AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81643

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81643.t1 MTR_5g085200 99.052 422 4 0 1 422 1 422 0.0 867
MS.gene81643.t1 MTR_7g079840 43.440 343 154 10 40 350 13 347 7.82e-90 278
MS.gene81643.t1 MTR_7g079840 43.440 343 154 10 40 350 23 357 1.07e-89 278
MS.gene81643.t1 MTR_3g075190 38.728 346 169 12 44 368 171 494 2.41e-66 220
MS.gene81643.t1 MTR_4g104260 37.695 321 169 11 44 347 231 537 4.33e-66 221
MS.gene81643.t1 MTR_1g088875 35.780 327 173 8 19 318 27 343 8.76e-63 206
MS.gene81643.t1 MTR_1g088875 48.421 95 42 3 271 362 92 182 2.61e-18 85.9
MS.gene81643.t1 MTR_1g088875 35.780 327 173 8 19 318 27 343 8.89e-63 206
MS.gene81643.t1 MTR_1g088875 48.421 95 42 3 271 362 92 182 2.36e-18 86.3
MS.gene81643.t1 MTR_1g088875 35.780 327 173 8 19 318 27 343 1.04e-62 206
MS.gene81643.t1 MTR_1g088875 48.421 95 42 3 271 362 92 182 2.77e-18 85.9
MS.gene81643.t1 MTR_2g019740 37.209 344 173 11 44 348 44 383 3.73e-60 203
MS.gene81643.t1 MTR_2g019740 44.578 83 45 1 84 165 42 124 3.90e-18 86.7
MS.gene81643.t1 MTR_2g019740 34.615 130 36 2 269 349 43 172 1.22e-14 75.9
MS.gene81643.t1 MTR_8g446930 33.524 349 134 9 38 343 31 324 1.12e-55 188
MS.gene81643.t1 MTR_8g446930 33.428 353 137 9 34 343 177 474 8.28e-55 189
MS.gene81643.t1 MTR_4g119280 36.527 334 161 12 44 343 43 359 1.77e-47 167
MS.gene81643.t1 MTR_4g119280 34.688 320 177 12 26 319 66 379 3.21e-35 134
MS.gene81643.t1 MTR_4g119280 38.312 154 88 5 241 390 58 208 8.21e-21 94.0
MS.gene81643.t1 MTR_4g119280 48.148 81 42 0 84 164 41 121 6.84e-19 88.2
MS.gene81643.t1 MTR_4g119280 45.570 79 42 1 269 346 42 120 4.87e-15 76.6
MS.gene81643.t1 MTR_4g119280 36.686 338 155 13 44 343 43 359 5.88e-47 169
MS.gene81643.t1 MTR_4g119280 35.942 345 189 12 26 344 66 404 1.49e-45 165
MS.gene81643.t1 MTR_4g119280 48.148 81 42 0 84 164 41 121 9.98e-19 88.6
MS.gene81643.t1 MTR_4g119280 45.570 79 42 1 269 346 42 120 5.85e-15 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81643.t1 AT1G04990 44.893 421 191 11 1 403 5 402 4.42e-115 342
MS.gene81643.t1 AT1G04990 44.893 421 191 11 1 403 5 402 4.42e-115 342
MS.gene81643.t1 AT1G04990 44.893 421 191 11 1 403 5 402 4.42e-115 342
MS.gene81643.t1 AT2G32930 45.089 448 186 15 1 412 1 424 5.66e-110 331
MS.gene81643.t1 AT1G04990 42.721 419 183 11 1 403 5 382 2.59e-106 319
MS.gene81643.t1 AT2G32930 44.196 448 186 16 1 412 1 420 1.87e-104 317
MS.gene81643.t1 AT2G32930 45.131 421 172 14 27 412 1 397 1.33e-103 314
MS.gene81643.t1 AT3G02830 39.066 407 186 17 21 392 18 397 3.54e-84 263
MS.gene81643.t1 AT3G02830 40.051 392 177 16 36 392 9 377 9.43e-84 261
MS.gene81643.t1 AT2G47850 38.701 354 183 9 19 350 27 368 2.03e-80 256
MS.gene81643.t1 AT2G47850 38.701 354 183 9 19 350 27 368 2.03e-80 256
MS.gene81643.t1 AT5G18550 42.683 328 154 13 44 342 16 338 2.97e-80 254
MS.gene81643.t1 AT5G18550 39.175 97 48 3 269 354 15 111 8.83e-16 79.3
MS.gene81643.t1 AT5G18550 42.683 328 154 13 44 342 48 370 3.19e-80 255
MS.gene81643.t1 AT5G18550 39.175 97 48 3 269 354 47 143 6.57e-16 79.7
MS.gene81643.t1 AT5G18550 42.683 328 154 13 44 342 48 370 4.53e-80 254
MS.gene81643.t1 AT5G18550 39.175 97 48 3 269 354 47 143 7.40e-16 79.7
MS.gene81643.t1 AT5G16540 39.316 351 171 11 44 383 39 358 5.58e-78 246
MS.gene81643.t1 AT5G16540 43.038 79 44 1 266 343 35 113 1.84e-14 75.1
MS.gene81643.t1 AT5G16540 36.471 85 46 2 37 115 233 315 1.08e-13 72.4
MS.gene81643.t1 AT5G16540 39.316 351 171 11 44 383 18 337 6.45e-78 246
MS.gene81643.t1 AT5G16540 43.038 79 44 1 266 343 14 92 1.71e-14 74.7
MS.gene81643.t1 AT5G16540 36.471 85 46 2 37 115 212 294 1.19e-13 72.4
MS.gene81643.t1 AT3G06410 38.843 363 169 12 20 342 29 378 2.65e-77 247
MS.gene81643.t1 AT3G06410 44.156 77 41 1 269 343 50 126 5.48e-16 80.1
MS.gene81643.t1 AT1G04990 41.846 325 153 9 96 403 16 321 1.76e-75 238
MS.gene81643.t1 AT1G04990 40.909 88 51 1 74 160 165 252 1.55e-13 71.6
MS.gene81643.t1 AT5G18550 41.284 327 147 13 44 342 48 357 5.21e-73 236
MS.gene81643.t1 AT5G18550 39.175 97 48 3 269 354 47 143 6.22e-16 79.7
MS.gene81643.t1 AT5G16540 38.040 347 174 10 44 383 39 351 5.25e-73 233
MS.gene81643.t1 AT5G16540 43.038 79 44 1 266 343 35 113 1.58e-14 75.1
MS.gene81643.t1 AT5G16540 35.366 82 44 2 37 115 233 308 8.60e-12 66.6
MS.gene81643.t1 AT3G48440 39.450 327 158 14 44 344 107 419 2.20e-67 221
MS.gene81643.t1 AT3G48440 52.500 80 37 1 84 162 341 420 2.65e-20 93.2
MS.gene81643.t1 AT5G63260 36.494 348 189 11 19 344 70 407 1.10e-66 219
MS.gene81643.t1 AT1G04990 38.838 327 148 9 92 403 12 301 1.44e-66 214
MS.gene81643.t1 AT5G63260 35.989 364 185 12 19 344 70 423 3.62e-65 215
MS.gene81643.t1 AT2G47850 34.278 353 174 11 19 350 27 342 5.41e-61 204
MS.gene81643.t1 AT5G16540 39.576 283 132 10 44 318 18 269 4.10e-59 194
MS.gene81643.t1 AT5G16540 47.500 80 40 1 266 343 59 138 8.45e-20 89.4
MS.gene81643.t1 AT5G16540 43.038 79 44 1 266 343 14 92 1.04e-14 74.3
MS.gene81643.t1 AT3G12680 36.232 345 159 12 44 343 171 499 3.77e-56 194
MS.gene81643.t1 AT3G12680 43.023 86 38 2 41 115 414 499 3.82e-16 80.9
MS.gene81643.t1 AT2G47850 35.918 245 137 6 124 350 4 246 1.71e-42 153
MS.gene81643.t1 AT2G47850 49.398 83 41 1 79 160 157 239 7.14e-22 96.7
MS.gene81643.t1 AT2G47850 41.975 81 33 2 44 115 164 239 2.29e-15 77.4
MS.gene81643.t1 AT1G48195 46.753 77 39 1 268 342 4 80 3.49e-20 84.7
MS.gene81643.t1 AT1G48195 46.753 77 40 1 84 159 4 80 2.07e-17 77.0
MS.gene81643.t1 AT1G48195 48.000 75 35 1 44 114 6 80 1.34e-16 74.7
MS.gene81643.t1 AT1G29600 44.578 83 36 4 41 122 125 198 6.10e-15 75.9
MS.gene81643.t1 AT1G29600 44.578 83 36 4 41 122 119 192 7.66e-15 75.5

Find 113 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGTGCTATCCTTTCTTT+AGG 0.127413 5.1:+67062753 None:intergenic
TGCAGCACCTCTCCTGTCTT+TGG 0.215706 5.1:+67063849 None:intergenic
CCGGCGGGAGAGACACTTTC+TGG 0.243331 5.1:-67062885 MS.gene81643:CDS
AGACCCAGTTCTCATGTAAT+AGG 0.260132 5.1:+67063659 None:intergenic
AGAACTGGGTCTTGCAAGTT+TGG 0.276971 5.1:-67063648 MS.gene81643:CDS
AGATTTCAGGTTACTCAATA+TGG 0.278926 5.1:-67065004 MS.gene81643:intron
TGGACAGTTGAAAGCCTTCT+TGG 0.292560 5.1:+67062255 None:intergenic
TCTGGTTGCTCAGGTCTATC+TGG 0.304316 5.1:+67062837 None:intergenic
AGCACCGGAACATGCAAATA+TGG 0.322651 5.1:-67062798 MS.gene81643:CDS
TTTGTGCTATCCTTTCTTTA+GGG 0.324288 5.1:+67062754 None:intergenic
TGCTCTTATTACAGAATCTA+TGG 0.326952 5.1:-67062393 MS.gene81643:CDS
GCAGCACCTCTCCTGTCTTT+GGG 0.333423 5.1:+67063850 None:intergenic
TTCGTATTGCAGAAGCTATT+CGG 0.340006 5.1:-67065366 MS.gene81643:intron
CCGAGAATGTCATATTTATC+TGG 0.351902 5.1:-67063489 MS.gene81643:CDS
ATCTATGGAGTATGCAAGTT+TGG 0.357289 5.1:-67062378 MS.gene81643:CDS
CCAGATAAATATGACATTCT+CGG 0.368337 5.1:+67063489 None:intergenic
CCACAACAGGCAGCTTCCTT+TGG 0.370576 5.1:-67063603 MS.gene81643:CDS
TCCACAACTGTTACTTCATC+AGG 0.377937 5.1:-67063549 MS.gene81643:CDS
GCATTATGCCTGCGCTGAGC+TGG 0.382644 5.1:-67063419 MS.gene81643:CDS
GAGGGAGGGGACGCCGCCAC+TGG 0.385507 5.1:+67063570 None:intergenic
CTATCCTTTCTTTAGGGTGG+TGG 0.386879 5.1:+67062760 None:intergenic
ATAAAACCAGTAGGCATTGC+AGG 0.387637 5.1:+67062939 None:intergenic
AAGACAGGAACATGTAAGTA+TGG 0.393613 5.1:-67063895 MS.gene81643:CDS
ACCGTCGTCCGAGTCTTTAC+AGG 0.393788 5.1:-67062118 MS.gene81643:CDS
TGTCCCTATTACATGAGAAC+TGG 0.394120 5.1:-67063663 MS.gene81643:CDS
CCCGTTGTCTTCAATACTTT+AGG 0.398288 5.1:-67063826 MS.gene81643:CDS
CTCAAATAATATACGCAGTC+AGG 0.416206 5.1:+67065268 None:intergenic
CTGACTGCGTATATTATTTG+AGG 0.418766 5.1:-67065267 MS.gene81643:CDS
AAAGCCTTCTTGGATTAGTA+AGG 0.427107 5.1:+67062265 None:intergenic
TATTTACAGTCTGGTTGCTC+AGG 0.430194 5.1:+67062828 None:intergenic
GCCTCAATCAATGCCTTATC+CGG 0.436673 5.1:-67065305 MS.gene81643:CDS
AATGCACTTACAGGTCTCAT+AGG 0.440267 5.1:+67062705 None:intergenic
CTCATAAAGTATTTACAGTC+TGG 0.442202 5.1:+67062819 None:intergenic
AAGAACTTCCTGAGAGAGTT+GGG 0.442954 5.1:-67064979 MS.gene81643:CDS
GCAGGAAACCCACCAGCATA+TGG 0.444203 5.1:+67063522 None:intergenic
TCAGGTTGCCCAACTCTCTC+AGG 0.445004 5.1:+67064971 None:intergenic
TTCTGAGAGATAGCCACAAC+TGG 0.446204 5.1:+67062333 None:intergenic
TTTAGGTCTTCCCATGCGTC+AGG 0.446654 5.1:-67063809 MS.gene81643:intron
GACCCAGTTCTCATGTAATA+GGG 0.459797 5.1:+67063660 None:intergenic
GGCATAATGCCTTGTGAAGA+AGG 0.459870 5.1:+67063432 None:intergenic
CAACAGGCAGCTTCCTTTGG+AGG 0.460678 5.1:-67063600 MS.gene81643:CDS
AATAAGCATACCTCACAATC+AGG 0.465727 5.1:+67064953 None:intergenic
AGATCCATATTTGCATGTTC+CGG 0.472187 5.1:+67062794 None:intergenic
CCATCTGGTGATAACATTGA+AGG 0.474193 5.1:-67065994 MS.gene81643:intron
AGCTTGTTTAGATGAATCTT+CGG 0.476106 5.1:+67062164 None:intergenic
TGCGTATATTATTTGAGGAC+TGG 0.478797 5.1:-67065262 MS.gene81643:CDS
TCACCAGGTCGATCCGGATA+AGG 0.480066 5.1:+67065292 None:intergenic
GGACTGGAATGTGTGGTTAC+GGG 0.482004 5.1:-67065246 MS.gene81643:CDS
CAAGTTTCATCATCCACAAC+AGG 0.488215 5.1:-67063616 MS.gene81643:CDS
TCAGGTTCACCAGGTCGATC+CGG 0.491203 5.1:+67065286 None:intergenic
AATGTCATATTTATCTGGAC+AGG 0.494113 5.1:-67063484 MS.gene81643:CDS
ATTAACCCTGCAATGCCTAC+TGG 0.496129 5.1:-67062945 MS.gene81643:CDS
AATGCTGGTTCTAATCCATC+TGG 0.496458 5.1:-67066009 MS.gene81643:CDS
ATTACAGGTGAAATGTTAGC+AGG 0.497677 5.1:+67065202 None:intergenic
CCTAAAGTATTGAAGACAAC+GGG 0.502456 5.1:+67063826 None:intergenic
CCAAAGGAAGCTGCCTGTTG+TGG 0.502820 5.1:+67063603 None:intergenic
ATGGAGATGTCTCGGTTGGT+TGG 0.505736 5.1:+67062235 None:intergenic
GTGCTATCCTTTCTTTAGGG+TGG 0.514914 5.1:+67062757 None:intergenic
AGGAGGCACATAAGATTGAA+TGG 0.519059 5.1:+67063461 None:intergenic
GAAGAACTTCCTGAGAGAGT+TGG 0.521193 5.1:-67064980 MS.gene81643:CDS
AGGACTGGAATGTGTGGTTA+CGG 0.521390 5.1:-67065247 MS.gene81643:CDS
CCTTCAATGTTATCACCAGA+TGG 0.522380 5.1:+67065994 None:intergenic
AGTAACAGTTGTGGAGGGAG+GGG 0.529224 5.1:+67063557 None:intergenic
TTCGATGGAGATGTCTCGGT+TGG 0.530171 5.1:+67062231 None:intergenic
AATATCATCATCCCAAAGAC+AGG 0.531632 5.1:-67063861 MS.gene81643:CDS
TTGTCAGTTGATTGTTTCGA+TGG 0.531763 5.1:+67062216 None:intergenic
ATGCTGGTGGGTTTCCTGCA+TGG 0.533086 5.1:-67063518 MS.gene81643:CDS
TGTCTACGACTACATGAATC+CGG 0.541765 5.1:-67062904 MS.gene81643:CDS
AGAGATGCATCGAATACTGA+TGG 0.548135 5.1:+67062288 None:intergenic
TATACGCAGTCAGGTTCACC+AGG 0.548463 5.1:+67065277 None:intergenic
TGTAAATACTTTATGAGCAC+CGG 0.550440 5.1:-67062813 MS.gene81643:CDS
AGAGACACTTTCTGGTGGAC+AGG 0.555997 5.1:-67062877 MS.gene81643:CDS
AGTTCCACCACCCTAAAGAA+AGG 0.558473 5.1:-67062764 MS.gene81643:CDS
TCCTGTAAAGACTCGGACGA+CGG 0.558630 5.1:+67062117 None:intergenic
GAAGTAACAGTTGTGGAGGG+AGG 0.561560 5.1:+67063555 None:intergenic
AAGTAACAGTTGTGGAGGGA+GGG 0.565711 5.1:+67063556 None:intergenic
TTGTTTCGATGGAGATGTCT+CGG 0.567749 5.1:+67062227 None:intergenic
CAAATTTGATCATCCAGTTG+TGG 0.569323 5.1:-67062346 MS.gene81643:CDS
GGATGTACAAACCTGACGCA+TGG 0.570494 5.1:+67063798 None:intergenic
TCCGGATAAGGCATTGATTG+AGG 0.571672 5.1:+67065304 None:intergenic
TAGTTGCTCCAGCTCAGCGC+AGG 0.575573 5.1:+67063411 None:intergenic
CTCTCCTTACTAATCCAAGA+AGG 0.580301 5.1:-67062269 MS.gene81643:CDS
GCTGAGCTGGAGCAACTACA+TGG 0.582157 5.1:-67063406 MS.gene81643:intron
GGATGATCAAATTTGCATGT+TGG 0.583840 5.1:+67062354 None:intergenic
CCAGAAAGTGTCTCTCCCGC+CGG 0.585264 5.1:+67062885 None:intergenic
GATGTACAAACCTGACGCAT+GGG 0.586804 5.1:+67063799 None:intergenic
GCATCGAATACTGATGGAGT+AGG 0.587386 5.1:+67062294 None:intergenic
ACATTATCAATTAATCCACT+TGG 0.589067 5.1:-67062732 MS.gene81643:CDS
ACCTGATGAAGTAACAGTTG+TGG 0.598830 5.1:+67063548 None:intergenic
GTCCCTATTACATGAGAACT+GGG 0.603851 5.1:-67063662 MS.gene81643:CDS
TGGAGGAGCTTATCCAGTGG+CGG 0.605551 5.1:-67063583 MS.gene81643:CDS
ATGCCTTATCCGGATCGACC+TGG 0.607838 5.1:-67065295 MS.gene81643:CDS
TGATGAAGTAACAGTTGTGG+AGG 0.607944 5.1:+67063551 None:intergenic
ATTCTCGGCATTGACCATGC+AGG 0.609928 5.1:+67063504 None:intergenic
GAATACTGATGGAGTAGGCG+AGG 0.611522 5.1:+67062299 None:intergenic
GTGGCTATCTCTCAGAACTA+CGG 0.612160 5.1:-67062327 MS.gene81643:CDS
TACGACTACATGAATCCGGC+GGG 0.613456 5.1:-67062900 MS.gene81643:CDS
CACTGGATAAGCTCCTCCAA+AGG 0.616300 5.1:+67063587 None:intergenic
TTAGATCCAATAAAACCAGT+AGG 0.616664 5.1:+67062930 None:intergenic
AGTTTATTCCTGTAAAGACT+CGG 0.621015 5.1:+67062110 None:intergenic
AATACTGATGGAGTAGGCGA+GGG 0.630917 5.1:+67062300 None:intergenic
GCGGGAGAGACACTTTCTGG+TGG 0.637718 5.1:-67062882 MS.gene81643:CDS
TAAAACCAGTAGGCATTGCA+GGG 0.641286 5.1:+67062940 None:intergenic
CTTTGGAGGAGCTTATCCAG+TGG 0.642465 5.1:-67063586 MS.gene81643:CDS
TTACAGGTGAAATGTTAGCA+GGG 0.642989 5.1:+67065203 None:intergenic
AGTTGGGCAACCTGATTGTG+AGG 0.647405 5.1:-67064963 MS.gene81643:intron
ACCTAAAGTATTGAAGACAA+CGG 0.650733 5.1:+67063825 None:intergenic
TATTTGAGGACTGGAATGTG+TGG 0.661824 5.1:-67065253 MS.gene81643:CDS
CTACGACTACATGAATCCGG+CGG 0.676232 5.1:-67062901 MS.gene81643:CDS
TGTTAGCAGGGTGATTATAG+CGG 0.683660 5.1:+67065215 None:intergenic
GATGAAGTAACAGTTGTGGA+GGG 0.690790 5.1:+67063552 None:intergenic
CATCATCCCAAAGACAGGAG+AGG 0.694632 5.1:-67063856 MS.gene81643:CDS
GGTCTCATAGGAAGACCAAG+TGG 0.702644 5.1:+67062717 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGTATCTTAAAATATTA+GGG + chr5.1:67065669-67065688 None:intergenic 10.0%
!!! ATAGTTTATAGATTATTTTT+TGG + chr5.1:67065600-67065619 None:intergenic 10.0%
!!! TAAAAGTATCTTAAAATATT+AGG + chr5.1:67065670-67065689 None:intergenic 10.0%
!!! TTATCTATTTGTTATATAAA+TGG + chr5.1:67064070-67064089 None:intergenic 10.0%
!! ACAAAAAACTAATAAATGTT+TGG + chr5.1:67063716-67063735 None:intergenic 15.0%
!! TACTAATATTAAATTCTGTT+TGG + chr5.1:67064193-67064212 None:intergenic 15.0%
!!! TTATTAGTTTTTTGTTTTGA+TGG - chr5.1:67063721-67063740 MS.gene81643:intron 15.0%
!!! TTTTTTTCACAATAAAAAGT+TGG + chr5.1:67065499-67065518 None:intergenic 15.0%
!! AAAACTAATAAATGTTTGGA+AGG + chr5.1:67063712-67063731 None:intergenic 20.0%
!! ATCTAGTAAATAAATTCTAC+AGG + chr5.1:67063761-67063780 None:intergenic 20.0%
!!! ATCTTGTTAAATTTTCTCAT+TGG - chr5.1:67063079-67063098 MS.gene81643:intron 20.0%
!!! CTATTTTATTTGTCGAAAAA+GGG - chr5.1:67065177-67065196 MS.gene81643:intron 20.0%
! AATTAGCAAGTATTTCAAAC+AGG + chr5.1:67063486-67063505 None:intergenic 25.0%
! AATTAGCTGAAAACATCTTT+AGG - chr5.1:67064137-67064156 MS.gene81643:intron 25.0%
! ACAACTTAATTAAGCGTTTA+TGG - chr5.1:67064009-67064028 MS.gene81643:intron 25.0%
! ACATTATCAATTAATCCACT+TGG - chr5.1:67065417-67065436 MS.gene81643:intron 25.0%
! AGAACACCAATAAATGAAAA+GGG - chr5.1:67063599-67063618 MS.gene81643:CDS 25.0%
! AGTATCTTAAAATATTAGGG+AGG + chr5.1:67065666-67065685 None:intergenic 25.0%
! CAATAAAAAGTTGGAACAAA+CGG + chr5.1:67065490-67065509 None:intergenic 25.0%
! CAGAAAGAAAAATCATGAAA+AGG + chr5.1:67062997-67063016 None:intergenic 25.0%
! GGTTCTATTATTCGTAATTT+AGG - chr5.1:67063100-67063119 MS.gene81643:intron 25.0%
! TAGAACACCAATAAATGAAA+AGG - chr5.1:67063598-67063617 MS.gene81643:CDS 25.0%
! TTAAGAGTGAATTCAAGAAT+AGG - chr5.1:67063316-67063335 MS.gene81643:intron 25.0%
! TTATTACTGCTTGAATTTGT+TGG - chr5.1:67062714-67062733 MS.gene81643:intron 25.0%
! TTGCTTTATGATGCAATAAA+GGG - chr5.1:67062590-67062609 MS.gene81643:intron 25.0%
! TTTGCTTTATGATGCAATAA+AGG - chr5.1:67062589-67062608 MS.gene81643:intron 25.0%
!! ACTTAATTTTTGTCCTTTTG+TGG - chr5.1:67063421-67063440 MS.gene81643:CDS 25.0%
!! CATTTTCTTCTTAATGCTTA+GGG - chr5.1:67065463-67065482 MS.gene81643:intron 25.0%
!! CTTTTCATGATTTTTCTTTC+TGG - chr5.1:67062995-67063014 MS.gene81643:intron 25.0%
!! GAATTTGTTCAAGGAAAAAA+AGG + chr5.1:67063342-67063361 None:intergenic 25.0%
!! GTAAAAAGTGAATTTGTTCA+AGG + chr5.1:67063351-67063370 None:intergenic 25.0%
!! TTGAAAACTTGTCTATTTTC+TGG + chr5.1:67062119-67062138 None:intergenic 25.0%
!! TTTCTTCCCTTTTCATTTAT+TGG + chr5.1:67063608-67063627 None:intergenic 25.0%
!!! AATCTACAATTGTTGCTTTT+AGG - chr5.1:67064452-67064471 MS.gene81643:intron 25.0%
!!! GCTATTTTATTTGTCGAAAA+AGG - chr5.1:67065176-67065195 MS.gene81643:intron 25.0%
!!! TGATGATGTGTTTCTATTTT+TGG - chr5.1:67062332-67062351 MS.gene81643:CDS 25.0%
AATGTCATATTTATCTGGAC+AGG - chr5.1:67064665-67064684 MS.gene81643:intron 30.0%
ACAGTCCAATACAATTAAAC+TGG + chr5.1:67062677-67062696 None:intergenic 30.0%
AGATCTCTCTATGACAATAA+TGG - chr5.1:67063777-67063796 MS.gene81643:intron 30.0%
CACAAAGTTTACTCTTCTAA+TGG - chr5.1:67064400-67064419 MS.gene81643:intron 30.0%
CATGAGCACATAATATATGT+AGG - chr5.1:67063510-67063529 MS.gene81643:CDS 30.0%
CATTAGAAGAGTAAACTTTG+TGG + chr5.1:67064402-67064421 None:intergenic 30.0%
CATTCAACCCCTTTAATAAT+AGG - chr5.1:67063455-67063474 MS.gene81643:CDS 30.0%
CCAGATAAATATGACATTCT+CGG + chr5.1:67064663-67064682 None:intergenic 30.0%
CTATTATTAAAGGGGTTGAA+TGG + chr5.1:67063457-67063476 None:intergenic 30.0%
CTCATACTTCATTAGATTTC+AGG - chr5.1:67063132-67063151 MS.gene81643:intron 30.0%
CTGATCCAGTTTAATTGTAT+TGG - chr5.1:67062669-67062688 MS.gene81643:intron 30.0%
CTTCTTCTTAAATTACGCTA+TGG + chr5.1:67063824-67063843 None:intergenic 30.0%
GGACAAAAATTAAGTGCAAA+AGG + chr5.1:67063416-67063435 None:intergenic 30.0%
GTACTAGAAATATCAAGTTC+AGG - chr5.1:67063882-67063901 MS.gene81643:CDS 30.0%
TAAGAAGAAAATGCACTTAC+AGG + chr5.1:67065456-67065475 None:intergenic 30.0%
TGATTCTATGCAAGTAAACA+TGG + chr5.1:67062523-67062542 None:intergenic 30.0%
TGCTCTTATTACAGAATCTA+TGG - chr5.1:67065756-67065775 MS.gene81643:intron 30.0%
TGTAAATACTTTATGAGCAC+CGG - chr5.1:67065336-67065355 MS.gene81643:CDS 30.0%
TTAGATCCAATAAAACCAGT+AGG + chr5.1:67065222-67065241 None:intergenic 30.0%
TTATTATACTTGATCGCACA+TGG - chr5.1:67062547-67062566 MS.gene81643:intron 30.0%
TTTGTGCTATCCTTTCTTTA+GGG + chr5.1:67065398-67065417 None:intergenic 30.0%
! AAATAAAGCACTTGGTTCAA+AGG + chr5.1:67064376-67064395 None:intergenic 30.0%
! AATAAAGCACTTGGTTCAAA+GGG + chr5.1:67064375-67064394 None:intergenic 30.0%
! AGCTTGTTTAGATGAATCTT+CGG + chr5.1:67065988-67066007 None:intergenic 30.0%
! ATATACTGATTAACCTGGTA+TGG - chr5.1:67064832-67064851 MS.gene81643:intron 30.0%
! ATTCTGTTTGGAATAGCTTA+TGG + chr5.1:67064181-67064200 None:intergenic 30.0%
! CAAAAGATGATTTTCCACAT+TGG + chr5.1:67063686-67063705 None:intergenic 30.0%
! CGCTTAATTAAGTTGTCTAT+AGG + chr5.1:67064005-67064024 None:intergenic 30.0%
! CTCATAAAGTATTTACAGTC+TGG + chr5.1:67065333-67065352 None:intergenic 30.0%
! GCATTTTCTTCTTAATGCTT+AGG - chr5.1:67065462-67065481 MS.gene81643:intron 30.0%
! GTTCTGTTTTCGATGTTAAT+CGG + chr5.1:67065011-67065030 None:intergenic 30.0%
! TGATTTTCTGATTCCTATGT+TGG - chr5.1:67065711-67065730 MS.gene81643:intron 30.0%
! TGTGGAAAAAATAAAGCACT+TGG + chr5.1:67064384-67064403 None:intergenic 30.0%
! TGTTCTGATCATCATTGTTT+TGG - chr5.1:67062255-67062274 MS.gene81643:CDS 30.0%
! TTGCAGTATTTTCTTAAGAC+AGG - chr5.1:67064239-67064258 MS.gene81643:intron 30.0%
!! ACCTAAAGTATTGAAGACAA+CGG + chr5.1:67064327-67064346 None:intergenic 30.0%
!! AGATTTCAGGTTACTCAATA+TGG - chr5.1:67063145-67063164 MS.gene81643:intron 30.0%
!! CATTGATTTCCAATCACATT+TGG - chr5.1:67064975-67064994 MS.gene81643:CDS 30.0%
!! TCTCTGAAATATTTAGCCTA+GGG - chr5.1:67063562-67063581 MS.gene81643:CDS 30.0%
!! TTAACTTGTGTGAGTGAAAA+AGG - chr5.1:67062462-67062481 MS.gene81643:intron 30.0%
!! TTCTCTGAAATATTTAGCCT+AGG - chr5.1:67063561-67063580 MS.gene81643:CDS 30.0%
!!! TGTGAGGTATGCTTATTTTT+TGG - chr5.1:67063202-67063221 MS.gene81643:intron 30.0%
AAAAGAAAGAGCTCCATTAC+AGG + chr5.1:67062965-67062984 None:intergenic 35.0%
AAAAGGGAAGAAACTGATGT+AGG - chr5.1:67063615-67063634 MS.gene81643:CDS 35.0%
AAGACAGGAACATGTAAGTA+TGG - chr5.1:67064254-67064273 MS.gene81643:intron 35.0%
AATAAGCATACCTCACAATC+AGG + chr5.1:67063199-67063218 None:intergenic 35.0%
AATAAGTTATGCTGCCAATG+TGG - chr5.1:67063669-67063688 MS.gene81643:CDS 35.0%
AATATCATCATCCCAAAGAC+AGG - chr5.1:67064288-67064307 MS.gene81643:intron 35.0%
ACATAGCCAAACATCCTAAA+AGG + chr5.1:67065065-67065084 None:intergenic 35.0%
ACCAACAACTTTCATTGCAT+TGG + chr5.1:67063973-67063992 None:intergenic 35.0%
AGATCCATATTTGCATGTTC+CGG + chr5.1:67065358-67065377 None:intergenic 35.0%
AGGCGAAGCCTATTATTAAA+GGG + chr5.1:67063466-67063485 None:intergenic 35.0%
ATCTATGGAGTATGCAAGTT+TGG - chr5.1:67065771-67065790 MS.gene81643:intron 35.0%
ATTACAGGTGAAATGTTAGC+AGG + chr5.1:67062950-67062969 None:intergenic 35.0%
ATTCTACAGGACACACTATA+AGG + chr5.1:67063748-67063767 None:intergenic 35.0%
CAAATTTGATCATCCAGTTG+TGG - chr5.1:67065803-67065822 MS.gene81643:intron 35.0%
CAATGTTGTTGTATTGTGTG+AGG - chr5.1:67062412-67062431 MS.gene81643:intron 35.0%
CCGAGAATGTCATATTTATC+TGG - chr5.1:67064660-67064679 MS.gene81643:intron 35.0%
CTCAAATAATATACGCAGTC+AGG + chr5.1:67062884-67062903 None:intergenic 35.0%
CTGACTGCGTATATTATTTG+AGG - chr5.1:67062882-67062901 MS.gene81643:CDS 35.0%
GCGACATCTAGTAGTAAAAA+TGG + chr5.1:67064924-67064943 None:intergenic 35.0%
GGATGATCAAATTTGCATGT+TGG + chr5.1:67065798-67065817 None:intergenic 35.0%
GTTTGTGCTATCCTTTCTTT+AGG + chr5.1:67065399-67065418 None:intergenic 35.0%
TAGACATGAAGCAGTTTCTT+AGG - chr5.1:67063019-67063038 MS.gene81643:intron 35.0%
TCCAATGCAATGAAAGTTGT+TGG - chr5.1:67063969-67063988 MS.gene81643:intron 35.0%
TGCGTATATTATTTGAGGAC+TGG - chr5.1:67062887-67062906 MS.gene81643:CDS 35.0%
TGCTAACATTTCACCTGTAA+TGG - chr5.1:67062949-67062968 MS.gene81643:CDS 35.0%
TGGAAATAAGAGACCACAAA+AGG + chr5.1:67063437-67063456 None:intergenic 35.0%
TTACAGGTGAAATGTTAGCA+GGG + chr5.1:67062949-67062968 None:intergenic 35.0%
TTAGCTAAACGAATACACGA+AGG - chr5.1:67064875-67064894 MS.gene81643:intron 35.0%
TTCGTATTGCAGAAGCTATT+CGG - chr5.1:67062783-67062802 MS.gene81643:CDS 35.0%
TTCTGCAATACGAATCACAA+AGG + chr5.1:67062777-67062796 None:intergenic 35.0%
TTGTCAGTTGATTGTTTCGA+TGG + chr5.1:67065936-67065955 None:intergenic 35.0%
TTTCATGAACATGTAGTCTG+TGG - chr5.1:67063049-67063068 MS.gene81643:intron 35.0%
TTTCCTAAACAAGACAAGAC+TGG + chr5.1:67065033-67065052 None:intergenic 35.0%
! ACTGTTTTCAAAAGCTATCC+TGG - chr5.1:67064102-67064121 MS.gene81643:intron 35.0%
! CACACATATACTGATTAACC+TGG - chr5.1:67064827-67064846 MS.gene81643:intron 35.0%
! GACAGTTTTTAAACCATACC+AGG + chr5.1:67064848-67064867 None:intergenic 35.0%
!! AAAGCCTTCTTGGATTAGTA+AGG + chr5.1:67065887-67065906 None:intergenic 35.0%
!! AGACAAGTTTTCAAGAATGC+TGG - chr5.1:67062125-67062144 MS.gene81643:CDS 35.0%
!! CCTAAAGTATTGAAGACAAC+GGG + chr5.1:67064326-67064345 None:intergenic 35.0%
!! GGAAATATTCCTAGCCTTTT+AGG - chr5.1:67065048-67065067 MS.gene81643:intron 35.0%
!! TCTTTAGGACATGTCATAAG+CGG - chr5.1:67064152-67064171 MS.gene81643:intron 35.0%
!!! CTGATCATCATTGTTTTGGT+TGG - chr5.1:67062259-67062278 MS.gene81643:CDS 35.0%
!!! TTTCTTTCCCTTGTTTTGAG+CGG - chr5.1:67063251-67063270 MS.gene81643:intron 35.0%
AAGAAACTGATGTAGGTCGT+AGG - chr5.1:67063622-67063641 MS.gene81643:CDS 40.0%
AAGAACTTCCTGAGAGAGTT+GGG - chr5.1:67063170-67063189 MS.gene81643:intron 40.0%
AATGCACTTACAGGTCTCAT+AGG + chr5.1:67065447-67065466 None:intergenic 40.0%
ACCTGATGAAGTAACAGTTG+TGG + chr5.1:67064604-67064623 None:intergenic 40.0%
ACTGAGACTATGCTCATACA+AGG - chr5.1:67063534-67063553 MS.gene81643:CDS 40.0%
AGACCCAGTTCTCATGTAAT+AGG + chr5.1:67064493-67064512 None:intergenic 40.0%
AGAGATGCATCGAATACTGA+TGG + chr5.1:67065864-67065883 None:intergenic 40.0%
ATTGTATTGGACTGTGAGTG+TGG - chr5.1:67062682-67062701 MS.gene81643:intron 40.0%
ATTTGAGCGCCAAATGTGAT+TGG + chr5.1:67064987-67065006 None:intergenic 40.0%
CAAGTTTCATCATCCACAAC+AGG - chr5.1:67064533-67064552 MS.gene81643:intron 40.0%
CAGGCGAAGCCTATTATTAA+AGG + chr5.1:67063467-67063486 None:intergenic 40.0%
CCATCTGGTGATAACATTGA+AGG - chr5.1:67062155-67062174 MS.gene81643:CDS 40.0%
CCCGTTGTCTTCAATACTTT+AGG - chr5.1:67064323-67064342 MS.gene81643:intron 40.0%
CCTTCAATGTTATCACCAGA+TGG + chr5.1:67062158-67062177 None:intergenic 40.0%
CCTTGTGAAGAAGGCAAAAA+AGG + chr5.1:67064711-67064730 None:intergenic 40.0%
CTAACAATGAACATGTCCCT+AGG + chr5.1:67063581-67063600 None:intergenic 40.0%
CTAATTTCCATAAGCTCTCC+AGG + chr5.1:67064123-67064142 None:intergenic 40.0%
CTCTCCTTACTAATCCAAGA+AGG - chr5.1:67065880-67065899 MS.gene81643:intron 40.0%
CTGAGACTATGCTCATACAA+GGG - chr5.1:67063535-67063554 MS.gene81643:CDS 40.0%
GACCCAGTTCTCATGTAATA+GGG + chr5.1:67064492-67064511 None:intergenic 40.0%
GATGAAGTAACAGTTGTGGA+GGG + chr5.1:67064600-67064619 None:intergenic 40.0%
GCATAAACCACATCCACATT+CGG + chr5.1:67063289-67063308 None:intergenic 40.0%
GGCGAAGCCTATTATTAAAG+GGG + chr5.1:67063465-67063484 None:intergenic 40.0%
GTCCCTATTACATGAGAACT+GGG - chr5.1:67064487-67064506 MS.gene81643:intron 40.0%
TACATGCATTCAGTGGTTAC+TGG - chr5.1:67065108-67065127 MS.gene81643:intron 40.0%
TATTTACAGTCTGGTTGCTC+AGG + chr5.1:67065324-67065343 None:intergenic 40.0%
TATTTGAGGACTGGAATGTG+TGG - chr5.1:67062896-67062915 MS.gene81643:CDS 40.0%
TCGTAACTACATGCATTCAG+TGG - chr5.1:67065101-67065120 MS.gene81643:intron 40.0%
TGATGAAGTAACAGTTGTGG+AGG + chr5.1:67064601-67064620 None:intergenic 40.0%
TGTCCCTATTACATGAGAAC+TGG - chr5.1:67064486-67064505 MS.gene81643:intron 40.0%
TGTCTACGACTACATGAATC+CGG - chr5.1:67065245-67065264 MS.gene81643:CDS 40.0%
TGTGAAGAAGGCAAAAAAGG+AGG + chr5.1:67064708-67064727 None:intergenic 40.0%
TGTTAGCAGGGTGATTATAG+CGG + chr5.1:67062937-67062956 None:intergenic 40.0%
TTGTTTCGATGGAGATGTCT+CGG + chr5.1:67065925-67065944 None:intergenic 40.0%
! AGGAGGCACATAAGATTGAA+TGG + chr5.1:67064691-67064710 None:intergenic 40.0%
! ATAAAACCAGTAGGCATTGC+AGG + chr5.1:67065213-67065232 None:intergenic 40.0%
! TAAAACCAGTAGGCATTGCA+GGG + chr5.1:67065212-67065231 None:intergenic 40.0%
! TCATCAGGTTTTCCATATGC+TGG - chr5.1:67064615-67064634 MS.gene81643:intron 40.0%
! TCCACAACTGTTACTTCATC+AGG - chr5.1:67064600-67064619 MS.gene81643:intron 40.0%
!! AATGCTGGTTCTAATCCATC+TGG - chr5.1:67062140-67062159 MS.gene81643:CDS 40.0%
!! GAACCAGTCTTGTCTTGTTT+AGG - chr5.1:67065027-67065046 MS.gene81643:intron 40.0%
!!! CCTTTTTTGCCTTCTTCACA+AGG - chr5.1:67064708-67064727 MS.gene81643:intron 40.0%
!!! GCAATGCCTACTGGTTTTAT+TGG - chr5.1:67065213-67065232 MS.gene81643:CDS 40.0%
!!! TCCTAGCCTTTTAGGATGTT+TGG - chr5.1:67065056-67065075 MS.gene81643:intron 40.0%
AAGCTATCCTGGAGAGCTTA+TGG - chr5.1:67064113-67064132 MS.gene81643:intron 45.0%
AAGTAACAGTTGTGGAGGGA+GGG + chr5.1:67064596-67064615 None:intergenic 45.0%
AATACTGATGGAGTAGGCGA+GGG + chr5.1:67065852-67065871 None:intergenic 45.0%
AGAACTGGGTCTTGCAAGTT+TGG - chr5.1:67064501-67064520 MS.gene81643:intron 45.0%
AGGACTGGAATGTGTGGTTA+CGG - chr5.1:67062902-67062921 MS.gene81643:CDS 45.0%
AGTTCCACCACCCTAAAGAA+AGG - chr5.1:67065385-67065404 MS.gene81643:intron 45.0%
ATTAACCCTGCAATGCCTAC+TGG - chr5.1:67065204-67065223 MS.gene81643:intron 45.0%
CATGAAACCGAATGTGGATG+TGG - chr5.1:67063279-67063298 MS.gene81643:intron 45.0%
CTGATGTAGGTCGTAGGATA+CGG - chr5.1:67063628-67063647 MS.gene81643:CDS 45.0%
GAAGAACTTCCTGAGAGAGT+TGG - chr5.1:67063169-67063188 MS.gene81643:intron 45.0%
GATGTACAAACCTGACGCAT+GGG + chr5.1:67064353-67064372 None:intergenic 45.0%
GCATCGAATACTGATGGAGT+AGG + chr5.1:67065858-67065877 None:intergenic 45.0%
GCCAAACATCCTAAAAGGCT+AGG + chr5.1:67065060-67065079 None:intergenic 45.0%
GCCTCAATCAATGCCTTATC+CGG - chr5.1:67062844-67062863 MS.gene81643:CDS 45.0%
GGCATAATGCCTTGTGAAGA+AGG + chr5.1:67064720-67064739 None:intergenic 45.0%
GTGCTTCATGAAACCGAATG+TGG - chr5.1:67063273-67063292 MS.gene81643:intron 45.0%
GTGGCTATCTCTCAGAACTA+CGG - chr5.1:67065822-67065841 MS.gene81643:intron 45.0%
TGGACAGTTGAAAGCCTTCT+TGG + chr5.1:67065897-67065916 None:intergenic 45.0%
! AGCACCGGAACATGCAAATA+TGG - chr5.1:67065351-67065370 MS.gene81643:CDS 45.0%
! CAGGTTTTCCATATGCTGGT+GGG - chr5.1:67064619-67064638 MS.gene81643:intron 45.0%
! GTGCTATCCTTTCTTTAGGG+TGG + chr5.1:67065395-67065414 None:intergenic 45.0%
! TCAGGTTTTCCATATGCTGG+TGG - chr5.1:67064618-67064637 MS.gene81643:intron 45.0%
! TCCTATGTTGGTTGTCTGCA+GGG - chr5.1:67065723-67065742 MS.gene81643:intron 45.0%
! TTCCTATGTTGGTTGTCTGC+AGG - chr5.1:67065722-67065741 MS.gene81643:intron 45.0%
! TTCTGAGAGATAGCCACAAC+TGG + chr5.1:67065819-67065838 None:intergenic 45.0%
!! ATGAAGCACCGCTCAAAACA+AGG + chr5.1:67063262-67063281 None:intergenic 45.0%
!! CTATCCTTTCTTTAGGGTGG+TGG + chr5.1:67065392-67065411 None:intergenic 45.0%
!! TCCGGATAAGGCATTGATTG+AGG + chr5.1:67062848-67062867 None:intergenic 45.0%
!! TGAAGCACCGCTCAAAACAA+GGG + chr5.1:67063261-67063280 None:intergenic 45.0%
AGGTCGTAGGATACGGAATG+AGG - chr5.1:67063635-67063654 MS.gene81643:CDS 50.0%
AGTAACAGTTGTGGAGGGAG+GGG + chr5.1:67064595-67064614 None:intergenic 50.0%
AGTTGGGCAACCTGATTGTG+AGG - chr5.1:67063186-67063205 MS.gene81643:intron 50.0%
ATGGAGATGTCTCGGTTGGT+TGG + chr5.1:67065917-67065936 None:intergenic 50.0%
CACTGGATAAGCTCCTCCAA+AGG + chr5.1:67064565-67064584 None:intergenic 50.0%
CATCATCCCAAAGACAGGAG+AGG - chr5.1:67064293-67064312 MS.gene81643:intron 50.0%
CTACGACTACATGAATCCGG+CGG - chr5.1:67065248-67065267 MS.gene81643:CDS 50.0%
GAAGTAACAGTTGTGGAGGG+AGG + chr5.1:67064597-67064616 None:intergenic 50.0%
GAATACTGATGGAGTAGGCG+AGG + chr5.1:67065853-67065872 None:intergenic 50.0%
GGACTGGAATGTGTGGTTAC+GGG - chr5.1:67062903-67062922 MS.gene81643:CDS 50.0%
GGATGTACAAACCTGACGCA+TGG + chr5.1:67064354-67064373 None:intergenic 50.0%
GGTCTCATAGGAAGACCAAG+TGG + chr5.1:67065435-67065454 None:intergenic 50.0%
TACGACTACATGAATCCGGC+GGG - chr5.1:67065249-67065268 MS.gene81643:CDS 50.0%
TATACGCAGTCAGGTTCACC+AGG + chr5.1:67062875-67062894 None:intergenic 50.0%
TCCCTGCAGACAACCAACAT+AGG + chr5.1:67065727-67065746 None:intergenic 50.0%
TCCTGTAAAGACTCGGACGA+CGG + chr5.1:67066035-67066054 None:intergenic 50.0%
TCTGGTTGCTCAGGTCTATC+TGG + chr5.1:67065315-67065334 None:intergenic 50.0%
TTCGATGGAGATGTCTCGGT+TGG + chr5.1:67065921-67065940 None:intergenic 50.0%
TTTAGGTCTTCCCATGCGTC+AGG - chr5.1:67064340-67064359 MS.gene81643:intron 50.0%
! AGAGACACTTTCTGGTGGAC+AGG - chr5.1:67065272-67065291 MS.gene81643:CDS 50.0%
! CTTTGGAGGAGCTTATCCAG+TGG - chr5.1:67064563-67064582 MS.gene81643:intron 50.0%
!! ATTCTCGGCATTGACCATGC+AGG + chr5.1:67064648-67064667 None:intergenic 50.0%
ACCGTCGTCCGAGTCTTTAC+AGG - chr5.1:67066031-67066050 MS.gene81643:CDS 55.0%
ATGCCTTATCCGGATCGACC+TGG - chr5.1:67062854-67062873 MS.gene81643:CDS 55.0%
CAACAGGCAGCTTCCTTTGG+AGG - chr5.1:67064549-67064568 MS.gene81643:intron 55.0%
CCAAAGGAAGCTGCCTGTTG+TGG + chr5.1:67064549-67064568 None:intergenic 55.0%
CCACAACAGGCAGCTTCCTT+TGG - chr5.1:67064546-67064565 MS.gene81643:intron 55.0%
GCAGCACCTCTCCTGTCTTT+GGG + chr5.1:67064302-67064321 None:intergenic 55.0%
GCAGGAAACCCACCAGCATA+TGG + chr5.1:67064630-67064649 None:intergenic 55.0%
GCTGAGCTGGAGCAACTACA+TGG - chr5.1:67064743-67064762 MS.gene81643:intron 55.0%
TCACCAGGTCGATCCGGATA+AGG + chr5.1:67062860-67062879 None:intergenic 55.0%
TCAGGTTCACCAGGTCGATC+CGG + chr5.1:67062866-67062885 None:intergenic 55.0%
TGCAGCACCTCTCCTGTCTT+TGG + chr5.1:67064303-67064322 None:intergenic 55.0%
TGGAGGAGCTTATCCAGTGG+CGG - chr5.1:67064566-67064585 MS.gene81643:intron 55.0%
! TCAGGTTGCCCAACTCTCTC+AGG + chr5.1:67063181-67063200 None:intergenic 55.0%
!! ATGCTGGTGGGTTTCCTGCA+TGG - chr5.1:67064631-67064650 MS.gene81643:intron 55.0%
GCATTATGCCTGCGCTGAGC+TGG - chr5.1:67064730-67064749 MS.gene81643:intron 60.0%
GCGGGAGAGACACTTTCTGG+TGG - chr5.1:67065267-67065286 MS.gene81643:CDS 60.0%
TAGTTGCTCCAGCTCAGCGC+AGG + chr5.1:67064741-67064760 None:intergenic 60.0%
!! CCAGAAAGTGTCTCTCCCGC+CGG + chr5.1:67065267-67065286 None:intergenic 60.0%
CCGGCGGGAGAGACACTTTC+TGG - chr5.1:67065264-67065283 MS.gene81643:CDS 65.0%
! GAGGGAGGGGACGCCGCCAC+TGG + chr5.1:67064582-67064601 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 67062113 67066058 67062113 ID=MS.gene81643
chr5.1 mRNA 67062113 67066058 67062113 ID=MS.gene81643.t1;Parent=MS.gene81643
chr5.1 exon 67065995 67066058 67065995 ID=MS.gene81643.t1.exon1;Parent=MS.gene81643.t1
chr5.1 CDS 67065995 67066058 67065995 ID=cds.MS.gene81643.t1;Parent=MS.gene81643.t1
chr5.1 exon 67065207 67065376 67065207 ID=MS.gene81643.t1.exon2;Parent=MS.gene81643.t1
chr5.1 CDS 67065207 67065376 67065207 ID=cds.MS.gene81643.t1;Parent=MS.gene81643.t1
chr5.1 exon 67064964 67065017 67064964 ID=MS.gene81643.t1.exon3;Parent=MS.gene81643.t1
chr5.1 CDS 67064964 67065017 67064964 ID=cds.MS.gene81643.t1;Parent=MS.gene81643.t1
chr5.1 exon 67063810 67063926 67063810 ID=MS.gene81643.t1.exon4;Parent=MS.gene81643.t1
chr5.1 CDS 67063810 67063926 67063810 ID=cds.MS.gene81643.t1;Parent=MS.gene81643.t1
chr5.1 exon 67063407 67063697 67063407 ID=MS.gene81643.t1.exon5;Parent=MS.gene81643.t1
chr5.1 CDS 67063407 67063697 67063407 ID=cds.MS.gene81643.t1;Parent=MS.gene81643.t1
chr5.1 exon 67062716 67062973 67062716 ID=MS.gene81643.t1.exon6;Parent=MS.gene81643.t1
chr5.1 CDS 67062716 67062973 67062716 ID=cds.MS.gene81643.t1;Parent=MS.gene81643.t1
chr5.1 exon 67062113 67062427 67062113 ID=MS.gene81643.t1.exon7;Parent=MS.gene81643.t1
chr5.1 CDS 67062113 67062427 67062113 ID=cds.MS.gene81643.t1;Parent=MS.gene81643.t1
Gene Sequence

>MS.gene81643

ATGCCAGAAAATAGACAAGTTTTCAAGAATGCTGGTTCTAATCCATCTGGTGATAACATTGAAGGTAATTCAATGAATGATTGATTTTTCTTTGAATTTTTTCATGTTTTGTGTTATGATTTGTTGTTTATGTTGTTTTTCTTGTTCTGATCATCATTGTTTTGGTTGGAAATATTTTATTTTCATTGATGATGATGATGATGATGATGATGATGATGATGATGATGTGTTTCTATTTTTGGTAGAATGAATTTGATTTGAATTATTTCTATTTTTGTTTTGTTTATGATTGATTCATGCAATGTTGTTGTATTGTGTGAGGTTTGATGATTTTTTTTGAAACTATGAGTTAACTTGTGTGAGTGAAAAAGGTTGCATCAATAGAAAATTATTATTATATTATGATTCCATGTTTACTTGCATAGAATCAAGTGTTATTATACTTGATCGCACATGGTTTTACAAAATTTGTGTACTTTGCTTTATGATGCAATAAAGGGTCGTAATCGTAATCTGCGTATTTTGATTTCAAATTCTTTATGATAGCTTTGAATTTCTGATCCAGTTTAATTGTATTGGACTGTGAGTGTGGTAATTTGTGTTATTACTGCTTGAATTTGTTGGAATGTTTGTTGAGAGATTGTGCAAGATATGTCTGATTCCTTTGTGATTCGTATTGCAGAAGCTATTCGGCGTTTGAAAATCAATAGTACTCGAGACAGAGATGCTGTGCCTCAATCAATGCCTTATCCGGATCGACCTGGTGAACCTGACTGCGTATATTATTTGAGGACTGGAATGTGTGGTTACGGGAGTAACTGCCGCTATAATCACCCTGCTAACATTTCACCTGTAATGGAGCTCTTTCTTTTCTTTTCTTTCCTTTTCATGATTTTTCTTTCTGGATAGACATGAAGCAGTTTCTTAGGTCAAATATTTCATGAACATGTAGTCTGTGGAATTGTAATCTTGTTAAATTTTCTCATTGGTTCTATTATTCGTAATTTAGGTAAAAGTTTCTCATACTTCATTAGATTTCAGGTTACTCAATATGGTGAAGAACTTCCTGAGAGAGTTGGGCAACCTGATTGTGAGGTATGCTTATTTTTTGGTAACTAAAAATGTATTTGTTGTCATTTTTCTTTCCCTTGTTTTGAGCGGTGCTTCATGAAACCGAATGTGGATGTGGTTTATGCAAGAACTTTAAGAGTGAATTCAAGAATAGGCCTTTTTTTCCTTGAACAAATTCACTTTTTACATATGATATTTTACTATTTTCGTCTGACAGAAGTTTTAGTTTCCTTTTGCACTTAATTTTTGTCCTTTTGTGGTCTCTTATTTCCATTCAACCCCTTTAATAATAGGCTTCGCCTGTTTGAAATACTTGCTAATTCTTACATGAGCACATAATATATGTAGGCACTGAGACTATGCTCATACAAGGGAATTTCTCTGAAATATTTAGCCTAGGGACATGTTCATTGTTAGAACACCAATAAATGAAAAGGGAAGAAACTGATGTAGGTCGTAGGATACGGAATGAGGACGAAAAAATGAATAAGTTATGCTGCCAATGTGGAAAATCATCTTTTGTTTCCTTCCAAACATTTATTAGTTTTTTGTTTTGATGGACCTTATAGTGTGTCCTGTAGAATTTATTTACTAGATCTCTCTATGACAATAATGGCAAAGTTTCATTAGATGCTAGCCATAGCGTAATTTAAGAAGAAGAAGAAATAATGATATGAACTTTGAGTTTCACATCTATTGTACTAGAAATATCAAGTTCAGGAAATGAATAAAATCTGTAGATTTTGTGCATTCTTAATGTTAAATATTAGATACTTCATTGTTATTCCAATGCAATGAAAGTTGTTGGTAGCATATTACCTATAGACAACTTAATTAAGCGTTTATGGCTTAAGCGCTTATGATATAAGTACTTATGTATAAGCCATTTATATAACAAATAGATAAAACAAAGTCAAAACTGTTTTCAAAAGCTATCCTGGAGAGCTTATGGAAATTAGCTGAAAACATCTTTAGGACATGTCATAAGCGGTTTCCATAAGCTATTCCAAACAGAATTTAATATTAGTAACTTGTGATCTTGTTTGAAATATGTGTTGCAGTATTTTCTTAAGACAGGAACATGTAAGTATGGATCGACATGTAAATATCATCATCCCAAAGACAGGAGAGGTGCTGCACCCGTTGTCTTCAATACTTTAGGTCTTCCCATGCGTCAGGTTTGTACATCCCTTTGAACCAAGTGCTTTATTTTTTCCACAAAGTTTACTCTTCTAATGGAAGATGTTGAAGCAGTTGCGTTTTTCAATAATCTACAATTGTTGCTTTTAGGAAGAAAAATCATGTCCCTATTACATGAGAACTGGGTCTTGCAAGTTTGGAGTTGCATGCAAGTTTCATCATCCACAACAGGCAGCTTCCTTTGGAGGAGCTTATCCAGTGGCGGCGTCCCCTCCCTCCACAACTGTTACTTCATCAGGTTTTCCATATGCTGGTGGGTTTCCTGCATGGTCAATGCCGAGAATGTCATATTTATCTGGACAGGCCATTCAATCTTATGTGCCTCCTTTTTTGCCTTCTTCACAAGGCATTATGCCTGCGCTGAGCTGGAGCAACTACATGGTTAGTTAAAAACTGTTGAATGTCGTGTTTATATTTACAGTTACTGTGTTATTGAATGATCACACACATATACTGATTAACCTGGTATGGTTTAAAAACTGTCAAATATATTAGCTAAACGAATACACGAAGGTTAGAAATTAGAAAATCTTGTTACCATTTTTACTACTAGATGTCGCACACATTGCATGATTGACAATACTTTTGTTTCATTGATTTCCAATCACATTTGGCGCTCAAATACCGATTAACATCGAAAACAGAACCAGTCTTGTCTTGTTTAGGAAATATTCCTAGCCTTTTAGGATGTTTGGCTATGTTTGATTATGTTAGATTTCGTAACTACATGCATTCAGTGGTTACTGGTTACTTACTTTTTGCTGATTCAACTAAGATGTTCTGTTTTTGACTGCTATTTTATTTGTCGAAAAAGGGAAGTATTAACCCTGCAATGCCTACTGGTTTTATTGGATCTAATCTTGTCTACGACTACATGAATCCGGCGGGAGAGACACTTTCTGGTGGACAGGTAATGAATTCATCTCTTCCAGATAGACCTGAGCAACCAGACTGTAAATACTTTATGAGCACCGGAACATGCAAATATGGATCTGATTGCAAGTTCCACCACCCTAAAGAAAGGATAGCACAAACATTATCAATTAATCCACTTGGTCTTCCTATGAGACCTGTAAGTGCATTTTCTTCTTAATGCTTAGGGTCCGTTTGTTCCAACTTTTTATTGTGAAAAAAAATCATTTTTTTAAATAAACAATTTTAGAAGTTTTCATGCATTTGTTATTTAAACAAAATGAGAATCTGAAAAAAATCTCCAAAAAATAATCTATAAACTATTGAATATCATTTTTTGTTACTTTGAAATATTTGTAAATATTATCCTCCCTAATATTTTAAGATACTTTTATAATAAGTTATCAAATTAATTTGATTTTCTGATTCCTATGTTGGTTGTCTGCAGGGAAATGCTATATGCTCTTATTACAGAATCTATGGAGTATGCAAGTTTGGTCCAACATGCAAATTTGATCATCCAGTTGTGGCTATCTCTCAGAACTACGGCTTGCCCTCGCCTACTCCATCAGTATTCGATGCATCTCTCCTTACTAATCCAAGAAGGCTTTCAACTGTCCAACCAACCGAGACATCTCCATCGAAACAATCAACTGACAAGCTTCAACAATCTGATACAAAAGCTGCTACCGAAGATTCATCTAAACAAGCTGACAGTACATCAACTTCTCGCACACCGTCGTCCGAGTCTTTACAGGAATAA
Protein sequence

>MS.gene81643.t1

MPENRQVFKNAGSNPSGDNIEEAIRRLKINSTRDRDAVPQSMPYPDRPGEPDCVYYLRTGMCGYGSNCRYNHPANISPVTQYGEELPERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPVVFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQQAASFGGAYPVAASPPSTTVTSSGFPYAGGFPAWSMPRMSYLSGQAIQSYVPPFLPSSQGIMPALSWSNYMGSINPAMPTGFIGSNLVYDYMNPAGETLSGGQVMNSSLPDRPEQPDCKYFMSTGTCKYGSDCKFHHPKERIAQTLSINPLGLPMRPGNAICSYYRIYGVCKFGPTCKFDHPVVAISQNYGLPSPTPSVFDASLLTNPRRLSTVQPTETSPSKQSTDKLQQSDTKAATEDSSKQADSTSTSRTPSSESLQE