AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070535

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070535.t1 MTR_5g085200 98.815 422 3 1 1 420 1 422 0.0 862
MS.gene070535.t1 MTR_7g079840 43.605 344 150 11 40 348 23 357 4.27e-89 276
MS.gene070535.t1 MTR_7g079840 43.605 344 150 11 40 348 13 347 5.45e-89 276
MS.gene070535.t1 MTR_3g075190 38.806 335 161 11 44 356 171 483 2.43e-67 223
MS.gene070535.t1 MTR_4g104260 37.695 321 167 11 44 345 231 537 1.94e-66 222
MS.gene070535.t1 MTR_1g088875 35.780 327 171 8 19 316 27 343 1.35e-62 206
MS.gene070535.t1 MTR_1g088875 55.263 76 30 2 269 341 92 166 2.96e-18 85.9
MS.gene070535.t1 MTR_1g088875 35.780 327 171 8 19 316 27 343 1.37e-62 206
MS.gene070535.t1 MTR_1g088875 55.263 76 30 2 269 341 92 166 2.91e-18 85.9
MS.gene070535.t1 MTR_1g088875 35.780 327 171 8 19 316 27 343 1.61e-62 206
MS.gene070535.t1 MTR_1g088875 55.263 76 30 2 269 341 92 166 3.33e-18 85.9
MS.gene070535.t1 MTR_2g019740 36.842 342 175 10 44 346 44 383 1.10e-60 204
MS.gene070535.t1 MTR_2g019740 44.578 83 45 1 84 165 42 124 3.93e-18 86.7
MS.gene070535.t1 MTR_2g019740 34.615 130 36 2 267 347 43 172 1.20e-14 75.9
MS.gene070535.t1 MTR_8g446930 34.195 348 131 11 38 341 31 324 4.85e-56 189
MS.gene070535.t1 MTR_8g446930 34.091 352 134 11 34 341 177 474 5.64e-55 190
MS.gene070535.t1 MTR_4g119280 35.799 338 156 12 44 341 43 359 8.50e-47 165
MS.gene070535.t1 MTR_4g119280 34.796 319 176 12 26 317 66 379 3.47e-36 137
MS.gene070535.t1 MTR_4g119280 48.148 81 42 0 84 164 41 121 7.45e-19 88.2
MS.gene070535.t1 MTR_4g119280 45.570 79 42 1 267 344 42 120 5.17e-15 76.6
MS.gene070535.t1 MTR_4g119280 36.047 344 188 12 26 342 66 404 1.70e-46 167
MS.gene070535.t1 MTR_4g119280 35.965 342 150 13 44 341 43 359 2.98e-46 167
MS.gene070535.t1 MTR_4g119280 48.148 81 42 0 84 164 41 121 1.04e-18 88.6
MS.gene070535.t1 MTR_4g119280 45.570 79 42 1 267 344 42 120 6.31e-15 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070535.t1 AT1G04990 45.411 414 197 9 1 401 5 402 3.51e-115 343
MS.gene070535.t1 AT1G04990 45.411 414 197 9 1 401 5 402 3.51e-115 343
MS.gene070535.t1 AT1G04990 45.411 414 197 9 1 401 5 402 3.51e-115 343
MS.gene070535.t1 AT2G32930 49.025 359 147 10 1 343 1 339 1.53e-109 330
MS.gene070535.t1 AT1G04990 43.204 412 189 9 1 401 5 382 3.50e-106 319
MS.gene070535.t1 AT2G32930 47.911 359 147 11 1 343 1 335 7.28e-104 315
MS.gene070535.t1 AT2G32930 44.604 417 178 13 27 410 1 397 4.90e-103 313
MS.gene070535.t1 AT3G02830 38.575 407 186 16 21 390 18 397 7.38e-83 259
MS.gene070535.t1 AT3G02830 39.541 392 177 15 36 390 9 377 1.07e-82 258
MS.gene070535.t1 AT5G18550 42.683 328 152 12 44 340 16 338 1.20e-80 255
MS.gene070535.t1 AT5G18550 39.175 97 48 3 267 352 15 111 8.39e-16 79.3
MS.gene070535.t1 AT2G47850 38.983 354 180 9 19 348 27 368 1.24e-80 256
MS.gene070535.t1 AT2G47850 38.983 354 180 9 19 348 27 368 1.24e-80 256
MS.gene070535.t1 AT5G18550 42.683 328 152 12 44 340 48 370 1.63e-80 256
MS.gene070535.t1 AT5G18550 39.175 97 48 3 267 352 47 143 6.83e-16 79.7
MS.gene070535.t1 AT5G18550 42.683 328 152 12 44 340 48 370 2.69e-80 255
MS.gene070535.t1 AT5G18550 39.175 97 48 3 267 352 47 143 7.84e-16 79.7
MS.gene070535.t1 AT5G16540 40.115 349 169 12 44 381 39 358 4.19e-78 246
MS.gene070535.t1 AT5G16540 43.038 79 44 1 264 341 35 113 1.87e-14 74.7
MS.gene070535.t1 AT5G16540 36.471 85 46 2 37 115 233 315 1.01e-13 72.8
MS.gene070535.t1 AT5G16540 40.115 349 169 12 44 381 18 337 4.40e-78 246
MS.gene070535.t1 AT5G16540 43.038 79 44 1 264 341 14 92 1.75e-14 74.7
MS.gene070535.t1 AT5G16540 36.471 85 46 2 37 115 212 294 1.18e-13 72.4
MS.gene070535.t1 AT3G06410 38.567 363 168 12 20 340 29 378 4.05e-76 244
MS.gene070535.t1 AT3G06410 33.333 120 69 2 224 341 16 126 3.05e-16 80.9
MS.gene070535.t1 AT1G04990 42.453 318 159 7 96 401 16 321 1.40e-75 238
MS.gene070535.t1 AT1G04990 40.909 88 51 1 74 160 165 252 1.33e-13 71.6
MS.gene070535.t1 AT5G18550 41.284 327 145 12 44 340 48 357 2.23e-73 237
MS.gene070535.t1 AT5G18550 39.175 97 48 3 267 352 47 143 6.18e-16 79.7
MS.gene070535.t1 AT5G16540 38.841 345 172 11 44 381 39 351 4.90e-73 233
MS.gene070535.t1 AT5G16540 43.038 79 44 1 264 341 35 113 1.72e-14 75.1
MS.gene070535.t1 AT5G16540 35.366 82 44 2 37 115 233 308 9.15e-12 66.6
MS.gene070535.t1 AT3G48440 38.838 327 158 13 44 342 107 419 1.45e-67 221
MS.gene070535.t1 AT3G48440 52.500 80 37 1 84 162 341 420 2.67e-20 93.2
MS.gene070535.t1 AT5G63260 37.658 316 178 9 42 342 96 407 1.41e-66 219
MS.gene070535.t1 AT1G04990 39.557 316 151 7 96 401 16 301 2.02e-66 214
MS.gene070535.t1 AT5G63260 37.048 332 174 10 42 342 96 423 3.36e-65 216
MS.gene070535.t1 AT2G47850 34.561 353 171 11 19 348 27 342 2.99e-61 205
MS.gene070535.t1 AT5G16540 40.214 281 131 10 44 316 18 269 1.31e-59 195
MS.gene070535.t1 AT5G16540 47.500 80 40 1 264 341 59 138 8.89e-20 89.0
MS.gene070535.t1 AT5G16540 43.038 79 44 1 264 341 14 92 1.06e-14 74.3
MS.gene070535.t1 AT3G12680 36.443 343 159 12 44 341 171 499 3.25e-56 194
MS.gene070535.t1 AT3G12680 43.023 86 38 2 41 115 414 499 4.00e-16 80.9
MS.gene070535.t1 AT2G47850 36.327 245 134 6 124 348 4 246 1.13e-42 153
MS.gene070535.t1 AT2G47850 49.398 83 41 1 79 160 157 239 7.27e-22 96.3
MS.gene070535.t1 AT2G47850 41.975 81 33 2 44 115 164 239 2.42e-15 77.4
MS.gene070535.t1 AT1G48195 46.753 77 39 1 266 340 4 80 3.55e-20 84.7
MS.gene070535.t1 AT1G48195 46.753 77 40 1 84 159 4 80 2.12e-17 77.0
MS.gene070535.t1 AT1G48195 48.000 75 35 1 44 114 6 80 1.41e-16 74.7
MS.gene070535.t1 AT1G29600 44.578 83 36 4 41 122 125 198 5.81e-15 75.9
MS.gene070535.t1 AT1G29600 44.578 83 36 4 41 122 119 192 6.96e-15 75.5

Find 112 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGTGCTATCCTTTCTTT+AGG 0.127413 5.4:+67279998 None:intergenic
TGCAGCACCTCTCCTGTCTT+TGG 0.215706 5.4:+67281088 None:intergenic
AGACCCAGTTCTCATGTAAT+AGG 0.260132 5.4:+67280898 None:intergenic
AGAACTGGGTCTTGCAAGTT+TGG 0.276971 5.4:-67280887 MS.gene070535:CDS
AGATTTCAGGTTACTCAATA+TGG 0.278926 5.4:-67282223 MS.gene070535:intron
TGGACAGTTGAAAGCCTTCT+TGG 0.292560 5.4:+67279500 None:intergenic
TCTGGTTGCTCAGGTCTATC+TGG 0.304316 5.4:+67280082 None:intergenic
AGCACCGGAACATGCAAATA+TGG 0.322651 5.4:-67280043 MS.gene070535:CDS
TTTGTGCTATCCTTTCTTTA+GGG 0.324288 5.4:+67279999 None:intergenic
TGCTCTTATTACAGAATCTA+TGG 0.326952 5.4:-67279638 MS.gene070535:CDS
GCAGCACCTCTCCTGTCTTT+GGG 0.333423 5.4:+67281089 None:intergenic
TTCGTATTGCAGAAGCTATT+CGG 0.340006 5.4:-67282580 MS.gene070535:intron
CCGAGAATGTCATATTTATC+TGG 0.351902 5.4:-67280728 MS.gene070535:CDS
ATCTATGGAGTATGCAAGTT+TGG 0.357289 5.4:-67279623 MS.gene070535:CDS
CCAGATAAATATGACATTCT+CGG 0.368337 5.4:+67280728 None:intergenic
CCACAACAGGCAGCTTCCTT+TGG 0.370576 5.4:-67280842 MS.gene070535:CDS
TCCACAACTGTTACTTCATC+AGG 0.377937 5.4:-67280788 MS.gene070535:CDS
GCATTATGCCTGCGCTGAGC+TGG 0.382644 5.4:-67280658 MS.gene070535:CDS
GAGGGAGGGGACGCCGCCAC+TGG 0.385507 5.4:+67280809 None:intergenic
CTATCCTTTCTTTAGGGTGG+TGG 0.386879 5.4:+67280005 None:intergenic
ATAAAACCAGTAGGCATTGC+AGG 0.387637 5.4:+67280178 None:intergenic
AAGACAGGAACATGTAAGTA+TGG 0.393613 5.4:-67281134 MS.gene070535:CDS
ACCGTCGTCCGAGTCTTTAC+AGG 0.393788 5.4:-67279363 MS.gene070535:CDS
TGTCCCTATTACATGAGAAC+TGG 0.394120 5.4:-67280902 MS.gene070535:CDS
CCCGTTGTCTTCAATACTTT+AGG 0.398288 5.4:-67281065 MS.gene070535:CDS
CTCAAATAATATACGCAGTC+AGG 0.416206 5.4:+67282482 None:intergenic
CTGACTGCGTATATTATTTG+AGG 0.418766 5.4:-67282481 MS.gene070535:CDS
AAAGCCTTCTTGGATTAGTA+AGG 0.427107 5.4:+67279510 None:intergenic
ATGAATCCGGCGGGAGAGAC+TGG 0.428639 5.4:-67280130 MS.gene070535:CDS
TATTTACAGTCTGGTTGCTC+AGG 0.430194 5.4:+67280073 None:intergenic
GCCTCAATCAATGCCTTATC+CGG 0.436673 5.4:-67282519 MS.gene070535:CDS
AATGCACTTACAGGTCTCAT+AGG 0.440267 5.4:+67279950 None:intergenic
CTCATAAAGTATTTACAGTC+TGG 0.442202 5.4:+67280064 None:intergenic
AAGAACTTCCTGAGAGAGTT+GGG 0.442954 5.4:-67282198 MS.gene070535:CDS
GCAGGAAACCCACCAGCATA+TGG 0.444203 5.4:+67280761 None:intergenic
TCAGGTTGCCCAACTCTCTC+AGG 0.445004 5.4:+67282190 None:intergenic
TTCTGAGAGATAGCCACAAC+TGG 0.446204 5.4:+67279578 None:intergenic
TTTAGGTCTTCCCATGCGTC+AGG 0.446654 5.4:-67281048 MS.gene070535:intron
GACCCAGTTCTCATGTAATA+GGG 0.459797 5.4:+67280899 None:intergenic
GGCATAATGCCTTGTGAAGA+AGG 0.459870 5.4:+67280671 None:intergenic
CAACAGGCAGCTTCCTTTGG+AGG 0.460678 5.4:-67280839 MS.gene070535:CDS
AATAAGCATACCTCACAATC+AGG 0.465727 5.4:+67282172 None:intergenic
AGATCCATATTTGCATGTTC+CGG 0.472187 5.4:+67280039 None:intergenic
CCATCTGGTGATAACATTGA+AGG 0.474193 5.4:-67283199 MS.gene070535:intron
AGCTTGTTTAGATGAATCTT+CGG 0.476106 5.4:+67279409 None:intergenic
TGCGTATATTATTTGAGGAC+TGG 0.478797 5.4:-67282476 MS.gene070535:CDS
TCACCAGGTCGATCCGGATA+AGG 0.480066 5.4:+67282506 None:intergenic
GGACTGGAATGTGTGGTTAC+GGG 0.482004 5.4:-67282460 MS.gene070535:CDS
CAAGTTTCATCATCCACAAC+AGG 0.488215 5.4:-67280855 MS.gene070535:CDS
TCAGGTTCACCAGGTCGATC+CGG 0.491203 5.4:+67282500 None:intergenic
AATGTCATATTTATCTGGAC+AGG 0.494113 5.4:-67280723 MS.gene070535:CDS
ATTAACCCTGCAATGCCTAC+TGG 0.496129 5.4:-67280184 MS.gene070535:CDS
AATGCTGGTTCTAATCCATC+TGG 0.496458 5.4:-67283214 MS.gene070535:CDS
ATTACAGGTGAAATGTTAGC+AGG 0.497677 5.4:+67282416 None:intergenic
CCTAAAGTATTGAAGACAAC+GGG 0.502456 5.4:+67281065 None:intergenic
CCAAAGGAAGCTGCCTGTTG+TGG 0.502820 5.4:+67280842 None:intergenic
ATGGAGATGTCTCGGTTGGT+TGG 0.505736 5.4:+67279480 None:intergenic
GGCGGGAGAGACTGGTGGAC+AGG 0.513029 5.4:-67280122 MS.gene070535:CDS
GTGCTATCCTTTCTTTAGGG+TGG 0.514914 5.4:+67280002 None:intergenic
AGGAGGCACATAAGATTGAA+TGG 0.519059 5.4:+67280700 None:intergenic
GAAGAACTTCCTGAGAGAGT+TGG 0.521193 5.4:-67282199 MS.gene070535:CDS
AGGACTGGAATGTGTGGTTA+CGG 0.521390 5.4:-67282461 MS.gene070535:CDS
CCTTCAATGTTATCACCAGA+TGG 0.522380 5.4:+67283199 None:intergenic
AGTAACAGTTGTGGAGGGAG+GGG 0.529224 5.4:+67280796 None:intergenic
TTCGATGGAGATGTCTCGGT+TGG 0.530171 5.4:+67279476 None:intergenic
AATATCATCATCCCAAAGAC+AGG 0.531632 5.4:-67281100 MS.gene070535:CDS
TTGTCAGTTGATTGTTTCGA+TGG 0.531763 5.4:+67279461 None:intergenic
ATGCTGGTGGGTTTCCTGCA+TGG 0.533086 5.4:-67280757 MS.gene070535:CDS
TGTCTACGACTACATGAATC+CGG 0.541765 5.4:-67280143 MS.gene070535:CDS
TATACGCAGTCAGGTTCACC+AGG 0.548463 5.4:+67282491 None:intergenic
TGTAAATACTTTATGAGCAC+CGG 0.550440 5.4:-67280058 MS.gene070535:CDS
AGTTCCACCACCCTAAAGAA+AGG 0.558473 5.4:-67280009 MS.gene070535:CDS
TCCTGTAAAGACTCGGACGA+CGG 0.558630 5.4:+67279362 None:intergenic
GAAGTAACAGTTGTGGAGGG+AGG 0.561560 5.4:+67280794 None:intergenic
AAGTAACAGTTGTGGAGGGA+GGG 0.565711 5.4:+67280795 None:intergenic
TTGTTTCGATGGAGATGTCT+CGG 0.567749 5.4:+67279472 None:intergenic
CAAATTTGATCATCCAGTTG+TGG 0.569323 5.4:-67279591 MS.gene070535:CDS
GGATGTACAAACCTGACGCA+TGG 0.570494 5.4:+67281037 None:intergenic
TCCGGATAAGGCATTGATTG+AGG 0.571672 5.4:+67282518 None:intergenic
TAGTTGCTCCAGCTCAGCGC+AGG 0.575573 5.4:+67280650 None:intergenic
CTCTCCTTACTAATCCAAGA+AGG 0.580301 5.4:-67279514 MS.gene070535:CDS
GCTGAGCTGGAGCAACTACA+TGG 0.582157 5.4:-67280645 MS.gene070535:intron
GGATGATCAAATTTGCATGT+TGG 0.583840 5.4:+67279599 None:intergenic
GATGTACAAACCTGACGCAT+GGG 0.586804 5.4:+67281038 None:intergenic
ACATTATCAATTAATCCACT+TGG 0.589067 5.4:-67279977 MS.gene070535:CDS
ACCTGATGAAGTAACAGTTG+TGG 0.598830 5.4:+67280787 None:intergenic
GTCCCTATTACATGAGAACT+GGG 0.603851 5.4:-67280901 MS.gene070535:CDS
AATCCGGCGGGAGAGACTGG+TGG 0.604528 5.4:-67280127 MS.gene070535:CDS
TGGAGGAGCTTATCCAGTGG+CGG 0.605551 5.4:-67280822 MS.gene070535:CDS
ATGCCTTATCCGGATCGACC+TGG 0.607838 5.4:-67282509 MS.gene070535:CDS
TGATGAAGTAACAGTTGTGG+AGG 0.607944 5.4:+67280790 None:intergenic
GAATACTGATAGAGTAGGCG+AGG 0.609226 5.4:+67279544 None:intergenic
ATTCTCGGCATTGACCATGC+AGG 0.609928 5.4:+67280743 None:intergenic
GCATCGAATACTGATAGAGT+AGG 0.610445 5.4:+67279539 None:intergenic
GTGGCTATCTCTCAGAACTA+CGG 0.612160 5.4:-67279572 MS.gene070535:CDS
TACGACTACATGAATCCGGC+GGG 0.613456 5.4:-67280139 MS.gene070535:CDS
TGTCCACCAGTCTCTCCCGC+CGG 0.614965 5.4:+67280124 None:intergenic
CACTGGATAAGCTCCTCCAA+AGG 0.616300 5.4:+67280826 None:intergenic
TTAGATCCAATAAAACCAGT+AGG 0.616664 5.4:+67280169 None:intergenic
AGTTTATTCCTGTAAAGACT+CGG 0.621015 5.4:+67279355 None:intergenic
TAAAACCAGTAGGCATTGCA+GGG 0.641286 5.4:+67280179 None:intergenic
CTTTGGAGGAGCTTATCCAG+TGG 0.642465 5.4:-67280825 MS.gene070535:CDS
TTACAGGTGAAATGTTAGCA+GGG 0.642989 5.4:+67282417 None:intergenic
AGTTGGGCAACCTGATTGTG+AGG 0.647405 5.4:-67282182 MS.gene070535:intron
ACCTAAAGTATTGAAGACAA+CGG 0.650733 5.4:+67281064 None:intergenic
TATTTGAGGACTGGAATGTG+TGG 0.661824 5.4:-67282467 MS.gene070535:CDS
CTACGACTACATGAATCCGG+CGG 0.676232 5.4:-67280140 MS.gene070535:CDS
AATACTGATAGAGTAGGCGA+GGG 0.679258 5.4:+67279545 None:intergenic
TGTTAGCAGGGTGATTATAG+CGG 0.683660 5.4:+67282429 None:intergenic
GATGAAGTAACAGTTGTGGA+GGG 0.690790 5.4:+67280791 None:intergenic
CATCATCCCAAAGACAGGAG+AGG 0.694632 5.4:-67281095 MS.gene070535:CDS
GGTCTCATAGGAAGACCAAG+TGG 0.702644 5.4:+67279962 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGTATCTTAAAATATTA+GGG + chr5.4:67282874-67282893 None:intergenic 10.0%
!!! ATAGTTTATAGATTATTTTT+TGG + chr5.4:67282805-67282824 None:intergenic 10.0%
!!! TAAAAGTATCTTAAAATATT+AGG + chr5.4:67282875-67282894 None:intergenic 10.0%
!!! TTATCTATTTGTTATATAAA+TGG + chr5.4:67281281-67281300 None:intergenic 10.0%
!! ACAAAAAACTAATAAATGTT+TGG + chr5.4:67280927-67280946 None:intergenic 15.0%
!! TACTAATATTAAATTCTGTT+TGG + chr5.4:67281404-67281423 None:intergenic 15.0%
!!! TTATTAGTTTTTTGTTTTGA+TGG - chr5.4:67280932-67280951 MS.gene070535:intron 15.0%
!!! TTTTTTTCACAATAAAAAGT+TGG + chr5.4:67282704-67282723 None:intergenic 15.0%
!! AAAACTAATAAATGTTTGGA+AGG + chr5.4:67280923-67280942 None:intergenic 20.0%
!! ATCTAGTAAATAAATTCTAC+AGG + chr5.4:67280972-67280991 None:intergenic 20.0%
!!! ATCTTGTTAAATTTTCTCAT+TGG - chr5.4:67280310-67280329 MS.gene070535:intron 20.0%
!!! CTATTTTATTTGTCGAAAAA+GGG - chr5.4:67282388-67282407 MS.gene070535:intron 20.0%
! AATTAGCAAGTATTTCAAAC+AGG + chr5.4:67280717-67280736 None:intergenic 25.0%
! AATTAGCTGAAAACATCTTT+AGG - chr5.4:67281348-67281367 MS.gene070535:intron 25.0%
! ACAACTTAATTAAGCGTTTA+TGG - chr5.4:67281220-67281239 MS.gene070535:intron 25.0%
! ACATTATCAATTAATCCACT+TGG - chr5.4:67282622-67282641 MS.gene070535:intron 25.0%
! AGTATCTTAAAATATTAGGG+AGG + chr5.4:67282871-67282890 None:intergenic 25.0%
! CAATAAAAAGTTGGAACAAA+CGG + chr5.4:67282695-67282714 None:intergenic 25.0%
! CAGAAAGAAAAATCATGAAA+AGG + chr5.4:67280228-67280247 None:intergenic 25.0%
! GGTTCTATTATTCGTAATTT+AGG - chr5.4:67280331-67280350 MS.gene070535:intron 25.0%
! TTAAGAGTGAATTCAAGAAT+AGG - chr5.4:67280547-67280566 MS.gene070535:intron 25.0%
! TTATTACTGCTTGAATTTGT+TGG - chr5.4:67279950-67279969 MS.gene070535:intron 25.0%
! TTGCTTTATGATGCAATAAA+GGG - chr5.4:67279826-67279845 MS.gene070535:intron 25.0%
! TTTGCTTTATGATGCAATAA+AGG - chr5.4:67279825-67279844 MS.gene070535:intron 25.0%
!! ACTTAATTTTTGTCCTTTTG+TGG - chr5.4:67280652-67280671 MS.gene070535:CDS 25.0%
!! CATTTTCTTCTTAATGCTTT+GGG - chr5.4:67282668-67282687 MS.gene070535:intron 25.0%
!! CTTTTCATGATTTTTCTTTC+TGG - chr5.4:67280226-67280245 MS.gene070535:intron 25.0%
!! GAATTTGTTCAAGGAAAAAA+AGG + chr5.4:67280573-67280592 None:intergenic 25.0%
!! GTAAAAAGTGAATTTGTTCA+AGG + chr5.4:67280582-67280601 None:intergenic 25.0%
!! TTGAAAACTTGTCTATTTTC+TGG + chr5.4:67279364-67279383 None:intergenic 25.0%
!!! AATCTACAATTGTTGCTTTT+AGG - chr5.4:67281663-67281682 MS.gene070535:intron 25.0%
!!! GCTATTTTATTTGTCGAAAA+AGG - chr5.4:67282387-67282406 MS.gene070535:intron 25.0%
!!! TGATGATGTGTTTCTATTTT+TGG - chr5.4:67279568-67279587 MS.gene070535:CDS 25.0%
AATGTCATATTTATCTGGAC+AGG - chr5.4:67281876-67281895 MS.gene070535:intron 30.0%
ACAGTCCAATACAATTAAAC+TGG + chr5.4:67279913-67279932 None:intergenic 30.0%
AGATCTCTCTATGACAATAA+TGG - chr5.4:67280988-67281007 MS.gene070535:intron 30.0%
ATAAATGAAGTCGTAGGATA+CGG - chr5.4:67280839-67280858 MS.gene070535:CDS 30.0%
CACAAAGTTTACTCTTCTAA+TGG - chr5.4:67281611-67281630 MS.gene070535:intron 30.0%
CATGAGCACATAATATATGT+AGG - chr5.4:67280741-67280760 MS.gene070535:CDS 30.0%
CATTAGAAGAGTAAACTTTG+TGG + chr5.4:67281613-67281632 None:intergenic 30.0%
CATTCAACCCCTTTAATAAT+AGG - chr5.4:67280686-67280705 MS.gene070535:CDS 30.0%
CCAGATAAATATGACATTCT+CGG + chr5.4:67281874-67281893 None:intergenic 30.0%
CTATTATTAAAGGGGTTGAA+TGG + chr5.4:67280688-67280707 None:intergenic 30.0%
CTCATACTTCATTAGATTTC+AGG - chr5.4:67280363-67280382 MS.gene070535:intron 30.0%
CTGATCCAGTTTAATTGTAT+TGG - chr5.4:67279905-67279924 MS.gene070535:intron 30.0%
CTTCTTCTTAAATTACGCTA+TGG + chr5.4:67281035-67281054 None:intergenic 30.0%
GGACAAAAATTAAGTGCAAA+AGG + chr5.4:67280647-67280666 None:intergenic 30.0%
GTACTAGAAATATCAAGTTC+AGG - chr5.4:67281093-67281112 MS.gene070535:CDS 30.0%
TAAGAAGAAAATGCACTTAC+AGG + chr5.4:67282661-67282680 None:intergenic 30.0%
TATCCTACGACTTCATTTAT+TGG + chr5.4:67280839-67280858 None:intergenic 30.0%
TGATTCTATGCAAGTAAACA+TGG + chr5.4:67279759-67279778 None:intergenic 30.0%
TGCTCTTATTACAGAATCTA+TGG - chr5.4:67282961-67282980 MS.gene070535:intron 30.0%
TGTAAATACTTTATGAGCAC+CGG - chr5.4:67282541-67282560 MS.gene070535:CDS 30.0%
TTAGATCCAATAAAACCAGT+AGG + chr5.4:67282433-67282452 None:intergenic 30.0%
TTATTATACTTGATCGCACA+TGG - chr5.4:67279783-67279802 MS.gene070535:intron 30.0%
TTTGTGCTATCCTTTCTTTA+GGG + chr5.4:67282603-67282622 None:intergenic 30.0%
! AAATAAAGCACTTGGTTCAA+AGG + chr5.4:67281587-67281606 None:intergenic 30.0%
! AATAAAGCACTTGGTTCAAA+GGG + chr5.4:67281586-67281605 None:intergenic 30.0%
! AGCTTGTTTAGATGAATCTT+CGG + chr5.4:67283193-67283212 None:intergenic 30.0%
! ATATACTGATTAACCTGGTA+TGG - chr5.4:67282043-67282062 MS.gene070535:intron 30.0%
! ATTCTGTTTGGAATAGCTTA+TGG + chr5.4:67281392-67281411 None:intergenic 30.0%
! CAAAAGATGATTTTCCACAT+TGG + chr5.4:67280897-67280916 None:intergenic 30.0%
! CGCTTAATTAAGTTGTCTAT+AGG + chr5.4:67281216-67281235 None:intergenic 30.0%
! CTCATAAAGTATTTACAGTC+TGG + chr5.4:67282538-67282557 None:intergenic 30.0%
! GCATTTTCTTCTTAATGCTT+TGG - chr5.4:67282667-67282686 MS.gene070535:intron 30.0%
! GTTCTGTTTTCGATGTTAAT+CGG + chr5.4:67282222-67282241 None:intergenic 30.0%
! TGATTTTCTGATTCCTATGT+TGG - chr5.4:67282916-67282935 MS.gene070535:intron 30.0%
! TGTGGAAAAAATAAAGCACT+TGG + chr5.4:67281595-67281614 None:intergenic 30.0%
! TGTTCTGATCATCATTGTTT+TGG - chr5.4:67279500-67279519 MS.gene070535:CDS 30.0%
! TTGCAGTATTTTCTTAAGAC+AGG - chr5.4:67281450-67281469 MS.gene070535:intron 30.0%
! TTTGGAATAGCTTATGGAAA+CGG + chr5.4:67281386-67281405 None:intergenic 30.0%
!! ACCTAAAGTATTGAAGACAA+CGG + chr5.4:67281538-67281557 None:intergenic 30.0%
!! AGATTTCAGGTTACTCAATA+TGG - chr5.4:67280376-67280395 MS.gene070535:intron 30.0%
!! CATTGATTTCCAATCACATT+TGG - chr5.4:67282186-67282205 MS.gene070535:CDS 30.0%
!! TCTCTGAAATATTTAGCCTA+GGG - chr5.4:67280793-67280812 MS.gene070535:CDS 30.0%
!! TTAACTTGTGTGAGTGAAAA+AGG - chr5.4:67279698-67279717 MS.gene070535:intron 30.0%
!! TTCTCTGAAATATTTAGCCT+AGG - chr5.4:67280792-67280811 MS.gene070535:CDS 30.0%
!!! TGTGAGGTATGCTTATTTTT+TGG - chr5.4:67280433-67280452 MS.gene070535:intron 30.0%
AAAAGAAAGAGCTCCATTAC+AGG + chr5.4:67280201-67280220 None:intergenic 35.0%
AAGACAGGAACATGTAAGTA+TGG - chr5.4:67281465-67281484 MS.gene070535:intron 35.0%
AATAAGCATACCTCACAATC+AGG + chr5.4:67280430-67280449 None:intergenic 35.0%
AATAAGTTATGCTGCCAATG+TGG - chr5.4:67280880-67280899 MS.gene070535:CDS 35.0%
AATATCATCATCCCAAAGAC+AGG - chr5.4:67281499-67281518 MS.gene070535:intron 35.0%
ACACCAATAAATGAAGTCGT+AGG - chr5.4:67280833-67280852 MS.gene070535:CDS 35.0%
ACATAGCCAAACATCCTAAA+AGG + chr5.4:67282276-67282295 None:intergenic 35.0%
ACCAACAACTTTCATTGCAT+TGG + chr5.4:67281184-67281203 None:intergenic 35.0%
AGATCCATATTTGCATGTTC+CGG + chr5.4:67282563-67282582 None:intergenic 35.0%
AGGCGAAGCCTATTATTAAA+GGG + chr5.4:67280697-67280716 None:intergenic 35.0%
ATCTATGGAGTATGCAAGTT+TGG - chr5.4:67282976-67282995 MS.gene070535:intron 35.0%
ATTACAGGTGAAATGTTAGC+AGG + chr5.4:67280186-67280205 None:intergenic 35.0%
ATTCTACAGGACACACTATA+AGG + chr5.4:67280959-67280978 None:intergenic 35.0%
CAAATTTGATCATCCAGTTG+TGG - chr5.4:67283008-67283027 MS.gene070535:intron 35.0%
CAATGTTGTTGTATTGTGTG+AGG - chr5.4:67279648-67279667 MS.gene070535:CDS 35.0%
CCGAGAATGTCATATTTATC+TGG - chr5.4:67281871-67281890 MS.gene070535:intron 35.0%
CTCAAATAATATACGCAGTC+AGG + chr5.4:67280120-67280139 None:intergenic 35.0%
CTGACTGCGTATATTATTTG+AGG - chr5.4:67280118-67280137 MS.gene070535:CDS 35.0%
GCGACATCTAGTAGTAAAAA+TGG + chr5.4:67282135-67282154 None:intergenic 35.0%
GGATGATCAAATTTGCATGT+TGG + chr5.4:67283003-67283022 None:intergenic 35.0%
GTTTGTGCTATCCTTTCTTT+AGG + chr5.4:67282604-67282623 None:intergenic 35.0%
TAGACATGAAGCAGTTTCTT+AGG - chr5.4:67280250-67280269 MS.gene070535:intron 35.0%
TCCAATGCAATGAAAGTTGT+TGG - chr5.4:67281180-67281199 MS.gene070535:intron 35.0%
TGCGTATATTATTTGAGGAC+TGG - chr5.4:67280123-67280142 MS.gene070535:CDS 35.0%
TGCTAACATTTCACCTGTAA+TGG - chr5.4:67280185-67280204 MS.gene070535:CDS 35.0%
TGGAAATAAGAGACCACAAA+AGG + chr5.4:67280668-67280687 None:intergenic 35.0%
TTACAGGTGAAATGTTAGCA+GGG + chr5.4:67280185-67280204 None:intergenic 35.0%
TTAGCTAAACGAATACACGA+AGG - chr5.4:67282086-67282105 MS.gene070535:intron 35.0%
TTCGTATTGCAGAAGCTATT+CGG - chr5.4:67280019-67280038 MS.gene070535:CDS 35.0%
TTCTGCAATACGAATCACAA+AGG + chr5.4:67280013-67280032 None:intergenic 35.0%
TTGTCAGTTGATTGTTTCGA+TGG + chr5.4:67283141-67283160 None:intergenic 35.0%
TTTCATGAACATGTAGTCTG+TGG - chr5.4:67280280-67280299 MS.gene070535:intron 35.0%
TTTCCTAAACAAGACAAGAC+TGG + chr5.4:67282244-67282263 None:intergenic 35.0%
! ACTGTTTTCAAAAGCTATCC+TGG - chr5.4:67281313-67281332 MS.gene070535:intron 35.0%
! CACACATATACTGATTAACC+TGG - chr5.4:67282038-67282057 MS.gene070535:intron 35.0%
! GACAGTTTTTAAACCATACC+AGG + chr5.4:67282059-67282078 None:intergenic 35.0%
!! AAAGCCTTCTTGGATTAGTA+AGG + chr5.4:67283092-67283111 None:intergenic 35.0%
!! AGACAAGTTTTCAAGAATGC+TGG - chr5.4:67279370-67279389 MS.gene070535:CDS 35.0%
!! CCTAAAGTATTGAAGACAAC+GGG + chr5.4:67281537-67281556 None:intergenic 35.0%
!! GGAAATATTCCTAGCCTTTT+AGG - chr5.4:67282259-67282278 MS.gene070535:intron 35.0%
!!! CTGATCATCATTGTTTTGGT+TGG - chr5.4:67279504-67279523 MS.gene070535:CDS 35.0%
!!! TTTCTTTCCCTTGTTTTGAG+CGG - chr5.4:67280482-67280501 MS.gene070535:intron 35.0%
AAGAACTTCCTGAGAGAGTT+GGG - chr5.4:67280401-67280420 MS.gene070535:intron 40.0%
AATACTGATAGAGTAGGCGA+GGG + chr5.4:67283057-67283076 None:intergenic 40.0%
AATGCACTTACAGGTCTCAT+AGG + chr5.4:67282652-67282671 None:intergenic 40.0%
ACCTGATGAAGTAACAGTTG+TGG + chr5.4:67281815-67281834 None:intergenic 40.0%
ACTGAGACTATGCTCATACA+AGG - chr5.4:67280765-67280784 MS.gene070535:CDS 40.0%
AGACCCAGTTCTCATGTAAT+AGG + chr5.4:67281704-67281723 None:intergenic 40.0%
ATTGTATTGGACTGTGAGTG+TGG - chr5.4:67279918-67279937 MS.gene070535:intron 40.0%
ATTTGAGCGCCAAATGTGAT+TGG + chr5.4:67282198-67282217 None:intergenic 40.0%
CAAGTTTCATCATCCACAAC+AGG - chr5.4:67281744-67281763 MS.gene070535:intron 40.0%
CAGGCGAAGCCTATTATTAA+AGG + chr5.4:67280698-67280717 None:intergenic 40.0%
CCATCTGGTGATAACATTGA+AGG - chr5.4:67279400-67279419 MS.gene070535:CDS 40.0%
CCCGTTGTCTTCAATACTTT+AGG - chr5.4:67281534-67281553 MS.gene070535:intron 40.0%
CCTTCAATGTTATCACCAGA+TGG + chr5.4:67279403-67279422 None:intergenic 40.0%
CCTTGTGAAGAAGGCAAAAA+AGG + chr5.4:67281922-67281941 None:intergenic 40.0%
CTAACAATGAACATGTCCCT+AGG + chr5.4:67280812-67280831 None:intergenic 40.0%
CTAATTTCCATAAGCTCTCC+AGG + chr5.4:67281334-67281353 None:intergenic 40.0%
CTCTCCTTACTAATCCAAGA+AGG - chr5.4:67283085-67283104 MS.gene070535:intron 40.0%
CTGAGACTATGCTCATACAA+GGG - chr5.4:67280766-67280785 MS.gene070535:CDS 40.0%
GACCCAGTTCTCATGTAATA+GGG + chr5.4:67281703-67281722 None:intergenic 40.0%
GATGAAGTAACAGTTGTGGA+GGG + chr5.4:67281811-67281830 None:intergenic 40.0%
GCATAAACCACATCCACATT+CGG + chr5.4:67280520-67280539 None:intergenic 40.0%
GCATCGAATACTGATAGAGT+AGG + chr5.4:67283063-67283082 None:intergenic 40.0%
GGCGAAGCCTATTATTAAAG+GGG + chr5.4:67280696-67280715 None:intergenic 40.0%
GTCCCTATTACATGAGAACT+GGG - chr5.4:67281698-67281717 MS.gene070535:intron 40.0%
TACATGCATTCAGTGGTTAC+TGG - chr5.4:67282319-67282338 MS.gene070535:intron 40.0%
TATTTACAGTCTGGTTGCTC+AGG + chr5.4:67282529-67282548 None:intergenic 40.0%
TATTTGAGGACTGGAATGTG+TGG - chr5.4:67280132-67280151 MS.gene070535:CDS 40.0%
TCGTAACTACATGCATTCAG+TGG - chr5.4:67282312-67282331 MS.gene070535:intron 40.0%
TGATGAAGTAACAGTTGTGG+AGG + chr5.4:67281812-67281831 None:intergenic 40.0%
TGTCCCTATTACATGAGAAC+TGG - chr5.4:67281697-67281716 MS.gene070535:intron 40.0%
TGTCTACGACTACATGAATC+CGG - chr5.4:67282456-67282475 MS.gene070535:CDS 40.0%
TGTGAAGAAGGCAAAAAAGG+AGG + chr5.4:67281919-67281938 None:intergenic 40.0%
TGTTAGCAGGGTGATTATAG+CGG + chr5.4:67280173-67280192 None:intergenic 40.0%
TTGTTTCGATGGAGATGTCT+CGG + chr5.4:67283130-67283149 None:intergenic 40.0%
! AGGAGGCACATAAGATTGAA+TGG + chr5.4:67281902-67281921 None:intergenic 40.0%
! ATAAAACCAGTAGGCATTGC+AGG + chr5.4:67282424-67282443 None:intergenic 40.0%
! TAAAACCAGTAGGCATTGCA+GGG + chr5.4:67282423-67282442 None:intergenic 40.0%
! TCATCAGGTTTTCCATATGC+TGG - chr5.4:67281826-67281845 MS.gene070535:intron 40.0%
! TCCACAACTGTTACTTCATC+AGG - chr5.4:67281811-67281830 MS.gene070535:intron 40.0%
!! AATGCTGGTTCTAATCCATC+TGG - chr5.4:67279385-67279404 MS.gene070535:CDS 40.0%
!! GAACCAGTCTTGTCTTGTTT+AGG - chr5.4:67282238-67282257 MS.gene070535:intron 40.0%
!!! CCTTTTTTGCCTTCTTCACA+AGG - chr5.4:67281919-67281938 MS.gene070535:intron 40.0%
!!! GCAATGCCTACTGGTTTTAT+TGG - chr5.4:67282424-67282443 MS.gene070535:CDS 40.0%
!!! TCCTAGCCTTTTAGGATGTT+TGG - chr5.4:67282267-67282286 MS.gene070535:intron 40.0%
AAGCTATCCTGGAGAGCTTA+TGG - chr5.4:67281324-67281343 MS.gene070535:intron 45.0%
AAGTAACAGTTGTGGAGGGA+GGG + chr5.4:67281807-67281826 None:intergenic 45.0%
AAGTCGTAGGATACGGAATG+AGG - chr5.4:67280846-67280865 MS.gene070535:CDS 45.0%
AGAACTGGGTCTTGCAAGTT+TGG - chr5.4:67281712-67281731 MS.gene070535:intron 45.0%
AGGACTGGAATGTGTGGTTA+CGG - chr5.4:67280138-67280157 MS.gene070535:CDS 45.0%
AGTTCCACCACCCTAAAGAA+AGG - chr5.4:67282590-67282609 MS.gene070535:intron 45.0%
ATTAACCCTGCAATGCCTAC+TGG - chr5.4:67282415-67282434 MS.gene070535:intron 45.0%
CATGAAACCGAATGTGGATG+TGG - chr5.4:67280510-67280529 MS.gene070535:intron 45.0%
GAAGAACTTCCTGAGAGAGT+TGG - chr5.4:67280400-67280419 MS.gene070535:intron 45.0%
GAATACTGATAGAGTAGGCG+AGG + chr5.4:67283058-67283077 None:intergenic 45.0%
GATGTACAAACCTGACGCAT+GGG + chr5.4:67281564-67281583 None:intergenic 45.0%
GCCAAACATCCTAAAAGGCT+AGG + chr5.4:67282271-67282290 None:intergenic 45.0%
GCCTCAATCAATGCCTTATC+CGG - chr5.4:67280080-67280099 MS.gene070535:CDS 45.0%
GGCATAATGCCTTGTGAAGA+AGG + chr5.4:67281931-67281950 None:intergenic 45.0%
GTGCTTCATGAAACCGAATG+TGG - chr5.4:67280504-67280523 MS.gene070535:intron 45.0%
GTGGCTATCTCTCAGAACTA+CGG - chr5.4:67283027-67283046 MS.gene070535:intron 45.0%
TGGACAGTTGAAAGCCTTCT+TGG + chr5.4:67283102-67283121 None:intergenic 45.0%
! AGCACCGGAACATGCAAATA+TGG - chr5.4:67282556-67282575 MS.gene070535:CDS 45.0%
! CAGGTTTTCCATATGCTGGT+GGG - chr5.4:67281830-67281849 MS.gene070535:intron 45.0%
! GTGCTATCCTTTCTTTAGGG+TGG + chr5.4:67282600-67282619 None:intergenic 45.0%
! TCAGGTTTTCCATATGCTGG+TGG - chr5.4:67281829-67281848 MS.gene070535:intron 45.0%
! TCCTATGTTGGTTGTCTGCA+GGG - chr5.4:67282928-67282947 MS.gene070535:intron 45.0%
! TTCCTATGTTGGTTGTCTGC+AGG - chr5.4:67282927-67282946 MS.gene070535:intron 45.0%
! TTCTGAGAGATAGCCACAAC+TGG + chr5.4:67283024-67283043 None:intergenic 45.0%
!! ATGAAGCACCGCTCAAAACA+AGG + chr5.4:67280493-67280512 None:intergenic 45.0%
!! CTATCCTTTCTTTAGGGTGG+TGG + chr5.4:67282597-67282616 None:intergenic 45.0%
!! TCCGGATAAGGCATTGATTG+AGG + chr5.4:67280084-67280103 None:intergenic 45.0%
!! TGAAGCACCGCTCAAAACAA+GGG + chr5.4:67280492-67280511 None:intergenic 45.0%
AGTAACAGTTGTGGAGGGAG+GGG + chr5.4:67281806-67281825 None:intergenic 50.0%
AGTTGGGCAACCTGATTGTG+AGG - chr5.4:67280417-67280436 MS.gene070535:intron 50.0%
ATGGAGATGTCTCGGTTGGT+TGG + chr5.4:67283122-67283141 None:intergenic 50.0%
CACTGGATAAGCTCCTCCAA+AGG + chr5.4:67281776-67281795 None:intergenic 50.0%
CATCATCCCAAAGACAGGAG+AGG - chr5.4:67281504-67281523 MS.gene070535:intron 50.0%
CTACGACTACATGAATCCGG+CGG - chr5.4:67282459-67282478 MS.gene070535:CDS 50.0%
GAAGTAACAGTTGTGGAGGG+AGG + chr5.4:67281808-67281827 None:intergenic 50.0%
GGACTGGAATGTGTGGTTAC+GGG - chr5.4:67280139-67280158 MS.gene070535:CDS 50.0%
GGATGTACAAACCTGACGCA+TGG + chr5.4:67281565-67281584 None:intergenic 50.0%
GGTCTCATAGGAAGACCAAG+TGG + chr5.4:67282640-67282659 None:intergenic 50.0%
TACGACTACATGAATCCGGC+GGG - chr5.4:67282460-67282479 MS.gene070535:CDS 50.0%
TATACGCAGTCAGGTTCACC+AGG + chr5.4:67280111-67280130 None:intergenic 50.0%
TCCCTGCAGACAACCAACAT+AGG + chr5.4:67282932-67282951 None:intergenic 50.0%
TCCTGTAAAGACTCGGACGA+CGG + chr5.4:67283240-67283259 None:intergenic 50.0%
TCTGGTTGCTCAGGTCTATC+TGG + chr5.4:67282520-67282539 None:intergenic 50.0%
TTCGATGGAGATGTCTCGGT+TGG + chr5.4:67283126-67283145 None:intergenic 50.0%
TTTAGGTCTTCCCATGCGTC+AGG - chr5.4:67281551-67281570 MS.gene070535:intron 50.0%
! CTTTGGAGGAGCTTATCCAG+TGG - chr5.4:67281774-67281793 MS.gene070535:intron 50.0%
!! ATTCTCGGCATTGACCATGC+AGG + chr5.4:67281859-67281878 None:intergenic 50.0%
ACCGTCGTCCGAGTCTTTAC+AGG - chr5.4:67283236-67283255 MS.gene070535:CDS 55.0%
ATGCCTTATCCGGATCGACC+TGG - chr5.4:67280090-67280109 MS.gene070535:CDS 55.0%
CAACAGGCAGCTTCCTTTGG+AGG - chr5.4:67281760-67281779 MS.gene070535:intron 55.0%
CCAAAGGAAGCTGCCTGTTG+TGG + chr5.4:67281760-67281779 None:intergenic 55.0%
CCACAACAGGCAGCTTCCTT+TGG - chr5.4:67281757-67281776 MS.gene070535:intron 55.0%
GCAGCACCTCTCCTGTCTTT+GGG + chr5.4:67281513-67281532 None:intergenic 55.0%
GCAGGAAACCCACCAGCATA+TGG + chr5.4:67281841-67281860 None:intergenic 55.0%
GCTGAGCTGGAGCAACTACA+TGG - chr5.4:67281954-67281973 MS.gene070535:intron 55.0%
TCACCAGGTCGATCCGGATA+AGG + chr5.4:67280096-67280115 None:intergenic 55.0%
TCAGGTTCACCAGGTCGATC+CGG + chr5.4:67280102-67280121 None:intergenic 55.0%
TGCAGCACCTCTCCTGTCTT+TGG + chr5.4:67281514-67281533 None:intergenic 55.0%
TGGAGGAGCTTATCCAGTGG+CGG - chr5.4:67281777-67281796 MS.gene070535:intron 55.0%
! TCAGGTTGCCCAACTCTCTC+AGG + chr5.4:67280412-67280431 None:intergenic 55.0%
!! ATGCTGGTGGGTTTCCTGCA+TGG - chr5.4:67281842-67281861 MS.gene070535:intron 55.0%
ATGAATCCGGCGGGAGAGAC+TGG - chr5.4:67282469-67282488 MS.gene070535:CDS 60.0%
GCATTATGCCTGCGCTGAGC+TGG - chr5.4:67281941-67281960 MS.gene070535:intron 60.0%
TAGTTGCTCCAGCTCAGCGC+AGG + chr5.4:67281952-67281971 None:intergenic 60.0%
AATCCGGCGGGAGAGACTGG+TGG - chr5.4:67282472-67282491 MS.gene070535:CDS 65.0%
TGTCCACCAGTCTCTCCCGC+CGG + chr5.4:67282478-67282497 None:intergenic 65.0%
! GGCGGGAGAGACTGGTGGAC+AGG - chr5.4:67282477-67282496 MS.gene070535:CDS 70.0%
! GAGGGAGGGGACGCCGCCAC+TGG + chr5.4:67281793-67281812 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 67279358 67283263 67279358 ID=MS.gene070535
chr5.4 mRNA 67279358 67283263 67279358 ID=MS.gene070535.t1;Parent=MS.gene070535
chr5.4 exon 67283200 67283263 67283200 ID=MS.gene070535.t1.exon1;Parent=MS.gene070535.t1
chr5.4 CDS 67283200 67283263 67283200 ID=cds.MS.gene070535.t1;Parent=MS.gene070535.t1
chr5.4 exon 67282421 67282590 67282421 ID=MS.gene070535.t1.exon2;Parent=MS.gene070535.t1
chr5.4 CDS 67282421 67282590 67282421 ID=cds.MS.gene070535.t1;Parent=MS.gene070535.t1
chr5.4 exon 67282183 67282236 67282183 ID=MS.gene070535.t1.exon3;Parent=MS.gene070535.t1
chr5.4 CDS 67282183 67282236 67282183 ID=cds.MS.gene070535.t1;Parent=MS.gene070535.t1
chr5.4 exon 67281049 67281165 67281049 ID=MS.gene070535.t1.exon4;Parent=MS.gene070535.t1
chr5.4 CDS 67281049 67281165 67281049 ID=cds.MS.gene070535.t1;Parent=MS.gene070535.t1
chr5.4 exon 67280646 67280936 67280646 ID=MS.gene070535.t1.exon5;Parent=MS.gene070535.t1
chr5.4 CDS 67280646 67280936 67280646 ID=cds.MS.gene070535.t1;Parent=MS.gene070535.t1
chr5.4 exon 67279961 67280212 67279961 ID=MS.gene070535.t1.exon6;Parent=MS.gene070535.t1
chr5.4 CDS 67279961 67280212 67279961 ID=cds.MS.gene070535.t1;Parent=MS.gene070535.t1
chr5.4 exon 67279358 67279672 67279358 ID=MS.gene070535.t1.exon7;Parent=MS.gene070535.t1
chr5.4 CDS 67279358 67279672 67279358 ID=cds.MS.gene070535.t1;Parent=MS.gene070535.t1
Gene Sequence

>MS.gene070535

ATGCCAGAAAATAGACAAGTTTTCAAGAATGCTGGTTCTAATCCATCTGGTGATAACATTGAAGGTAATTCAATGAATGATTGATTTTTCTTTGAATTTTTTCATGTTTTGTGTTATGATTTGTTGTTTATGTTGTTTTTCTTGTTCTGATCATCATTGTTTTGGTTGGAAATATTTTATTTTCATTGATGATGATGATGATGATGATGATGATGATGTGTTTCTATTTTTGGTAGAATGAATTTGATTTGAATGATTTCTATTTTTGTTTTGTTTATGATTGATTCATGCAATGTTGTTGTATTGTGTGAGGTTTGATGATTTTTTTTGAAACTATGAGTTAACTTGTGTGAGTGAAAAAGGTTGCATCAATAGAAAATTATTATTATATTATGATTCCATGTTTACTTGCATAGAATCAAGTGTTATTATACTTGATCGCACATGGTTTTACAAAATTTGTGTACTTTGCTTTATGATGCAATAAAGGGTCGTAATCGTAATCTGCGTATTTTGATTTCAAATTCTTTATGATAGCTTTGAATTTCTGATCCAGTTTAATTGTATTGGACTGTGAGTGTGGTAATTTGTGTTATTACTGCTTGAATTTGTTGGAATGTTTGTTGAGAGATTGTGCAAGATATGTCTGATTCCTTTGTGATTCGTATTGCAGAAGCTATTCGGCGTTTGAAAATCAATAGTACTCGAGACAGAGATGCTGTGCCTCAATCAATGCCTTATCCGGATCGACCTGGTGAACCTGACTGCGTATATTATTTGAGGACTGGAATGTGTGGTTACGGGAGTAACTGCCGCTATAATCACCCTGCTAACATTTCACCTGTAATGGAGCTCTTTCTTTTCTTTCCTTTTCATGATTTTTCTTTCTGGATAGACATGAAGCAGTTTCTTAGGTCAAATATTTCATGAACATGTAGTCTGTGGAATTGTAATCTTGTTAAATTTTCTCATTGGTTCTATTATTCGTAATTTAGGTAAAAGTTTCTCATACTTCATTAGATTTCAGGTTACTCAATATGGTGAAGAACTTCCTGAGAGAGTTGGGCAACCTGATTGTGAGGTATGCTTATTTTTTGGTAACTAAAAATGTATTTGTTGTCATTTTTCTTTCCCTTGTTTTGAGCGGTGCTTCATGAAACCGAATGTGGATGTGGTTTATGCAAGAACTTTAAGAGTGAATTCAAGAATAGGCCTTTTTTTCCTTGAACAAATTCACTTTTTACATATGATATTTTACTATTTTCGTCTGACAGAAGTTTTAGTTTCCTTTTGCACTTAATTTTTGTCCTTTTGTGGTCTCTTATTTCCATTCAACCCCTTTAATAATAGGCTTCGCCTGTTTGAAATACTTGCTAATTCTTACATGAGCACATAATATATGTAGGCACTGAGACTATGCTCATACAAGGGAATTTCTCTGAAATATTTAGCCTAGGGACATGTTCATTGTTAGAACACCAATAAATGAAGTCGTAGGATACGGAATGAGGACGAAAAAATGAATAAGTTATGCTGCCAATGTGGAAAATCATCTTTTGTTTCCTTCCAAACATTTATTAGTTTTTTGTTTTGATGGACCTTATAGTGTGTCCTGTAGAATTTATTTACTAGATCTCTCTATGACAATAATGGCAAAGTTTCATTAGATGCTAGCCATAGCGTAATTTAAGAAGAAGAAGAAATAATGATATGAACTTTGAGTTTCACATCTATTGTACTAGAAATATCAAGTTCAGGAAATGAATAAAATCTGTAGATTTTGTGCATTCTTAATGTTAAATATTAGATACTTCATTGTTATTCCAATGCAATGAAAGTTGTTGGTAGCATATTACCTATAGACAACTTAATTAAGCGTTTATGGCTTAAGCGCTTATGATATAAGTACTTATGTATAAGCCATTTATATAACAAATAGATAAAACAAAGTCAAAACTGTTTTCAAAAGCTATCCTGGAGAGCTTATGGAAATTAGCTGAAAACATCTTTAGGACATGTCATAAGCCGTTTCCATAAGCTATTCCAAACAGAATTTAATATTAGTAACTTGTGATCTTGTTTGAAATATGTGTTGCAGTATTTTCTTAAGACAGGAACATGTAAGTATGGATCGACATGTAAATATCATCATCCCAAAGACAGGAGAGGTGCTGCACCCGTTGTCTTCAATACTTTAGGTCTTCCCATGCGTCAGGTTTGTACATCCCTTTGAACCAAGTGCTTTATTTTTTCCACAAAGTTTACTCTTCTAATGGAAGATGTTGAAGCAGTTGCGTTTTTCAATAATCTACAATTGTTGCTTTTAGGAAGAAAAATCATGTCCCTATTACATGAGAACTGGGTCTTGCAAGTTTGGAGTTGCATGCAAGTTTCATCATCCACAACAGGCAGCTTCCTTTGGAGGAGCTTATCCAGTGGCGGCGTCCCCTCCCTCCACAACTGTTACTTCATCAGGTTTTCCATATGCTGGTGGGTTTCCTGCATGGTCAATGCCGAGAATGTCATATTTATCTGGACAGGCCATTCAATCTTATGTGCCTCCTTTTTTGCCTTCTTCACAAGGCATTATGCCTGCGCTGAGCTGGAGCAACTACATGGTTAGTTAAAAACTGTTGAATGTCGTGTTTATATTTACAGTTACTGTGTTATTGAATGATCACACACATATACTGATTAACCTGGTATGGTTTAAAAACTGTCAAATATATTAGCTAAACGAATACACGAAGGTTAGAAATTAGAAAATCTTGTTACCATTTTTACTACTAGATGTCGCACACATTGCATGATTGACAATACTTTTGTTTCATTGATTTCCAATCACATTTGGCGCTCAAATACCGATTAACATCGAAAACAGAACCAGTCTTGTCTTGTTTAGGAAATATTCCTAGCCTTTTAGGATGTTTGGCTATGTTTGATTATGTTAGATTTCGTAACTACATGCATTCAGTGGTTACTGGTTACTTACTTTTTGCTGATTCAACTAAGATGTTCTGTTTTTGACTGCTATTTTATTTGTCGAAAAAGGGAAGTATTAACCCTGCAATGCCTACTGGTTTTATTGGATCTAATCTTGTCTACGACTACATGAATCCGGCGGGAGAGACTGGTGGACAGGTAATGAATTCATCTCTTCCAGATAGACCTGAGCAACCAGACTGTAAATACTTTATGAGCACCGGAACATGCAAATATGGATCTGATTGCAAGTTCCACCACCCTAAAGAAAGGATAGCACAAACATTATCAATTAATCCACTTGGTCTTCCTATGAGACCTGTAAGTGCATTTTCTTCTTAATGCTTTGGGTCCGTTTGTTCCAACTTTTTATTGTGAAAAAAAATCATTTTTTTAAATAAACAATTTTAGAAGTTTTCATGCATTTGTTATTTAAACAAAATGAGAATCTGAAAAAAATCTCCAAAAAATAATCTATAAACTATTGAATATCATTTTTTGTTACTTTGAAATATTTGTAAATATTATCCTCCCTAATATTTTAAGATACTTTTATAATAAGTTATCAAATTAATTTGATTTTCTGATTCCTATGTTGGTTGTCTGCAGGGAAATGCTATATGCTCTTATTACAGAATCTATGGAGTATGCAAGTTTGGTCCAACATGCAAATTTGATCATCCAGTTGTGGCTATCTCTCAGAACTACGGCTTGCCCTCGCCTACTCTATCAGTATTCGATGCATCTCTCCTTACTAATCCAAGAAGGCTTTCAACTGTCCAACCAACCGAGACATCTCCATCGAAACAATCAACTGACAAGCTTCAACAATCTGATACAAAAGCTGCTACCGAAGATTCATCTAAACAAGCTGACAGTACATCAACTTCTCGCACACCGTCGTCCGAGTCTTTACAGGAATAA
Protein sequence

>MS.gene070535.t1

MPENRQVFKNAGSNPSGDNIEEAIRRLKINSTRDRDAVPQSMPYPDRPGEPDCVYYLRTGMCGYGSNCRYNHPANISPVTQYGEELPERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPVVFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQQAASFGGAYPVAASPPSTTVTSSGFPYAGGFPAWSMPRMSYLSGQAIQSYVPPFLPSSQGIMPALSWSNYMGSINPAMPTGFIGSNLVYDYMNPAGETGGQVMNSSLPDRPEQPDCKYFMSTGTCKYGSDCKFHHPKERIAQTLSINPLGLPMRPGNAICSYYRIYGVCKFGPTCKFDHPVVAISQNYGLPSPTLSVFDASLLTNPRRLSTVQPTETSPSKQSTDKLQQSDTKAATEDSSKQADSTSTSRTPSSESLQE