Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99345.t1 | XP_003606194.2 | 91.7 | 504 | 36 | 1 | 1 | 498 | 112 | 615 | 5.40E-261 | 909.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99345.t1 | F4HVY0 | 53.0 | 509 | 227 | 3 | 2 | 498 | 116 | 624 | 2.2e-154 | 547.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99345.t1 | G7JJQ1 | 91.7 | 504 | 36 | 1 | 1 | 498 | 112 | 615 | 3.9e-261 | 909.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049563 | MS.gene99345 | 0.821585 | 3.73E-53 | -1.69E-46 |
| MS.gene051544 | MS.gene99345 | 0.804541 | 2.06E-49 | -1.69E-46 |
| MS.gene052698 | MS.gene99345 | 0.806096 | 9.71E-50 | -1.69E-46 |
| MS.gene053356 | MS.gene99345 | 0.809495 | 1.84E-50 | -1.69E-46 |
| MS.gene058426 | MS.gene99345 | 0.808419 | 3.13E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99345.t1 | MTR_4g054290 | 91.667 | 504 | 36 | 1 | 1 | 498 | 112 | 615 | 0.0 | 933 |
| MS.gene99345.t1 | MTR_4g054150 | 86.310 | 504 | 42 | 2 | 1 | 498 | 112 | 594 | 0.0 | 879 |
| MS.gene99345.t1 | MTR_7g090140 | 80.080 | 502 | 93 | 2 | 1 | 496 | 17 | 517 | 0.0 | 822 |
| MS.gene99345.t1 | MTR_7g090140 | 80.080 | 502 | 93 | 2 | 1 | 496 | 112 | 612 | 0.0 | 820 |
| MS.gene99345.t1 | MTR_7g090100 | 79.840 | 501 | 93 | 2 | 1 | 495 | 112 | 610 | 0.0 | 814 |
| MS.gene99345.t1 | MTR_7g090120 | 78.443 | 501 | 102 | 1 | 1 | 495 | 112 | 612 | 0.0 | 803 |
| MS.gene99345.t1 | MTR_8g009560 | 63.710 | 496 | 173 | 2 | 8 | 496 | 122 | 617 | 0.0 | 619 |
| MS.gene99345.t1 | MTR_8g009590 | 58.929 | 504 | 199 | 3 | 2 | 497 | 152 | 655 | 0.0 | 612 |
| MS.gene99345.t1 | MTR_4g129630 | 32.874 | 508 | 324 | 5 | 4 | 494 | 117 | 624 | 2.07e-88 | 284 |
| MS.gene99345.t1 | MTR_4g054320 | 90.909 | 55 | 5 | 0 | 444 | 498 | 43 | 97 | 1.24e-31 | 117 |
| MS.gene99345.t1 | MTR_8g009550 | 62.162 | 74 | 25 | 1 | 59 | 132 | 17 | 87 | 1.53e-21 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99345.t1 | AT1G02205 | 53.635 | 509 | 224 | 3 | 2 | 498 | 117 | 625 | 0.0 | 550 |
| MS.gene99345.t1 | AT1G02190 | 56.832 | 505 | 204 | 8 | 2 | 494 | 116 | 618 | 0.0 | 549 |
| MS.gene99345.t1 | AT1G02205 | 53.635 | 509 | 224 | 3 | 2 | 498 | 116 | 624 | 0.0 | 549 |
| MS.gene99345.t1 | AT1G02190 | 56.778 | 509 | 202 | 9 | 2 | 494 | 116 | 622 | 0.0 | 549 |
| MS.gene99345.t1 | AT1G02205 | 53.113 | 514 | 224 | 3 | 2 | 498 | 116 | 629 | 0.0 | 546 |
| MS.gene99345.t1 | AT2G37700 | 54.724 | 508 | 219 | 4 | 2 | 498 | 112 | 619 | 0.0 | 540 |
| MS.gene99345.t1 | AT2G37700 | 54.043 | 507 | 215 | 4 | 2 | 498 | 112 | 610 | 0.0 | 533 |
| MS.gene99345.t1 | AT1G02205 | 50.110 | 453 | 214 | 3 | 58 | 498 | 8 | 460 | 2.40e-165 | 476 |
| MS.gene99345.t1 | AT2G37700 | 50.591 | 508 | 203 | 7 | 2 | 498 | 112 | 582 | 7.77e-163 | 474 |
| MS.gene99345.t1 | AT2G37700 | 57.064 | 361 | 148 | 2 | 2 | 355 | 112 | 472 | 1.52e-133 | 396 |
| MS.gene99345.t1 | AT1G02205 | 47.354 | 378 | 187 | 3 | 133 | 498 | 8 | 385 | 1.10e-130 | 384 |
| MS.gene99345.t1 | AT5G57800 | 34.252 | 508 | 316 | 6 | 1 | 490 | 116 | 623 | 1.06e-88 | 285 |
Find 102 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTATATATGACTACATTTA+TGG | 0.133350 | 4.1:+44309630 | MS.gene99345:CDS |
| TTTGGAGGAAAATGAGAAAA+AGG | 0.243101 | 4.1:-44311896 | None:intergenic |
| CCAAACTTGTCTGATTAGTT+TGG | 0.262919 | 4.1:-44313092 | None:intergenic |
| AAGTAGGAGAAGAGTTTCTT+AGG | 0.273284 | 4.1:-44309116 | None:intergenic |
| TATTTGACATTGAGAAAGTA+TGG | 0.287267 | 4.1:+44313030 | MS.gene99345:CDS |
| AGCATAGAGCACGTTGAAAA+AGG | 0.296954 | 4.1:-44309834 | None:intergenic |
| CCAACCCTCAAACATCTAAA+TGG | 0.316593 | 4.1:+44309793 | MS.gene99345:CDS |
| ACAACTTTAATCTTCAGATT+TGG | 0.323949 | 4.1:-44310372 | None:intergenic |
| AATAGGTGACTGTATTATAT+AGG | 0.334955 | 4.1:+44310897 | MS.gene99345:intron |
| ACTCAGGGGCAAGTTTAATA+AGG | 0.340636 | 4.1:+44310461 | MS.gene99345:CDS |
| AGCACTTGATTGGTCCCTTT+GGG | 0.349623 | 4.1:-44310438 | None:intergenic |
| ATGAACATTCCATCCTTCTA+AGG | 0.364125 | 4.1:-44312991 | None:intergenic |
| CAAGTTTAATAAGGTTGCTT+TGG | 0.369770 | 4.1:+44310470 | MS.gene99345:CDS |
| TAGCACTTGATTGGTCCCTT+TGG | 0.383431 | 4.1:-44310439 | None:intergenic |
| TTAACCTTTGGAGTATTGAT+TGG | 0.387155 | 4.1:-44310980 | None:intergenic |
| ATGAGTGCTTGGCGCATTGC+TGG | 0.389012 | 4.1:+44312957 | MS.gene99345:CDS |
| GCCCCTGAGTAGCACTTGAT+TGG | 0.390520 | 4.1:-44310448 | None:intergenic |
| TGTATGTGAAATACTTCAAT+TGG | 0.395814 | 4.1:-44309142 | None:intergenic |
| CGCTGCATCACACAAAATTT+AGG | 0.401705 | 4.1:+44309586 | MS.gene99345:CDS |
| TGTTTGAGGGTTGGAGGCTA+AGG | 0.409276 | 4.1:-44309784 | None:intergenic |
| CAAGCACTCATGACTCTTGT+TGG | 0.415005 | 4.1:-44312945 | None:intergenic |
| GGAATAGTTCATGCCTTAGA+AGG | 0.416100 | 4.1:+44312978 | MS.gene99345:CDS |
| CCATCTTTCAACTACGCTTA+GGG | 0.416116 | 4.1:+44309754 | MS.gene99345:CDS |
| CCATAAATGTAGTCATATAT+AGG | 0.417569 | 4.1:-44309630 | None:intergenic |
| TCCATCTTTCAACTACGCTT+AGG | 0.422294 | 4.1:+44309753 | MS.gene99345:CDS |
| ATAGGTGACTGTATTATATA+GGG | 0.422701 | 4.1:+44310898 | MS.gene99345:intron |
| TATGCCAACATTTCAGCAAA+TGG | 0.424110 | 4.1:-44308963 | None:intergenic |
| TGAACAATGTTGTCAACATT+GGG | 0.427233 | 4.1:-44309004 | None:intergenic |
| CTGAAGATTAAAGTTGTAGA+TGG | 0.439460 | 4.1:+44310378 | MS.gene99345:CDS |
| ATGAACAATGTTGTCAACAT+TGG | 0.446199 | 4.1:-44309005 | None:intergenic |
| CCTCCAAATAAAATGCGAAA+AGG | 0.450420 | 4.1:+44311911 | MS.gene99345:CDS |
| TATGGTTAGTTGGAGATGAA+TGG | 0.456856 | 4.1:+44311828 | MS.gene99345:CDS |
| GGACCAATCAAGTGCTACTC+AGG | 0.458366 | 4.1:+44310445 | MS.gene99345:CDS |
| CTTACAGCTCTCTTGCATGC+TGG | 0.459101 | 4.1:+44308710 | MS.gene99345:CDS |
| TGTGTTAAGTGCACCACATC+TGG | 0.460275 | 4.1:-44309714 | None:intergenic |
| GATTAGTTTGGAATCTTAAG+AGG | 0.464881 | 4.1:-44313080 | None:intergenic |
| AGGTACCATTTAGATGTTTG+AGG | 0.465285 | 4.1:-44309798 | None:intergenic |
| CAGTGGAATTCTTGTACTAC+TGG | 0.467990 | 4.1:+44308735 | MS.gene99345:CDS |
| CCCTAAGCGTAGTTGAAAGA+TGG | 0.468595 | 4.1:-44309754 | None:intergenic |
| CGCCATGTCCAATGGAAGCT+TGG | 0.474471 | 4.1:+44310949 | MS.gene99345:CDS |
| GCAGTAGGACTTATCATTGA+TGG | 0.477322 | 4.1:-44311953 | None:intergenic |
| GGTACCATTTAGATGTTTGA+GGG | 0.478371 | 4.1:-44309797 | None:intergenic |
| ACCACATCTGGTGATTCCTC+TGG | 0.483089 | 4.1:-44309702 | None:intergenic |
| ATCTAACAGATATGGTTAGT+TGG | 0.485488 | 4.1:+44311818 | MS.gene99345:intron |
| CCATTTAGATGTTTGAGGGT+TGG | 0.485770 | 4.1:-44309793 | None:intergenic |
| TTTAGATGTTTGAGGGTTGG+AGG | 0.486191 | 4.1:-44309790 | None:intergenic |
| ATACTTCAATTGGGGAAAGT+AGG | 0.487785 | 4.1:-44309132 | None:intergenic |
| TGCTTGTGACTTGGATTAGT+GGG | 0.489293 | 4.1:+44309853 | MS.gene99345:CDS |
| TTCCAACCTCACACGAATGC+AGG | 0.490503 | 4.1:-44311985 | None:intergenic |
| CGTGCTCTATGCTTGTGACT+TGG | 0.492557 | 4.1:+44309844 | MS.gene99345:CDS |
| ATGCTTGTGACTTGGATTAG+TGG | 0.496658 | 4.1:+44309852 | MS.gene99345:CDS |
| AAGATCTCAAGCTGCAGTGT+TGG | 0.498853 | 4.1:+44309907 | MS.gene99345:CDS |
| ATGGTTAGTTGGAGATGAAT+GGG | 0.501106 | 4.1:+44311829 | MS.gene99345:CDS |
| GAAGTTACTTTCTAAAACAA+TGG | 0.502211 | 4.1:-44309880 | None:intergenic |
| AGTTTGGAATCTTAAGAGGT+AGG | 0.503572 | 4.1:-44313076 | None:intergenic |
| TGATAGAGCCAAGCTTCCAT+TGG | 0.508550 | 4.1:-44310957 | None:intergenic |
| TCGTTTGTGGCTGCACTGTA+TGG | 0.516902 | 4.1:+44309035 | MS.gene99345:CDS |
| CAACAAGAGTCATGAGTGCT+TGG | 0.516934 | 4.1:+44312946 | MS.gene99345:CDS |
| GCAGCATAAAGCATTAGTAA+TGG | 0.519657 | 4.1:-44310493 | None:intergenic |
| GTATGTGAAATACTTCAATT+GGG | 0.520031 | 4.1:-44309141 | None:intergenic |
| TTGAAGAATGATGGTGAGAA+TGG | 0.522722 | 4.1:-44308799 | None:intergenic |
| GGAGTAAAGGTGATAAGTCT+AGG | 0.524556 | 4.1:+44310130 | MS.gene99345:CDS |
| AGCTGAAAGAGCTTGAACGA+AGG | 0.524659 | 4.1:+44310924 | MS.gene99345:CDS |
| CGAAGGGTCGCCATGTCCAA+TGG | 0.526318 | 4.1:+44310941 | MS.gene99345:CDS |
| TTATCATTGATGGTGTATAG+TGG | 0.533673 | 4.1:-44311943 | None:intergenic |
| TGTTCTCCACCATTGTAAGT+TGG | 0.536824 | 4.1:-44308675 | None:intergenic |
| ACTGCGCAGTTTATATTGAA+AGG | 0.537435 | 4.1:+44310346 | MS.gene99345:CDS |
| CTATGGCTGCCAACTTACAA+TGG | 0.545118 | 4.1:+44308666 | None:intergenic |
| TAGTTCATGCCTTAGAAGGA+TGG | 0.550562 | 4.1:+44312982 | MS.gene99345:CDS |
| TGCTTAACAACATTCCCAAA+GGG | 0.556459 | 4.1:+44310424 | MS.gene99345:CDS |
| ATTGTCACTGAGCCTATCAC+TGG | 0.557450 | 4.1:+44308821 | MS.gene99345:CDS |
| GGCTGATTTAAGTGGAGTAA+AGG | 0.558217 | 4.1:+44310117 | MS.gene99345:CDS |
| ACATCCATTTGCTGAAATGT+TGG | 0.559199 | 4.1:+44308959 | MS.gene99345:CDS |
| GAGCAAATGCAAGCATCAGA+AGG | 0.559545 | 4.1:+44311860 | MS.gene99345:CDS |
| GCTGAAAGAGCTTGAACGAA+GGG | 0.563864 | 4.1:+44310925 | MS.gene99345:CDS |
| AGCTTCATATGTAGCATCTG+AGG | 0.581755 | 4.1:-44309667 | None:intergenic |
| CAGTGACAATTGAAGAATGA+TGG | 0.584374 | 4.1:-44308808 | None:intergenic |
| ATTTGACATTGAGAAAGTAT+GGG | 0.587113 | 4.1:+44313031 | MS.gene99345:CDS |
| CATTGTAAGTTGGCAGCCAT+AGG | 0.587199 | 4.1:-44308665 | None:intergenic |
| CAGTAGTACAAGAATTCCAC+TGG | 0.588431 | 4.1:-44308734 | None:intergenic |
| GACCAATCAAGTGCTACTCA+GGG | 0.596465 | 4.1:+44310446 | MS.gene99345:CDS |
| AATGGTACCTCAATTTAATG+TGG | 0.603244 | 4.1:+44309811 | MS.gene99345:CDS |
| ATAATGATGGCTGATTTAAG+TGG | 0.604119 | 4.1:+44310109 | MS.gene99345:CDS |
| TCTCTTGCATGCTGGACCAG+TGG | 0.604144 | 4.1:+44308718 | MS.gene99345:CDS |
| ATCACCAATCAATACTCCAA+AGG | 0.614842 | 4.1:+44310976 | MS.gene99345:CDS |
| GATTGAAGAGACAATAATGA+TGG | 0.615276 | 4.1:+44310096 | MS.gene99345:CDS |
| TTACAATGGTGGAGAACAGA+TGG | 0.615918 | 4.1:+44308680 | MS.gene99345:CDS |
| AGCCAAGCTTCCATTGGACA+TGG | 0.622774 | 4.1:-44310951 | None:intergenic |
| TGCAGGTTTATGACTGCAGT+AGG | 0.623460 | 4.1:-44311968 | None:intergenic |
| ACCAGAGGAATCACCAGATG+TGG | 0.626932 | 4.1:+44309701 | MS.gene99345:CDS |
| GGATGGAATGTTCATGAGTG+TGG | 0.632339 | 4.1:+44312999 | MS.gene99345:CDS |
| TGGCTGCCAACTTACAATGG+TGG | 0.632530 | 4.1:+44308669 | MS.gene99345:CDS |
| TCTTAAGAGGTAGGTAACCA+TGG | 0.633958 | 4.1:-44313067 | None:intergenic |
| CATAAACCTGCATTCGTGTG+AGG | 0.635395 | 4.1:+44311979 | MS.gene99345:CDS |
| GTGCTTAACAACATTCCCAA+AGG | 0.636164 | 4.1:+44310423 | MS.gene99345:CDS |
| AGCAAATGCAAGCATCAGAA+GGG | 0.638426 | 4.1:+44311861 | MS.gene99345:CDS |
| TCATTGATGGTGTATAGTGG+TGG | 0.657410 | 4.1:-44311940 | None:intergenic |
| TGGGAAGCAAGTATTCGCCA+TGG | 0.674366 | 4.1:+44313050 | MS.gene99345:CDS |
| TGACTACATTTATGGTACTG+TGG | 0.682689 | 4.1:+44309638 | MS.gene99345:CDS |
| ACCAATCAAGTGCTACTCAG+GGG | 0.695886 | 4.1:+44310447 | MS.gene99345:CDS |
| TATGTGAAATACTTCAATTG+GGG | 0.721848 | 4.1:-44309140 | None:intergenic |
| AGCTTGTGTGAAGAGACCAG+AGG | 0.773132 | 4.1:+44309686 | MS.gene99345:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr4.1:44311470-44311451 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr4.1:44311451-44311470 | MS.gene99345:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr4.1:44311469-44311450 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr4.1:44311450-44311469 | MS.gene99345:intron | 0.0% |
| !!! | TTTATTTTTTTATTTTTTTA+TGG | + | chr4.1:44309279-44309298 | MS.gene99345:intron | 0.0% |
| !!! | AAAGTTTAATTTTATTCTAA+TGG | + | chr4.1:44310861-44310880 | MS.gene99345:intron | 10.0% |
| !!! | TAATTTTTCCAATTATTTTA+GGG | + | chr4.1:44309200-44309219 | MS.gene99345:intron | 10.0% |
| !!! | TTAATTTTTCCAATTATTTT+AGG | + | chr4.1:44309199-44309218 | MS.gene99345:intron | 10.0% |
| !! | AACAATAAGTTTCTTATATT+AGG | - | chr4.1:44308908-44308927 | None:intergenic | 15.0% |
| !! | ACAATAAGTTTCTTATATTA+GGG | - | chr4.1:44308907-44308926 | None:intergenic | 15.0% |
| !! | ATATATATATAACAAAGAAG+AGG | - | chr4.1:44311441-44311460 | None:intergenic | 15.0% |
| !! | TAATATAAGAAACTTATTGT+TGG | + | chr4.1:44308907-44308926 | MS.gene99345:intron | 15.0% |
| !!! | AATCTTATCCTTTTTTTTTT+GGG | + | chr4.1:44312245-44312264 | MS.gene99345:intron | 15.0% |
| !!! | AATTTTTCCAATTATTTTAG+GGG | + | chr4.1:44309201-44309220 | MS.gene99345:intron | 15.0% |
| !!! | ATTCTTCTTAATACAATTTT+TGG | - | chr4.1:44310751-44310770 | None:intergenic | 15.0% |
| !!! | TTATTTAATTTGAAATCAGA+GGG | + | chr4.1:44311299-44311318 | MS.gene99345:intron | 15.0% |
| !!! | TTCTTTATTGCATATTTTTA+TGG | + | chr4.1:44309501-44309520 | MS.gene99345:intron | 15.0% |
| !!! | TTTATTTAATTTGAAATCAG+AGG | + | chr4.1:44311298-44311317 | MS.gene99345:intron | 15.0% |
| !!! | TTTTTTATGGTGTTTATTTT+CGG | + | chr4.1:44309292-44309311 | MS.gene99345:intron | 15.0% |
| !! | AAAACACAAAAACAAGAAAA+TGG | - | chr4.1:44311359-44311378 | None:intergenic | 20.0% |
| !! | AAAAGTTCCAATACAAATAA+AGG | - | chr4.1:44308860-44308879 | None:intergenic | 20.0% |
| !! | AAACAGATAATACAAACTAA+AGG | - | chr4.1:44309339-44309358 | None:intergenic | 20.0% |
| !! | AAAGTTCCAATACAAATAAA+GGG | - | chr4.1:44308859-44308878 | None:intergenic | 20.0% |
| !! | AAGTTATATAAAAAACACCA+TGG | + | chr4.1:44311578-44311597 | MS.gene99345:intron | 20.0% |
| !! | AATATAAAGTTCGAAATTCA+TGG | - | chr4.1:44309972-44309991 | None:intergenic | 20.0% |
| !! | ATATAAAGTTCGAAATTCAT+GGG | - | chr4.1:44309971-44309990 | None:intergenic | 20.0% |
| !! | CAAAATATTAAACTATGAGA+AGG | + | chr4.1:44311077-44311096 | MS.gene99345:intron | 20.0% |
| !! | CATTATAAATCTAACAGATA+TGG | + | chr4.1:44311810-44311829 | MS.gene99345:intron | 20.0% |
| !! | TGAAACAATAAATTAACCTT+TGG | - | chr4.1:44310995-44311014 | None:intergenic | 20.0% |
| !! | TGTTAGAAATATGAAGTAAT+AGG | - | chr4.1:44311792-44311811 | None:intergenic | 20.0% |
| !! | TTTGTTGAAATGTTATTGAA+TGG | - | chr4.1:44312518-44312537 | None:intergenic | 20.0% |
| !!! | AATAATGCAATATTAGCTTA+AGG | - | chr4.1:44310636-44310655 | None:intergenic | 20.0% |
| !!! | ATAATGCAATATTAGCTTAA+GGG | - | chr4.1:44310635-44310654 | None:intergenic | 20.0% |
| !!! | ATCTTATCCTTTTTTTTTTG+GGG | + | chr4.1:44312246-44312265 | MS.gene99345:intron | 20.0% |
| !!! | ATTAAATTGTTGACTTGATT+TGG | + | chr4.1:44312395-44312414 | MS.gene99345:intron | 20.0% |
| !!! | ATTTTTAGTGTTGCAAAAAA+AGG | + | chr4.1:44312454-44312473 | MS.gene99345:intron | 20.0% |
| !!! | CAATCTTATCCTTTTTTTTT+TGG | + | chr4.1:44312244-44312263 | MS.gene99345:intron | 20.0% |
| !!! | TACAGAATCTTTTTTTTTTG+TGG | + | chr4.1:44312546-44312565 | MS.gene99345:intron | 20.0% |
| !!! | TGTATATAAAGCATTAGTAA+TGG | - | chr4.1:44310599-44310618 | None:intergenic | 20.0% |
| !!! | TTAAATTGTTGACTTGATTT+GGG | + | chr4.1:44312396-44312415 | MS.gene99345:intron | 20.0% |
| !!! | TTTAATTTAGCAAGCAATAT+GGG | + | chr4.1:44312212-44312231 | MS.gene99345:intron | 20.0% |
| !!! | TTTTATTCTCTATATCCATA+AGG | + | chr4.1:44309992-44310011 | MS.gene99345:intron | 20.0% |
| !!! | TTTTGCCCTATAATTTAAAA+AGG | + | chr4.1:44312039-44312058 | MS.gene99345:intron | 20.0% |
| !!! | TTTTTATGGTGTTTATTTTC+GGG | + | chr4.1:44309293-44309312 | MS.gene99345:intron | 20.0% |
| ! | AACCATCTAACTGAATTAAA+TGG | + | chr4.1:44310698-44310717 | MS.gene99345:intron | 25.0% |
| ! | AATAGGTGACTGTATTATAT+AGG | + | chr4.1:44310897-44310916 | MS.gene99345:intron | 25.0% |
| ! | ACAACTTTAATCTTCAGATT+TGG | - | chr4.1:44310375-44310394 | None:intergenic | 25.0% |
| ! | ACACCTTCATAAAAATTAGT+TGG | - | chr4.1:44311549-44311568 | None:intergenic | 25.0% |
| ! | ACCATCTAACTGAATTAAAT+GGG | + | chr4.1:44310699-44310718 | MS.gene99345:intron | 25.0% |
| ! | ATAGGTGACTGTATTATATA+GGG | + | chr4.1:44310898-44310917 | MS.gene99345:intron | 25.0% |
| ! | ATTACTCATACTTACCTATT+TGG | + | chr4.1:44312309-44312328 | MS.gene99345:intron | 25.0% |
| ! | CCATAAATGTAGTCATATAT+AGG | - | chr4.1:44309633-44309652 | None:intergenic | 25.0% |
| ! | CCTATATATGACTACATTTA+TGG | + | chr4.1:44309630-44309649 | MS.gene99345:CDS | 25.0% |
| ! | CTATTAATGTACAACAGAAT+TGG | + | chr4.1:44312919-44312938 | MS.gene99345:intron | 25.0% |
| ! | GAATAAACCCCAAAAAAAAA+AGG | - | chr4.1:44312256-44312275 | None:intergenic | 25.0% |
| ! | GGTTTACGAAAAATGTATAA+AGG | - | chr4.1:44308886-44308905 | None:intergenic | 25.0% |
| ! | GTATATATGTGTAACATTGA+GGG | + | chr4.1:44310269-44310288 | MS.gene99345:intron | 25.0% |
| ! | GTATGTGAAATACTTCAATT+GGG | - | chr4.1:44309144-44309163 | None:intergenic | 25.0% |
| ! | TATATAAAAAACACCATGGA+TGG | + | chr4.1:44311582-44311601 | MS.gene99345:intron | 25.0% |
| ! | TATGTGAAATACTTCAATTG+GGG | - | chr4.1:44309143-44309162 | None:intergenic | 25.0% |
| ! | TATTTGACATTGAGAAAGTA+TGG | + | chr4.1:44313030-44313049 | MS.gene99345:CDS | 25.0% |
| ! | TGTATATATGTGTAACATTG+AGG | + | chr4.1:44310268-44310287 | MS.gene99345:intron | 25.0% |
| ! | TGTATGTGAAATACTTCAAT+TGG | - | chr4.1:44309145-44309164 | None:intergenic | 25.0% |
| ! | TTATCTTCAAATTCCAATGA+AGG | - | chr4.1:44311020-44311039 | None:intergenic | 25.0% |
| ! | TTATTGTTTCAATCCTTCAT+TGG | + | chr4.1:44311004-44311023 | MS.gene99345:intron | 25.0% |
| !! | ACACCAACTAATTTTTATGA+AGG | + | chr4.1:44311543-44311562 | MS.gene99345:intron | 25.0% |
| !! | ACGATTTTATCACAAAACTT+TGG | + | chr4.1:44310199-44310218 | MS.gene99345:intron | 25.0% |
| !! | ATTTGACATTGAGAAAGTAT+GGG | + | chr4.1:44313031-44313050 | MS.gene99345:CDS | 25.0% |
| !! | CTCGACCTTTTTAAATTATA+GGG | - | chr4.1:44312047-44312066 | None:intergenic | 25.0% |
| !! | GTTTAATTTAGCAAGCAATA+TGG | + | chr4.1:44312211-44312230 | MS.gene99345:intron | 25.0% |
| !! | TAATGCAATATTAGCTTAAG+GGG | - | chr4.1:44310634-44310653 | None:intergenic | 25.0% |
| !! | TCTCGACCTTTTTAAATTAT+AGG | - | chr4.1:44312048-44312067 | None:intergenic | 25.0% |
| !! | TGCATTAAACATTTTGTACT+TGG | - | chr4.1:44310834-44310853 | None:intergenic | 25.0% |
| !!! | AATCTTTTTTTTTTGTGGTC+GGG | + | chr4.1:44312551-44312570 | MS.gene99345:intron | 25.0% |
| !!! | ATCGATTTTATGAACAACAT+GGG | + | chr4.1:44309071-44309090 | MS.gene99345:CDS | 25.0% |
| !!! | CATACAAAGTTTGATTTTAC+AGG | + | chr4.1:44309556-44309575 | MS.gene99345:intron | 25.0% |
| !!! | CATACTTGTGTTTTAAATCT+TGG | - | chr4.1:44309939-44309958 | None:intergenic | 25.0% |
| !!! | CTTTTTCCCTTTATTTGTAT+TGG | + | chr4.1:44308850-44308869 | MS.gene99345:intron | 25.0% |
| !!! | GAAGTTACTTTCTAAAACAA+TGG | - | chr4.1:44309883-44309902 | None:intergenic | 25.0% |
| !!! | GAATCTTTTTTTTTTGTGGT+CGG | + | chr4.1:44312550-44312569 | MS.gene99345:intron | 25.0% |
| !!! | TAAATTGTTGACTTGATTTG+GGG | + | chr4.1:44312397-44312416 | MS.gene99345:intron | 25.0% |
| AAAAAGGCCACATTAAATTG+AGG | - | chr4.1:44309821-44309840 | None:intergenic | 30.0% | |
| AAAAAGTTCATACCAGTGAT+AGG | - | chr4.1:44308836-44308855 | None:intergenic | 30.0% | |
| AAAGCAACCTTATTAGCTAA+TGG | - | chr4.1:44310574-44310593 | None:intergenic | 30.0% | |
| AAGCATTAGTAATGGCTTAA+GGG | - | chr4.1:44310548-44310567 | None:intergenic | 30.0% | |
| AATGGTACCTCAATTTAATG+TGG | + | chr4.1:44309811-44309830 | MS.gene99345:CDS | 30.0% | |
| AGTTAGATGGTTACTACAAT+AGG | - | chr4.1:44310690-44310709 | None:intergenic | 30.0% | |
| ATCTAACAGATATGGTTAGT+TGG | + | chr4.1:44311818-44311837 | MS.gene99345:intron | 30.0% | |
| ATGAAAGAGATGAATTTACC+TGG | - | chr4.1:44310165-44310184 | None:intergenic | 30.0% | |
| ATGAACAATGTTGTCAACAT+TGG | - | chr4.1:44309008-44309027 | None:intergenic | 30.0% | |
| ATGGAGAGTAAATTGCAAAT+AGG | + | chr4.1:44310880-44310899 | MS.gene99345:intron | 30.0% | |
| ATTAGCTAATAAGGTTGCTT+TGG | + | chr4.1:44310573-44310592 | MS.gene99345:intron | 30.0% | |
| CAAGTTTAATAAGGTTGCTT+TGG | + | chr4.1:44310470-44310489 | MS.gene99345:CDS | 30.0% | |
| CCAATCATATTTCACCAAAT+AGG | - | chr4.1:44312326-44312345 | None:intergenic | 30.0% | |
| CCCCTAACAAAAAAACAAAT+GGG | + | chr4.1:44312144-44312163 | MS.gene99345:intron | 30.0% | |
| CTGAAGATTAAAGTTGTAGA+TGG | + | chr4.1:44310378-44310397 | MS.gene99345:CDS | 30.0% | |
| GATATAAACCTTCGATTCAA+TGG | - | chr4.1:44312597-44312616 | None:intergenic | 30.0% | |
| GATTGAAGAGACAATAATGA+TGG | + | chr4.1:44310096-44310115 | MS.gene99345:CDS | 30.0% | |
| GTTAGATGGTTACTACAATA+GGG | - | chr4.1:44310689-44310708 | None:intergenic | 30.0% | |
| GTTCATGAAAAAATCGTTTG+TGG | + | chr4.1:44309022-44309041 | MS.gene99345:CDS | 30.0% | |
| GTTTGTATTATCTGTTTCAC+CGG | + | chr4.1:44309342-44309361 | MS.gene99345:intron | 30.0% | |
| TATATATATATGGGTCTTGC+TGG | + | chr4.1:44311462-44311481 | MS.gene99345:intron | 30.0% | |
| TCCCATTTAATTCAGTTAGA+TGG | - | chr4.1:44310703-44310722 | None:intergenic | 30.0% | |
| TGAACAATGTTGTCAACATT+GGG | - | chr4.1:44309007-44309026 | None:intergenic | 30.0% | |
| TTAAGCCATTACTAATGCTT+TGG | + | chr4.1:44310548-44310567 | MS.gene99345:intron | 30.0% | |
| TTTATGCTGCAAAAATGTAC+AGG | + | chr4.1:44310506-44310525 | MS.gene99345:CDS | 30.0% | |
| TTTGGAGGAAAATGAGAAAA+AGG | - | chr4.1:44311899-44311918 | None:intergenic | 30.0% | |
| ! | AAAGCATTAGTAATGGCTTA+AGG | - | chr4.1:44310549-44310568 | None:intergenic | 30.0% |
| ! | ACATTGAGGGTTTTCAAATT+TGG | + | chr4.1:44310282-44310301 | MS.gene99345:intron | 30.0% |
| ! | ATAATGATGGCTGATTTAAG+TGG | + | chr4.1:44310109-44310128 | MS.gene99345:CDS | 30.0% |
| ! | CAACCTTTTCGCATTTTATT+TGG | - | chr4.1:44311917-44311936 | None:intergenic | 30.0% |
| ! | CATTGAGGGTTTTCAAATTT+GGG | + | chr4.1:44310283-44310302 | MS.gene99345:intron | 30.0% |
| ! | CCTATTTGGTGAAATATGAT+TGG | + | chr4.1:44312323-44312342 | MS.gene99345:intron | 30.0% |
| !! | AAACTTATTGTTGGTGTTGT+TGG | + | chr4.1:44308916-44308935 | MS.gene99345:intron | 30.0% |
| !! | AAGCCAACCTATTTGTTATT+GGG | + | chr4.1:44312174-44312193 | MS.gene99345:intron | 30.0% |
| !! | TTAACCTTTGGAGTATTGAT+TGG | - | chr4.1:44310983-44311002 | None:intergenic | 30.0% |
| !! | TTATCATTGATGGTGTATAG+TGG | - | chr4.1:44311946-44311965 | None:intergenic | 30.0% |
| !! | TTTAATTTGAAATCAGAGGG+AGG | + | chr4.1:44311302-44311321 | MS.gene99345:intron | 30.0% |
| !!! | AGCCCATTTGTTTTTTTGTT+AGG | - | chr4.1:44312149-44312168 | None:intergenic | 30.0% |
| !!! | ATCTTTTTTTTTTGTGGTCG+GGG | + | chr4.1:44312552-44312571 | MS.gene99345:intron | 30.0% |
| !!! | CATCGATTTTATGAACAACA+TGG | + | chr4.1:44309070-44309089 | MS.gene99345:CDS | 30.0% |
| !!! | CCCATTTGTTTTTTTGTTAG+GGG | - | chr4.1:44312147-44312166 | None:intergenic | 30.0% |
| !!! | GCCCATTTGTTTTTTTGTTA+GGG | - | chr4.1:44312148-44312167 | None:intergenic | 30.0% |
| !!! | TTGTTGGTTTTTTATGACAG+CGG | + | chr4.1:44308932-44308951 | MS.gene99345:intron | 30.0% |
| AAGTAGGAGAAGAGTTTCTT+AGG | - | chr4.1:44309119-44309138 | None:intergenic | 35.0% | |
| ACAAAAAGCGAGAAACCAAA+CGG | - | chr4.1:44310035-44310054 | None:intergenic | 35.0% | |
| ACTGCGCAGTTTATATTGAA+AGG | + | chr4.1:44310346-44310365 | MS.gene99345:CDS | 35.0% | |
| AGAATCTACCATTGAATCGA+AGG | + | chr4.1:44312586-44312605 | MS.gene99345:intron | 35.0% | |
| AGGTACCATTTAGATGTTTG+AGG | - | chr4.1:44309801-44309820 | None:intergenic | 35.0% | |
| ATACTTCAATTGGGGAAAGT+AGG | - | chr4.1:44309135-44309154 | None:intergenic | 35.0% | |
| ATCACCAATCAATACTCCAA+AGG | + | chr4.1:44310976-44310995 | MS.gene99345:CDS | 35.0% | |
| ATGAACATTCCATCCTTCTA+AGG | - | chr4.1:44312994-44313013 | None:intergenic | 35.0% | |
| CACAAAAACAAGAAAATGGC+CGG | - | chr4.1:44311355-44311374 | None:intergenic | 35.0% | |
| CAGTGACAATTGAAGAATGA+TGG | - | chr4.1:44308811-44308830 | None:intergenic | 35.0% | |
| CATCCCAATAACAAATAGGT+TGG | - | chr4.1:44312180-44312199 | None:intergenic | 35.0% | |
| CCTCCAAATAAAATGCGAAA+AGG | + | chr4.1:44311911-44311930 | MS.gene99345:CDS | 35.0% | |
| GATAGAACTGTCAAATGAGA+TGG | + | chr4.1:44312099-44312118 | MS.gene99345:intron | 35.0% | |
| GCCCCTAACAAAAAAACAAA+TGG | + | chr4.1:44312143-44312162 | MS.gene99345:intron | 35.0% | |
| GGTACCATTTAGATGTTTGA+GGG | - | chr4.1:44309800-44309819 | None:intergenic | 35.0% | |
| GTTGTAATGCAAACTTACGA+TGG | - | chr4.1:44309170-44309189 | None:intergenic | 35.0% | |
| TACTCGGATTGAAGTTGTTT+GGG | + | chr4.1:44312429-44312448 | MS.gene99345:intron | 35.0% | |
| TATGCCAACATTTCAGCAAA+TGG | - | chr4.1:44308966-44308985 | None:intergenic | 35.0% | |
| TGACTACATTTATGGTACTG+TGG | + | chr4.1:44309638-44309657 | MS.gene99345:CDS | 35.0% | |
| TGCTTAACAACATTCCCAAA+GGG | + | chr4.1:44310424-44310443 | MS.gene99345:CDS | 35.0% | |
| TGTGCATCCCAATAACAAAT+AGG | - | chr4.1:44312184-44312203 | None:intergenic | 35.0% | |
| TTACTCGGATTGAAGTTGTT+TGG | + | chr4.1:44312428-44312447 | MS.gene99345:intron | 35.0% | |
| ! | AATGGCCAAAGCATTAGTAA+TGG | - | chr4.1:44310556-44310575 | None:intergenic | 35.0% |
| ! | ACATCCATTTGCTGAAATGT+TGG | + | chr4.1:44308959-44308978 | MS.gene99345:CDS | 35.0% |
| ! | AGCAAGCAATATGGGTTAAT+AGG | + | chr4.1:44312220-44312239 | MS.gene99345:intron | 35.0% |
| ! | AGTTTGGAATCTTAAGAGGT+AGG | - | chr4.1:44313079-44313098 | None:intergenic | 35.0% |
| ! | ATGGTTAGTTGGAGATGAAT+GGG | + | chr4.1:44311829-44311848 | MS.gene99345:CDS | 35.0% |
| ! | GCAGCATAAAGCATTAGTAA+TGG | - | chr4.1:44310496-44310515 | None:intergenic | 35.0% |
| ! | TATGGTTAGTTGGAGATGAA+TGG | + | chr4.1:44311828-44311847 | MS.gene99345:CDS | 35.0% |
| ! | TTGAAGAATGATGGTGAGAA+TGG | - | chr4.1:44308802-44308821 | None:intergenic | 35.0% |
| !! | AAACTAAAGGTACCCTATGT+AGG | - | chr4.1:44309326-44309345 | None:intergenic | 35.0% |
| !! | AAGTCTAGGACTTTTAAACC+AGG | + | chr4.1:44310144-44310163 | MS.gene99345:CDS | 35.0% |
| !! | CAAGCCAACCTATTTGTTAT+TGG | + | chr4.1:44312173-44312192 | MS.gene99345:intron | 35.0% |
| !! | CCTTTTCGCATTTTATTTGG+AGG | - | chr4.1:44311914-44311933 | None:intergenic | 35.0% |
| !! | GTTGTTGCTTGTTATCCTTA+TGG | - | chr4.1:44310010-44310029 | None:intergenic | 35.0% |
| !! | TTTGGGGTACTACTTTTACT+CGG | + | chr4.1:44312413-44312432 | MS.gene99345:intron | 35.0% |
| !!! | TTCCAATTATTTTAGGGGTG+TGG | + | chr4.1:44309206-44309225 | MS.gene99345:intron | 35.0% |
| !!! | TTTTTTTGTTAGGGGCCTTT+CGG | - | chr4.1:44312139-44312158 | None:intergenic | 35.0% |
| AAAGAAGAGGAAGCAGTTAG+AGG | - | chr4.1:44311428-44311447 | None:intergenic | 40.0% | |
| ACTCAGGGGCAAGTTTAATA+AGG | + | chr4.1:44310461-44310480 | MS.gene99345:CDS | 40.0% | |
| AGCAAATGCAAGCATCAGAA+GGG | + | chr4.1:44311861-44311880 | MS.gene99345:CDS | 40.0% | |
| AGCATAGAGCACGTTGAAAA+AGG | - | chr4.1:44309837-44309856 | None:intergenic | 40.0% | |
| AGCTTCATATGTAGCATCTG+AGG | - | chr4.1:44309670-44309689 | None:intergenic | 40.0% | |
| CAAAAAGCGAGAAACCAAAC+GGG | - | chr4.1:44310034-44310053 | None:intergenic | 40.0% | |
| CACCACACCCCTAAAATAAT+TGG | - | chr4.1:44309211-44309230 | None:intergenic | 40.0% | |
| CAGTAGTACAAGAATTCCAC+TGG | - | chr4.1:44308737-44308756 | None:intergenic | 40.0% | |
| CAGTGGAATTCTTGTACTAC+TGG | + | chr4.1:44308735-44308754 | MS.gene99345:CDS | 40.0% | |
| CCAACCCTCAAACATCTAAA+TGG | + | chr4.1:44309793-44309812 | MS.gene99345:CDS | 40.0% | |
| CCATCTTTCAACTACGCTTA+GGG | + | chr4.1:44309754-44309773 | MS.gene99345:CDS | 40.0% | |
| CCATTTAGATGTTTGAGGGT+TGG | - | chr4.1:44309796-44309815 | None:intergenic | 40.0% | |
| CGCTGCATCACACAAAATTT+AGG | + | chr4.1:44309586-44309605 | MS.gene99345:CDS | 40.0% | |
| GCAGTAGGACTTATCATTGA+TGG | - | chr4.1:44311956-44311975 | None:intergenic | 40.0% | |
| GCTTTGGCCATTAGCTAATA+AGG | + | chr4.1:44310564-44310583 | MS.gene99345:intron | 40.0% | |
| GGAATAGTTCATGCCTTAGA+AGG | + | chr4.1:44312978-44312997 | MS.gene99345:CDS | 40.0% | |
| GGAGTAAAGGTGATAAGTCT+AGG | + | chr4.1:44310130-44310149 | MS.gene99345:CDS | 40.0% | |
| GTGCTTAACAACATTCCCAA+AGG | + | chr4.1:44310423-44310442 | MS.gene99345:CDS | 40.0% | |
| TAGTTCATGCCTTAGAAGGA+TGG | + | chr4.1:44312982-44313001 | MS.gene99345:CDS | 40.0% | |
| TCCATCTTTCAACTACGCTT+AGG | + | chr4.1:44309753-44309772 | MS.gene99345:CDS | 40.0% | |
| TCTTAAGAGGTAGGTAACCA+TGG | - | chr4.1:44313070-44313089 | None:intergenic | 40.0% | |
| TGTTCTCCACCATTGTAAGT+TGG | - | chr4.1:44308678-44308697 | None:intergenic | 40.0% | |
| TTGGCTAGATGTTGTGTGTA+AGG | + | chr4.1:44309256-44309275 | MS.gene99345:intron | 40.0% | |
| TTTAGATGTTTGAGGGTTGG+AGG | - | chr4.1:44309793-44309812 | None:intergenic | 40.0% | |
| ! | ATGCTTGTGACTTGGATTAG+TGG | + | chr4.1:44309852-44309871 | MS.gene99345:CDS | 40.0% |
| ! | GGCTGATTTAAGTGGAGTAA+AGG | + | chr4.1:44310117-44310136 | MS.gene99345:CDS | 40.0% |
| ! | TTACAATGGTGGAGAACAGA+TGG | + | chr4.1:44308680-44308699 | MS.gene99345:CDS | 40.0% |
| !! | TCATTGATGGTGTATAGTGG+TGG | - | chr4.1:44311943-44311962 | None:intergenic | 40.0% |
| !! | TGCTTGTGACTTGGATTAGT+GGG | + | chr4.1:44309853-44309872 | MS.gene99345:CDS | 40.0% |
| !!! | TTTTTTGTTAGGGGCCTTTC+GGG | - | chr4.1:44312138-44312157 | None:intergenic | 40.0% |
| AACAAGCAACAACACCCGTT+TGG | + | chr4.1:44310017-44310036 | MS.gene99345:intron | 45.0% | |
| AAGATCTCAAGCTGCAGTGT+TGG | + | chr4.1:44309907-44309926 | MS.gene99345:CDS | 45.0% | |
| AGCTGAAAGAGCTTGAACGA+AGG | + | chr4.1:44310924-44310943 | MS.gene99345:CDS | 45.0% | |
| ATTGTCACTGAGCCTATCAC+TGG | + | chr4.1:44308821-44308840 | MS.gene99345:CDS | 45.0% | |
| CAACAAGAGTCATGAGTGCT+TGG | + | chr4.1:44312946-44312965 | MS.gene99345:CDS | 45.0% | |
| CAAGCACTCATGACTCTTGT+TGG | - | chr4.1:44312948-44312967 | None:intergenic | 45.0% | |
| CATAAACCTGCATTCGTGTG+AGG | + | chr4.1:44311979-44311998 | MS.gene99345:CDS | 45.0% | |
| CCCTAAGCGTAGTTGAAAGA+TGG | - | chr4.1:44309757-44309776 | None:intergenic | 45.0% | |
| GAGCAAATGCAAGCATCAGA+AGG | + | chr4.1:44311860-44311879 | MS.gene99345:CDS | 45.0% | |
| GCTGAAAGAGCTTGAACGAA+GGG | + | chr4.1:44310925-44310944 | MS.gene99345:CDS | 45.0% | |
| GGATGGAATGTTCATGAGTG+TGG | + | chr4.1:44312999-44313018 | MS.gene99345:CDS | 45.0% | |
| GTTATGCTAGAAGCCATCCA+TGG | - | chr4.1:44311598-44311617 | None:intergenic | 45.0% | |
| TACTCAAGACGAACAGAGAC+CGG | - | chr4.1:44309364-44309383 | None:intergenic | 45.0% | |
| TGAAATCAGAGGGAGGATTG+TGG | + | chr4.1:44311309-44311328 | MS.gene99345:intron | 45.0% | |
| TGATAGAGCCAAGCTTCCAT+TGG | - | chr4.1:44310960-44310979 | None:intergenic | 45.0% | |
| TGCAGGTTTATGACTGCAGT+AGG | - | chr4.1:44311971-44311990 | None:intergenic | 45.0% | |
| TGTGTTAAGTGCACCACATC+TGG | - | chr4.1:44309717-44309736 | None:intergenic | 45.0% | |
| TTGTGGTGCTTCCTCTTACA+AGG | + | chr4.1:44311326-44311345 | MS.gene99345:intron | 45.0% | |
| ! | ACCAATCAAGTGCTACTCAG+GGG | + | chr4.1:44310447-44310466 | MS.gene99345:CDS | 45.0% |
| ! | AGCACTTGATTGGTCCCTTT+GGG | - | chr4.1:44310441-44310460 | None:intergenic | 45.0% |
| ! | GACCAATCAAGTGCTACTCA+GGG | + | chr4.1:44310446-44310465 | MS.gene99345:CDS | 45.0% |
| ! | TAGCACTTGATTGGTCCCTT+TGG | - | chr4.1:44310442-44310461 | None:intergenic | 45.0% |
| !! | CTAAAGGTACCCTATGTAGG+CGG | - | chr4.1:44309323-44309342 | None:intergenic | 45.0% |
| AACCTGCATTCGTGTGAGGT+TGG | + | chr4.1:44311983-44312002 | MS.gene99345:intron | 50.0% | |
| AATGAGATGGTCGATCCGAG+AGG | + | chr4.1:44312112-44312131 | MS.gene99345:intron | 50.0% | |
| ACCACATCTGGTGATTCCTC+TGG | - | chr4.1:44309705-44309724 | None:intergenic | 50.0% | |
| ACCAGAGGAATCACCAGATG+TGG | + | chr4.1:44309701-44309720 | MS.gene99345:CDS | 50.0% | |
| AGCCAAGCTTCCATTGGACA+TGG | - | chr4.1:44310954-44310973 | None:intergenic | 50.0% | |
| AGCTTGTGTGAAGAGACCAG+AGG | + | chr4.1:44309686-44309705 | MS.gene99345:CDS | 50.0% | |
| CCTACGTGCAACATCCATGA+GGG | - | chr4.1:44309234-44309253 | None:intergenic | 50.0% | |
| CCTCATGGATGTTGCACGTA+GGG | + | chr4.1:44309232-44309251 | MS.gene99345:intron | 50.0% | |
| CGTGCTCTATGCTTGTGACT+TGG | + | chr4.1:44309844-44309863 | MS.gene99345:CDS | 50.0% | |
| CTTACAGCTCTCTTGCATGC+TGG | + | chr4.1:44308710-44308729 | MS.gene99345:CDS | 50.0% | |
| GCTTCCTCTTACAAGGTTGC+CGG | + | chr4.1:44311333-44311352 | MS.gene99345:intron | 50.0% | |
| TCGTTTGTGGCTGCACTGTA+TGG | + | chr4.1:44309035-44309054 | MS.gene99345:CDS | 50.0% | |
| TGGATGTTGCACGTAGGGTT+TGG | + | chr4.1:44309237-44309256 | MS.gene99345:intron | 50.0% | |
| TGGCTGCCAACTTACAATGG+TGG | + | chr4.1:44308669-44308688 | MS.gene99345:CDS | 50.0% | |
| TGGGAAGCAAGTATTCGCCA+TGG | + | chr4.1:44313050-44313069 | MS.gene99345:CDS | 50.0% | |
| TGTTTGAGGGTTGGAGGCTA+AGG | - | chr4.1:44309787-44309806 | None:intergenic | 50.0% | |
| TTCCAACCTCACACGAATGC+AGG | - | chr4.1:44311988-44312007 | None:intergenic | 50.0% | |
| ! | GGACCAATCAAGTGCTACTC+AGG | + | chr4.1:44310445-44310464 | MS.gene99345:CDS | 50.0% |
| ATGAGTGCTTGGCGCATTGC+TGG | + | chr4.1:44312957-44312976 | MS.gene99345:CDS | 55.0% | |
| ATGGCCGGCAACCTTGTAAG+AGG | - | chr4.1:44311340-44311359 | None:intergenic | 55.0% | |
| CCCTACGTGCAACATCCATG+AGG | - | chr4.1:44309235-44309254 | None:intergenic | 55.0% | |
| CCCTCATGGATGTTGCACGT+AGG | + | chr4.1:44309231-44309250 | MS.gene99345:intron | 55.0% | |
| CGCCATGTCCAATGGAAGCT+TGG | + | chr4.1:44310949-44310968 | MS.gene99345:CDS | 55.0% | |
| GCCCCTGAGTAGCACTTGAT+TGG | - | chr4.1:44310451-44310470 | None:intergenic | 55.0% | |
| TCGGGTGTTCCGCCTACATA+GGG | + | chr4.1:44309311-44309330 | MS.gene99345:intron | 55.0% | |
| TCTCTTGCATGCTGGACCAG+TGG | + | chr4.1:44308718-44308737 | MS.gene99345:CDS | 55.0% | |
| TTCGGGTGTTCCGCCTACAT+AGG | + | chr4.1:44309310-44309329 | MS.gene99345:intron | 55.0% | |
| CGAAGGGTCGCCATGTCCAA+TGG | + | chr4.1:44310941-44310960 | MS.gene99345:CDS | 60.0% | |
| ! | TTAGGGGTGTGGTGCCCTCA+TGG | + | chr4.1:44309217-44309236 | MS.gene99345:intron | 60.0% |
| GTCGATCCGAGAGGCCCGAA+AGG | + | chr4.1:44312121-44312140 | MS.gene99345:intron | 65.0% | |
| TAGGGGCCTTTCGGGCCTCT+CGG | - | chr4.1:44312130-44312149 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 44308668 | 44313100 | 44308668 | ID=MS.gene99345 |
| chr4.1 | mRNA | 44308668 | 44313100 | 44308668 | ID=MS.gene99345.t1;Parent=MS.gene99345 |
| chr4.1 | exon | 44308668 | 44308842 | 44308668 | ID=MS.gene99345.t1.exon1;Parent=MS.gene99345.t1 |
| chr4.1 | CDS | 44308668 | 44308842 | 44308668 | ID=cds.MS.gene99345.t1;Parent=MS.gene99345.t1 |
| chr4.1 | exon | 44308952 | 44309171 | 44308952 | ID=MS.gene99345.t1.exon2;Parent=MS.gene99345.t1 |
| chr4.1 | CDS | 44308952 | 44309171 | 44308952 | ID=cds.MS.gene99345.t1;Parent=MS.gene99345.t1 |
| chr4.1 | exon | 44309578 | 44309953 | 44309578 | ID=MS.gene99345.t1.exon3;Parent=MS.gene99345.t1 |
| chr4.1 | CDS | 44309578 | 44309953 | 44309578 | ID=cds.MS.gene99345.t1;Parent=MS.gene99345.t1 |
| chr4.1 | exon | 44310076 | 44310165 | 44310076 | ID=MS.gene99345.t1.exon4;Parent=MS.gene99345.t1 |
| chr4.1 | CDS | 44310076 | 44310165 | 44310076 | ID=cds.MS.gene99345.t1;Parent=MS.gene99345.t1 |
| chr4.1 | exon | 44310327 | 44310527 | 44310327 | ID=MS.gene99345.t1.exon5;Parent=MS.gene99345.t1 |
| chr4.1 | CDS | 44310327 | 44310527 | 44310327 | ID=cds.MS.gene99345.t1;Parent=MS.gene99345.t1 |
| chr4.1 | exon | 44310902 | 44310997 | 44310902 | ID=MS.gene99345.t1.exon6;Parent=MS.gene99345.t1 |
| chr4.1 | CDS | 44310902 | 44310997 | 44310902 | ID=cds.MS.gene99345.t1;Parent=MS.gene99345.t1 |
| chr4.1 | exon | 44311827 | 44312000 | 44311827 | ID=MS.gene99345.t1.exon7;Parent=MS.gene99345.t1 |
| chr4.1 | CDS | 44311827 | 44312000 | 44311827 | ID=cds.MS.gene99345.t1;Parent=MS.gene99345.t1 |
| chr4.1 | exon | 44312936 | 44313100 | 44312936 | ID=MS.gene99345.t1.exon8;Parent=MS.gene99345.t1 |
| chr4.1 | CDS | 44312936 | 44313100 | 44312936 | ID=cds.MS.gene99345.t1;Parent=MS.gene99345.t1 |
| Gene Sequence |
| Protein sequence |
