Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98718.t1 | XP_024632573.1 | 98.2 | 949 | 17 | 0 | 1 | 949 | 1 | 949 | 0.00E+00 | 1793.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98718.t1 | Q6C8F7 | 19.5 | 400 | 272 | 12 | 29 | 394 | 6 | 389 | 3.9e-06 | 55.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98718.t1 | A0A072VMX4 | 98.2 | 949 | 17 | 0 | 1 | 949 | 1 | 949 | 0.0e+00 | 1793.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98718 | MS.gene68267 | PPI |
| MS.gene025598 | MS.gene98718 | PPI |
| MS.gene98718 | MS.gene54899 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98718.t1 | MTR_2g098850 | 98.209 | 949 | 17 | 0 | 1 | 949 | 1 | 949 | 0.0 | 1924 |
| MS.gene98718.t1 | MTR_2g098850 | 96.182 | 969 | 17 | 1 | 1 | 949 | 1 | 969 | 0.0 | 1910 |
| MS.gene98718.t1 | MTR_4g067110 | 70.213 | 987 | 242 | 5 | 1 | 949 | 1 | 973 | 0.0 | 1384 |
| MS.gene98718.t1 | MTR_7g091780 | 44.214 | 1011 | 475 | 17 | 2 | 949 | 6 | 990 | 0.0 | 802 |
| MS.gene98718.t1 | MTR_4g039320 | 55.212 | 518 | 214 | 2 | 1 | 518 | 1 | 500 | 0.0 | 619 |
| MS.gene98718.t1 | MTR_4g039320 | 37.850 | 428 | 215 | 11 | 554 | 949 | 620 | 1028 | 9.31e-62 | 228 |
| MS.gene98718.t1 | MTR_1g084090 | 33.784 | 1036 | 560 | 25 | 1 | 949 | 1 | 997 | 9.08e-179 | 545 |
| MS.gene98718.t1 | MTR_1g082810 | 52.273 | 88 | 42 | 0 | 50 | 137 | 12 | 99 | 8.47e-24 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98718.t1 | AT1G05960 | 55.176 | 995 | 387 | 13 | 1 | 949 | 1 | 982 | 0.0 | 1038 |
| MS.gene98718.t1 | AT1G05960 | 55.176 | 995 | 387 | 13 | 1 | 949 | 1 | 982 | 0.0 | 1038 |
| MS.gene98718.t1 | AT1G05960 | 55.176 | 995 | 387 | 13 | 1 | 949 | 1 | 982 | 0.0 | 1038 |
| MS.gene98718.t1 | AT1G05960 | 54.134 | 1016 | 386 | 14 | 1 | 949 | 1 | 1003 | 0.0 | 1025 |
| MS.gene98718.t1 | AT2G41830 | 53.131 | 527 | 230 | 3 | 2 | 518 | 6 | 525 | 0.0 | 605 |
| MS.gene98718.t1 | AT2G41830 | 38.257 | 413 | 233 | 7 | 551 | 949 | 621 | 1025 | 1.80e-65 | 239 |
| MS.gene98718.t1 | AT5G21080 | 54.864 | 514 | 218 | 3 | 1 | 507 | 1 | 507 | 0.0 | 592 |
| MS.gene98718.t1 | AT5G21080 | 40.000 | 365 | 172 | 14 | 542 | 883 | 624 | 964 | 2.74e-50 | 193 |
| MS.gene98718.t1 | AT5G26850 | 34.911 | 1014 | 560 | 22 | 1 | 948 | 1 | 980 | 0.0 | 555 |
| MS.gene98718.t1 | AT5G26850 | 34.911 | 1014 | 560 | 22 | 1 | 948 | 1 | 980 | 0.0 | 555 |
| MS.gene98718.t1 | AT5G26850 | 34.911 | 1014 | 560 | 22 | 1 | 948 | 1 | 980 | 0.0 | 555 |
| MS.gene98718.t1 | AT5G26850 | 34.911 | 1014 | 560 | 22 | 1 | 948 | 1 | 980 | 0.0 | 555 |
| MS.gene98718.t1 | AT2G41830 | 48.363 | 397 | 188 | 3 | 132 | 518 | 1 | 390 | 3.94e-126 | 404 |
| MS.gene98718.t1 | AT2G41830 | 38.257 | 413 | 233 | 7 | 551 | 949 | 486 | 890 | 4.71e-66 | 239 |
Find 205 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGATCTCATTAAACATTTA+AGG | 0.108763 | 2.1:+5572674 | MS.gene98718:CDS |
| ATAGATTATATCAGCAATTT+TGG | 0.141544 | 2.1:+5571957 | MS.gene98718:intron |
| GTCTCTTGCTTTCTTCAATC+TGG | 0.151994 | 2.1:+5573978 | MS.gene98718:CDS |
| GTCAGGGATGCTTTGACTTT+TGG | 0.153104 | 2.1:-5574820 | None:intergenic |
| CGTTGCTTCCTTTGCCAATT+TGG | 0.154788 | 2.1:-5572282 | None:intergenic |
| AAATCAGACAAAATAGTTTA+TGG | 0.211784 | 2.1:+5575045 | MS.gene98718:CDS |
| ATTCAGCATGAAAGTCTTTC+TGG | 0.219781 | 2.1:+5573611 | MS.gene98718:CDS |
| ATCAGGACCTCCATTGTTTA+TGG | 0.225767 | 2.1:+5575869 | MS.gene98718:CDS |
| GCTTTCTTCAATCTGGGTTC+AGG | 0.240475 | 2.1:+5573985 | MS.gene98718:CDS |
| AGATACATGGGCTTCTTCTT+TGG | 0.251988 | 2.1:-5572070 | None:intergenic |
| AAGAAAATGCTAACCTTAAC+AGG | 0.270752 | 2.1:-5576491 | None:intergenic |
| CTTGTATAATATAGCCAAAT+TGG | 0.273376 | 2.1:+5572268 | MS.gene98718:CDS |
| TGTGCGAAGCCAAGGTTAAA+AGG | 0.278558 | 2.1:-5574753 | None:intergenic |
| TTCCCTCAGGAGCATATCTT+TGG | 0.279931 | 2.1:+5574471 | MS.gene98718:CDS |
| TCTATTATTTACTCGTTCTA+AGG | 0.280983 | 2.1:+5574069 | MS.gene98718:CDS |
| TGAGCCAGTTGACATAGTTT+TGG | 0.281185 | 2.1:-5571155 | None:intergenic |
| CCTCACACTGGTTCTTCATT+TGG | 0.281646 | 2.1:-5576358 | None:intergenic |
| ATGTATCCCAGTTACCTTCT+TGG | 0.303139 | 2.1:-5574495 | None:intergenic |
| CGGCTAAGAATCCTGCTTAT+TGG | 0.314950 | 2.1:+5572234 | MS.gene98718:CDS |
| TTGTTGTGATACAACACATT+AGG | 0.316010 | 2.1:-5573321 | None:intergenic |
| GCCGTCACTCTCTACCTTCT+TGG | 0.318765 | 2.1:-5573582 | None:intergenic |
| GCAGATGAAGTGCGGATCTT+AGG | 0.320739 | 2.1:+5570823 | MS.gene98718:CDS |
| CAACTTCTTGTAACGTTTAA+CGG | 0.322561 | 2.1:-5567996 | None:intergenic |
| TGAAATCTTACCCCGTAATA+AGG | 0.322697 | 2.1:+5568024 | MS.gene98718:CDS |
| CCATCTTATGTTGTCCATAT+TGG | 0.323999 | 2.1:+5572525 | MS.gene98718:CDS |
| GATACATGGGCTTCTTCTTT+GGG | 0.325337 | 2.1:-5572069 | None:intergenic |
| GCCATTGCCTCATAATTTGC+AGG | 0.331368 | 2.1:-5574028 | None:intergenic |
| GAATACCTGATTCTGCTAAA+AGG | 0.331771 | 2.1:-5572409 | None:intergenic |
| CTTTCTTCAATCTGGGTTCA+GGG | 0.338815 | 2.1:+5573986 | MS.gene98718:CDS |
| ATCCAAGTGCTTGACCAATA+TGG | 0.341542 | 2.1:-5572539 | None:intergenic |
| CAGGGAACATCTGCTGAAAA+TGG | 0.345392 | 2.1:+5574004 | MS.gene98718:CDS |
| TTCAGGATCTAAGATCTCTT+AGG | 0.350091 | 2.1:+5573936 | MS.gene98718:intron |
| CCTGACCGTGAAACACAAAT+TGG | 0.353295 | 2.1:+5573488 | MS.gene98718:CDS |
| TACATACATGTTCAACTTAG+AGG | 0.356074 | 2.1:+5571124 | MS.gene98718:CDS |
| ACTACAAACTCTATCTTCTA+TGG | 0.359318 | 2.1:+5571223 | MS.gene98718:CDS |
| TTCTACCAGTTTCCCATTCA+AGG | 0.361845 | 2.1:-5573642 | None:intergenic |
| AACTAACCGGTGCTTCTGTC+AGG | 0.362702 | 2.1:-5574837 | None:intergenic |
| CCAATTTGTGTTTCACGGTC+AGG | 0.367633 | 2.1:-5573488 | None:intergenic |
| TGGTTCTTCATTTGGTCATA+AGG | 0.371786 | 2.1:-5576350 | None:intergenic |
| CAGTGTGAGGCCCTTGAAAC+AGG | 0.375084 | 2.1:+5576371 | MS.gene98718:CDS |
| TCTTACTAAAGCCATGTAAC+TGG | 0.377212 | 2.1:-5574431 | None:intergenic |
| GAAAATTGCTGTCGTCTTGT+AGG | 0.379487 | 2.1:+5570207 | MS.gene98718:CDS |
| AGTTTCCCGTCAACCTGTTA+AGG | 0.379918 | 2.1:+5576478 | MS.gene98718:CDS |
| ACCAACCGCCCAGATGTTCT+AGG | 0.381925 | 2.1:+5576109 | MS.gene98718:CDS |
| TCTCTTGCTTTCTTCAATCT+GGG | 0.383800 | 2.1:+5573979 | MS.gene98718:CDS |
| TGACTGGCTTCCACTTTGTT+CGG | 0.384685 | 2.1:-5576065 | None:intergenic |
| ATCAGAGAAATCGGCTGCTC+TGG | 0.390835 | 2.1:-5574791 | None:intergenic |
| TGCCATCTGTGGTTTCTCCT+TGG | 0.391450 | 2.1:+5573540 | MS.gene98718:CDS |
| CATGAAATTATACCTTATTA+CGG | 0.393853 | 2.1:-5568036 | None:intergenic |
| ATGAAATTATACCTTATTAC+GGG | 0.396896 | 2.1:-5568035 | None:intergenic |
| AATTGATGAAACAACGCATC+AGG | 0.397806 | 2.1:-5573446 | None:intergenic |
| TGATTAACACCTAGAACATC+TGG | 0.398163 | 2.1:-5576118 | None:intergenic |
| AACTTCTTGTAACGTTTAAC+GGG | 0.399434 | 2.1:-5567995 | None:intergenic |
| GTCACTATCAGCTGTACAAT+TGG | 0.399637 | 2.1:+5575098 | MS.gene98718:CDS |
| AGCTTTCAAGAATTTATCAT+AGG | 0.401656 | 2.1:-5576858 | None:intergenic |
| TGTTGTGATACAACACATTA+GGG | 0.403427 | 2.1:-5573320 | None:intergenic |
| TTTCTCTACCTTGGCAAGGT+TGG | 0.405784 | 2.1:-5572007 | None:intergenic |
| AGATCCCTTGAATGGGAAAC+TGG | 0.413750 | 2.1:+5573637 | MS.gene98718:CDS |
| TTGTAATATGCACATTTCAA+TGG | 0.414364 | 2.1:-5572773 | None:intergenic |
| GTGCTCCAATTTGTGTTTCA+CGG | 0.415252 | 2.1:-5573493 | None:intergenic |
| GAACCACTGGTCTTCTGAAA+AGG | 0.418783 | 2.1:+5572352 | MS.gene98718:CDS |
| TGGGAAATTCTTGAACCAAC+TGG | 0.419914 | 2.1:-5572050 | None:intergenic |
| TCATCAATTGCTACTGGCCA+TGG | 0.423313 | 2.1:+5573460 | MS.gene98718:CDS |
| TATCCCAAAACTATGTCAAC+TGG | 0.436399 | 2.1:+5571151 | MS.gene98718:CDS |
| CCTGATGATGCTTATCCATC+AGG | 0.442006 | 2.1:+5575852 | MS.gene98718:CDS |
| TGGAATCAGATCAGAGAAAT+CGG | 0.443201 | 2.1:-5574800 | None:intergenic |
| TTGTATCAGGTTGGAGATGC+AGG | 0.443500 | 2.1:+5573186 | MS.gene98718:intron |
| AACCACTGGTCTTCTGAAAA+GGG | 0.445232 | 2.1:+5572353 | MS.gene98718:CDS |
| CTATTTGCCAGTAGTTTGCT+AGG | 0.446027 | 2.1:+5570769 | MS.gene98718:CDS |
| TCTGGAGCAGATCCCTTGAA+TGG | 0.446950 | 2.1:+5573629 | MS.gene98718:CDS |
| ACTTGAAAGAACTATGGCCT+TGG | 0.447402 | 2.1:-5576444 | None:intergenic |
| GATAAATTCTTGAAAGCTGC+AGG | 0.448096 | 2.1:+5576863 | MS.gene98718:CDS |
| TCCACAGACATCCAGTTACA+TGG | 0.449793 | 2.1:+5574420 | MS.gene98718:intron |
| TGGGAAACTGGTAGAAGAAA+AGG | 0.453205 | 2.1:+5573649 | MS.gene98718:CDS |
| CCTTCGTCTATCAAATCATC+TGG | 0.453314 | 2.1:-5576034 | None:intergenic |
| TCTAGGTGTTAATCAACTCT+TGG | 0.455100 | 2.1:+5576126 | MS.gene98718:CDS |
| TTCATTTGGTCATAAGGTAA+AGG | 0.457246 | 2.1:-5576344 | None:intergenic |
| GTAGTTTGCTAGGGATCATT+CGG | 0.460329 | 2.1:+5570779 | MS.gene98718:CDS |
| TGAATTCAGTTTCTCTACCT+TGG | 0.460514 | 2.1:-5572016 | None:intergenic |
| GAGCTCAATGATAGGAAAAT+CGG | 0.463220 | 2.1:+5569500 | MS.gene98718:CDS |
| AGAAAGACTTTCATGCTGAA+TGG | 0.464680 | 2.1:-5573609 | None:intergenic |
| CCTTAAATGTTTAATGAGAT+CGG | 0.465046 | 2.1:-5572674 | None:intergenic |
| GTCCATATTGGTCAAGCACT+TGG | 0.465263 | 2.1:+5572537 | MS.gene98718:CDS |
| TTCAAAAGGAGATTTGAAGT+TGG | 0.466183 | 2.1:+5576742 | MS.gene98718:CDS |
| TTTGGCCAGGTGAAGTTCAT+GGG | 0.467465 | 2.1:+5571627 | MS.gene98718:intron |
| TCATCCACCAATTCAAGAAA+AGG | 0.470757 | 2.1:-5574997 | None:intergenic |
| TTTAGTAAGATGCTTCCAAT+TGG | 0.474294 | 2.1:+5574444 | MS.gene98718:CDS |
| AACGACTGTGCGGCGTGTCT+TGG | 0.477917 | 2.1:+5572301 | MS.gene98718:CDS |
| CATTCAACATCGAAGATACA+TGG | 0.478977 | 2.1:-5572083 | None:intergenic |
| GTTGTTTCATCAATTGCTAC+TGG | 0.481617 | 2.1:+5573454 | MS.gene98718:CDS |
| CAAGCCTCAGTTGCAGTCGT+TGG | 0.481700 | 2.1:+5572643 | MS.gene98718:CDS |
| CTATGGCCTTGGTCTCCTGC+TGG | 0.483473 | 2.1:-5576433 | None:intergenic |
| TGTTAATCAACTCTTGGAAT+CGG | 0.484775 | 2.1:+5576132 | MS.gene98718:CDS |
| CCAATATGGACAACATAAGA+TGG | 0.486702 | 2.1:-5572525 | None:intergenic |
| AGGTAAAGGAGTTGAGGAAG+TGG | 0.490305 | 2.1:-5576330 | None:intergenic |
| CTGGAGCAGATCCCTTGAAT+GGG | 0.491735 | 2.1:+5573630 | MS.gene98718:CDS |
| GTTCTTTCAAGTGAAAATGA+AGG | 0.494816 | 2.1:+5576455 | MS.gene98718:CDS |
| AATCTGAAGGATAGGTTGCT+TGG | 0.496345 | 2.1:-5572575 | None:intergenic |
| GAATCCTGCTTATTGGTCAA+AGG | 0.497986 | 2.1:+5572241 | MS.gene98718:CDS |
| CTGTTTCAAGGGCCTCACAC+TGG | 0.498594 | 2.1:-5576370 | None:intergenic |
| GTCATAAGGTAAAGGAGTTG+AGG | 0.498611 | 2.1:-5576336 | None:intergenic |
| AAAATTGCTGTCGTCTTGTA+GGG | 0.499139 | 2.1:+5570208 | MS.gene98718:CDS |
| TTATACAAACAGCCCGCAGC+AGG | 0.499960 | 2.1:-5575023 | None:intergenic |
| CCTGATGGATAAGCATCATC+AGG | 0.500725 | 2.1:-5575852 | None:intergenic |
| GCTTTCAAGAATTTATCATA+GGG | 0.501037 | 2.1:-5576857 | None:intergenic |
| TTGTCAGATTACAGAGAACT+TGG | 0.504334 | 2.1:+5570115 | MS.gene98718:intron |
| TCAGCTGAAGCAACCGACAT+TGG | 0.505319 | 2.1:+5572712 | MS.gene98718:CDS |
| ATCTGAGCAAGTGGAGAACC+TGG | 0.507631 | 2.1:-5575903 | None:intergenic |
| AAATGGCCCTGCAAATTATG+AGG | 0.509961 | 2.1:+5574021 | MS.gene98718:CDS |
| TCGATGTTGAATGTTGCGAC+AGG | 0.513988 | 2.1:+5572093 | MS.gene98718:CDS |
| GTGCGAAGCCAAGGTTAAAA+GGG | 0.514025 | 2.1:-5574752 | None:intergenic |
| TAGTGTCTTGTGAACGGAAG+CGG | 0.514599 | 2.1:-5576799 | None:intergenic |
| AGGTTGCTGAGCTCAATGAT+AGG | 0.515256 | 2.1:+5569492 | MS.gene98718:intron |
| ACATACATGTTCAACTTAGA+GGG | 0.518274 | 2.1:+5571125 | MS.gene98718:CDS |
| GCAAGTGGAGAACCTGGCCT+TGG | 0.519764 | 2.1:-5575897 | None:intergenic |
| TCTACCAGTTTCCCATTCAA+GGG | 0.520413 | 2.1:-5573641 | None:intergenic |
| TCCTGAGGGAAAATGCCAAT+TGG | 0.521190 | 2.1:-5574459 | None:intergenic |
| TGCTAACCTTAACAGGTTGA+CGG | 0.526104 | 2.1:-5576484 | None:intergenic |
| TTGTCTTGATCTTGCACGCA+AGG | 0.526405 | 2.1:-5567972 | None:intergenic |
| ATAATATCAATCTGAAGGAT+AGG | 0.527266 | 2.1:-5572583 | None:intergenic |
| CAAACCTTTGACCAATAAGC+AGG | 0.528978 | 2.1:-5572245 | None:intergenic |
| AATGATCCCTAGCAAACTAC+TGG | 0.529789 | 2.1:-5570776 | None:intergenic |
| CTTGATCTTGCACGCAAGGA+AGG | 0.532038 | 2.1:-5567968 | None:intergenic |
| CCCTGCAAATTATGAGGCAA+TGG | 0.533075 | 2.1:+5574027 | MS.gene98718:CDS |
| CAGGCACTAGAATATTCAAA+AGG | 0.535759 | 2.1:+5576728 | MS.gene98718:intron |
| TCATCACTTTCACAGGGATA+CGG | 0.536957 | 2.1:+5572214 | MS.gene98718:intron |
| ACCTAGAACATCTGGGCGGT+TGG | 0.539791 | 2.1:-5576110 | None:intergenic |
| GCAGGCGGGAACAACCCGCC+TGG | 0.541194 | 2.1:-5567924 | None:intergenic |
| GCTCTGCTTCTACGTTCAGC+TGG | 0.545387 | 2.1:+5571200 | MS.gene98718:CDS |
| GATCTGCGTAATGAAAGCTT+TGG | 0.548201 | 2.1:+5570155 | MS.gene98718:CDS |
| ATAAACAATGGAGGTCCTGA+TGG | 0.548590 | 2.1:-5575867 | None:intergenic |
| TATAAGCATGTGCGAAGCCA+AGG | 0.550236 | 2.1:-5574761 | None:intergenic |
| CTTGGAGCAAAGATGTTACA+AGG | 0.550383 | 2.1:+5570133 | MS.gene98718:CDS |
| TGCACCAACGACTGCAACTG+AGG | 0.550572 | 2.1:-5572647 | None:intergenic |
| TTTATGGAGACACCAAGGCC+AGG | 0.551245 | 2.1:+5575885 | MS.gene98718:CDS |
| GCTAACCTTAACAGGTTGAC+GGG | 0.552218 | 2.1:-5576483 | None:intergenic |
| ACTCACTTTGTCAAAATCCA+TGG | 0.552219 | 2.1:-5571667 | None:intergenic |
| TCAGTTTCTCTACCTTGGCA+AGG | 0.555085 | 2.1:-5572011 | None:intergenic |
| AGCAAACTACTGGCAAATAG+TGG | 0.556008 | 2.1:-5570766 | None:intergenic |
| CTGGTTCTTAAAACTGCGAA+TGG | 0.560241 | 2.1:-5576414 | None:intergenic |
| ATGTCAACTGGCTCAAGAAG+TGG | 0.563947 | 2.1:+5571163 | MS.gene98718:CDS |
| TATTTGCCAGTAGTTTGCTA+GGG | 0.566348 | 2.1:+5570770 | MS.gene98718:CDS |
| AATACAGAGGTTACCGCAGG+CGG | 0.566552 | 2.1:-5567939 | None:intergenic |
| GATTTGATAGACGAAGGGAG+TGG | 0.568569 | 2.1:+5576040 | MS.gene98718:CDS |
| AGCATCCCTGACAGAAGCAC+CGG | 0.568572 | 2.1:+5574831 | MS.gene98718:CDS |
| CCATTGCCTCATAATTTGCA+GGG | 0.571980 | 2.1:-5574027 | None:intergenic |
| GGTGGATGATAACCTGCTGC+GGG | 0.572873 | 2.1:+5575011 | MS.gene98718:CDS |
| GACTTTCATGCTGAATGGAA+AGG | 0.573928 | 2.1:-5573604 | None:intergenic |
| CAAAATAGTTTATGGATCTG+TGG | 0.575711 | 2.1:+5575053 | MS.gene98718:CDS |
| GAGGCTTACCACCATCTCGC+AGG | 0.575916 | 2.1:+5574725 | MS.gene98718:CDS |
| GCTTCCTAGTGTCTTGTGAA+CGG | 0.579072 | 2.1:-5576805 | None:intergenic |
| TGTTAATAATATCAATCTGA+AGG | 0.579561 | 2.1:-5572588 | None:intergenic |
| AGGGACCTCCTGCGAGATGG+TGG | 0.582709 | 2.1:-5574733 | None:intergenic |
| CATATTACAACTTTCAAACA+AGG | 0.583685 | 2.1:+5572786 | MS.gene98718:CDS |
| TTATCATAGGGGCTCGAAGG+TGG | 0.586508 | 2.1:-5576845 | None:intergenic |
| AAAAGGGACCTCCTGCGAGA+TGG | 0.588416 | 2.1:-5574736 | None:intergenic |
| AATTTATCATAGGGGCTCGA+AGG | 0.589435 | 2.1:-5576848 | None:intergenic |
| AGCATATCTTTGGACCAAGA+AGG | 0.591122 | 2.1:+5574481 | MS.gene98718:CDS |
| AGGCGGGTTGTTCCCGCCTG+CGG | 0.592808 | 2.1:+5567926 | MS.gene98718:CDS |
| CCAGATGATTTGATAGACGA+AGG | 0.594031 | 2.1:+5576034 | MS.gene98718:CDS |
| TATGGTGCTCATGCCATCTG+TGG | 0.596108 | 2.1:+5573529 | MS.gene98718:CDS |
| TGTCAACTGGCTCAAGAAGT+GGG | 0.598481 | 2.1:+5571164 | MS.gene98718:CDS |
| ATTTGATAGACGAAGGGAGT+GGG | 0.599238 | 2.1:+5576041 | MS.gene98718:CDS |
| TTGAACTAAAAGTAGACAGA+TGG | 0.600239 | 2.1:+5571101 | MS.gene98718:intron |
| ACTAACCGGTGCTTCTGTCA+GGG | 0.600475 | 2.1:-5574836 | None:intergenic |
| ACCACTGGTCTTCTGAAAAG+GGG | 0.600634 | 2.1:+5572354 | MS.gene98718:CDS |
| TAATATAGCCAAATTGGCAA+AGG | 0.601822 | 2.1:+5572274 | MS.gene98718:CDS |
| GGGAACTCTATCTGAGCAAG+TGG | 0.603721 | 2.1:-5575912 | None:intergenic |
| CAATATGGACAACATAAGAT+GGG | 0.604028 | 2.1:-5572524 | None:intergenic |
| ATCTAAATCCAACCTTGCCA+AGG | 0.605271 | 2.1:+5571999 | MS.gene98718:CDS |
| ATACAGAGGTTACCGCAGGC+GGG | 0.606778 | 2.1:-5567938 | None:intergenic |
| TGGTGGATGATAACCTGCTG+CGG | 0.607006 | 2.1:+5575010 | MS.gene98718:CDS |
| TTCACAATCTCAGAACCAGT+TGG | 0.609615 | 2.1:+5572035 | MS.gene98718:CDS |
| TGAGCACTCACATCTATCCA+TGG | 0.610011 | 2.1:+5571650 | MS.gene98718:CDS |
| ATTGATGAAACAACGCATCA+GGG | 0.611434 | 2.1:-5573445 | None:intergenic |
| ATACGCATCATTTCCAATGT+CGG | 0.614408 | 2.1:-5572725 | None:intergenic |
| TAAGAACCAGCAGGAGACCA+AGG | 0.614641 | 2.1:+5576427 | MS.gene98718:CDS |
| GTCCAAAGATATGCTCCTGA+GGG | 0.617155 | 2.1:-5574473 | None:intergenic |
| CTTTCAAGAATTTATCATAG+GGG | 0.618755 | 2.1:-5576856 | None:intergenic |
| CAGATGATTTGATAGACGAA+GGG | 0.619168 | 2.1:+5576035 | MS.gene98718:CDS |
| AGAGTTCCCTGATGTTGATG+AGG | 0.623066 | 2.1:+5575926 | MS.gene98718:CDS |
| GGTCCAAAGATATGCTCCTG+AGG | 0.625750 | 2.1:-5574474 | None:intergenic |
| GAATCCACTGAGAATTCCCA+AGG | 0.626646 | 2.1:+5569547 | MS.gene98718:CDS |
| TCCAAGAAGGTAGAGAGTGA+CGG | 0.634799 | 2.1:+5573581 | MS.gene98718:CDS |
| TATTATTAACATCACCACAC+AGG | 0.636418 | 2.1:+5572600 | MS.gene98718:CDS |
| CCACTGGTCTTCTGAAAAGG+GGG | 0.638125 | 2.1:+5572355 | MS.gene98718:CDS |
| AAGAAAGCAAGAGACTCACT+TGG | 0.642476 | 2.1:-5573970 | None:intergenic |
| TTCACGGTCAGGATGAGCCA+TGG | 0.645077 | 2.1:-5573477 | None:intergenic |
| GCTTCCGTTCACAAGACACT+AGG | 0.647855 | 2.1:+5576801 | MS.gene98718:CDS |
| CTTGGTGTCTCCATAAACAA+TGG | 0.651412 | 2.1:-5575879 | None:intergenic |
| ATTCAACATCGAAGATACAT+GGG | 0.652123 | 2.1:-5572082 | None:intergenic |
| ATTACCTTGGGAATTCTCAG+TGG | 0.654249 | 2.1:-5569551 | None:intergenic |
| GATTAACACCTAGAACATCT+GGG | 0.656514 | 2.1:-5576117 | None:intergenic |
| GTGATGTTCTACGATCTGAC+TGG | 0.658238 | 2.1:-5576081 | None:intergenic |
| AACCAAGGAGAAACCACAGA+TGG | 0.663257 | 2.1:-5573542 | None:intergenic |
| GCTTACCACCATCTCGCAGG+AGG | 0.664540 | 2.1:+5574728 | MS.gene98718:CDS |
| GGGAGTGGGACCGAACAAAG+TGG | 0.665867 | 2.1:+5576055 | MS.gene98718:CDS |
| CAAAGGAAGCAACGACTGTG+CGG | 0.665878 | 2.1:+5572291 | MS.gene98718:CDS |
| TAATGTGTTGTATCACAACA+AGG | 0.672528 | 2.1:+5573323 | MS.gene98718:CDS |
| AAACACGAGCAGATGAAGTG+CGG | 0.678176 | 2.1:+5570815 | MS.gene98718:CDS |
| GGTGTCTCCATAAACAATGG+AGG | 0.682652 | 2.1:-5575876 | None:intergenic |
| CATTGTTTATGGAGACACCA+AGG | 0.696387 | 2.1:+5575880 | MS.gene98718:CDS |
| CCAAATGAAGAACCAGTGTG+AGG | 0.701459 | 2.1:+5576358 | MS.gene98718:CDS |
| TGAAATTATACCTTATTACG+GGG | 0.709279 | 2.1:-5568034 | None:intergenic |
| TAACACCTAGAACATCTGGG+CGG | 0.824221 | 2.1:-5576114 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 5567911 | 5576892 | 5567911 | ID=MS.gene98718 |
| chr2.1 | mRNA | 5567911 | 5576892 | 5567911 | ID=MS.gene98718.t1;Parent=MS.gene98718 |
| chr2.1 | exon | 5567911 | 5568045 | 5567911 | ID=MS.gene98718.t1.exon1;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5567911 | 5568045 | 5567911 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5569494 | 5569568 | 5569494 | ID=MS.gene98718.t1.exon2;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5569494 | 5569568 | 5569494 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5570122 | 5570237 | 5570122 | ID=MS.gene98718.t1.exon3;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5570122 | 5570237 | 5570122 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5570765 | 5570879 | 5570765 | ID=MS.gene98718.t1.exon4;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5570765 | 5570879 | 5570765 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5571116 | 5571244 | 5571116 | ID=MS.gene98718.t1.exon5;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5571116 | 5571244 | 5571116 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5571636 | 5571683 | 5571636 | ID=MS.gene98718.t1.exon6;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5571636 | 5571683 | 5571636 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5571961 | 5572136 | 5571961 | ID=MS.gene98718.t1.exon7;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5571961 | 5572136 | 5571961 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5572229 | 5572425 | 5572229 | ID=MS.gene98718.t1.exon8;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5572229 | 5572425 | 5572229 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5572515 | 5572807 | 5572515 | ID=MS.gene98718.t1.exon9;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5572515 | 5572807 | 5572515 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5573195 | 5573344 | 5573195 | ID=MS.gene98718.t1.exon10;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5573195 | 5573344 | 5573195 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5573440 | 5573670 | 5573440 | ID=MS.gene98718.t1.exon11;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5573440 | 5573670 | 5573440 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5573941 | 5574090 | 5573941 | ID=MS.gene98718.t1.exon12;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5573941 | 5574090 | 5573941 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5574427 | 5574502 | 5574427 | ID=MS.gene98718.t1.exon13;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5574427 | 5574502 | 5574427 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5574725 | 5574852 | 5574725 | ID=MS.gene98718.t1.exon14;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5574725 | 5574852 | 5574725 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5574991 | 5575185 | 5574991 | ID=MS.gene98718.t1.exon15;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5574991 | 5575185 | 5574991 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5575807 | 5575947 | 5575807 | ID=MS.gene98718.t1.exon16;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5575807 | 5575947 | 5575807 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5576025 | 5576153 | 5576025 | ID=MS.gene98718.t1.exon17;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5576025 | 5576153 | 5576025 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5576296 | 5576499 | 5576296 | ID=MS.gene98718.t1.exon18;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5576296 | 5576499 | 5576296 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| chr2.1 | exon | 5576731 | 5576892 | 5576731 | ID=MS.gene98718.t1.exon19;Parent=MS.gene98718.t1 |
| chr2.1 | CDS | 5576731 | 5576892 | 5576731 | ID=cds.MS.gene98718.t1;Parent=MS.gene98718.t1 |
| Gene Sequence |
| Protein sequence |