AlfalfaGEDB | MS.gene98856

M. sativa cultivar XinJiangDaYe / MS.gene98856

KEGG: -
GO: GO:0001101 GO:0008150 GO:0009415 GO:0009628 GO:0010035 GO:0042221 GO:0050896 GO:1901700
PFAM: PF00257.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98856.t1	ABX80061.1	93.4	229	9	2	1	229	1	223	1.70E-19	106.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98856.t1	B1NY75	93.4	229	9	2	1	229	1	223	1.2e-19	106.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene05474	MS.gene98856	0.9576	1.83E-115	-1.69E-46
MS.gene058490	MS.gene98856	0.831974	1.23E-55	-1.69E-46
MS.gene059776	MS.gene98856	0.818331	2.07E-52	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98856.t1	MTR_6g084640	48.319	238	62	6	64	266	99	310	8.63e-29	111

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 109 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGGAGCTGTGGACAAGATTA+AGG	0.291835	6.1:-74226354	MS.gene98856:CDS
CCAGTTCCAGTTCCAGTTCC+AGG	0.305674	6.1:+74226518	None:intergenic
AAAATTCCTGGCACTGGAAC+TGG	0.317217	6.1:-74226671	MS.gene98856:CDS
ACTGGTAGGGTTGATGAATA+TGG	0.317246	6.1:-74227169	MS.gene98856:CDS
CCTGGAACTGGAACTGGAAC+TGG	0.334665	6.1:-74226518	MS.gene98856:CDS
CCTGGCACTGGAACTGGAAC+TGG	0.334665	6.1:-74226665	MS.gene98856:CDS
AGTCATCCCACCACCACTAA+TGG	0.343093	6.1:+74227105	None:intergenic
CATGGAGTTGATACAGGATA+TGG	0.344401	6.1:-74227049	MS.gene98856:CDS
AGGGGTAGTGGACAAGATTA+AGG	0.345858	6.1:-74226696	MS.gene98856:CDS
TCTAATGCAGGTGGTGGTTA+TGG	0.353755	6.1:-74226815	MS.gene98856:intron
AGCTCCATAGCCGGTTGTTC+CGG	0.355691	6.1:+74226748	None:intergenic
AAGATTCCTGGAACTGGAAC+TGG	0.359093	6.1:-74226524	MS.gene98856:CDS
ACTGGAACTGGAACTGGAAC+TGG	0.365048	6.1:-74226512	MS.gene98856:CDS
GGTGCTACTGGAACTGGAAC+TGG	0.370972	6.1:-74226464	MS.gene98856:CDS
GGAGCTACAGGTGGCGGAAC+TGG	0.372221	6.1:-74226731	MS.gene98856:CDS
GGTTATGGTGCTACTGGAAC+TGG	0.375981	6.1:-74226470	MS.gene98856:CDS
AAGATTAAGGAGAAAATTCC+TGG	0.378788	6.1:-74226683	MS.gene98856:CDS
AAGATCAAGGAGAAGATTCC+TGG	0.387597	6.1:-74226536	MS.gene98856:CDS
GGCAATGATATTGATGGAAC+CGG	0.397847	6.1:-74226791	MS.gene98856:CDS
ACTGGAACTGGAACTGGAAC+TGG	0.407435	6.1:-74226659	MS.gene98856:CDS
ACTGGAACTGGAACTGGAAC+AGG	0.408098	6.1:-74226653	MS.gene98856:CDS
ACTGGAACTGGAACTGGAAC+AGG	0.409631	6.1:-74226506	MS.gene98856:CDS
CAAGGCCAAGTTGATCAATA+TGG	0.416063	6.1:-74227133	MS.gene98856:CDS
CATATTGATCAACTTGGCCT+TGG	0.419277	6.1:+74227134	None:intergenic
TATGGTACAGGGACAGGAAC+CGG	0.420603	6.1:-74226767	MS.gene98856:CDS
AAAATTAAGGAGAAGATTCC+TGG	0.424067	6.1:-74226107	MS.gene98856:CDS
ACTGGAACTGGAACTGGAAC+AGG	0.426009	6.1:-74226458	MS.gene98856:CDS
GGTGGGATGACTGGTGCTAC+TGG	0.426647	6.1:-74227094	MS.gene98856:CDS
AAGGAGAAGATTCCTGGAAC+TGG	0.429498	6.1:-74226530	MS.gene98856:CDS
ATCAACTTGGCCTTGGCTCA+AGG	0.433377	6.1:+74227141	None:intergenic
GGCAATCCCATTAGTGGTGG+TGG	0.433710	6.1:-74227112	MS.gene98856:CDS
GTCATCCCACCACCACTAAT+GGG	0.445577	6.1:+74227106	None:intergenic
CAACTCCATGATGTTGTTGA+TGG	0.447783	6.1:+74227062	None:intergenic
GGAACAGGTCGTGGAACAAC+TGG	0.455989	6.1:-74226638	MS.gene98856:CDS
TCAACTTGGCCTTGGCTCAA+GGG	0.457612	6.1:+74227142	None:intergenic
CAACTTGGCCTTGGCTCAAG+GGG	0.457999	6.1:+74227143	None:intergenic
GATATTGATGGAACCGGGTA+TGG	0.458419	6.1:-74226785	MS.gene98856:CDS
GGAACAGGTCATGGAACAAC+TGG	0.460620	6.1:-74226443	MS.gene98856:CDS
GGAACAGGTCATGGAACAAC+TGG	0.460620	6.1:-74226491	MS.gene98856:CDS
GGGACAGGAACCGGAACAAC+CGG	0.462844	6.1:-74226758	MS.gene98856:CDS
ACAACTGGTTATGGTGATAC+TGG	0.463302	6.1:-74226623	MS.gene98856:CDS
ATTAGTGGTGGTGGGATGAC+TGG	0.468498	6.1:-74227103	MS.gene98856:CDS
AAGATTAAGGAGAAGATTCC+TGG	0.468840	6.1:-74226341	MS.gene98856:intron
AAGGAGAAGATTCCTGGTAC+TGG	0.469022	6.1:-74226101	MS.gene98856:CDS
CAACATCATGGAGTTGATAC+AGG	0.473204	6.1:-74227055	MS.gene98856:CDS
GGTCATGGAACAACTGGTTA+TGG	0.473670	6.1:-74226437	MS.gene98856:CDS
GGTCATGGAACAACTGGTTA+TGG	0.473670	6.1:-74226485	MS.gene98856:CDS
GATGGAACCGGGTATGGTAC+AGG	0.478285	6.1:-74226779	MS.gene98856:CDS
ACCGGGTATGGTACAGGGAC+AGG	0.478921	6.1:-74226773	MS.gene98856:CDS
CCAGTTCCAGTTCCAGTGCC+AGG	0.482887	6.1:+74226665	None:intergenic
TATGGAGCACACACTGGTAG+TGG	0.483406	6.1:-74227031	MS.gene98856:CDS
CAACAAGGTGGTGATCAAAC+TGG	0.483657	6.1:-74227187	MS.gene98856:CDS
AAGGAGAAAATTCCTGGCAC+TGG	0.489221	6.1:-74226677	MS.gene98856:CDS
ACTGGAACTGGAACAGGTCG+TGG	0.491588	6.1:-74226647	MS.gene98856:CDS
ACAACTGGTTATGGTGCTAC+TGG	0.493358	6.1:-74226476	MS.gene98856:CDS
GATGTTGGTCATGGAACAAC+TGG	0.494534	6.1:-74226407	MS.gene98856:CDS
GGTCGTGGAACAACTGGTTA+TGG	0.505394	6.1:-74226632	MS.gene98856:CDS
CCAGTACATGATCCAGTACC+AGG	0.505527	6.1:+74226089	None:intergenic
TCCTGTCCCTGTACCATACC+CGG	0.506624	6.1:+74226772	None:intergenic
ATGACTGGTGCTACTGGTCA+TGG	0.507846	6.1:-74227088	MS.gene98856:CDS
GGAACCGGAACAACCGGCTA+TGG	0.510275	6.1:-74226752	MS.gene98856:CDS
TATGGAGGCAATGATATTGA+TGG	0.512516	6.1:-74226797	MS.gene98856:CDS
CAATATGGCAATCCCATTAG+TGG	0.515585	6.1:-74227118	MS.gene98856:CDS
CCTGGTACTGGATCATGTAC+TGG	0.516603	6.1:-74226089	MS.gene98856:CDS
ACATGATAACAGAGGGGTAG+TGG	0.519568	6.1:-74226708	MS.gene98856:CDS
GGTGTTGGTCAAGGAACAAC+TGG	0.521239	6.1:-74226602	MS.gene98856:CDS
ACTGGAACTGGAACAGGTCA+TGG	0.523949	6.1:-74226452	MS.gene98856:CDS
ACTGGAACTGGAACAGGTCA+TGG	0.523949	6.1:-74226500	MS.gene98856:CDS
ATGGAGCACACACTGGTAGT+GGG	0.531357	6.1:-74227030	MS.gene98856:CDS
TATGGAAAAGAGGGTCATCA+TGG	0.533254	6.1:-74226173	MS.gene98856:intron
GATTGCCATATTGATCAACT+TGG	0.539982	6.1:+74227128	None:intergenic
GCCACCTGTAGCTCCATAGC+CGG	0.542385	6.1:+74226739	None:intergenic
GGCTATGGAGCTACAGGTGG+CGG	0.544468	6.1:-74226737	MS.gene98856:CDS
CAACAACATGGAGATAATAG+AGG	0.547854	6.1:-74226374	MS.gene98856:CDS
AGGCGTTGTGGACAAGATCA+AGG	0.548220	6.1:-74226549	MS.gene98856:CDS
CAACAACATGGAGAAAATAG+AGG	0.549779	6.1:-74226569	MS.gene98856:CDS
ACAACCGGCTATGGAGCTAC+AGG	0.564829	6.1:-74226743	MS.gene98856:CDS
TGGAGCACACACTGGTAGTG+GGG	0.568494	6.1:-74227029	MS.gene98856:CDS
GGAGCACACACTGGTAGTGG+GGG	0.573484	6.1:-74227028	MS.gene98856:CDS
GGTTATGGTGCTACTGATGT+TGG	0.578797	6.1:-74226422	MS.gene98856:CDS
AGCACACACTGGTAGTGGGG+GGG	0.584256	6.1:-74227026	MS.gene98856:CDS
GGACACCATCAACAACATCA+TGG	0.598586	6.1:-74227067	MS.gene98856:CDS
TATGGAAACCCCTTGAGCCA+AGG	0.599812	6.1:-74227151	MS.gene98856:CDS
AAGGTGGTGATCAAACTGGT+AGG	0.600281	6.1:-74227183	MS.gene98856:CDS
AATGCAGGTGGTGGTTATGG+AGG	0.603848	6.1:-74226812	MS.gene98856:intron
GAGCACACACTGGTAGTGGG+GGG	0.605413	6.1:-74227027	MS.gene98856:CDS
TGGAGATAATAGAGGAGCTG+TGG	0.607582	6.1:-74226366	MS.gene98856:CDS
GGTGATACTGGTGTTGGTCA+AGG	0.612946	6.1:-74226611	MS.gene98856:CDS
ATGGAACCGGGTATGGTACA+GGG	0.613026	6.1:-74226778	MS.gene98856:CDS
GGTGCTACTGATGTTGGTCA+TGG	0.613547	6.1:-74226416	MS.gene98856:CDS
TGGAGAAAATAGAGGCGTTG+TGG	0.618382	6.1:-74226561	MS.gene98856:CDS
GGTCATGGAACAACTGGTGT+TGG	0.623411	6.1:-74226401	MS.gene98856:CDS
GGTTATGGTGATACTGGTGT+TGG	0.623712	6.1:-74226617	MS.gene98856:CDS
GAACTGGACATGATAACAGA+GGG	0.628252	6.1:-74226715	MS.gene98856:CDS
AGGTGGTGATCAAACTGGTA+GGG	0.630608	6.1:-74227182	MS.gene98856:CDS
GGTCAAGGAACAACTGGTGT+TGG	0.634078	6.1:-74226596	MS.gene98856:CDS
GCAATCCCATTAGTGGTGGT+GGG	0.635724	6.1:-74227111	MS.gene98856:CDS
GCAATGATATTGATGGAACC+GGG	0.652870	6.1:-74226790	MS.gene98856:CDS
ACAGGATATGGAGCACACAC+TGG	0.655453	6.1:-74227037	MS.gene98856:CDS
ACTGGATCATGTACTGGACA+TGG	0.658437	6.1:-74226083	MS.gene98856:CDS
TATGGCAATCCCATTAGTGG+TGG	0.666004	6.1:-74227115	MS.gene98856:CDS
ACCGGCTATGGAGCTACAGG+TGG	0.667930	6.1:-74226740	MS.gene98856:CDS
GGACATGATGAGCAACACCT+TGG	0.668375	6.1:-74226152	MS.gene98856:CDS
GGTGTTGGTCATCAACAACA+TGG	0.679464	6.1:-74226386	MS.gene98856:CDS
GGTGTTGGTCATCAACAACA+TGG	0.679464	6.1:-74226581	MS.gene98856:CDS
GGAACTGGACATGATAACAG+AGG	0.719077	6.1:-74226716	MS.gene98856:CDS
ACAATGTCTCAATATCAACA+AGG	0.721195	6.1:-74227202	MS.gene98856:CDS
ATGTCTCAATATCAACAAGG+TGG	0.725256	6.1:-74227199	MS.gene98856:CDS
AACTGGACATGATAACAGAG+GGG	0.772871	6.1:-74226714	MS.gene98856:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTCAAATTCAAATGATTAT+CGG	-	chr6.1:74226385-74226404	MS.gene98856:CDS	15.0%
!!	GTACTGAACAAAATATTTAT+GGG	-	chr6.1:74226947-74226966	MS.gene98856:intron	20.0%
!	AGGGATTATGGAAAAAATTA+AGG	-	chr6.1:74227146-74227165	MS.gene98856:CDS	25.0%
!!	CAATGTTTTATATCTAATGC+AGG	-	chr6.1:74226439-74226458	MS.gene98856:CDS	25.0%
!!	GGTACTGAACAAAATATTTA+TGG	-	chr6.1:74226946-74226965	MS.gene98856:intron	25.0%
!!	TAAATATTTTGTTCAGTACC+AGG	+	chr6.1:74226946-74226965	None:intergenic	25.0%
	AAAATTAAGGAGAAGATTCC+TGG	-	chr6.1:74227159-74227178	MS.gene98856:CDS	30.0%
	AAGATTAAGGAGAAAATTCC+TGG	-	chr6.1:74226583-74226602	MS.gene98856:CDS	30.0%
	GAACAAAATATTTATGGGAC+AGG	-	chr6.1:74226952-74226971	MS.gene98856:intron	30.0%
	TAGACTAATTAGTTACCTGT+GGG	+	chr6.1:74226268-74226287	None:intergenic	30.0%
	TTAGACTAATTAGTTACCTG+TGG	+	chr6.1:74226269-74226288	None:intergenic	30.0%
!	TGTTTTATATCTAATGCAGG+TGG	-	chr6.1:74226442-74226461	MS.gene98856:CDS	30.0%
	AACACCTTGGTGAGAAAAAA+GGG	-	chr6.1:74227127-74227146	MS.gene98856:CDS	35.0%
	AAGATTAAGGAGAAGATTCC+TGG	-	chr6.1:74226925-74226944	MS.gene98856:intron	35.0%
	AATATTTATGGGACAGGAAC+AGG	-	chr6.1:74226958-74226977	MS.gene98856:intron	35.0%
	ATGTCTCAATATCAACAAGG+TGG	-	chr6.1:74226067-74226086	MS.gene98856:CDS	35.0%
	CAACAACATGGAGAAAATAG+AGG	-	chr6.1:74226697-74226716	MS.gene98856:CDS	35.0%
	CAACAACATGGAGATAATAG+AGG	-	chr6.1:74226892-74226911	MS.gene98856:intron	35.0%
	GATTGCCATATTGATCAACT+TGG	+	chr6.1:74226141-74226160	None:intergenic	35.0%
	TATGGAGGCAATGATATTGA+TGG	-	chr6.1:74226469-74226488	MS.gene98856:CDS	35.0%
	TGGTGAGAAAAAAGGGATTA+TGG	-	chr6.1:74227134-74227153	MS.gene98856:CDS	35.0%
	TTTATATCTAATGCAGGTGG+TGG	-	chr6.1:74226445-74226464	MS.gene98856:CDS	35.0%
!!!	TAATCCCTTTTTTCTCACCA+AGG	+	chr6.1:74227134-74227153	None:intergenic	35.0%
	AACTGGACATGATAACAGAG+GGG	-	chr6.1:74226552-74226571	MS.gene98856:CDS	40.0%
	AAGATCAAGGAGAAGATTCC+TGG	-	chr6.1:74226730-74226749	MS.gene98856:CDS	40.0%
	ACAACTGGTTATGGTGATAC+TGG	-	chr6.1:74226643-74226662	MS.gene98856:CDS	40.0%
	CAACACCTTGGTGAGAAAAA+AGG	-	chr6.1:74227126-74227145	MS.gene98856:CDS	40.0%
	CAACTCCATGATGTTGTTGA+TGG	+	chr6.1:74226207-74226226	None:intergenic	40.0%
	CAATATGGCAATCCCATTAG+TGG	-	chr6.1:74226148-74226167	MS.gene98856:CDS	40.0%
	CATATTGATCAACTTGGCCT+TGG	+	chr6.1:74226135-74226154	None:intergenic	40.0%
	GAACTGGACATGATAACAGA+GGG	-	chr6.1:74226551-74226570	MS.gene98856:CDS	40.0%
	GCAATGATATTGATGGAACC+GGG	-	chr6.1:74226476-74226495	MS.gene98856:CDS	40.0%
	GGCAATGATATTGATGGAAC+CGG	-	chr6.1:74226475-74226494	MS.gene98856:CDS	40.0%
	TATGGAAAAGAGGGTCATCA+TGG	-	chr6.1:74227093-74227112	MS.gene98856:CDS	40.0%
!	GGACAAGAGTATGGAAAAGA+GGG	-	chr6.1:74227084-74227103	MS.gene98856:CDS	40.0%
!	TGGACAAGAGTATGGAAAAG+AGG	-	chr6.1:74227083-74227102	MS.gene98856:CDS	40.0%
!	TTTTGTGTCTGACTGAAGCA+TGG	-	chr6.1:74226341-74226360	MS.gene98856:intron	40.0%
!!	ACTGGTAGGGTTGATGAATA+TGG	-	chr6.1:74226097-74226116	MS.gene98856:CDS	40.0%
!!	CAACATCATGGAGTTGATAC+AGG	-	chr6.1:74226211-74226230	MS.gene98856:intron	40.0%
!!	CAAGGCCAAGTTGATCAATA+TGG	-	chr6.1:74226133-74226152	MS.gene98856:CDS	40.0%
!!	CATGGAGTTGATACAGGATA+TGG	-	chr6.1:74226217-74226236	MS.gene98856:intron	40.0%
	AAGATTCCTGGAACTGGAAC+TGG	-	chr6.1:74226742-74226761	MS.gene98856:CDS	45.0%
	AAGGAGAAAATTCCTGGCAC+TGG	-	chr6.1:74226589-74226608	MS.gene98856:CDS	45.0%
	AAGGAGAAGATTCCTGGAAC+TGG	-	chr6.1:74226736-74226755	MS.gene98856:CDS	45.0%
	AAGGAGAAGATTCCTGGTAC+TGG	-	chr6.1:74226931-74226950	MS.gene98856:intron	45.0%
	AAGGTGGTGATCAAACTGGT+AGG	-	chr6.1:74226083-74226102	MS.gene98856:CDS	45.0%
	ACATGATAACAGAGGGGTAG+TGG	-	chr6.1:74226558-74226577	MS.gene98856:CDS	45.0%
	ACTGGATCATGTACTGGACA+TGG	-	chr6.1:74227183-74227202	MS.gene98856:CDS	45.0%
	AGGAGCTGTGGACAAGATTA+AGG	-	chr6.1:74226912-74226931	MS.gene98856:intron	45.0%
	AGGTGGTGATCAAACTGGTA+GGG	-	chr6.1:74226084-74226103	MS.gene98856:CDS	45.0%
	CAACAAGGTGGTGATCAAAC+TGG	-	chr6.1:74226079-74226098	MS.gene98856:CDS	45.0%
	CATGGACATGGAACAACTAC+TGG	-	chr6.1:74227048-74227067	MS.gene98856:CDS	45.0%
	GATATTGATGGAACCGGGTA+TGG	-	chr6.1:74226481-74226500	MS.gene98856:CDS	45.0%
	GATGTTGGTCATGGAACAAC+TGG	-	chr6.1:74226859-74226878	MS.gene98856:intron	45.0%
	GGAACTGGACATGATAACAG+AGG	-	chr6.1:74226550-74226569	MS.gene98856:CDS	45.0%
	GGACACCATCAACAACATCA+TGG	-	chr6.1:74226199-74226218	MS.gene98856:intron	45.0%
	GGTCATGGAACAACTGGTTA+TGG	-	chr6.1:74226781-74226800	MS.gene98856:CDS	45.0%
	GGTTATGGTGATACTGGTGT+TGG	-	chr6.1:74226649-74226668	MS.gene98856:CDS	45.0%
	TATGGCAATCCCATTAGTGG+TGG	-	chr6.1:74226151-74226170	MS.gene98856:CDS	45.0%
	TGGAGATAATAGAGGAGCTG+TGG	-	chr6.1:74226900-74226919	MS.gene98856:intron	45.0%
!	AAAATTCCTGGCACTGGAAC+TGG	-	chr6.1:74226595-74226614	MS.gene98856:CDS	45.0%
!	CATGGAACAACTACTGGCTA+TGG	-	chr6.1:74227054-74227073	MS.gene98856:CDS	45.0%
!	TCTAATGCAGGTGGTGGTTA+TGG	-	chr6.1:74226451-74226470	MS.gene98856:CDS	45.0%
!!	ACAACTGGTTATGGTGCTAC+TGG	-	chr6.1:74226790-74226809	MS.gene98856:CDS	45.0%
!!	AGGGGTAGTGGACAAGATTA+AGG	-	chr6.1:74226570-74226589	MS.gene98856:CDS	45.0%
!!	GGTGTTGGTCATCAACAACA+TGG	-	chr6.1:74226685-74226704	MS.gene98856:CDS	45.0%
!!	GGTTATGGTGCTACTGATGT+TGG	-	chr6.1:74226844-74226863	MS.gene98856:intron	45.0%
!!	TGGAGAAAATAGAGGCGTTG+TGG	-	chr6.1:74226705-74226724	MS.gene98856:CDS	45.0%
	ACAGGAACAGGAACAGGAAC+AGG	-	chr6.1:74226970-74226989	MS.gene98856:intron	50.0%
	ACAGGAACAGGAACAGGAAC+TGG	-	chr6.1:74226970-74226989	MS.gene98856:intron	50.0%
	ACAGGAACAGGAACTGGACA+TGG	-	chr6.1:74226982-74227001	MS.gene98856:intron	50.0%
	ACAGGAACTGGACATGGACA+TGG	-	chr6.1:74227036-74227055	MS.gene98856:CDS	50.0%
	ACAGGATATGGAGCACACAC+TGG	-	chr6.1:74226229-74226248	MS.gene98856:intron	50.0%
	ACTGGAACTGGAACAGGTCA+TGG	-	chr6.1:74226766-74226785	MS.gene98856:CDS	50.0%
	ACTGGAACTGGAACTGGAAC+AGG	-	chr6.1:74226607-74226626	MS.gene98856:CDS	50.0%
	ACTGGAACTGGAACTGGAAC+TGG	-	chr6.1:74226607-74226626	MS.gene98856:CDS	50.0%
	AGTCATCCCACCACCACTAA+TGG	+	chr6.1:74226164-74226183	None:intergenic	50.0%
	ATGGAACCGGGTATGGTACA+GGG	-	chr6.1:74226488-74226507	MS.gene98856:CDS	50.0%
	ATGGAGCACACACTGGTAGT+GGG	-	chr6.1:74226236-74226255	MS.gene98856:intron	50.0%
	CAGGAACAGGAACTGGACAT+GGG	-	chr6.1:74226983-74227002	MS.gene98856:intron	50.0%
	CCAGTACATGATCCAGTACC+AGG	+	chr6.1:74227180-74227199	None:intergenic	50.0%
	GCAATCCCATTAGTGGTGGT+GGG	-	chr6.1:74226155-74226174	MS.gene98856:CDS	50.0%
	GGAACAGGTCATGGAACAAC+TGG	-	chr6.1:74226775-74226794	MS.gene98856:CDS	50.0%
	GGACATGATGAGCAACACCT+TGG	-	chr6.1:74227114-74227133	MS.gene98856:CDS	50.0%
	GGTCAAGGAACAACTGGTGT+TGG	-	chr6.1:74226670-74226689	MS.gene98856:CDS	50.0%
	GGTCATGGAACAACTGGTGT+TGG	-	chr6.1:74226865-74226884	MS.gene98856:intron	50.0%
	GGTCGTGGAACAACTGGTTA+TGG	-	chr6.1:74226634-74226653	MS.gene98856:CDS	50.0%
	GTCATCCCACCACCACTAAT+GGG	+	chr6.1:74226163-74226182	None:intergenic	50.0%
	TATGGAAACCCCTTGAGCCA+AGG	-	chr6.1:74226115-74226134	MS.gene98856:CDS	50.0%
	TATGGAGCACACACTGGTAG+TGG	-	chr6.1:74226235-74226254	MS.gene98856:intron	50.0%
	TATGGGACAGGAACAGGAAC+AGG	-	chr6.1:74226964-74226983	MS.gene98856:intron	50.0%
	TATGGTACAGGGACAGGAAC+CGG	-	chr6.1:74226499-74226518	MS.gene98856:CDS	50.0%
!	AATGCAGGTGGTGGTTATGG+AGG	-	chr6.1:74226454-74226473	MS.gene98856:CDS	50.0%
!	ACTACTGGCTATGGAAGCAC+TGG	-	chr6.1:74227063-74227082	MS.gene98856:CDS	50.0%
!	AGGCGTTGTGGACAAGATCA+AGG	-	chr6.1:74226717-74226736	MS.gene98856:CDS	50.0%
!	CCTGGTACTGGATCATGTAC+TGG	-	chr6.1:74227177-74227196	MS.gene98856:CDS	50.0%
!!	ATCAACTTGGCCTTGGCTCA+AGG	+	chr6.1:74226128-74226147	None:intergenic	50.0%
!!	ATGACTGGTGCTACTGGTCA+TGG	-	chr6.1:74226178-74226197	MS.gene98856:intron	50.0%
!!	ATTAGTGGTGGTGGGATGAC+TGG	-	chr6.1:74226163-74226182	MS.gene98856:CDS	50.0%
!!	GGAAGCACTGGACAAGAGTA+TGG	-	chr6.1:74227075-74227094	MS.gene98856:CDS	50.0%
!!	GGTGATACTGGTGTTGGTCA+AGG	-	chr6.1:74226655-74226674	MS.gene98856:CDS	50.0%
!!	GGTGCTACTGATGTTGGTCA+TGG	-	chr6.1:74226850-74226869	MS.gene98856:intron	50.0%
!!	GGTGTTGGTCAAGGAACAAC+TGG	-	chr6.1:74226664-74226683	MS.gene98856:CDS	50.0%
!!	GGTTATGGTGCTACTGGAAC+TGG	-	chr6.1:74226796-74226815	MS.gene98856:CDS	50.0%
!!	TCAACTTGGCCTTGGCTCAA+GGG	+	chr6.1:74226127-74226146	None:intergenic	50.0%
	ACAACCGGCTATGGAGCTAC+AGG	-	chr6.1:74226523-74226542	MS.gene98856:CDS	55.0%
	ACAGGAACTGGACATGGGAC+AGG	-	chr6.1:74226988-74227007	MS.gene98856:intron	55.0%
	ACTGGAACTGGAACAGGTCG+TGG	-	chr6.1:74226619-74226638	MS.gene98856:CDS	55.0%
	ACTGGACATGGGACAGGAAC+AGG	-	chr6.1:74226994-74227013	MS.gene98856:intron	55.0%
	AGCTCCATAGCCGGTTGTTC+CGG	+	chr6.1:74226521-74226540	None:intergenic	55.0%
	CATGGGACAGGAACAGGAAC+TGG	-	chr6.1:74227000-74227019	MS.gene98856:intron	55.0%
	CCAGTTCCAGTTCCAGTTCC+AGG	+	chr6.1:74226610-74226629	None:intergenic	55.0%
	CCTGGAACTGGAACTGGAAC+TGG	-	chr6.1:74226748-74226767	MS.gene98856:CDS	55.0%
	GATGGAACCGGGTATGGTAC+AGG	-	chr6.1:74226487-74226506	MS.gene98856:CDS	55.0%
	GGAACAGGTCGTGGAACAAC+TGG	-	chr6.1:74226628-74226647	MS.gene98856:CDS	55.0%
	GGCAATCCCATTAGTGGTGG+TGG	-	chr6.1:74226154-74226173	MS.gene98856:CDS	55.0%
	TCCTGTCCCTGTACCATACC+CGG	+	chr6.1:74226497-74226516	None:intergenic	55.0%
!	TGGAGCACACACTGGTAGTG+GGG	-	chr6.1:74226237-74226256	MS.gene98856:intron	55.0%
!!	CAACTTGGCCTTGGCTCAAG+GGG	+	chr6.1:74226126-74226145	None:intergenic	55.0%
!!	GGTGCTACTGGAACTGGAAC+TGG	-	chr6.1:74226802-74226821	MS.gene98856:CDS	55.0%
	ACCGGCTATGGAGCTACAGG+TGG	-	chr6.1:74226526-74226545	MS.gene98856:CDS	60.0%
	ACCGGGTATGGTACAGGGAC+AGG	-	chr6.1:74226493-74226512	MS.gene98856:CDS	60.0%
	CCAGTTCCAGTTCCAGTGCC+AGG	+	chr6.1:74226604-74226623	None:intergenic	60.0%
	GCCACCTGTAGCTCCATAGC+CGG	+	chr6.1:74226530-74226549	None:intergenic	60.0%
	GGAACCGGAACAACCGGCTA+TGG	-	chr6.1:74226514-74226533	MS.gene98856:CDS	60.0%
	GGCTATGGAGCTACAGGTGG+CGG	-	chr6.1:74226529-74226548	MS.gene98856:CDS	60.0%
	GGGACAGGAACCGGAACAAC+CGG	-	chr6.1:74226508-74226527	MS.gene98856:CDS	60.0%
!	CCTGGCACTGGAACTGGAAC+TGG	-	chr6.1:74226601-74226620	MS.gene98856:CDS	60.0%
!!	AGCACACACTGGTAGTGGGG+GGG	-	chr6.1:74226240-74226259	MS.gene98856:intron	60.0%
!!	GAGCACACACTGGTAGTGGG+GGG	-	chr6.1:74226239-74226258	MS.gene98856:intron	60.0%
!!	GGAGCACACACTGGTAGTGG+GGG	-	chr6.1:74226238-74226257	MS.gene98856:intron	60.0%
!!	GGTGGGATGACTGGTGCTAC+TGG	-	chr6.1:74226172-74226191	MS.gene98856:intron	60.0%
!!	GGAGCTACAGGTGGCGGAAC+TGG	-	chr6.1:74226535-74226554	MS.gene98856:CDS	65.0%
!!	GGTAGTGGGGGGGCTCCCAC+AGG	-	chr6.1:74226250-74226269	MS.gene98856:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.1	gene	74226067	74227221	74226067	ID=MS.gene98856
chr6.1	mRNA	74226067	74227221	74226067	ID=MS.gene98856.t1;Parent=MS.gene98856
chr6.1	exon	74227017	74227221	74227017	ID=MS.gene98856.t1.exon1;Parent=MS.gene98856.t1
chr6.1	CDS	74227017	74227221	74227017	ID=cds.MS.gene98856.t1;Parent=MS.gene98856.t1
chr6.1	exon	74226342	74226827	74226342	ID=MS.gene98856.t1.exon2;Parent=MS.gene98856.t1
chr6.1	CDS	74226342	74226827	74226342	ID=cds.MS.gene98856.t1;Parent=MS.gene98856.t1
chr6.1	exon	74226067	74226185	74226067	ID=MS.gene98856.t1.exon3;Parent=MS.gene98856.t1
chr6.1	CDS	74226067	74226185	74226067	ID=cds.MS.gene98856.t1;Parent=MS.gene98856.t1

Gene Sequence

>MS.gene98856

ATGTCTCAATATCAACAAGGTGGTGATCAAACTGGTAGGGTTGATGAATATGGAAACCCCTTGAGCCAAGGCCAAGTTGATCAATATGGCAATCCCATTAGTGGTGGTGGGATGACTGGTGCTACTGGTCATGGACACCATCAACAACATCATGGAGTTGATACAGGATATGGAGCACACACTGGTAGTGGGGGGGCTCCCACAGGTAACTAATTAGTCTAAGTAATTAAGCTAGATTAATTTTACTAGCTCTCGATATTTTTGTGTCTAATATTTTTGTGTCTGACTGAAGCATGGATATGAAACTTTTTTTTTTCTTTTCAAATTCAAATGATTATCGGTGTTGACGAGTGAGTGTTACATAATTAACTTCAATGTTTTATATCTAATGCAGGTGGTGGTTATGGAGGCAATGATATTGATGGAACCGGGTATGGTACAGGGACAGGAACCGGAACAACCGGCTATGGAGCTACAGGTGGCGGAACTGGACATGATAACAGAGGGGTAGTGGACAAGATTAAGGAGAAAATTCCTGGCACTGGAACTGGAACTGGAACTGGAACAGGTCGTGGAACAACTGGTTATGGTGATACTGGTGTTGGTCAAGGAACAACTGGTGTTGGTCATCAACAACATGGAGAAAATAGAGGCGTTGTGGACAAGATCAAGGAGAAGATTCCTGGAACTGGAACTGGAACTGGAACTGGAACAGGTCATGGAACAACTGGTTATGGTGCTACTGGAACTGGAACTGGAACAGGTCATGGAACAACTGGTTATGGTGCTACTGATGTTGGTCATGGAACAACTGGTGTTGGTCATCAACAACATGGAGATAATAGAGGAGCTGTGGACAAGATTAAGGAGAAGATTCCTGGTACTGAACAAAATATTTATGGGACAGGAACAGGAACAGGAACAGGAACTGGACATGGGACAGGAACAGGAACTGGACATGGGACAGGAACAGGAACTGGACATGGACATGGAACAACTACTGGCTATGGAAGCACTGGACAAGAGTATGGAAAAGAGGGTCATCATGGACATGATGAGCAACACCTTGGTGAGAAAAAAGGGATTATGGAAAAAATTAAGGAGAAGATTCCTGGTACTGGATCATGTACTGGACATGGACAAACTAAACCATAA

Protein sequence

>MS.gene98856.t1

MSQYQQGGDQTGRVDEYGNPLSQGQVDQYGNPISGGGMTGATGHGHHQQHHGVDTGYGAHTGSGGAPTGGGYGGNDIDGTGYGTGTGTGTTGYGATGGGTGHDNRGVVDKIKEKIPGTGTGTGTGTGRGTTGYGDTGVGQGTTGVGHQQHGENRGVVDKIKEKIPGTGTGTGTGTGHGTTGYGATGTGTGTGHGTTGYGATDVGHGTTGVGHQQHGDNRGAVDKIKEKIPEGHHGHDEQHLGEKKGIMEKIKEKIPGTGSCTGHGQTKP