Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99550.t1 | XP_013445249.1 | 94.6 | 93 | 5 | 0 | 1 | 93 | 62 | 154 | 1.20E-44 | 188.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99550.t1 | P85524 | 43.3 | 90 | 49 | 2 | 1 | 89 | 62 | 150 | 4.0e-12 | 72.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99550.t1 | I3T217 | 94.6 | 93 | 5 | 0 | 1 | 93 | 62 | 154 | 8.8e-45 | 188.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049808 | MS.gene99550 | 0.806983 | 6.31E-50 | -1.69E-46 |
| MS.gene051328 | MS.gene99550 | 0.801228 | 9.94E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene99550 | 0.815803 | 7.67E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene99550 | 0.830069 | 3.61E-55 | -1.69E-46 |
| MS.gene052665 | MS.gene99550 | 0.815012 | 1.15E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene99550 | 0.810889 | 9.21E-51 | -1.69E-46 |
| MS.gene053581 | MS.gene99550 | 0.813006 | 3.18E-51 | -1.69E-46 |
| MS.gene054250 | MS.gene99550 | 0.804726 | 1.88E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene99550 | 0.810344 | 1.21E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene99550 | 0.810334 | 1.21E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene99550 | 0.807914 | 4.01E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene99550 | 0.81844 | 1.96E-52 | -1.69E-46 |
| MS.gene055891 | MS.gene99550 | 0.807085 | 6.00E-50 | -1.69E-46 |
| MS.gene057287 | MS.gene99550 | 0.814368 | 1.60E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene99550 | 0.817913 | 2.58E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99550.t1 | MTR_8g045735 | 94.624 | 93 | 5 | 0 | 1 | 93 | 62 | 154 | 3.74e-61 | 183 |
| MS.gene99550.t1 | MTR_8g045695 | 88.421 | 95 | 11 | 0 | 1 | 95 | 62 | 156 | 3.74e-59 | 178 |
| MS.gene99550.t1 | MTR_8g045665 | 86.316 | 95 | 13 | 0 | 1 | 95 | 62 | 156 | 1.33e-56 | 172 |
| MS.gene99550.t1 | MTR_8g045560 | 84.211 | 95 | 15 | 0 | 1 | 95 | 62 | 156 | 8.62e-55 | 167 |
| MS.gene99550.t1 | MTR_8g045640 | 84.211 | 95 | 15 | 0 | 1 | 95 | 62 | 156 | 1.68e-54 | 166 |
| MS.gene99550.t1 | MTR_8g045520 | 68.750 | 96 | 29 | 1 | 1 | 95 | 62 | 157 | 3.54e-44 | 140 |
| MS.gene99550.t1 | MTR_8g045570 | 70.330 | 91 | 26 | 1 | 1 | 90 | 62 | 152 | 5.94e-44 | 139 |
| MS.gene99550.t1 | MTR_8g045555 | 67.033 | 91 | 29 | 1 | 1 | 90 | 62 | 152 | 2.32e-42 | 135 |
| MS.gene99550.t1 | MTR_8g045490 | 65.625 | 96 | 31 | 2 | 1 | 95 | 62 | 156 | 3.60e-41 | 132 |
| MS.gene99550.t1 | MTR_8g045300 | 63.830 | 94 | 33 | 1 | 2 | 94 | 63 | 156 | 1.55e-40 | 131 |
| MS.gene99550.t1 | MTR_8g045400 | 63.542 | 96 | 33 | 2 | 1 | 95 | 62 | 156 | 1.70e-40 | 131 |
| MS.gene99550.t1 | MTR_1g030810 | 40.217 | 92 | 52 | 2 | 1 | 89 | 61 | 152 | 3.16e-19 | 77.0 |
| MS.gene99550.t1 | MTR_1g030820 | 38.043 | 92 | 54 | 2 | 1 | 89 | 61 | 152 | 1.44e-17 | 72.8 |
| MS.gene99550.t1 | MTR_8g012550 | 39.560 | 91 | 53 | 2 | 3 | 92 | 66 | 155 | 2.40e-17 | 72.4 |
| MS.gene99550.t1 | MTR_1g031640 | 41.758 | 91 | 46 | 4 | 1 | 90 | 63 | 147 | 4.21e-12 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99550.t1 | AT1G70870 | 45.556 | 90 | 47 | 2 | 1 | 89 | 50 | 138 | 4.61e-19 | 76.3 |
| MS.gene99550.t1 | AT5G28010 | 35.870 | 92 | 57 | 2 | 2 | 91 | 75 | 166 | 2.84e-14 | 64.7 |
| MS.gene99550.t1 | AT5G28010 | 35.870 | 92 | 57 | 2 | 2 | 91 | 75 | 166 | 2.84e-14 | 64.7 |
| MS.gene99550.t1 | AT1G70850 | 38.043 | 92 | 55 | 2 | 2 | 91 | 225 | 316 | 2.05e-13 | 64.3 |
| MS.gene99550.t1 | AT1G70850 | 38.043 | 92 | 55 | 2 | 2 | 91 | 225 | 316 | 2.05e-13 | 64.3 |
| MS.gene99550.t1 | AT5G28000 | 36.264 | 91 | 56 | 2 | 3 | 91 | 74 | 164 | 6.83e-13 | 60.8 |
| MS.gene99550.t1 | AT1G70840 | 34.783 | 92 | 58 | 2 | 2 | 91 | 80 | 171 | 1.18e-12 | 60.5 |
| MS.gene99550.t1 | AT1G23120 | 33.708 | 89 | 57 | 2 | 1 | 88 | 58 | 145 | 1.23e-12 | 60.1 |
| MS.gene99550.t1 | AT1G23120 | 33.708 | 89 | 57 | 2 | 1 | 88 | 108 | 195 | 2.48e-12 | 60.1 |
| MS.gene99550.t1 | AT1G24020 | 36.047 | 86 | 53 | 2 | 5 | 89 | 67 | 151 | 3.23e-12 | 58.9 |
| MS.gene99550.t1 | AT1G24020 | 36.047 | 86 | 53 | 2 | 5 | 89 | 67 | 151 | 3.23e-12 | 58.9 |
| MS.gene99550.t1 | AT1G70890 | 35.870 | 92 | 57 | 2 | 2 | 91 | 67 | 158 | 4.21e-12 | 58.9 |
Find 22 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATAACTTTCAAGTTGTT+TGG | 0.327904 | 8.1:+59637187 | MS.gene99550:CDS |
| AAGATGACCATCAATATCTT+TGG | 0.335693 | 8.1:-59637365 | None:intergenic |
| ATGGAAGTTCTGCTGTTAGA+TGG | 0.411879 | 8.1:+59637269 | MS.gene99550:CDS |
| TGGAGATATTGAAAACTATA+AGG | 0.439418 | 8.1:+59637210 | MS.gene99550:CDS |
| GAAGTGCTTAACAAGGCTAA+TGG | 0.442453 | 8.1:+59637250 | MS.gene99550:CDS |
| AGGTAGTCCATCCAGCCATT+TGG | 0.456227 | 8.1:-59637331 | None:intergenic |
| AAAGGAACCAAAGATATTGA+TGG | 0.467555 | 8.1:+59637358 | MS.gene99550:CDS |
| ATAACTTTCAAGTTGTTTGG+TGG | 0.479625 | 8.1:+59637190 | MS.gene99550:CDS |
| TATCTTTGGTTCCTTTGCTA+AGG | 0.518303 | 8.1:-59637351 | None:intergenic |
| TAACATAACAACAGATGGTA+AGG | 0.521132 | 8.1:+59637117 | MS.gene99550:intron |
| ATGTTGATACTCCAAATGGC+TGG | 0.578150 | 8.1:+59637320 | MS.gene99550:CDS |
| ATTGATGGTCATCTTGTCAA+GGG | 0.586933 | 8.1:+59637373 | MS.gene99550:CDS |
| TGATACTCCAAATGGCTGGA+TGG | 0.587093 | 8.1:+59637324 | MS.gene99550:CDS |
| TATTGATGGTCATCTTGTCA+AGG | 0.589389 | 8.1:+59637372 | MS.gene99550:CDS |
| GAGGATGTTGATACTCCAAA+TGG | 0.593330 | 8.1:+59637316 | MS.gene99550:CDS |
| AGGTACACACATGCAATGAG+AGG | 0.626711 | 8.1:+59637137 | MS.gene99550:CDS |
| CATCTTAGAAGTGCTTAACA+AGG | 0.631478 | 8.1:+59637243 | MS.gene99550:CDS |
| TTGATGGTCATCTTGTCAAG+GGG | 0.646397 | 8.1:+59637374 | MS.gene99550:CDS |
| TGGATGGACTACCTTAGCAA+AGG | 0.650698 | 8.1:+59637340 | MS.gene99550:CDS |
| GGTACACACATGCAATGAGA+GGG | 0.691358 | 8.1:+59637138 | MS.gene99550:CDS |
| TGATTATGAGAAGAACAATG+AGG | 0.694185 | 8.1:+59637297 | MS.gene99550:CDS |
| TGATGGTCATCTTGTCAAGG+GGG | 0.696400 | 8.1:+59637375 | MS.gene99550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CGTAAAATTAAATAAAAAAA+GGG | + | chr8.1:59635987-59636006 | MS.gene99550:intron | 10.0% |
| !!! | AAAATGTTTTTTATTGTTTT+TGG | + | chr8.1:59637081-59637100 | MS.gene99550:intron | 10.0% |
| !! | GCGTAAAATTAAATAAAAAA+AGG | + | chr8.1:59635986-59636005 | MS.gene99550:intron | 15.0% |
| !! | TTAGAACTAAAATAAAATTG+CGG | + | chr8.1:59636350-59636369 | MS.gene99550:intron | 15.0% |
| !!! | AAGAAAAATTATACTTTTCA+AGG | + | chr8.1:59635740-59635759 | MS.gene99550:intron | 15.0% |
| !!! | TAAATTTTCACTTTTTGTTT+TGG | - | chr8.1:59636609-59636628 | None:intergenic | 15.0% |
| !!! | TAAGATAAAGTTTTTACTTT+TGG | + | chr8.1:59636996-59637015 | MS.gene99550:intron | 15.0% |
| !!! | TATTAAAGTCAAACTTTTAT+CGG | + | chr8.1:59636734-59636753 | MS.gene99550:intron | 15.0% |
| !! | ATCAAAAATCAAATATCACA+AGG | - | chr8.1:59636705-59636724 | None:intergenic | 20.0% |
| !! | ATCATAAAAACCTAATGATA+AGG | - | chr8.1:59636832-59636851 | None:intergenic | 20.0% |
| !! | ATTTATCTTTCTAGATCTAA+TGG | + | chr8.1:59636123-59636142 | MS.gene99550:intron | 20.0% |
| !! | TATTACATACAACTCATATA+GGG | - | chr8.1:59636067-59636086 | None:intergenic | 20.0% |
| !!! | ATTATTGTATTTTCTCTCTT+TGG | - | chr8.1:59636498-59636517 | None:intergenic | 20.0% |
| !!! | TGGTGAAACTAATATTTTTA+AGG | + | chr8.1:59636857-59636876 | MS.gene99550:intron | 20.0% |
| !!! | TTAGGTTTTTATGATTTCTT+TGG | + | chr8.1:59636837-59636856 | MS.gene99550:intron | 20.0% |
| !!! | TTATTGTATTTTCTCTCTTT+GGG | - | chr8.1:59636497-59636516 | None:intergenic | 20.0% |
| ! | AATGCTAACAAATGTTCTTA+AGG | - | chr8.1:59637036-59637055 | None:intergenic | 25.0% |
| ! | ATAGAGGGAAATTATTGTTA+AGG | + | chr8.1:59636377-59636396 | MS.gene99550:intron | 25.0% |
| ! | ATTACATACAACTCATATAG+GGG | - | chr8.1:59636066-59636085 | None:intergenic | 25.0% |
| ! | ATTGCCTTTATAAGTTCTTT+AGG | - | chr8.1:59635778-59635797 | None:intergenic | 25.0% |
| ! | CAAATCAAATTGTGTTCAAA+TGG | - | chr8.1:59636550-59636569 | None:intergenic | 25.0% |
| ! | CTATTACATACAACTCATAT+AGG | - | chr8.1:59636068-59636087 | None:intergenic | 25.0% |
| ! | GTGCTAAATTATTTATGCTT+AGG | + | chr8.1:59636031-59636050 | MS.gene99550:intron | 25.0% |
| ! | TGGAGATATTGAAAACTATA+AGG | + | chr8.1:59637210-59637229 | MS.gene99550:CDS | 25.0% |
| ! | TTCTTAGACAAATTGTAGTA+CGG | - | chr8.1:59635725-59635744 | None:intergenic | 25.0% |
| !!! | AAGATAACTTTCAAGTTGTT+TGG | + | chr8.1:59637187-59637206 | MS.gene99550:CDS | 25.0% |
| !!! | AATTTTTCGATCTAGTGTAA+TGG | + | chr8.1:59636231-59636250 | MS.gene99550:intron | 25.0% |
| !!! | ATTTTACTAATGAAGAGTAC+AGG | + | chr8.1:59636458-59636477 | MS.gene99550:intron | 25.0% |
| !!! | ATTTTCACTTTTTGTTTTGG+TGG | - | chr8.1:59636606-59636625 | None:intergenic | 25.0% |
| !!! | CTGTTTAGGTTATTTTGATT+AGG | - | chr8.1:59636580-59636599 | None:intergenic | 25.0% |
| !!! | GTAATGGATAAGTAATTACA+TGG | + | chr8.1:59636247-59636266 | MS.gene99550:intron | 25.0% |
| !!! | TATTTGATTTTTGATCCTTG+TGG | + | chr8.1:59636710-59636729 | MS.gene99550:intron | 25.0% |
| AAAGGAACCAAAGATATTGA+TGG | + | chr8.1:59637358-59637377 | MS.gene99550:CDS | 30.0% | |
| AAGATGACCATCAATATCTT+TGG | - | chr8.1:59637368-59637387 | None:intergenic | 30.0% | |
| AATCAAACAAGATGATGACT+TGG | - | chr8.1:59635636-59635655 | None:intergenic | 30.0% | |
| ACAATATCTCTTGGAAGTTA+CGG | - | chr8.1:59636657-59636676 | None:intergenic | 30.0% | |
| ACCATCTGTTGTTATGTTAA+AGG | - | chr8.1:59637116-59637135 | None:intergenic | 30.0% | |
| ATAAAATTGCGGAATGATAG+AGG | + | chr8.1:59636361-59636380 | MS.gene99550:intron | 30.0% | |
| CTTAGGGTTAATAAAACGTA+TGG | + | chr8.1:59636415-59636434 | MS.gene99550:intron | 30.0% | |
| GCTACAAAGTTAATCTCTTA+GGG | + | chr8.1:59636399-59636418 | MS.gene99550:intron | 30.0% | |
| TAAAATTGCGGAATGATAGA+GGG | + | chr8.1:59636362-59636381 | MS.gene99550:intron | 30.0% | |
| TAACATAACAACAGATGGTA+AGG | + | chr8.1:59637117-59637136 | MS.gene99550:intron | 30.0% | |
| TAATTACATGGCACATATCT+AGG | + | chr8.1:59636259-59636278 | MS.gene99550:intron | 30.0% | |
| TGATTATGAGAAGAACAATG+AGG | + | chr8.1:59637297-59637316 | MS.gene99550:CDS | 30.0% | |
| TGGACCTAAAGAACTTATAA+AGG | + | chr8.1:59635771-59635790 | MS.gene99550:intron | 30.0% | |
| ! | AGTATGTCTGAAGTGAATAT+AGG | - | chr8.1:59635854-59635873 | None:intergenic | 30.0% |
| ! | GTTTGACTTTAATAACCACA+AGG | - | chr8.1:59636728-59636747 | None:intergenic | 30.0% |
| ! | TGATTTTAAACTATCCTGTG+AGG | + | chr8.1:59636311-59636330 | MS.gene99550:intron | 30.0% |
| !! | ATAACTTTCAAGTTGTTTGG+TGG | + | chr8.1:59637190-59637209 | MS.gene99550:CDS | 30.0% |
| !! | GTTGTATGTAATAGTTCTAG+TGG | + | chr8.1:59636074-59636093 | MS.gene99550:intron | 30.0% |
| !! | TACTTTTCAAGGCAATAATC+TGG | + | chr8.1:59635751-59635770 | MS.gene99550:intron | 30.0% |
| AATCCTTAACTAGTGCTCTA+AGG | - | chr8.1:59636899-59636918 | None:intergenic | 35.0% | |
| ATCCTTAACTAGTGCTCTAA+GGG | - | chr8.1:59636898-59636917 | None:intergenic | 35.0% | |
| CCAAGAGATATTGTGCTTTA+TGG | + | chr8.1:59636663-59636682 | MS.gene99550:intron | 35.0% | |
| CCATAAAGCACAATATCTCT+TGG | - | chr8.1:59636666-59636685 | None:intergenic | 35.0% | |
| GATTAACTTTGTAACCTCAC+AGG | - | chr8.1:59636328-59636347 | None:intergenic | 35.0% | |
| GCCTTTAACATAACAACAGA+TGG | + | chr8.1:59637112-59637131 | MS.gene99550:intron | 35.0% | |
| GGCTACAAAGTTAATCTCTT+AGG | + | chr8.1:59636398-59636417 | MS.gene99550:intron | 35.0% | |
| TGGCACATATCTAGGTAAAA+CGG | + | chr8.1:59636267-59636286 | MS.gene99550:intron | 35.0% | |
| TGTGTTCAAATGGAACTTTG+TGG | - | chr8.1:59636540-59636559 | None:intergenic | 35.0% | |
| ! | AATTCAAGTTCGAGTTCAAC+TGG | + | chr8.1:59636182-59636201 | MS.gene99550:intron | 35.0% |
| ! | ATTGATGGTCATCTTGTCAA+GGG | + | chr8.1:59637373-59637392 | MS.gene99550:CDS | 35.0% |
| ! | GCATCGATATCCTTATCATT+AGG | + | chr8.1:59636819-59636838 | MS.gene99550:intron | 35.0% |
| ! | GTTTGCTACGATAGCAAAAA+GGG | - | chr8.1:59636635-59636654 | None:intergenic | 35.0% |
| ! | TATCTTTGGTTCCTTTGCTA+AGG | - | chr8.1:59637354-59637373 | None:intergenic | 35.0% |
| ! | TATTGATGGTCATCTTGTCA+AGG | + | chr8.1:59637372-59637391 | MS.gene99550:CDS | 35.0% |
| !! | CATCTTAGAAGTGCTTAACA+AGG | + | chr8.1:59637243-59637262 | MS.gene99550:CDS | 35.0% |
| ATGGAACTTTGTGGTCGTAA+TGG | - | chr8.1:59636531-59636550 | None:intergenic | 40.0% | |
| ATGGAAGTTCTGCTGTTAGA+TGG | + | chr8.1:59637269-59637288 | MS.gene99550:CDS | 40.0% | |
| ATGTTGATACTCCAAATGGC+TGG | + | chr8.1:59637320-59637339 | MS.gene99550:CDS | 40.0% | |
| CTATACCAAGCAACTCATGT+GGG | + | chr8.1:59636158-59636177 | MS.gene99550:intron | 40.0% | |
| GAGGATGTTGATACTCCAAA+TGG | + | chr8.1:59637316-59637335 | MS.gene99550:CDS | 40.0% | |
| TATACCAAGCAACTCATGTG+GGG | + | chr8.1:59636159-59636178 | MS.gene99550:intron | 40.0% | |
| ! | GAAGTGCTTAACAAGGCTAA+TGG | + | chr8.1:59637250-59637269 | MS.gene99550:CDS | 40.0% |
| ! | TTCCCTTAGAGCACTAGTTA+AGG | + | chr8.1:59636893-59636912 | MS.gene99550:intron | 40.0% |
| ! | TTGATGGTCATCTTGTCAAG+GGG | + | chr8.1:59637374-59637393 | MS.gene99550:CDS | 40.0% |
| !! | GGTTTGCTACGATAGCAAAA+AGG | - | chr8.1:59636636-59636655 | None:intergenic | 40.0% |
| !!! | TGTTTTGGTGGCAACTGTTT+AGG | - | chr8.1:59636594-59636613 | None:intergenic | 40.0% |
| AATTCCCCACATGAGTTGCT+TGG | - | chr8.1:59636166-59636185 | None:intergenic | 45.0% | |
| AGGTACACACATGCAATGAG+AGG | + | chr8.1:59637137-59637156 | MS.gene99550:CDS | 45.0% | |
| AGTTCAACTGGATGGTTGAG+GGG | + | chr8.1:59636194-59636213 | MS.gene99550:intron | 45.0% | |
| CATGAGTTGCTTGGTATAGC+AGG | - | chr8.1:59636157-59636176 | None:intergenic | 45.0% | |
| GAGTTCAACTGGATGGTTGA+GGG | + | chr8.1:59636193-59636212 | MS.gene99550:intron | 45.0% | |
| GCTATACCAAGCAACTCATG+TGG | + | chr8.1:59636157-59636176 | MS.gene99550:intron | 45.0% | |
| GGTACACACATGCAATGAGA+GGG | + | chr8.1:59637138-59637157 | MS.gene99550:CDS | 45.0% | |
| TCATCTTGTCAAGGGGGAAA+AGG | + | chr8.1:59637381-59637400 | MS.gene99550:CDS | 45.0% | |
| TGATACTCCAAATGGCTGGA+TGG | + | chr8.1:59637324-59637343 | MS.gene99550:CDS | 45.0% | |
| TGATGGTCATCTTGTCAAGG+GGG | + | chr8.1:59637375-59637394 | MS.gene99550:CDS | 45.0% | |
| TTGCTTGGTATAGCAGGTGT+GGG | - | chr8.1:59636151-59636170 | None:intergenic | 45.0% | |
| ! | CAAGTTCGAGTTCAACTGGA+TGG | + | chr8.1:59636186-59636205 | MS.gene99550:intron | 45.0% |
| !! | TGGATGGACTACCTTAGCAA+AGG | + | chr8.1:59637340-59637359 | MS.gene99550:CDS | 45.0% |
| !! | TTAAAGTAATATTAAAAATA+AGG | - | chr8.1:59637060-59637079 | None:intergenic | 5.0% |
| !!! | TTTTATTTATTAATGTATTA+TGG | - | chr8.1:59635923-59635942 | None:intergenic | 5.0% |
| AGGTAGTCCATCCAGCCATT+TGG | - | chr8.1:59637334-59637353 | None:intergenic | 50.0% | |
| CGAGTTCAACTGGATGGTTG+AGG | + | chr8.1:59636192-59636211 | MS.gene99550:intron | 50.0% | |
| GTTGCTTGGTATAGCAGGTG+TGG | - | chr8.1:59636152-59636171 | None:intergenic | 50.0% | |
| ! | GTTGAGGGGTAGTCTTGACT+TGG | + | chr8.1:59636208-59636227 | MS.gene99550:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 59635597 | 59637414 | 59635597 | ID=MS.gene99550 |
| chr8.1 | mRNA | 59635597 | 59637414 | 59635597 | ID=MS.gene99550.t1;Parent=MS.gene99550 |
| chr8.1 | exon | 59635597 | 59635600 | 59635597 | ID=MS.gene99550.t1.exon1;Parent=MS.gene99550.t1 |
| chr8.1 | CDS | 59635597 | 59635600 | 59635597 | ID=cds.MS.gene99550.t1;Parent=MS.gene99550.t1 |
| chr8.1 | exon | 59637131 | 59637414 | 59637131 | ID=MS.gene99550.t1.exon2;Parent=MS.gene99550.t1 |
| chr8.1 | CDS | 59637131 | 59637414 | 59637131 | ID=cds.MS.gene99550.t1;Parent=MS.gene99550.t1 |
| Gene Sequence |
| Protein sequence |
