AGG + chr5.2:72563715-72563734 None:intergenic 15.0%
!! TACTAATATTAAATTCTGTT+TGG + chr5.2:72563902-72563921 None:intergenic 15.0%
!! TTAACTTAATTAAGAGTTTA+TGG - chr5.2:72563719-72563738 MS.gene98555:intron 15.0%
!!! GGTTTTATAATATGTAATTT+AGG - chr5.2:72562846-72562865 MS.gene98555:intron 15.0%
!!! TTATTAGATTTTTGTTTTGA+TGG - chr5.2:72563464-72563483 MS.gene98555:intron 15.0%
!!! TTTTTTTCACAATAAAAAGT+TGG + chr5.2:72565208-72565227 None:intergenic 15.0%
!! AAATCTAATAAATGTTTGGA+AGG + chr5.2:72563455-72563474 None:intergenic 20.0%
!! ATCTAGTAAATAAATTCTAC+AGG + chr5.2:72563506-72563525 None:intergenic 20.0%
!!! ATCTTGTTAAATTTTCTCAT+TGG - chr5.2:72562825-72562844 MS.gene98555:intron 20.0%
!!! ATGATATTTACTATTTTCCT+CGG - chr5.2:72563117-72563136 MS.gene98555:intron 20.0%
!!! CTATTTTATTTGTCGAAAAA+GGG - chr5.2:72564886-72564905 MS.gene98555:intron 20.0%
!!! TTATCTTTTTGTTATAGAAG+TGG + chr5.2:72563780-72563799 None:intergenic 20.0%
! AATAAGATGAAAAGATCTTC+AGG - chr5.2:72563846-72563865 MS.gene98555:intron 25.0%
! AATTAGCAAGTATTTCAAAC+AGG + chr5.2:72563229-72563248 None:intergenic 25.0%
! ACATTATCAATTAATCCACT+TGG - chr5.2:72565126-72565145 MS.gene98555:intron 25.0%
! AGAACACCAATAAATGAAAA+GGG - chr5.2:72563342-72563361 MS.gene98555:CDS 25.0%
! AGTATCTTAAAATATTAGGG+AGG + chr5.2:72565375-72565394 None:intergenic 25.0%
! ATAAGATGAAAAGATCTTCA+GGG - chr5.2:72563847-72563866 MS.gene98555:intron 25.0%
! CAATAAAAAGTTGGAACAAA+CGG + chr5.2:72565199-72565218 None:intergenic 25.0%
! CTCATACTTTATTAGATTTC+AGG - chr5.2:72562878-72562897 MS.gene98555:intron 25.0%
! CTTCTTCTTAAATTATGTCA+TGG + chr5.2:72563569-72563588 None:intergenic 25.0%
! TAGAACACCAATAAATGAAA+AGG - chr5.2:72563341-72563360 MS.gene98555:CDS 25.0%
! TCAGAAGAAAAATCATGAAA+AGG + chr5.2:72562744-72562763 None:intergenic 25.0%
! TGACATAATTTAAGAAGAAG+AGG - chr5.2:72563569-72563588 MS.gene98555:intron 25.0%
! TTAAGAGTGAATTCAAGTAT+AGG - chr5.2:72563057-72563076 MS.gene98555:intron 25.0%
! TTATTACTGCTTGAATTTGT+TGG - chr5.2:72562466-72562485 MS.gene98555:intron 25.0%
! TTGCTTTATGATGCAATAAA+GGG - chr5.2:72562342-72562361 MS.gene98555:intron 25.0%
! TTTGCTTTATGATGCAATAA+AGG - chr5.2:72562341-72562360 MS.gene98555:intron 25.0%
!! ACTTAATTTTTGTCCTTTTG+TGG - chr5.2:72563164-72563183 MS.gene98555:intron 25.0%
!! CATTTTCTTCTTAATGCTTA+GGG - chr5.2:72565172-72565191 MS.gene98555:intron 25.0%
!! GTAAAAAGTGAATTTGTTCA+AGG + chr5.2:72563095-72563114 None:intergenic 25.0%
!! TTGAAAACTTGTCTATTTTC+TGG + chr5.2:72561887-72561906 None:intergenic 25.0%
!! TTTCTTCCCTTTTCATTTAT+TGG + chr5.2:72563351-72563370 None:intergenic 25.0%
!!! AATCTACAATTGTTGCTTTT+AGG - chr5.2:72564161-72564180 MS.gene98555:intron 25.0%
!!! GCTATTTTATTTGTCGAAAA+AGG - chr5.2:72564885-72564904 MS.gene98555:intron 25.0%
!!! TGATGATGTGTTTCTATTTT+TGG - chr5.2:72562084-72562103 MS.gene98555:CDS 25.0%
!!! TTGTGAGGTATGTTTATTTT+TGG - chr5.2:72562947-72562966 MS.gene98555:intron 25.0%
AATAAACATACCTCACAATC+AGG + chr5.2:72562945-72562964 None:intergenic 30.0%
AATGTCATATTTATCTGGAC+AGG - chr5.2:72564374-72564393 MS.gene98555:intron 30.0%
ACAGTCCAATACAATTAAAC+TGG + chr5.2:72562429-72562448 None:intergenic 30.0%
AGATCTCTCTATGACAATAA+TGG - chr5.2:72563522-72563541 MS.gene98555:intron 30.0%
CACAAAGTTTACTCTTCTAA+TGG - chr5.2:72564109-72564128 MS.gene98555:intron 30.0%
CATTAGAAGAGTAAACTTTG+TGG + chr5.2:72564111-72564130 None:intergenic 30.0%
CCAGATAAATATGACATTCT+CGG + chr5.2:72564372-72564391 None:intergenic 30.0%
CTGATCCAGTTTAATTGTAT+TGG - chr5.2:72562421-72562440 MS.gene98555:intron 30.0%
GAAAAGGAAACAAAAGAAAG+AGG + chr5.2:72562728-72562747 None:intergenic 30.0%
GAGGAAATAATATCAAGTTC+AGG - chr5.2:72563588-72563607 MS.gene98555:CDS 30.0%
GGACAAAAATTAAGTGCAAA+AGG + chr5.2:72563159-72563178 None:intergenic 30.0%
TAAGAAGAAAATGCACTTAC+AGG + chr5.2:72565165-72565184 None:intergenic 30.0%
TGATTCTATGCAAGTAAACA+TGG + chr5.2:72562275-72562294 None:intergenic 30.0%
TGCTCTTATTACAGAATCTA+TGG - chr5.2:72565465-72565484 MS.gene98555:intron 30.0%
TGTAAATACTTTATGAGCAC+CGG - chr5.2:72565045-72565064 MS.gene98555:CDS 30.0%
TTAGATCCAATAAAACCAGT+AGG + chr5.2:72564931-72564950 None:intergenic 30.0%
TTAGCTAAACGAATACATGA+AGG - chr5.2:72564584-72564603 MS.gene98555:intron 30.0%
TTATTATACTTGATCGCACA+TGG - chr5.2:72562299-72562318 MS.gene98555:intron 30.0%
TTTGTGCTATCCTTTCTTTA+GGG + chr5.2:72565107-72565126 None:intergenic 30.0%
! AAATAAAGCACTTGGTTCAA+AGG + chr5.2:72564085-72564104 None:intergenic 30.0%
! AATAAAGCACTTGGTTCAAA+GGG + chr5.2:72564084-72564103 None:intergenic 30.0%
! ACTGTTTTCATAAGTTATCC+TGG - chr5.2:72563811-72563830 MS.gene98555:intron 30.0%
! AGCTTGTTTAGATGAATCTT+CGG + chr5.2:72565697-72565716 None:intergenic 30.0%
! ATATACTGATTAACCTGGTA+TGG - chr5.2:72564541-72564560 MS.gene98555:intron 30.0%
! ATTCTGTTTGGAATAGCTTA+TGG + chr5.2:72563890-72563909 None:intergenic 30.0%
! CTCATAAAGTATTTACAGTC+TGG + chr5.2:72565042-72565061 None:intergenic 30.0%
! GCATTTTCTTCTTAATGCTT+AGG - chr5.2:72565171-72565190 MS.gene98555:intron 30.0%
! TGATTTTCTGATTCCTATGT+TGG - chr5.2:72565420-72565439 MS.gene98555:intron 30.0%
! TGTGGAAAAAATAAAGCACT+TGG + chr5.2:72564093-72564112 None:intergenic 30.0%
! TGTTCTGATCATCATTGTTT+TGG - chr5.2:72562022-72562041 MS.gene98555:CDS 30.0%
! TTGCAGTATTTTCTTAAGAC+AGG - chr5.2:72563948-72563967 MS.gene98555:intron 30.0%
! TTTGGAATAGCTTATGGAAA+CGG + chr5.2:72563884-72563903 None:intergenic 30.0%
! TTTTATGAACATGTAGTCTG+TGG - chr5.2:72562795-72562814 MS.gene98555:intron 30.0%
!! ACCTAAAGTATTGAAGACAA+CGG + chr5.2:72564036-72564055 None:intergenic 30.0%
!! AGATTTCAGGTTACTCAATA+TGG - chr5.2:72562891-72562910 MS.gene98555:intron 30.0%
!! CATTGATTTCCAATCACATT+CGG - chr5.2:72564684-72564703 MS.gene98555:intron 30.0%
!! GTTCTGTTTTGGATGTTAAT+CGG + chr5.2:72564720-72564739 None:intergenic 30.0%
!! TTAACTTGTGTGAGTGAAAA+AGG - chr5.2:72562214-72562233 MS.gene98555:intron 30.0%
AAAAGAAAGAGGTCCATTAC+AGG + chr5.2:72562717-72562736 None:intergenic 35.0%
AAAAGGGAAGAAACTGATGT+AGG - chr5.2:72563358-72563377 MS.gene98555:CDS 35.0%
AAGACAGGAACATGTAAGTA+TGG - chr5.2:72563963-72563982 MS.gene98555:intron 35.0%
AATAAGTTATCCTGCCAATG+TGG - chr5.2:72563412-72563431 MS.gene98555:CDS 35.0%
AATATCATCATCCCAAAGAC+AGG - chr5.2:72563997-72564016 MS.gene98555:intron 35.0%
ACATAGCCAAACATCCTAAA+AGG + chr5.2:72564774-72564793 None:intergenic 35.0%
AGATCCATATTTGCATGTTC+CGG + chr5.2:72565067-72565086 None:intergenic 35.0%
AGGCGAAACCTATTATTGAA+GGG + chr5.2:72563209-72563228 None:intergenic 35.0%
ATCTATGGAGTATGCAAGTT+TGG - chr5.2:72565480-72565499 MS.gene98555:intron 35.0%
ATTACAGGTGAAATGTTAGC+AGG + chr5.2:72562702-72562721 None:intergenic 35.0%
CAAATTTGATCATCCAGTTG+TGG - chr5.2:72565512-72565531 MS.gene98555:intron 35.0%
CATTCAACCCCTTCAATAAT+AGG - chr5.2:72563198-72563217 MS.gene98555:CDS 35.0%
CCGAGAATGTCATATTTATC+TGG - chr5.2:72564369-72564388 MS.gene98555:intron 35.0%
CTATTATTGAAGGGGTTGAA+TGG + chr5.2:72563200-72563219 None:intergenic 35.0%
CTCAAATAATATACGCAGTC+AGG + chr5.2:72562636-72562655 None:intergenic 35.0%
CTGACTGCGTATATTATTTG+AGG - chr5.2:72562634-72562653 MS.gene98555:CDS 35.0%
GCGACATCTAGTAGTAAAAA+TGG + chr5.2:72564633-72564652 None:intergenic 35.0%
GGATGATCAAATTTGCATGT+TGG + chr5.2:72565507-72565526 None:intergenic 35.0%
GTTTGTGCTATCCTTTCTTT+AGG + chr5.2:72565108-72565127 None:intergenic 35.0%
TGCGTATATTATTTGAGGAC+TGG - chr5.2:72562639-72562658 MS.gene98555:CDS 35.0%
TGCTAACATTTCACCTGTAA+TGG - chr5.2:72562701-72562720 MS.gene98555:CDS 35.0%
TGGAAATAAGAGACCACAAA+AGG + chr5.2:72563180-72563199 None:intergenic 35.0%
TTACAGGTGAAATGTTAGCA+GGG + chr5.2:72562701-72562720 None:intergenic 35.0%
TTCGTATTGCAGAAGCTATT+CGG - chr5.2:72562535-72562554 MS.gene98555:CDS 35.0%
TTCTGCAATACGAATCACAA+AGG + chr5.2:72562529-72562548 None:intergenic 35.0%
TTGTCAGTTGATTGTTTCGA+TGG + chr5.2:72565645-72565664 None:intergenic 35.0%
TTTCCTAAACAAGACAAGAC+TGG + chr5.2:72564742-72564761 None:intergenic 35.0%
! CAAAAGACGATTTTCCACAT+TGG + chr5.2:72563429-72563448 None:intergenic 35.0%
! CACACATATACTGATTAACC+TGG - chr5.2:72564536-72564555 MS.gene98555:intron 35.0%
! GACAGTTTTTAAACCATACC+AGG + chr5.2:72564557-72564576 None:intergenic 35.0%
!! AGACAAGTTTTCAAGAATGC+TGG - chr5.2:72561893-72561912 MS.gene98555:CDS 35.0%
!! CCTAAAGTATTGAAGACAAC+GGG + chr5.2:72564035-72564054 None:intergenic 35.0%
!! GCTCTGAAATATTTAGCCTA+GGG - chr5.2:72563305-72563324 MS.gene98555:CDS 35.0%
!! GGAAATATTCCTAGCCTTTT+AGG - chr5.2:72564757-72564776 MS.gene98555:intron 35.0%
!! TGCTCTGAAATATTTAGCCT+AGG - chr5.2:72563304-72563323 MS.gene98555:CDS 35.0%
!! TTTCTTTCCCTCGTTTTGAA+CGG - chr5.2:72562991-72563010 MS.gene98555:intron 35.0%
!!! CTGATCATCATTGTTTTGGT+TGG - chr5.2:72562026-72562045 MS.gene98555:CDS 35.0%
AAGAAACTGATGTAGGTCGT+AGG - chr5.2:72563365-72563384 MS.gene98555:CDS 40.0%
AAGAACTTCCTGAGAGAGTT+GGG - chr5.2:72562916-72562935 MS.gene98555:intron 40.0%
AAGTTATCCTGGAGAGCTTA+TGG - chr5.2:72563822-72563841 MS.gene98555:intron 40.0%
AATACTGATAGAGTAGGCGA+GGG + chr5.2:72565561-72565580 None:intergenic 40.0%
AATGCACTTACAGGTCTCAT+AGG + chr5.2:72565156-72565175 None:intergenic 40.0%
ACCAACAAGTTTCATTGCAC+TGG + chr5.2:72563683-72563702 None:intergenic 40.0%
ACCAAGACTATGCTCATACA+AGG - chr5.2:72563277-72563296 MS.gene98555:CDS 40.0%
ACCTGATGAAGTAACAGTTG+TGG + chr5.2:72564313-72564332 None:intergenic 40.0%
AGACCCAGTTCTCATGTAAT+AGG + chr5.2:72564202-72564221 None:intergenic 40.0%
ATTGTATTGGACTGTGAGTG+TGG - chr5.2:72562434-72562453 MS.gene98555:intron 40.0%
CAAGTTTCATCATCCACAAC+AGG - chr5.2:72564242-72564261 MS.gene98555:intron 40.0%
CAGGCGAAACCTATTATTGA+AGG + chr5.2:72563210-72563229 None:intergenic 40.0%
CATGAAATCGAATGTGGATG+TGG - chr5.2:72563019-72563038 MS.gene98555:intron 40.0%
CATGAGCACAAAATCTCTGT+AGG - chr5.2:72563253-72563272 MS.gene98555:CDS 40.0%
CCAAGACTATGCTCATACAA+GGG - chr5.2:72563278-72563297 MS.gene98555:CDS 40.0%
CCATCTGGTGATAACATTGA+AGG - chr5.2:72561923-72561942 MS.gene98555:CDS 40.0%
CCCGTTGTCTTCAATACTTT+AGG - chr5.2:72564032-72564051 MS.gene98555:intron 40.0%
CCTTCAATGTTATCACCAGA+TGG + chr5.2:72561926-72561945 None:intergenic 40.0%
CCTTGTGAAGAAGGCAAAAA+AGG + chr5.2:72564420-72564439 None:intergenic 40.0%
CTAACAATGAACATGTCCCT+AGG + chr5.2:72563324-72563343 None:intergenic 40.0%
CTTATTTCCATAAGCTCTCC+AGG + chr5.2:72563832-72563851 None:intergenic 40.0%
GACCCAGTTCTCATGTAATA+GGG + chr5.2:72564201-72564220 None:intergenic 40.0%
GATGAAGTAACAGTTGTGGA+GGG + chr5.2:72564309-72564328 None:intergenic 40.0%
GCATCGAATACTGATAGAGT+AGG + chr5.2:72565567-72565586 None:intergenic 40.0%
GGCGAAACCTATTATTGAAG+GGG + chr5.2:72563208-72563227 None:intergenic 40.0%
GTCCCTATTACATGAGAACT+GGG - chr5.2:72564196-72564215 MS.gene98555:intron 40.0%
GTGCTTCATGAAATCGAATG+TGG - chr5.2:72563013-72563032 MS.gene98555:intron 40.0%
TACATGCATTCAGTGGTTAC+TGG - chr5.2:72564817-72564836 MS.gene98555:intron 40.0%
TAGCTTATGGAAACGGCTTA+TGG + chr5.2:72563877-72563896 None:intergenic 40.0%
TATTTACAGTCTGGTTGCTC+AGG + chr5.2:72565033-72565052 None:intergenic 40.0%
TATTTGAGGACTGGAATGTG+TGG - chr5.2:72562648-72562667 MS.gene98555:CDS 40.0%
TCCAGTGCAATGAAACTTGT+TGG - chr5.2:72563679-72563698 MS.gene98555:intron 40.0%
TCGTAACTACATGCATTCAG+TGG - chr5.2:72564810-72564829 MS.gene98555:intron 40.0%
TGATGAAGTAACAGTTGTGG+AGG + chr5.2:72564310-72564329 None:intergenic 40.0%
TGTCCCTATTACATGAGAAC+TGG - chr5.2:72564195-72564214 MS.gene98555:intron 40.0%
TGTCTACGACTACATGAATC+CGG - chr5.2:72564954-72564973 MS.gene98555:CDS 40.0%
TGTGAAGAAGGCAAAAAAGG+AGG + chr5.2:72564417-72564436 None:intergenic 40.0%
TGTTAGCAGGGTGATTATAG+CGG + chr5.2:72562689-72562708 None:intergenic 40.0%
TTGTTTCGATGGAGATGTCT+CGG + chr5.2:72565634-72565653 None:intergenic 40.0%
! AGGAGGCACATAAGATTGAA+TGG + chr5.2:72564400-72564419 None:intergenic 40.0%
! ATAAAACCAGTAGGCATTGC+AGG + chr5.2:72564922-72564941 None:intergenic 40.0%
! TAAAACCAGTAGGCATTGCA+GGG + chr5.2:72564921-72564940 None:intergenic 40.0%
! TCATCAGGTTTTCCATATGC+TGG - chr5.2:72564324-72564343 MS.gene98555:intron 40.0%
! TCCACAACTGTTACTTCATC+AGG - chr5.2:72564309-72564328 MS.gene98555:intron 40.0%
!! AAAGCCTTCTTGGACTAGTA+AGG + chr5.2:72565596-72565615 None:intergenic 40.0%
!! AATGCTGGTTCTAATCCATC+TGG - chr5.2:72561908-72561927 MS.gene98555:CDS 40.0%
!! AGTGCAATGAAACTTGTTGG+TGG - chr5.2:72563682-72563701 MS.gene98555:intron 40.0%
!! GAACCAGTCTTGTCTTGTTT+AGG - chr5.2:72564736-72564755 MS.gene98555:intron 40.0%
!!! AGACAAGACTGGTTCTGTTT+TGG + chr5.2:72564731-72564750 None:intergenic 40.0%
!!! CCTTTTTTGCCTTCTTCACA+AGG - chr5.2:72564417-72564436 MS.gene98555:intron 40.0%
!!! GCAATGCCTACTGGTTTTAT+TGG - chr5.2:72564922-72564941 MS.gene98555:intron 40.0%
!!! TCCTAGCCTTTTAGGATGTT+TGG - chr5.2:72564765-72564784 MS.gene98555:intron 40.0%
AAGTAACAGTTGTGGAGGGA+GGG + chr5.2:72564305-72564324 None:intergenic 45.0%
AGAACTGGGTCTTGCAAGTT+TGG - chr5.2:72564210-72564229 MS.gene98555:intron 45.0%
AGGACTGGAATGTGTGGTTA+CGG - chr5.2:72562654-72562673 MS.gene98555:CDS 45.0%
AGTTCCACCACCCTAAAGAA+AGG - chr5.2:72565094-72565113 MS.gene98555:intron 45.0%
ATTAACCCTGCAATGCCTAC+TGG - chr5.2:72564913-72564932 MS.gene98555:intron 45.0%
CCCTTGTATGAGCATAGTCT+TGG + chr5.2:72563281-72563300 None:intergenic 45.0%
CTCTCCTTACTAGTCCAAGA+AGG - chr5.2:72565589-72565608 MS.gene98555:intron 45.0%
CTGATGTAGGTCGTAGGATA+CGG - chr5.2:72563371-72563390 MS.gene98555:CDS 45.0%
GAAACTAAGACTTCTGTCCG+AGG + chr5.2:72563137-72563156 None:intergenic 45.0%
GAAGAACTTCCTGAGAGAGT+TGG - chr5.2:72562915-72562934 MS.gene98555:intron 45.0%
GAATACTGATAGAGTAGGCG+AGG + chr5.2:72565562-72565581 None:intergenic 45.0%
GATGTACAAACCTGACGCAT+GGG + chr5.2:72564062-72564081 None:intergenic 45.0%
GCCAAACATCCTAAAAGGCT+AGG + chr5.2:72564769-72564788 None:intergenic 45.0%
GCCTCAATCAATGCCTTATC+CGG - chr5.2:72562596-72562615 MS.gene98555:CDS 45.0%
GGCATAATGCCTTGTGAAGA+AGG + chr5.2:72564429-72564448 None:intergenic 45.0%
GTGGCTATCTCTCAGAACTA+CGG - chr5.2:72565531-72565550 MS.gene98555:intron 45.0%
TGGACAGTTGAAAGCCTTCT+TGG + chr5.2:72565606-72565625 None:intergenic 45.0%
! AGACGATTTTCCACATTGGC+AGG + chr5.2:72563425-72563444 None:intergenic 45.0%
! AGCACCGGAACATGCAAATA+TGG - chr5.2:72565060-72565079 MS.gene98555:CDS 45.0%
! CAGGTTTTCCATATGCTGGT+GGG - chr5.2:72564328-72564347 MS.gene98555:intron 45.0%
! GTGCTATCCTTTCTTTAGGG+TGG + chr5.2:72565104-72565123 None:intergenic 45.0%
! TCAGGTTTTCCATATGCTGG+TGG - chr5.2:72564327-72564346 MS.gene98555:intron 45.0%
! TCCTATGTTGGTTGTCTGCA+GGG - chr5.2:72565432-72565451 MS.gene98555:intron 45.0%
! TTCCTATGTTGGTTGTCTGC+AGG - chr5.2:72565431-72565450 MS.gene98555:intron 45.0%
! TTCTGAGAGATAGCCACAAC+TGG + chr5.2:72565528-72565547 None:intergenic 45.0%
!! ATGAAGCACCGTTCAAAACG+AGG + chr5.2:72563002-72563021 None:intergenic 45.0%
!! ATTTGAGCGCCGAATGTGAT+TGG + chr5.2:72564696-72564715 None:intergenic 45.0%
!! CTATCCTTTCTTTAGGGTGG+TGG + chr5.2:72565101-72565120 None:intergenic 45.0%
!! TCCGGATAAGGCATTGATTG+AGG + chr5.2:72562600-72562619 None:intergenic 45.0%
!! TGAAGCACCGTTCAAAACGA+GGG + chr5.2:72563001-72563020 None:intergenic 45.0%
ACCTTCGTCCGAGTCTTTAC+AGG - chr5.2:72565740-72565759 MS.gene98555:CDS 50.0%
AGGTCGTAGGATACGGAATG+AGG - chr5.2:72563378-72563397 MS.gene98555:CDS 50.0%
AGTAACAGTTGTGGAGGGAG+GGG + chr5.2:72564304-72564323 None:intergenic 50.0%
AGTTGGGCAACCTGATTGTG+AGG - chr5.2:72562932-72562951 MS.gene98555:intron 50.0%
ATGGAGATGTCTCGGTTGGT+TGG + chr5.2:72565626-72565645 None:intergenic 50.0%
CACTGGATAAGCTCCTCCAA+AGG + chr5.2:72564274-72564293 None:intergenic 50.0%
CATCATCCCAAAGACAGGAG+AGG - chr5.2:72564002-72564021 MS.gene98555:intron 50.0%
CTACGACTACATGAATCCGG+CGG - chr5.2:72564957-72564976 MS.gene98555:CDS 50.0%
GAAGTAACAGTTGTGGAGGG+AGG + chr5.2:72564306-72564325 None:intergenic 50.0%
GGACTGGAATGTGTGGTTAC+GGG - chr5.2:72562655-72562674 MS.gene98555:CDS 50.0%
GGATGTACAAACCTGACGCA+TGG + chr5.2:72564063-72564082 None:intergenic 50.0%
GGTCTCATAGGAAGACCAAG+TGG + chr5.2:72565144-72565163 None:intergenic 50.0%
TACGACTACATGAATCCGGC+GGG - chr5.2:72564958-72564977 MS.gene98555:CDS 50.0%
TATACGCAGTCAGGTTCACC+AGG + chr5.2:72562627-72562646 None:intergenic 50.0%
TCCCTGCAGACAACCAACAT+AGG + chr5.2:72565436-72565455 None:intergenic 50.0%
TCCTGTAAAGACTCGGACGA+AGG + chr5.2:72565744-72565763 None:intergenic 50.0%
TCTGGTTGCTCAGGTCTATC+TGG + chr5.2:72565024-72565043 None:intergenic 50.0%
TTCGATGGAGATGTCTCGGT+TGG + chr5.2:72565630-72565649 None:intergenic 50.0%
TTTAGGTCTTCCCATGCGTC+AGG - chr5.2:72564049-72564068 MS.gene98555:intron 50.0%
! AGAGACACTTTCTGGTGGAC+AGG - chr5.2:72564981-72565000 MS.gene98555:CDS 50.0%
! CTTTGGAGGAGCTTATCCAG+TGG - chr5.2:72564272-72564291 MS.gene98555:intron 50.0%
!! ATTCTCGGCATTGACCATGC+AGG + chr5.2:72564357-72564376 None:intergenic 50.0%
ATGCCTTATCCGGATCGACC+TGG - chr5.2:72562606-72562625 MS.gene98555:CDS 55.0%
CAACAGGCAGCTTCCTTTGG+AGG - chr5.2:72564258-72564277 MS.gene98555:intron 55.0%
CCAAAGGAAGCTGCCTGTTG+TGG + chr5.2:72564258-72564277 None:intergenic 55.0%
CCACAACAGGCAGCTTCCTT+TGG - chr5.2:72564255-72564274 MS.gene98555:intron 55.0%
GCAGCACCTCTCCTGTCTTT+GGG + chr5.2:72564011-72564030 None:intergenic 55.0%
GCAGGAAACCCACCAGCATA+TGG + chr5.2:72564339-72564358 None:intergenic 55.0%
GCTGAGCTGGAGCAACTACA+TGG - chr5.2:72564452-72564471 MS.gene98555:intron 55.0%
TCACCAGGTCGATCCGGATA+AGG + chr5.2:72562612-72562631 None:intergenic 55.0%
TCAGGTTCACCAGGTCGATC+CGG + chr5.2:72562618-72562637 None:intergenic 55.0%
TGCAGCACCTCTCCTGTCTT+TGG + chr5.2:72564012-72564031 None:intergenic 55.0%
TGGAGGAGCTTATCCAGTGG+CGG - chr5.2:72564275-72564294 MS.gene98555:intron 55.0%
! TCAGGTTGCCCAACTCTCTC+AGG + chr5.2:72562927-72562946 None:intergenic 55.0%
!! ATGCTGGTGGGTTTCCTGCA+TGG - chr5.2:72564340-72564359 MS.gene98555:intron 55.0%
GCATTATGCCTGCGCTGAGC+TGG - chr5.2:72564439-72564458 MS.gene98555:intron 60.0%
GCGGGAGAGACACTTTCTGG+TGG - chr5.2:72564976-72564995 MS.gene98555:CDS 60.0%
TAGTTGCTCCAGCTCAGCGC+AGG + chr5.2:72564450-72564469 None:intergenic 60.0%
!! CCAGAAAGTGTCTCTCCCGC+CGG + chr5.2:72564976-72564995 None:intergenic 60.0%
CCGGCGGGAGAGACACTTTC+TGG - chr5.2:72564973-72564992 MS.gene98555:CDS 65.0%
! GAGGGAGGGGACGCCGCCAC+TGG + chr5.2:72564291-72564310 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 72561881 72565767 72561881 ID=MS.gene98555
chr5.2 mRNA 72561881 72565767 72561881 ID=MS.gene98555.t1;Parent=MS.gene98555
chr5.2 exon 72565704 72565767 72565704 ID=MS.gene98555.t1.exon1;Parent=MS.gene98555.t1
chr5.2 CDS 72565704 72565767 72565704 ID=cds.MS.gene98555.t1;Parent=MS.gene98555.t1
chr5.2 exon 72564932 72565101 72564932 ID=MS.gene98555.t1.exon2;Parent=MS.gene98555.t1
chr5.2 CDS 72564932 72565101 72564932 ID=cds.MS.gene98555.t1;Parent=MS.gene98555.t1
chr5.2 exon 72564695 72564748 72564695 ID=MS.gene98555.t1.exon3;Parent=MS.gene98555.t1
chr5.2 CDS 72564695 72564748 72564695 ID=cds.MS.gene98555.t1;Parent=MS.gene98555.t1
chr5.2 exon 72563578 72563694 72563578 ID=MS.gene98555.t1.exon4;Parent=MS.gene98555.t1
chr5.2 CDS 72563578 72563694 72563578 ID=cds.MS.gene98555.t1;Parent=MS.gene98555.t1
chr5.2 exon 72563175 72563465 72563175 ID=MS.gene98555.t1.exon5;Parent=MS.gene98555.t1
chr5.2 CDS 72563175 72563465 72563175 ID=cds.MS.gene98555.t1;Parent=MS.gene98555.t1
chr5.2 exon 72562484 72562741 72562484 ID=MS.gene98555.t1.exon6;Parent=MS.gene98555.t1
chr5.2 CDS 72562484 72562741 72562484 ID=cds.MS.gene98555.t1;Parent=MS.gene98555.t1
chr5.2 exon 72561881 72562195 72561881 ID=MS.gene98555.t1.exon7;Parent=MS.gene98555.t1
chr5.2 CDS 72561881 72562195 72561881 ID=cds.MS.gene98555.t1;Parent=MS.gene98555.t1
Gene Sequence

>MS.gene98555

ATGCCAGAAAATAGACAAGTTTTCAAGAATGCTGGTTCTAATCCATCTGGTGATAACATTGAAGGTAATTCAATGAATGATTGATTTTTCTTTAAATTTTTCATGTTTTGTGTTATGATTTGTTGTTTATGTTGTTTTTCTTGTTCTGATCATCATTGTTTTGGTTGGAAATATTTTGTTTTCATTGATGATGATTATGATGATGATGATGTGTTTCTATTTTTGGAAGAATGATTTTGATTTGAATGATTTCTATTTTTGTTTTGTTTATGATTGATTCATGCAATGTTGTTGTATTGTGTGAGATTTGATGATTTTTTTTGAAACTATGAGTTAACTTGTGTGAGTGAAAAAGGTTGCATCAATAGAAAATTATTATTATATTATGATTCCATGTTTACTTGCATAGAATCAAGTGTTATTATACTTGATCGCACATGGTTTTACAAAATTTGTGTACTTTGCTTTATGATGCAATAAAGGGTCGTAATCGTAATCTGCGTATTTTGATTTCAAATTCTTTATGATAGCTTTGAATTTCTGATCCAGTTTAATTGTATTGGACTGTGAGTGTGGTAATTTGTGTTATTACTGCTTGAATTTGTTGGAATGTTTGTTGAGAGATTGTGCAAGATTTGTCTGATTCCTTTGTGATTCGTATTGCAGAAGCTATTCGGCGTTTGAAAATCAATAGTACTCGAGACAGAGATGCTGTGCCTCAATCAATGCCTTATCCGGATCGACCTGGTGAACCTGACTGCGTATATTATTTGAGGACTGGAATGTGTGGTTACGGGAGTAACTGCCGCTATAATCACCCTGCTAACATTTCACCTGTAATGGACCTCTTTCTTTTGTTTCCTTTTCATGATTTTTCTTCTGAATAGATATGAAACAGTTTTCTAAGTCAAATATTTTATGAACATGTAGTCTGTGGAATTGTAATCTTGTTAAATTTTCTCATTGGTTTTATAATATGTAATTTAGGTAAAAGTTTCTCATACTTTATTAGATTTCAGGTTACTCAATATGGTGAAGAACTTCCTGAGAGAGTTGGGCAACCTGATTGTGAGGTATGTTTATTTTTGGTTGCTAAAAATTGTTATCATTTTTCTTTCCCTCGTTTTGAACGGTGCTTCATGAAATCGAATGTGGATGTGGTTTATGCAAGAACTTTTAAGAGTGAATTCAAGTATAGGCTTTTTTTTTTTCCTTGAACAAATTCACTTTTTACATATGATATTTACTATTTTCCTCGGACAGAAGTCTTAGTTTCCTTTTGCACTTAATTTTTGTCCTTTTGTGGTCTCTTATTTCCATTCAACCCCTTCAATAATAGGTTTCGCCTGTTTGAAATACTTGCTAATTCTTGCATGAGCACAAAATCTCTGTAGGCACCAAGACTATGCTCATACAAGGGAATTGCTCTGAAATATTTAGCCTAGGGACATGTTCATTGTTAGAACACCAATAAATGAAAAGGGAAGAAACTGATGTAGGTCGTAGGATACGGAATGAGGACAAAAAAACGAATAAGTTATCCTGCCAATGTGGAAAATCGTCTTTTGCTTCCTTCCAAACATTTATTAGATTTTTGTTTTGATGGACGTTATAGTGTTTGTCCTGTAGAATTTATTTACTAGATCTCTCTATGACAATAATGGCAAAGTTTCATTAGATGCTAGCCATGACATAATTTAAGAAGAAGAGGAAATAATATCAAGTTCAGGAAATGAATAAAATCTGTAGATTTTGTGCATTGTTTGTTAATGAGTAATATTAGATATTTCATCGTTATTCCAGTGCAATGAAACTTGTTGGTGGCATATTACCTATAATTAACTTAATTAAGAGTTTATGGCTTAAGCACTAACGATATAAGTACTTATGAATAAGCCACTTCTATAACAAAAAGATAAAACAAAGTCAAACTGTTTTCATAAGTTATCCTGGAGAGCTTATGGAAATAAGATGAAAAGATCTTCAGGGCATGCCATAAGCCGTTTCCATAAGCTATTCCAAACAGAATTTAATATTAGTAACTTGTGATCTTGTTTGAAATATGTGTTGCAGTATTTTCTTAAGACAGGAACATGTAAGTATGGATCGACATGTAAATATCATCATCCCAAAGACAGGAGAGGTGCTGCACCCGTTGTCTTCAATACTTTAGGTCTTCCCATGCGTCAGGTTTGTACATCCCTTTGAACCAAGTGCTTTATTTTTTCCACAAAGTTTACTCTTCTAATGGAAGATGTTGAAGCAGTTGCGTTTTTCAATAATCTACAATTGTTGCTTTTAGGAAGAAAAATCATGTCCCTATTACATGAGAACTGGGTCTTGCAAGTTTGGAGTTGCATGCAAGTTTCATCATCCACAACAGGCAGCTTCCTTTGGAGGAGCTTATCCAGTGGCGGCGTCCCCTCCCTCCACAACTGTTACTTCATCAGGTTTTCCATATGCTGGTGGGTTTCCTGCATGGTCAATGCCGAGAATGTCATATTTATCTGGACAGGCCATTCAATCTTATGTGCCTCCTTTTTTGCCTTCTTCACAAGGCATTATGCCTGCGCTGAGCTGGAGCAACTACATGGTTAGTTAAAAACTGTTGAATGTCGTGTTTATATTTACAGTTACTGTGTTATTGAATGATCACACACATATACTGATTAACCTGGTATGGTTTAAAAACTGTCAAATATATTAGCTAAACGAATACATGAAGGTTAGAAATTAGAAAATCTTGTTACCATTTTTACTACTAGATGTCGCACACATTGCATGATTGACAATACTTTTGTTTCATTGATTTCCAATCACATTCGGCGCTCAAATACCGATTAACATCCAAAACAGAACCAGTCTTGTCTTGTTTAGGAAATATTCCTAGCCTTTTAGGATGTTTGGCTATGTTTGATTATGTTAGATTTCGTAACTACATGCATTCAGTGGTTACTGGTTACTTACTTTTTGCTGATTCAACTAAGATGTTCTGTTTTTGACTGCTATTTTATTTGTCGAAAAAGGGAAGTATTAACCCTGCAATGCCTACTGGTTTTATTGGATCTAATCTTGTCTACGACTACATGAATCCGGCGGGAGAGACACTTTCTGGTGGACAGGTAATGAATTCATCTCTTCCAGATAGACCTGAGCAACCAGACTGTAAATACTTTATGAGCACCGGAACATGCAAATATGGATCTGATTGCAAGTTCCACCACCCTAAAGAAAGGATAGCACAAACATTATCAATTAATCCACTTGGTCTTCCTATGAGACCTGTAAGTGCATTTTCTTCTTAATGCTTAGGGTCCGTTTGTTCCAACTTTTTATTGTGAAAAAAAATAATTTTTTTAAATAAACAATTTTAGAAGTTTTCATGCATTTGTTATTTAAACAAAATGAGAATCTGAAAAAAATCTCCAAAAAATAATCTATAAACTATTGAATATCACTTTTTGTTACTTTGAAATATTTGTAAATATTATCCTCCCTAATATTTTAAGATACTTTTATAATAAGTTATCAAATTAATTTGATTTTCTGATTCCTATGTTGGTTGTCTGCAGGGAAATGCTATATGCTCTTATTACAGAATCTATGGAGTATGCAAGTTTGGTCCAACATGCAAATTTGATCATCCAGTTGTGGCTATCTCTCAGAACTACGGCTTGCCCTCGCCTACTCTATCAGTATTCGATGCATCTCTCCTTACTAGTCCAAGAAGGCTTTCAACTGTCCAACCAACCGAGACATCTCCATCGAAACAATCAACTGACAAGCTTCAACAATCTGATACAAAAGCTGCTACCGAAGATTCATCTAAACAAGCTGACAGTACATCAACTTCTCGCACACCTTCGTCCGAGTCTTTACAGGAATAA
Protein sequence

>MS.gene98555.t1

MPENRQVFKNAGSNPSGDNIEEAIRRLKINSTRDRDAVPQSMPYPDRPGEPDCVYYLRTGMCGYGSNCRYNHPANISPVTQYGEELPERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPVVFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQQAASFGGAYPVAASPPSTTVTSSGFPYAGGFPAWSMPRMSYLSGQAIQSYVPPFLPSSQGIMPALSWSNYMGSINPAMPTGFIGSNLVYDYMNPAGETLSGGQVMNSSLPDRPEQPDCKYFMSTGTCKYGSDCKFHHPKERIAQTLSINPLGLPMRPGNAICSYYRIYGVCKFGPTCKFDHPVVAISQNYGLPSPTLSVFDASLLTSPRRLSTVQPTETSPSKQSTDKLQQSDTKAATEDSSKQADSTSTSRTPSSESLQE