Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99890.t1 | XP_003601058.1 | 79.1 | 354 | 21 | 2 | 1 | 301 | 10 | 363 | 3.10E-142 | 514.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99890.t1 | Q9SUF1 | 48.0 | 354 | 120 | 6 | 1 | 298 | 8 | 353 | 3.5e-78 | 293.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99890.t1 | G7J316 | 79.1 | 354 | 21 | 2 | 1 | 301 | 10 | 363 | 2.2e-142 | 514.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055154 | MS.gene99890 | 0.800275 | 1.56E-48 | -1.69E-46 |
| MS.gene060694 | MS.gene99890 | 0.804971 | 1.67E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99890 | MS.gene09837 | PPI |
| MS.gene018547 | MS.gene99890 | PPI |
| MS.gene061906 | MS.gene99890 | PPI |
| MS.gene64506 | MS.gene99890 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99890.t1 | MTR_3g072530 | 79.096 | 354 | 21 | 2 | 1 | 301 | 10 | 363 | 0.0 | 547 |
| MS.gene99890.t1 | MTR_3g072530 | 83.624 | 287 | 13 | 1 | 1 | 253 | 10 | 296 | 4.33e-171 | 476 |
| MS.gene99890.t1 | MTR_3g072560 | 62.948 | 251 | 89 | 3 | 3 | 253 | 16 | 262 | 3.02e-111 | 328 |
| MS.gene99890.t1 | MTR_1g030600 | 52.896 | 259 | 119 | 2 | 7 | 263 | 20 | 277 | 5.26e-93 | 281 |
| MS.gene99890.t1 | MTR_3g072520 | 50.923 | 271 | 118 | 3 | 1 | 263 | 5 | 268 | 8.88e-89 | 270 |
| MS.gene99890.t1 | MTR_0096s0100 | 49.805 | 257 | 127 | 2 | 7 | 263 | 20 | 274 | 2.28e-84 | 258 |
| MS.gene99890.t1 | MTR_3g072500 | 47.059 | 255 | 131 | 2 | 1 | 253 | 16 | 268 | 1.63e-83 | 253 |
| MS.gene99890.t1 | MTR_3g072500 | 47.843 | 255 | 129 | 2 | 1 | 253 | 16 | 268 | 1.82e-82 | 254 |
| MS.gene99890.t1 | MTR_1g030580 | 47.826 | 253 | 130 | 1 | 1 | 253 | 12 | 262 | 6.17e-81 | 250 |
| MS.gene99890.t1 | MTR_1g068630 | 44.318 | 264 | 142 | 3 | 1 | 263 | 11 | 270 | 1.60e-77 | 240 |
| MS.gene99890.t1 | MTR_7g100050 | 44.622 | 251 | 130 | 3 | 7 | 253 | 15 | 260 | 1.06e-75 | 236 |
| MS.gene99890.t1 | MTR_8g041390 | 40.304 | 263 | 150 | 3 | 6 | 263 | 14 | 274 | 2.36e-69 | 220 |
| MS.gene99890.t1 | MTR_3g012420 | 41.699 | 259 | 147 | 3 | 7 | 263 | 19 | 275 | 1.35e-65 | 211 |
| MS.gene99890.t1 | MTR_3g072500 | 47.000 | 200 | 104 | 1 | 1 | 198 | 16 | 215 | 1.55e-62 | 197 |
| MS.gene99890.t1 | MTR_3g112480 | 41.154 | 260 | 126 | 4 | 11 | 253 | 26 | 275 | 9.91e-57 | 188 |
| MS.gene99890.t1 | MTR_1g023180 | 37.241 | 290 | 146 | 5 | 7 | 268 | 23 | 304 | 7.16e-56 | 186 |
| MS.gene99890.t1 | MTR_1g074160 | 36.992 | 246 | 152 | 2 | 7 | 252 | 15 | 257 | 1.32e-54 | 179 |
| MS.gene99890.t1 | MTR_1g074160 | 36.992 | 246 | 152 | 2 | 7 | 252 | 15 | 257 | 2.28e-53 | 178 |
| MS.gene99890.t1 | MTR_1g051120 | 34.749 | 259 | 168 | 1 | 14 | 272 | 25 | 282 | 2.43e-53 | 178 |
| MS.gene99890.t1 | MTR_1g074120 | 36.992 | 246 | 152 | 2 | 7 | 252 | 18 | 260 | 1.93e-52 | 176 |
| MS.gene99890.t1 | MTR_1g074070 | 35.316 | 269 | 166 | 4 | 6 | 272 | 18 | 280 | 2.50e-52 | 175 |
| MS.gene99890.t1 | MTR_1g074020 | 35.075 | 268 | 167 | 3 | 7 | 272 | 15 | 277 | 3.91e-52 | 175 |
| MS.gene99890.t1 | MTR_1g073990 | 35.185 | 270 | 166 | 4 | 6 | 272 | 18 | 281 | 1.81e-51 | 173 |
| MS.gene99890.t1 | MTR_1g070175 | 30.141 | 355 | 173 | 7 | 7 | 300 | 18 | 358 | 1.94e-48 | 165 |
| MS.gene99890.t1 | MTR_3g072500 | 47.305 | 167 | 84 | 2 | 89 | 253 | 1 | 165 | 4.74e-48 | 162 |
| MS.gene99890.t1 | MTR_5g021160 | 35.424 | 271 | 156 | 5 | 6 | 263 | 9 | 273 | 1.45e-46 | 158 |
| MS.gene99890.t1 | MTR_6g081840 | 29.855 | 345 | 183 | 5 | 14 | 301 | 19 | 361 | 2.90e-46 | 160 |
| MS.gene99890.t1 | MTR_5g021160 | 35.968 | 253 | 151 | 4 | 6 | 253 | 9 | 255 | 1.44e-45 | 158 |
| MS.gene99890.t1 | MTR_3g095460 | 31.560 | 282 | 181 | 4 | 7 | 280 | 7 | 284 | 2.57e-45 | 157 |
| MS.gene99890.t1 | MTR_3g095420 | 33.080 | 263 | 160 | 5 | 1 | 253 | 3 | 259 | 3.69e-44 | 154 |
| MS.gene99890.t1 | MTR_3g095450 | 33.086 | 269 | 172 | 4 | 1 | 263 | 1 | 267 | 3.95e-43 | 151 |
| MS.gene99890.t1 | MTR_6g036450 | 30.078 | 256 | 173 | 3 | 1 | 253 | 12 | 264 | 3.58e-42 | 149 |
| MS.gene99890.t1 | MTR_2g016710 | 30.702 | 342 | 178 | 4 | 7 | 294 | 10 | 346 | 5.64e-42 | 148 |
| MS.gene99890.t1 | MTR_1g038560 | 33.333 | 273 | 151 | 4 | 11 | 257 | 9 | 276 | 1.21e-41 | 147 |
| MS.gene99890.t1 | MTR_3g095440 | 32.759 | 290 | 182 | 7 | 1 | 280 | 1 | 287 | 1.47e-41 | 147 |
| MS.gene99890.t1 | MTR_2g016710 | 36.546 | 249 | 148 | 3 | 7 | 252 | 10 | 251 | 1.63e-41 | 146 |
| MS.gene99890.t1 | MTR_3g095440 | 33.846 | 260 | 162 | 6 | 1 | 253 | 1 | 257 | 3.09e-41 | 144 |
| MS.gene99890.t1 | MTR_8g092650 | 32.601 | 273 | 176 | 3 | 1 | 267 | 1 | 271 | 3.93e-40 | 143 |
| MS.gene99890.t1 | MTR_4g094340 | 36.585 | 246 | 144 | 4 | 8 | 247 | 12 | 251 | 1.60e-39 | 139 |
| MS.gene99890.t1 | MTR_4g094340 | 36.585 | 246 | 144 | 4 | 8 | 247 | 30 | 269 | 1.97e-39 | 140 |
| MS.gene99890.t1 | MTR_4g094340 | 33.688 | 282 | 172 | 5 | 8 | 280 | 12 | 287 | 2.78e-39 | 141 |
| MS.gene99890.t1 | MTR_4g094340 | 33.688 | 282 | 172 | 5 | 8 | 280 | 30 | 305 | 3.46e-39 | 141 |
| MS.gene99890.t1 | MTR_3g112480 | 38.498 | 213 | 104 | 4 | 58 | 253 | 18 | 220 | 1.60e-38 | 139 |
| MS.gene99890.t1 | MTR_1g114210 | 31.227 | 269 | 146 | 5 | 28 | 266 | 34 | 293 | 3.04e-38 | 138 |
| MS.gene99890.t1 | MTR_7g111830 | 27.217 | 327 | 180 | 4 | 8 | 276 | 10 | 336 | 5.47e-38 | 138 |
| MS.gene99890.t1 | MTR_3g090550 | 35.391 | 243 | 150 | 4 | 22 | 262 | 23 | 260 | 2.89e-37 | 135 |
| MS.gene99890.t1 | MTR_1g051120 | 34.225 | 187 | 123 | 0 | 14 | 200 | 25 | 211 | 4.51e-37 | 133 |
| MS.gene99890.t1 | MTR_1g051120 | 34.595 | 185 | 121 | 0 | 14 | 198 | 25 | 209 | 7.69e-37 | 131 |
| MS.gene99890.t1 | MTR_5g025340 | 32.743 | 226 | 137 | 2 | 18 | 228 | 23 | 248 | 1.81e-35 | 132 |
| MS.gene99890.t1 | MTR_5g034970 | 30.744 | 309 | 158 | 8 | 11 | 272 | 13 | 312 | 3.68e-34 | 127 |
| MS.gene99890.t1 | MTR_4g129650 | 29.217 | 332 | 168 | 10 | 11 | 283 | 14 | 337 | 6.82e-34 | 127 |
| MS.gene99890.t1 | MTR_2g007990 | 26.781 | 351 | 189 | 8 | 8 | 293 | 18 | 365 | 7.56e-34 | 127 |
| MS.gene99890.t1 | MTR_4g106720 | 31.111 | 225 | 151 | 3 | 31 | 254 | 38 | 259 | 3.40e-33 | 125 |
| MS.gene99890.t1 | MTR_5g034910 | 33.205 | 259 | 165 | 6 | 11 | 267 | 13 | 265 | 3.89e-33 | 124 |
| MS.gene99890.t1 | MTR_5g025370 | 32.365 | 241 | 146 | 4 | 11 | 234 | 16 | 256 | 5.48e-33 | 125 |
| MS.gene99890.t1 | MTR_5g025290 | 33.047 | 233 | 139 | 3 | 18 | 234 | 24 | 255 | 5.63e-33 | 125 |
| MS.gene99890.t1 | MTR_5g025290 | 33.047 | 233 | 139 | 3 | 18 | 234 | 52 | 283 | 1.02e-32 | 125 |
| MS.gene99890.t1 | MTR_5g025400 | 31.381 | 239 | 147 | 3 | 13 | 234 | 19 | 257 | 3.34e-32 | 123 |
| MS.gene99890.t1 | MTR_5g034980 | 33.333 | 258 | 162 | 6 | 1 | 253 | 1 | 253 | 6.49e-32 | 120 |
| MS.gene99890.t1 | MTR_5g034980 | 33.077 | 260 | 164 | 6 | 1 | 255 | 1 | 255 | 1.14e-31 | 121 |
| MS.gene99890.t1 | MTR_2g007970 | 28.280 | 343 | 187 | 6 | 13 | 301 | 20 | 357 | 4.95e-31 | 120 |
| MS.gene99890.t1 | MTR_2g065550 | 29.393 | 313 | 167 | 5 | 13 | 272 | 18 | 329 | 5.51e-31 | 119 |
| MS.gene99890.t1 | MTR_2g027030 | 28.530 | 347 | 187 | 6 | 8 | 300 | 15 | 354 | 6.27e-31 | 119 |
| MS.gene99890.t1 | MTR_8g006010 | 31.687 | 243 | 158 | 3 | 13 | 252 | 18 | 255 | 7.37e-31 | 119 |
| MS.gene99890.t1 | MTR_1g030400 | 25.714 | 350 | 184 | 9 | 14 | 293 | 16 | 359 | 7.78e-31 | 119 |
| MS.gene99890.t1 | MTR_5g025330 | 29.870 | 231 | 147 | 2 | 13 | 228 | 17 | 247 | 1.59e-30 | 120 |
| MS.gene99890.t1 | MTR_2g007960 | 30.385 | 260 | 159 | 6 | 8 | 253 | 15 | 266 | 1.97e-30 | 118 |
| MS.gene99890.t1 | MTR_8g006050 | 30.714 | 280 | 149 | 6 | 36 | 272 | 25 | 302 | 5.68e-30 | 116 |
| MS.gene99890.t1 | MTR_8g006120 | 28.909 | 339 | 179 | 6 | 11 | 292 | 16 | 349 | 1.09e-29 | 116 |
| MS.gene99890.t1 | MTR_5g034990 | 34.361 | 227 | 137 | 4 | 31 | 254 | 40 | 257 | 2.13e-29 | 115 |
| MS.gene99890.t1 | MTR_8g072350 | 32.883 | 222 | 131 | 4 | 17 | 221 | 20 | 240 | 2.50e-29 | 115 |
| MS.gene99890.t1 | MTR_3g019050 | 29.583 | 240 | 158 | 3 | 19 | 253 | 32 | 265 | 4.65e-29 | 114 |
| MS.gene99890.t1 | MTR_2g102340 | 27.068 | 266 | 174 | 3 | 9 | 265 | 42 | 296 | 6.10e-29 | 113 |
| MS.gene99890.t1 | MTR_5g089390 | 30.290 | 241 | 161 | 3 | 13 | 253 | 22 | 255 | 7.78e-29 | 113 |
| MS.gene99890.t1 | MTR_5g034930 | 27.507 | 349 | 192 | 9 | 1 | 292 | 2 | 346 | 9.35e-29 | 113 |
| MS.gene99890.t1 | MTR_4g094342 | 30.279 | 251 | 168 | 3 | 8 | 253 | 16 | 264 | 1.52e-28 | 112 |
| MS.gene99890.t1 | MTR_2g102340 | 27.559 | 254 | 164 | 3 | 9 | 253 | 16 | 258 | 1.58e-28 | 113 |
| MS.gene99890.t1 | MTR_4g094340 | 36.000 | 200 | 118 | 3 | 8 | 201 | 30 | 225 | 2.39e-28 | 109 |
| MS.gene99890.t1 | MTR_5g068790 | 29.730 | 259 | 168 | 5 | 3 | 253 | 15 | 267 | 4.67e-28 | 112 |
| MS.gene99890.t1 | MTR_5g021160 | 33.898 | 177 | 107 | 3 | 82 | 253 | 1 | 172 | 6.81e-28 | 109 |
| MS.gene99890.t1 | MTR_4g094340 | 30.973 | 226 | 142 | 4 | 64 | 280 | 1 | 221 | 9.03e-28 | 109 |
| MS.gene99890.t1 | MTR_1g014510 | 27.019 | 322 | 177 | 6 | 11 | 276 | 17 | 336 | 4.68e-27 | 110 |
| MS.gene99890.t1 | MTR_2g007260 | 25.970 | 335 | 186 | 7 | 8 | 282 | 17 | 349 | 7.14e-27 | 108 |
| MS.gene99890.t1 | MTR_1g052205 | 38.732 | 142 | 74 | 3 | 118 | 257 | 13 | 143 | 2.56e-26 | 104 |
| MS.gene99890.t1 | MTR_4g094352 | 30.830 | 253 | 155 | 7 | 8 | 247 | 15 | 260 | 3.11e-26 | 107 |
| MS.gene99890.t1 | MTR_5g069040 | 29.730 | 259 | 170 | 4 | 3 | 253 | 15 | 269 | 9.71e-26 | 105 |
| MS.gene99890.t1 | MTR_6g007747 | 30.973 | 226 | 148 | 5 | 22 | 247 | 30 | 247 | 1.53e-25 | 104 |
| MS.gene99890.t1 | MTR_6g007760 | 28.692 | 237 | 163 | 5 | 19 | 253 | 25 | 257 | 1.36e-24 | 101 |
| MS.gene99890.t1 | MTR_8g092650 | 33.333 | 156 | 96 | 3 | 104 | 253 | 26 | 179 | 1.42e-24 | 100 |
| MS.gene99890.t1 | MTR_0103s0090 | 32.287 | 223 | 136 | 5 | 31 | 247 | 37 | 250 | 2.20e-24 | 101 |
| MS.gene99890.t1 | MTR_4g094360 | 24.734 | 376 | 191 | 9 | 8 | 301 | 17 | 382 | 1.17e-23 | 100 |
| MS.gene99890.t1 | MTR_8g006090 | 32.159 | 227 | 149 | 3 | 8 | 231 | 14 | 238 | 1.23e-23 | 98.2 |
| MS.gene99890.t1 | MTR_8g006090 | 27.011 | 348 | 196 | 7 | 8 | 299 | 14 | 359 | 1.26e-23 | 99.4 |
| MS.gene99890.t1 | MTR_8g006090 | 32.159 | 227 | 149 | 3 | 8 | 231 | 14 | 238 | 2.03e-23 | 97.8 |
| MS.gene99890.t1 | MTR_4g094360 | 28.287 | 251 | 159 | 4 | 8 | 247 | 17 | 257 | 1.05e-22 | 96.3 |
| MS.gene99890.t1 | MTR_4g094362 | 26.033 | 242 | 175 | 2 | 8 | 247 | 17 | 256 | 6.15e-22 | 95.1 |
| MS.gene99890.t1 | MTR_3g112480 | 36.709 | 158 | 73 | 4 | 113 | 253 | 1 | 148 | 3.13e-21 | 91.3 |
| MS.gene99890.t1 | MTR_6g007743 | 25.387 | 323 | 168 | 10 | 22 | 284 | 30 | 339 | 1.46e-20 | 90.9 |
| MS.gene99890.t1 | MTR_6g007757 | 29.694 | 229 | 150 | 6 | 22 | 247 | 30 | 250 | 1.48e-20 | 89.4 |
| MS.gene99890.t1 | MTR_6g007740 | 24.478 | 335 | 185 | 10 | 8 | 284 | 15 | 339 | 1.84e-20 | 91.7 |
| MS.gene99890.t1 | MTR_4g129650 | 27.350 | 234 | 110 | 7 | 104 | 283 | 3 | 230 | 1.94e-20 | 89.0 |
| MS.gene99890.t1 | MTR_6g007757 | 29.694 | 229 | 150 | 6 | 22 | 247 | 30 | 250 | 2.72e-20 | 90.1 |
| MS.gene99890.t1 | MTR_4g094342 | 34.211 | 152 | 100 | 0 | 8 | 159 | 16 | 167 | 5.35e-20 | 87.8 |
| MS.gene99890.t1 | MTR_4g100840 | 27.753 | 227 | 160 | 3 | 11 | 234 | 20 | 245 | 5.46e-20 | 89.0 |
| MS.gene99890.t1 | MTR_6g007750 | 26.183 | 317 | 169 | 8 | 26 | 284 | 33 | 342 | 1.09e-19 | 88.6 |
| MS.gene99890.t1 | MTR_0103s0090 | 33.939 | 165 | 96 | 3 | 88 | 247 | 3 | 159 | 1.64e-19 | 86.7 |
| MS.gene99890.t1 | MTR_1g014790 | 36.290 | 124 | 75 | 2 | 78 | 198 | 36 | 158 | 8.37e-18 | 80.5 |
| MS.gene99890.t1 | MTR_4g094360 | 24.567 | 289 | 126 | 9 | 95 | 301 | 57 | 335 | 4.19e-17 | 80.9 |
| MS.gene99890.t1 | MTR_8g006090 | 34.868 | 152 | 95 | 2 | 82 | 231 | 9 | 158 | 1.34e-16 | 77.4 |
| MS.gene99890.t1 | MTR_8g006090 | 27.106 | 273 | 142 | 6 | 82 | 299 | 9 | 279 | 1.49e-16 | 78.6 |
| MS.gene99890.t1 | MTR_6g007753 | 24.126 | 286 | 156 | 5 | 55 | 284 | 343 | 623 | 4.60e-16 | 79.0 |
| MS.gene99890.t1 | MTR_5g012650 | 24.534 | 322 | 184 | 7 | 11 | 276 | 14 | 332 | 6.17e-15 | 74.7 |
| MS.gene99890.t1 | MTR_4g094348 | 30.952 | 126 | 78 | 2 | 90 | 206 | 7 | 132 | 1.43e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99890.t1 | AT4G08290 | 59.375 | 256 | 98 | 4 | 1 | 253 | 8 | 260 | 4.26e-106 | 310 |
| MS.gene99890.t1 | AT4G08290 | 59.144 | 257 | 99 | 4 | 1 | 254 | 8 | 261 | 1.72e-104 | 310 |
| MS.gene99890.t1 | AT4G08300 | 41.226 | 359 | 139 | 6 | 1 | 300 | 6 | 351 | 1.93e-84 | 258 |
| MS.gene99890.t1 | AT1G44800 | 40.678 | 354 | 143 | 7 | 1 | 298 | 6 | 348 | 2.68e-83 | 255 |
| MS.gene99890.t1 | AT1G21890 | 47.529 | 263 | 127 | 2 | 1 | 254 | 6 | 266 | 5.79e-81 | 250 |
| MS.gene99890.t1 | AT1G21890 | 47.710 | 262 | 126 | 2 | 1 | 253 | 6 | 265 | 1.15e-80 | 248 |
| MS.gene99890.t1 | AT2G37460 | 45.490 | 255 | 134 | 3 | 1 | 254 | 10 | 260 | 5.36e-77 | 239 |
| MS.gene99890.t1 | AT2G39510 | 41.473 | 258 | 148 | 3 | 7 | 263 | 9 | 264 | 1.86e-68 | 218 |
| MS.gene99890.t1 | AT2G40900 | 41.221 | 262 | 147 | 2 | 2 | 263 | 7 | 261 | 1.10e-67 | 216 |
| MS.gene99890.t1 | AT3G56620 | 40.840 | 262 | 149 | 2 | 2 | 263 | 7 | 262 | 4.25e-66 | 211 |
| MS.gene99890.t1 | AT5G07050 | 41.176 | 255 | 140 | 3 | 7 | 253 | 19 | 271 | 1.08e-65 | 211 |
| MS.gene99890.t1 | AT2G37450 | 36.023 | 347 | 143 | 6 | 1 | 293 | 4 | 325 | 9.68e-58 | 189 |
| MS.gene99890.t1 | AT1G75500 | 36.162 | 271 | 164 | 3 | 7 | 268 | 21 | 291 | 2.37e-54 | 181 |
| MS.gene99890.t1 | AT1G75500 | 36.162 | 271 | 164 | 3 | 7 | 268 | 21 | 291 | 2.37e-54 | 181 |
| MS.gene99890.t1 | AT5G13670 | 31.627 | 332 | 173 | 5 | 2 | 279 | 4 | 335 | 1.46e-52 | 176 |
| MS.gene99890.t1 | AT3G18200 | 36.842 | 247 | 148 | 5 | 8 | 252 | 37 | 277 | 3.97e-49 | 168 |
| MS.gene99890.t1 | AT3G53210 | 37.209 | 258 | 149 | 4 | 2 | 253 | 6 | 256 | 1.15e-48 | 163 |
| MS.gene99890.t1 | AT3G53210 | 37.209 | 258 | 149 | 4 | 2 | 253 | 6 | 256 | 1.49e-47 | 163 |
| MS.gene99890.t1 | AT5G64700 | 31.559 | 263 | 171 | 2 | 1 | 256 | 3 | 263 | 4.32e-42 | 146 |
| MS.gene99890.t1 | AT2G37450 | 36.576 | 257 | 105 | 5 | 91 | 293 | 1 | 253 | 1.39e-41 | 145 |
| MS.gene99890.t1 | AT3G30340 | 29.316 | 307 | 165 | 3 | 28 | 282 | 33 | 339 | 2.42e-41 | 147 |
| MS.gene99890.t1 | AT5G64700 | 31.022 | 274 | 180 | 2 | 1 | 267 | 3 | 274 | 1.57e-40 | 144 |
| MS.gene99890.t1 | AT3G30340 | 32.599 | 227 | 150 | 2 | 28 | 253 | 33 | 257 | 5.27e-40 | 141 |
| MS.gene99890.t1 | AT1G09380 | 32.677 | 254 | 157 | 4 | 7 | 252 | 9 | 256 | 3.08e-38 | 139 |
| MS.gene99890.t1 | AT4G01450 | 35.047 | 214 | 133 | 3 | 28 | 241 | 32 | 239 | 2.03e-37 | 134 |
| MS.gene99890.t1 | AT4G01450 | 35.377 | 212 | 131 | 3 | 28 | 239 | 32 | 237 | 1.65e-36 | 134 |
| MS.gene99890.t1 | AT4G01450 | 35.047 | 214 | 133 | 3 | 28 | 241 | 32 | 239 | 1.99e-36 | 134 |
| MS.gene99890.t1 | AT1G01070 | 33.333 | 249 | 158 | 4 | 27 | 271 | 37 | 281 | 2.49e-36 | 134 |
| MS.gene99890.t1 | AT4G01440 | 28.916 | 249 | 155 | 1 | 28 | 254 | 32 | 280 | 9.52e-36 | 131 |
| MS.gene99890.t1 | AT4G01440 | 31.050 | 219 | 149 | 1 | 15 | 233 | 21 | 237 | 1.10e-35 | 129 |
| MS.gene99890.t1 | AT4G01440 | 28.916 | 249 | 155 | 1 | 28 | 254 | 32 | 280 | 2.15e-35 | 131 |
| MS.gene99890.t1 | AT1G11450 | 32.653 | 245 | 157 | 4 | 27 | 268 | 37 | 276 | 6.59e-34 | 126 |
| MS.gene99890.t1 | AT1G11450 | 29.870 | 308 | 159 | 8 | 27 | 280 | 37 | 341 | 7.23e-34 | 127 |
| MS.gene99890.t1 | AT4G30420 | 28.981 | 314 | 169 | 4 | 13 | 272 | 6 | 319 | 8.06e-34 | 127 |
| MS.gene99890.t1 | AT4G30420 | 28.981 | 314 | 169 | 4 | 13 | 272 | 16 | 329 | 9.87e-34 | 127 |
| MS.gene99890.t1 | AT1G11460 | 33.466 | 251 | 154 | 6 | 27 | 271 | 37 | 280 | 4.78e-33 | 124 |
| MS.gene99890.t1 | AT4G01450 | 35.176 | 199 | 125 | 2 | 28 | 226 | 32 | 226 | 5.78e-33 | 122 |
| MS.gene99890.t1 | AT4G01430 | 35.345 | 232 | 140 | 7 | 27 | 252 | 30 | 257 | 9.04e-33 | 123 |
| MS.gene99890.t1 | AT4G01430 | 35.345 | 232 | 140 | 7 | 27 | 252 | 30 | 257 | 9.88e-33 | 124 |
| MS.gene99890.t1 | AT1G11450 | 30.169 | 295 | 149 | 8 | 40 | 280 | 6 | 297 | 7.53e-32 | 120 |
| MS.gene99890.t1 | AT5G45370 | 32.870 | 216 | 134 | 2 | 18 | 231 | 32 | 238 | 1.44e-31 | 120 |
| MS.gene99890.t1 | AT1G43650 | 32.510 | 243 | 159 | 2 | 11 | 253 | 12 | 249 | 1.76e-31 | 118 |
| MS.gene99890.t1 | AT1G43650 | 30.451 | 266 | 160 | 2 | 11 | 254 | 12 | 274 | 3.47e-31 | 119 |
| MS.gene99890.t1 | AT3G45870 | 30.126 | 239 | 156 | 1 | 7 | 234 | 13 | 251 | 3.55e-31 | 118 |
| MS.gene99890.t1 | AT3G53210 | 40.571 | 175 | 97 | 3 | 82 | 253 | 29 | 199 | 4.40e-31 | 118 |
| MS.gene99890.t1 | AT3G45870 | 30.126 | 239 | 156 | 1 | 7 | 234 | 13 | 251 | 4.65e-31 | 120 |
| MS.gene99890.t1 | AT3G45870 | 30.126 | 239 | 156 | 1 | 7 | 234 | 13 | 251 | 5.57e-31 | 119 |
| MS.gene99890.t1 | AT5G45370 | 31.624 | 234 | 137 | 3 | 18 | 231 | 32 | 262 | 1.02e-30 | 119 |
| MS.gene99890.t1 | AT5G45370 | 31.624 | 234 | 137 | 3 | 18 | 231 | 32 | 262 | 1.02e-30 | 119 |
| MS.gene99890.t1 | AT5G40230 | 29.573 | 328 | 158 | 9 | 22 | 283 | 38 | 358 | 1.02e-30 | 119 |
| MS.gene99890.t1 | AT1G11450 | 29.897 | 291 | 147 | 8 | 44 | 280 | 3 | 290 | 1.34e-30 | 117 |
| MS.gene99890.t1 | AT1G25270 | 32.800 | 250 | 154 | 6 | 11 | 253 | 8 | 250 | 9.14e-30 | 116 |
| MS.gene99890.t1 | AT4G28040 | 27.385 | 325 | 168 | 8 | 11 | 280 | 13 | 324 | 4.52e-29 | 114 |
| MS.gene99890.t1 | AT4G28040 | 27.385 | 325 | 168 | 8 | 11 | 280 | 13 | 324 | 4.52e-29 | 114 |
| MS.gene99890.t1 | AT4G28040 | 27.385 | 325 | 168 | 8 | 11 | 280 | 13 | 324 | 4.52e-29 | 114 |
| MS.gene99890.t1 | AT4G28040 | 27.385 | 325 | 168 | 8 | 11 | 280 | 13 | 324 | 4.52e-29 | 114 |
| MS.gene99890.t1 | AT4G28040 | 27.385 | 325 | 168 | 8 | 11 | 280 | 13 | 324 | 4.52e-29 | 114 |
| MS.gene99890.t1 | AT1G01070 | 32.143 | 224 | 144 | 4 | 52 | 271 | 15 | 234 | 1.05e-28 | 112 |
| MS.gene99890.t1 | AT1G68170 | 32.389 | 247 | 162 | 2 | 11 | 254 | 18 | 262 | 9.09e-28 | 110 |
| MS.gene99890.t1 | AT1G68170 | 32.389 | 247 | 162 | 2 | 11 | 254 | 8 | 252 | 9.13e-28 | 110 |
| MS.gene99890.t1 | AT2G37450 | 33.043 | 230 | 96 | 5 | 118 | 293 | 61 | 286 | 1.50e-27 | 108 |
| MS.gene99890.t1 | AT4G19185 | 32.159 | 227 | 137 | 2 | 18 | 228 | 33 | 258 | 2.46e-27 | 110 |
| MS.gene99890.t1 | AT3G28130 | 30.973 | 226 | 149 | 5 | 26 | 247 | 33 | 255 | 3.43e-27 | 107 |
| MS.gene99890.t1 | AT1G70260 | 28.870 | 239 | 152 | 4 | 22 | 248 | 28 | 260 | 6.52e-27 | 108 |
| MS.gene99890.t1 | AT3G28130 | 29.960 | 247 | 158 | 6 | 26 | 260 | 33 | 276 | 1.07e-26 | 107 |
| MS.gene99890.t1 | AT3G28130 | 32.240 | 183 | 113 | 3 | 88 | 260 | 9 | 190 | 1.79e-25 | 102 |
| MS.gene99890.t1 | AT3G28130 | 32.240 | 183 | 113 | 3 | 88 | 260 | 9 | 190 | 1.79e-25 | 102 |
| MS.gene99890.t1 | AT4G24980 | 34.831 | 178 | 90 | 3 | 27 | 203 | 8 | 160 | 2.93e-25 | 102 |
| MS.gene99890.t1 | AT3G28100 | 29.876 | 241 | 162 | 5 | 11 | 247 | 19 | 256 | 6.43e-25 | 101 |
| MS.gene99890.t1 | AT3G28080 | 32.461 | 191 | 121 | 4 | 62 | 248 | 71 | 257 | 1.21e-24 | 102 |
| MS.gene99890.t1 | AT1G11450 | 29.482 | 251 | 120 | 8 | 84 | 280 | 2 | 249 | 2.13e-24 | 99.8 |
| MS.gene99890.t1 | AT3G28100 | 29.876 | 241 | 162 | 5 | 11 | 247 | 19 | 256 | 2.76e-24 | 101 |
| MS.gene99890.t1 | AT3G28080 | 33.333 | 162 | 105 | 2 | 89 | 248 | 8 | 168 | 2.96e-24 | 99.4 |
| MS.gene99890.t1 | AT3G28080 | 33.333 | 162 | 105 | 2 | 89 | 248 | 8 | 168 | 2.96e-24 | 99.4 |
| MS.gene99890.t1 | AT3G28080 | 33.333 | 162 | 105 | 2 | 89 | 248 | 8 | 168 | 2.96e-24 | 99.4 |
| MS.gene99890.t1 | AT3G28080 | 33.333 | 162 | 105 | 2 | 89 | 248 | 8 | 168 | 2.96e-24 | 99.4 |
| MS.gene99890.t1 | AT3G28070 | 34.524 | 168 | 95 | 3 | 88 | 247 | 7 | 167 | 3.42e-24 | 99.4 |
| MS.gene99890.t1 | AT5G40240 | 27.157 | 313 | 167 | 7 | 22 | 277 | 37 | 345 | 4.19e-24 | 100 |
| MS.gene99890.t1 | AT5G40240 | 27.157 | 313 | 167 | 7 | 22 | 277 | 37 | 345 | 4.19e-24 | 100 |
| MS.gene99890.t1 | AT5G40240 | 27.157 | 313 | 167 | 7 | 22 | 277 | 51 | 359 | 6.13e-24 | 100 |
| MS.gene99890.t1 | AT3G28070 | 34.568 | 162 | 103 | 2 | 88 | 247 | 99 | 259 | 8.60e-24 | 99.4 |
| MS.gene99890.t1 | AT3G28080 | 33.333 | 162 | 105 | 2 | 89 | 248 | 89 | 249 | 1.46e-23 | 99.0 |
| MS.gene99890.t1 | AT3G28070 | 34.568 | 162 | 103 | 2 | 88 | 247 | 99 | 259 | 1.54e-23 | 99.4 |
| MS.gene99890.t1 | AT3G28050 | 27.451 | 306 | 159 | 8 | 22 | 272 | 29 | 326 | 5.06e-23 | 97.8 |
| MS.gene99890.t1 | AT5G47470 | 28.070 | 228 | 151 | 4 | 11 | 234 | 35 | 253 | 3.43e-22 | 95.5 |
| MS.gene99890.t1 | AT5G47470 | 28.070 | 228 | 151 | 4 | 11 | 234 | 63 | 281 | 4.32e-22 | 95.5 |
| MS.gene99890.t1 | AT5G47470 | 28.070 | 228 | 151 | 4 | 11 | 234 | 63 | 281 | 4.70e-22 | 95.5 |
| MS.gene99890.t1 | AT1G60050 | 29.958 | 237 | 154 | 5 | 22 | 248 | 29 | 263 | 2.85e-21 | 93.2 |
| MS.gene99890.t1 | AT3G18200 | 33.333 | 153 | 94 | 5 | 102 | 252 | 1 | 147 | 4.29e-21 | 90.5 |
| MS.gene99890.t1 | AT4G15540 | 25.075 | 335 | 188 | 6 | 11 | 293 | 22 | 345 | 4.69e-21 | 92.0 |
| MS.gene99890.t1 | AT4G15540 | 25.075 | 335 | 188 | 6 | 11 | 293 | 22 | 345 | 4.69e-21 | 92.0 |
| MS.gene99890.t1 | AT5G40210 | 25.703 | 249 | 163 | 7 | 2 | 247 | 8 | 237 | 6.70e-20 | 88.6 |
| MS.gene99890.t1 | AT3G28130 | 35.036 | 137 | 85 | 3 | 26 | 160 | 33 | 167 | 9.75e-19 | 83.2 |
| MS.gene99890.t1 | AT3G28100 | 30.729 | 192 | 127 | 4 | 11 | 198 | 19 | 208 | 7.28e-18 | 81.6 |
| MS.gene99890.t1 | AT3G28080 | 34.459 | 148 | 90 | 3 | 62 | 205 | 71 | 215 | 1.28e-17 | 82.0 |
| MS.gene99890.t1 | AT4G01440 | 25.294 | 170 | 105 | 1 | 107 | 254 | 3 | 172 | 2.65e-17 | 80.1 |
| MS.gene99890.t1 | AT4G01440 | 25.294 | 170 | 105 | 1 | 107 | 254 | 3 | 172 | 2.65e-17 | 80.1 |
| MS.gene99890.t1 | AT3G28080 | 36.134 | 119 | 74 | 1 | 89 | 205 | 8 | 126 | 3.86e-17 | 79.0 |
| MS.gene99890.t1 | AT4G19185 | 31.481 | 162 | 94 | 2 | 83 | 228 | 20 | 180 | 6.49e-17 | 80.1 |
| MS.gene99890.t1 | AT5G45370 | 30.675 | 163 | 90 | 3 | 89 | 231 | 1 | 160 | 2.84e-16 | 77.8 |
| MS.gene99890.t1 | AT5G45370 | 30.675 | 163 | 90 | 3 | 89 | 231 | 1 | 160 | 2.84e-16 | 77.8 |
| MS.gene99890.t1 | AT4G16620 | 27.014 | 211 | 151 | 3 | 14 | 223 | 20 | 228 | 1.49e-15 | 75.5 |
| MS.gene99890.t1 | AT4G16620 | 27.014 | 211 | 151 | 3 | 14 | 223 | 20 | 228 | 2.16e-15 | 76.3 |
| MS.gene99890.t1 | AT3G28130 | 28.947 | 152 | 97 | 3 | 119 | 260 | 1 | 151 | 6.97e-13 | 67.4 |
| MS.gene99890.t1 | AT3G28080 | 29.008 | 131 | 90 | 2 | 120 | 248 | 2 | 131 | 9.71e-12 | 63.9 |
| MS.gene99890.t1 | AT3G45870 | 30.323 | 155 | 94 | 3 | 91 | 234 | 25 | 176 | 1.15e-11 | 64.3 |
| MS.gene99890.t1 | AT3G45870 | 30.323 | 155 | 94 | 3 | 91 | 234 | 25 | 176 | 1.15e-11 | 64.3 |
| MS.gene99890.t1 | AT3G28070 | 31.387 | 137 | 79 | 3 | 119 | 247 | 1 | 130 | 1.22e-11 | 63.9 |
| MS.gene99890.t1 | AT3G45870 | 30.323 | 155 | 94 | 3 | 91 | 234 | 25 | 176 | 1.58e-11 | 63.2 |
| MS.gene99890.t1 | AT3G45870 | 30.323 | 155 | 94 | 3 | 91 | 234 | 25 | 176 | 1.96e-11 | 63.9 |
| MS.gene99890.t1 | AT3G45870 | 30.159 | 126 | 77 | 1 | 120 | 234 | 4 | 129 | 7.23e-11 | 60.1 |
Find 71 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCTTGAGGTTTGGGCTAT+TGG | 0.175402 | 3.2:-65352982 | MS.gene99890:CDS |
| TCAACCTTAATATGCTTAAT+TGG | 0.206118 | 3.2:-65353051 | MS.gene99890:CDS |
| GATCAAGGATTTACTTTCTT+GGG | 0.226580 | 3.2:-65353687 | MS.gene99890:CDS |
| TAGACATCAGTTGAAGTAAT+TGG | 0.249851 | 3.2:+65351625 | None:intergenic |
| GTCACTCTGGTCTTGAGGTT+TGG | 0.255637 | 3.2:-65352990 | MS.gene99890:CDS |
| GCACTTCAATTTGGGTTTGC+AGG | 0.256620 | 3.2:-65356156 | MS.gene99890:CDS |
| TACAACTTTGCAGGAAAATT+AGG | 0.260312 | 3.2:-65355596 | MS.gene99890:intron |
| GGCACCAATTAAGCATATTA+AGG | 0.276307 | 3.2:+65353047 | None:intergenic |
| GGTTGGGACTTTAGACTATA+TGG | 0.302017 | 3.2:-65352961 | MS.gene99890:CDS |
| TTAACGGTGGCACTTCAATT+TGG | 0.325006 | 3.2:-65356165 | MS.gene99890:CDS |
| GGGACATTAGTAACCTTTGC+AGG | 0.325264 | 3.2:-65353386 | MS.gene99890:CDS |
| AAGACACCCATTGTCATCTT+TGG | 0.325604 | 3.2:+65355573 | None:intergenic |
| TCACTCTGGTCTTGAGGTTT+GGG | 0.326320 | 3.2:-65352989 | MS.gene99890:CDS |
| TTGAGGTTTGGGCTATTGGT+TGG | 0.342298 | 3.2:-65352978 | MS.gene99890:CDS |
| AGATCAAGGATTTACTTTCT+TGG | 0.355086 | 3.2:-65353688 | MS.gene99890:CDS |
| TCAGTTTGCTTCATTGCAAC+TGG | 0.357064 | 3.2:+65351658 | None:intergenic |
| TAACGGTGGCACTTCAATTT+GGG | 0.361637 | 3.2:-65356164 | MS.gene99890:CDS |
| TGAGGTTTGGGCTATTGGTT+GGG | 0.366132 | 3.2:-65352977 | MS.gene99890:CDS |
| ATTTGGTTACCTGAAAATTA+CGG | 0.378910 | 3.2:+65353593 | None:intergenic |
| AGGAACACTCTTTCTAATGA+TGG | 0.410004 | 3.2:-65353252 | MS.gene99890:CDS |
| ACTCTCAAACATTGGGTCTC+AGG | 0.410947 | 3.2:-65353272 | MS.gene99890:CDS |
| GGTAATAAAATGAATAAGGC+AGG | 0.427576 | 3.2:-65356198 | None:intergenic |
| GGGTCTATATTCTGTGGTGT+GGG | 0.434106 | 3.2:-65351728 | MS.gene99890:CDS |
| CGAAGCATAGCAAAAGTGAT+TGG | 0.452310 | 3.2:-65353407 | MS.gene99890:CDS |
| TTTAGGCCAGTGATAGATCA+AGG | 0.452691 | 3.2:-65353702 | MS.gene99890:intron |
| ACACGCAAACTCTCAAACAT+TGG | 0.463592 | 3.2:-65353280 | MS.gene99890:CDS |
| GGGTGTCTTTGTGCGGATAA+TGG | 0.463680 | 3.2:-65355559 | MS.gene99890:CDS |
| GGCAGGGCATTATGTGTTAA+CGG | 0.464335 | 3.2:-65356181 | MS.gene99890:CDS |
| GTTGATAGTGACATTTCTGC+TGG | 0.464929 | 3.2:+65353069 | None:intergenic |
| TAATGATGGGTTGTGTGGCT+TGG | 0.467472 | 3.2:-65353238 | MS.gene99890:CDS |
| TGGGTCTATATTCTGTGGTG+TGG | 0.473719 | 3.2:-65351729 | MS.gene99890:CDS |
| TGCTTCATTGCAACTGGTGA+TGG | 0.475348 | 3.2:+65351664 | None:intergenic |
| CACGCAAACTCTCAAACATT+GGG | 0.482922 | 3.2:-65353279 | MS.gene99890:CDS |
| ATTCATTCCCATGTTGAGAC+TGG | 0.492222 | 3.2:+65356113 | None:intergenic |
| ATTAGGCCAAAGATGACAAT+GGG | 0.506829 | 3.2:-65355579 | MS.gene99890:CDS |
| CTCCATGGCCAGTCTCAACA+TGG | 0.517219 | 3.2:-65356121 | MS.gene99890:CDS |
| GGAACACTCTTTCTAATGAT+GGG | 0.519597 | 3.2:-65353251 | MS.gene99890:CDS |
| GAAGCATAGCAAAAGTGATT+GGG | 0.521865 | 3.2:-65353406 | MS.gene99890:CDS |
| GTAAATCCTTGATCTATCAC+TGG | 0.527191 | 3.2:+65353696 | None:intergenic |
| TCCCATGTTGAGACTGGCCA+TGG | 0.532428 | 3.2:+65356119 | None:intergenic |
| TTCATTGCTGAGCGTCACTC+TGG | 0.533655 | 3.2:-65353003 | MS.gene99890:CDS |
| CTTTCTAATGATGGGTTGTG+TGG | 0.538049 | 3.2:-65353243 | MS.gene99890:CDS |
| GAATAGAAAAGGTGAATTTG+TGG | 0.542285 | 3.2:+65353335 | None:intergenic |
| ATCAAGGATTTACTTTCTTG+GGG | 0.542739 | 3.2:-65353686 | MS.gene99890:CDS |
| AATAGAAAAGGTGAATTTGT+GGG | 0.544421 | 3.2:+65353336 | None:intergenic |
| CTTGGGGATGCAATATACAT+CGG | 0.549174 | 3.2:-65353670 | MS.gene99890:CDS |
| TGCCACCACACTAGTTTGCA+TGG | 0.549697 | 3.2:+65353026 | None:intergenic |
| TGAGCGTCACTCTGGTCTTG+AGG | 0.557312 | 3.2:-65352995 | MS.gene99890:CDS |
| CAGAGCAACTCCACTTGGGA+AGG | 0.561936 | 3.2:-65351999 | MS.gene99890:intron |
| GGACATTAGTAACCTTTGCA+GGG | 0.563644 | 3.2:-65353385 | MS.gene99890:CDS |
| TTCATTGCAACTGGTGATGG+TGG | 0.573404 | 3.2:+65351667 | None:intergenic |
| GGTCTATATTCTGTGGTGTG+GGG | 0.589276 | 3.2:-65351727 | MS.gene99890:CDS |
| GCAACTGGTGATGGTGGCAT+AGG | 0.594061 | 3.2:+65351673 | None:intergenic |
| TTTGCAGAGCAACTCCACTT+GGG | 0.594536 | 3.2:-65352003 | MS.gene99890:intron |
| AATTAGGCCAAAGATGACAA+TGG | 0.598592 | 3.2:-65355580 | MS.gene99890:CDS |
| CATCATCAATGCCCCTGCAA+AGG | 0.600667 | 3.2:+65353373 | None:intergenic |
| GTAATAAAATGAATAAGGCA+GGG | 0.617635 | 3.2:-65356197 | None:intergenic |
| GAAAATTACGGCTAGCACAA+AGG | 0.618070 | 3.2:+65353605 | None:intergenic |
| TAATAGAGTACCGTGTAGAG+AGG | 0.618694 | 3.2:+65352937 | None:intergenic |
| TTAGAAGTTACCTTCCCAAG+TGG | 0.619720 | 3.2:+65351989 | None:intergenic |
| TGCAGTGGGTCTATATTCTG+TGG | 0.631521 | 3.2:-65351734 | MS.gene99890:intron |
| AGGAGCATACATATTCTCCA+TGG | 0.632777 | 3.2:-65356136 | MS.gene99890:CDS |
| GCTAGCACAAAGGTAACAGA+AGG | 0.636570 | 3.2:+65353615 | None:intergenic |
| GACATTAGTAACCTTTGCAG+GGG | 0.641806 | 3.2:-65353384 | MS.gene99890:CDS |
| ACTATATGGTCCTCTCTACA+CGG | 0.654238 | 3.2:-65352947 | MS.gene99890:intron |
| TCCATGGCCAGTCTCAACAT+GGG | 0.656868 | 3.2:-65356120 | MS.gene99890:CDS |
| TTGATGATGATACTTTACAA+AGG | 0.659362 | 3.2:-65353359 | MS.gene99890:CDS |
| TGCCATGCAAACTAGTGTGG+TGG | 0.675189 | 3.2:-65353028 | MS.gene99890:CDS |
| TGGTGCCATGCAAACTAGTG+TGG | 0.679552 | 3.2:-65353031 | MS.gene99890:CDS |
| TGACAATGGGTGTCTTTGTG+CGG | 0.682941 | 3.2:-65355566 | MS.gene99890:CDS |
| AGGGCATTATGTGTTAACGG+TGG | 0.766591 | 3.2:-65356178 | MS.gene99890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAATAATTTTTTATT+AGG | - | chr3.2:65353440-65353459 | MS.gene99890:intron | 0.0% |
| !! | ATATATATATGAAAAAAGTT+AGG | + | chr3.2:65354913-65354932 | None:intergenic | 10.0% |
| !! | TATATATATGAAAAAAGTTA+GGG | + | chr3.2:65354912-65354931 | None:intergenic | 10.0% |
| !! | TCCTAATATATTAAAATTAA+AGG | - | chr3.2:65354252-65354271 | MS.gene99890:intron | 10.0% |
| !! | TGTAATTAAGATTATAAATT+TGG | + | chr3.2:65355474-65355493 | None:intergenic | 10.0% |
| !!! | ACCTTTAATTTTAATATATT+AGG | + | chr3.2:65354256-65354275 | None:intergenic | 10.0% |
| !!! | TATGCTTTATTTTAATATAT+GGG | - | chr3.2:65355428-65355447 | MS.gene99890:intron | 10.0% |
| !!! | TCATTTTCTTTATAAAATTT+TGG | - | chr3.2:65353337-65353356 | MS.gene99890:CDS | 10.0% |
| !!! | TTATGCTTTATTTTAATATA+TGG | - | chr3.2:65355427-65355446 | MS.gene99890:intron | 10.0% |
| !!! | TTTTCTTTAAAGATATTTAA+AGG | - | chr3.2:65352154-65352173 | MS.gene99890:intron | 10.0% |
| !! | AAAACACTTTCATAAAAAAA+AGG | + | chr3.2:65354636-65354655 | None:intergenic | 15.0% |
| !! | AAACACTTTCATAAAAAAAA+GGG | + | chr3.2:65354635-65354654 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr3.2:65353839-65353858 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr3.2:65353838-65353857 | MS.gene99890:intron | 15.0% |
| !! | AATGATTAAAAGAAAGAAAA+TGG | + | chr3.2:65353872-65353891 | None:intergenic | 15.0% |
| !! | ATGCAAAAATAGTAAATAAT+TGG | - | chr3.2:65353408-65353427 | MS.gene99890:CDS | 15.0% |
| !! | GTCATTTATCAAATTATTAT+TGG | + | chr3.2:65355991-65356010 | None:intergenic | 15.0% |
| !! | TATATTAAAATTAAAGGTCT+TGG | - | chr3.2:65354258-65354277 | MS.gene99890:intron | 15.0% |
| !! | TGAATTACTAACAAAAATTA+GGG | - | chr3.2:65352679-65352698 | MS.gene99890:intron | 15.0% |
| !! | TGCAAAAATAGTAAATAATT+GGG | - | chr3.2:65353409-65353428 | MS.gene99890:CDS | 15.0% |
| !! | TTATACATTTAAATAAGTGT+AGG | + | chr3.2:65353639-65353658 | None:intergenic | 15.0% |
| !! | TTGAATTACTAACAAAAATT+AGG | - | chr3.2:65352678-65352697 | MS.gene99890:intron | 15.0% |
| !!! | AAATAAAGCATAATTTTGAT+TGG | + | chr3.2:65355420-65355439 | None:intergenic | 15.0% |
| !!! | ATGCTTTATTTTAATATATG+GGG | - | chr3.2:65355429-65355448 | MS.gene99890:intron | 15.0% |
| !!! | CAATGAATTTAAAATTTTCA+GGG | - | chr3.2:65355663-65355682 | MS.gene99890:intron | 15.0% |
| !!! | GATAAATAATTGTTGATTTT+TGG | - | chr3.2:65355090-65355109 | MS.gene99890:intron | 15.0% |
| !!! | TACTATCCATATTTTTTTTA+GGG | + | chr3.2:65352502-65352521 | None:intergenic | 15.0% |
| !!! | TCAATGAATTTAAAATTTTC+AGG | - | chr3.2:65355662-65355681 | MS.gene99890:intron | 15.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr3.2:65353829-65353848 | MS.gene99890:intron | 20.0% |
| !! | AACACTTTCATAAAAAAAAG+GGG | + | chr3.2:65354634-65354653 | None:intergenic | 20.0% |
| !! | AAGAGAAATAAGTATTTCAA+GGG | - | chr3.2:65352548-65352567 | MS.gene99890:intron | 20.0% |
| !! | ACATAATTAAATGTAATCAG+AGG | - | chr3.2:65356009-65356028 | MS.gene99890:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr3.2:65353752-65353771 | None:intergenic | 20.0% |
| !! | AGTTTACAAAAATATGGTTT+GGG | + | chr3.2:65355345-65355364 | None:intergenic | 20.0% |
| !! | ATCATTCGATTAAGATTTAA+TGG | + | chr3.2:65352051-65352070 | None:intergenic | 20.0% |
| !! | ATGTTAGAAATCACAAAATT+AGG | - | chr3.2:65352907-65352926 | MS.gene99890:intron | 20.0% |
| !! | ATTGTAAAACAGAATAAGTA+AGG | + | chr3.2:65351810-65351829 | None:intergenic | 20.0% |
| !! | GTATGGAATTAAAATATTGA+CGG | - | chr3.2:65351898-65351917 | MS.gene99890:intron | 20.0% |
| !! | TAAGAGAAATAAGTATTTCA+AGG | - | chr3.2:65352547-65352566 | MS.gene99890:intron | 20.0% |
| !! | TAGTTTACAAAAATATGGTT+TGG | + | chr3.2:65355346-65355365 | None:intergenic | 20.0% |
| !! | TGTAGGTCTATTATTAAAAA+GGG | + | chr3.2:65353592-65353611 | None:intergenic | 20.0% |
| !! | TTAAATGCTGTATAAAATAC+TGG | + | chr3.2:65355747-65355766 | None:intergenic | 20.0% |
| !! | TTACATTTAAAGAGAATAAG+TGG | + | chr3.2:65352853-65352872 | None:intergenic | 20.0% |
| !! | TTATATAACCCGAAAAAAAT+AGG | + | chr3.2:65355180-65355199 | None:intergenic | 20.0% |
| !! | TTCAAAAGTTGTCATATAAA+TGG | - | chr3.2:65353364-65353383 | MS.gene99890:CDS | 20.0% |
| !! | TTGATTATAACACAAGTTAA+TGG | + | chr3.2:65354350-65354369 | None:intergenic | 20.0% |
| !! | TTGTAAAACAGAATAAGTAA+GGG | + | chr3.2:65351809-65351828 | None:intergenic | 20.0% |
| !! | TTTCTAACACTTTATAAGTA+TGG | - | chr3.2:65352470-65352489 | MS.gene99890:intron | 20.0% |
| !!! | AAACCATATTTTTGTAAACT+AGG | - | chr3.2:65355345-65355364 | MS.gene99890:intron | 20.0% |
| !!! | AAACTTTTATAAGAAAGAAG+AGG | + | chr3.2:65355854-65355873 | None:intergenic | 20.0% |
| !!! | ACTATCCATATTTTTTTTAG+GGG | + | chr3.2:65352501-65352520 | None:intergenic | 20.0% |
| !!! | CTACTATCCATATTTTTTTT+AGG | + | chr3.2:65352503-65352522 | None:intergenic | 20.0% |
| !!! | TCTTTAAAGATATTTAAAGG+TGG | - | chr3.2:65352157-65352176 | MS.gene99890:intron | 20.0% |
| !!! | TTTTTTTGGCATTAATTCTT+CGG | + | chr3.2:65354317-65354336 | None:intergenic | 20.0% |
| ! | AAAACACTTATCGATAGAAT+TGG | + | chr3.2:65352723-65352742 | None:intergenic | 25.0% |
| ! | AAAAGGGAAATGTTAAGAAA+AGG | + | chr3.2:65353576-65353595 | None:intergenic | 25.0% |
| ! | AATAGAAAAGGTGAATTTGT+GGG | + | chr3.2:65354480-65354499 | None:intergenic | 25.0% |
| ! | AATGATTATCAATGTTTCCA+AGG | - | chr3.2:65352065-65352084 | MS.gene99890:intron | 25.0% |
| ! | ATAGTCCCCTAAAAAAAATA+TGG | - | chr3.2:65352493-65352512 | MS.gene99890:intron | 25.0% |
| ! | ATGAAGTAGCTGTTTAAATT+AGG | - | chr3.2:65355319-65355338 | MS.gene99890:intron | 25.0% |
| ! | ATTATAACACAAGTTAATGG+TGG | + | chr3.2:65354347-65354366 | None:intergenic | 25.0% |
| ! | ATTTAAACAGCTACTTCATT+TGG | + | chr3.2:65355318-65355337 | None:intergenic | 25.0% |
| ! | ATTTGGTTACCTGAAAATTA+CGG | + | chr3.2:65354223-65354242 | None:intergenic | 25.0% |
| ! | CGTAAAAAATTTGTCTCAAT+TGG | - | chr3.2:65354042-65354061 | MS.gene99890:intron | 25.0% |
| ! | GTGTAGGTCTATTATTAAAA+AGG | + | chr3.2:65353593-65353612 | None:intergenic | 25.0% |
| ! | TATTAGGAGAACCTATAATT+TGG | + | chr3.2:65354240-65354259 | None:intergenic | 25.0% |
| ! | TCAACCTTAATATGCTTAAT+TGG | - | chr3.2:65354762-65354781 | MS.gene99890:intron | 25.0% |
| ! | TGTGTTATAATCAATGTATC+AGG | - | chr3.2:65354356-65354375 | MS.gene99890:intron | 25.0% |
| ! | TTAAACACACAAAATTGAGT+CGG | - | chr3.2:65353005-65353024 | MS.gene99890:CDS | 25.0% |
| ! | TTTCTCTTTCTCTATTACTT+TGG | - | chr3.2:65353298-65353317 | MS.gene99890:CDS | 25.0% |
| !! | GTACCATTTGGTATTATTTT+AGG | - | chr3.2:65354094-65354113 | MS.gene99890:intron | 25.0% |
| !! | TATCATTTCTCTTTTGCATA+TGG | + | chr3.2:65353212-65353231 | None:intergenic | 25.0% |
| !! | TTAAGTTCGAAAAAAAGTGT+AGG | + | chr3.2:65353609-65353628 | None:intergenic | 25.0% |
| !! | TTTGTTGATTACAGTATCAT+TGG | - | chr3.2:65356044-65356063 | MS.gene99890:CDS | 25.0% |
| !! | TTTTTCATTGCATTTGCAAT+AGG | + | chr3.2:65355070-65355089 | None:intergenic | 25.0% |
| !!! | AAACGACACTCATTTTAAAA+CGG | - | chr3.2:65353921-65353940 | MS.gene99890:intron | 25.0% |
| !!! | ATGGTGGTATAAGATTTTTT+TGG | + | chr3.2:65354331-65354350 | None:intergenic | 25.0% |
| !!! | CTATCGATAAGTGTTTTTTT+TGG | - | chr3.2:65352726-65352745 | MS.gene99890:intron | 25.0% |
| !!! | TTGATGATGATACTTTACAA+AGG | - | chr3.2:65354454-65354473 | MS.gene99890:intron | 25.0% |
| !!! | TTTAAAATGAGTGTCGTTTT+AGG | + | chr3.2:65353920-65353939 | None:intergenic | 25.0% |
| !!! | TTTTCAGGTAACCAAATTAT+AGG | - | chr3.2:65354226-65354245 | MS.gene99890:intron | 25.0% |
| AAAGAATAGAATGTCTACCA+AGG | - | chr3.2:65354937-65354956 | MS.gene99890:intron | 30.0% | |
| AAATGTTAACATGTAGCCTT+AGG | + | chr3.2:65354294-65354313 | None:intergenic | 30.0% | |
| ACAAGTGATGATCATACAAA+GGG | + | chr3.2:65355772-65355791 | None:intergenic | 30.0% | |
| ACATGTTTCATTCACTAACT+TGG | - | chr3.2:65351848-65351867 | MS.gene99890:intron | 30.0% | |
| AGAAAAGTGGTAATTAGCAT+AGG | + | chr3.2:65352197-65352216 | None:intergenic | 30.0% | |
| AGATCAAGGATTTACTTTCT+TGG | - | chr3.2:65354125-65354144 | MS.gene99890:intron | 30.0% | |
| ATATCTGATACGTCTCAAAT+AGG | - | chr3.2:65355026-65355045 | MS.gene99890:intron | 30.0% | |
| ATCAAGGATTTACTTTCTTG+GGG | - | chr3.2:65354127-65354146 | MS.gene99890:intron | 30.0% | |
| ATGTATTGTAACGTACCATT+TGG | - | chr3.2:65354082-65354101 | MS.gene99890:intron | 30.0% | |
| CAAAACACGTTAGAATGTTT+CGG | - | chr3.2:65355231-65355250 | MS.gene99890:intron | 30.0% | |
| CGAGTTTGATAAAATCAAGA+TGG | - | chr3.2:65355927-65355946 | MS.gene99890:intron | 30.0% | |
| CTTTCAAAAATGAGTGCAAA+GGG | + | chr3.2:65351777-65351796 | None:intergenic | 30.0% | |
| GAATAGAAAAGGTGAATTTG+TGG | + | chr3.2:65354481-65354500 | None:intergenic | 30.0% | |
| GATCAAGGATTTACTTTCTT+GGG | - | chr3.2:65354126-65354145 | MS.gene99890:intron | 30.0% | |
| GTGCCTAGTTTACAAAAATA+TGG | + | chr3.2:65355351-65355370 | None:intergenic | 30.0% | |
| TACAACTTTGCAGGAAAATT+AGG | - | chr3.2:65352217-65352236 | MS.gene99890:intron | 30.0% | |
| TAGACATCAGTTGAAGTAAT+TGG | + | chr3.2:65356191-65356210 | None:intergenic | 30.0% | |
| TATTAGGTTTAAACCCACTT+GGG | - | chr3.2:65353456-65353475 | MS.gene99890:intron | 30.0% | |
| TCACGTTAATATAACTCAGT+TGG | - | chr3.2:65352780-65352799 | MS.gene99890:intron | 30.0% | |
| TGGCCTAAAATAATACCAAA+TGG | + | chr3.2:65354100-65354119 | None:intergenic | 30.0% | |
| TTATTAGGTTTAAACCCACT+TGG | - | chr3.2:65353455-65353474 | MS.gene99890:intron | 30.0% | |
| TTTCAAAAATGAGTGCAAAG+GGG | + | chr3.2:65351776-65351795 | None:intergenic | 30.0% | |
| ! | GTCATCTTTCTTCATTTTAC+AGG | - | chr3.2:65354597-65354616 | MS.gene99890:intron | 30.0% |
| ! | TGATTTTATCAAACTCGTGA+TGG | + | chr3.2:65355924-65355943 | None:intergenic | 30.0% |
| ! | TTCGGGTTATATAATTCGAA+CGG | - | chr3.2:65355186-65355205 | MS.gene99890:intron | 30.0% |
| ! | TTTTGCATATGGTCATAAGA+GGG | + | chr3.2:65353201-65353220 | None:intergenic | 30.0% |
| !! | ATTGATAACTAGCTCTACAT+AGG | + | chr3.2:65352311-65352330 | None:intergenic | 30.0% |
| !! | TTACTGATTCACTTTGTGTT+TGG | + | chr3.2:65353992-65354011 | None:intergenic | 30.0% |
| !!! | ATTGCGTGTCCTATTTTTTT+CGG | - | chr3.2:65355168-65355187 | MS.gene99890:intron | 30.0% |
| !!! | CGGATTTTAGAATCTGAATA+GGG | - | chr3.2:65355251-65355270 | MS.gene99890:intron | 30.0% |
| !!! | CTGTTTTTGGAGAATAGAAA+AGG | + | chr3.2:65354492-65354511 | None:intergenic | 30.0% |
| !!! | TCGGATTTTAGAATCTGAAT+AGG | - | chr3.2:65355250-65355269 | MS.gene99890:intron | 30.0% |
| AAACGGATGGAGTATAATGT+GGG | + | chr3.2:65353669-65353688 | None:intergenic | 35.0% | |
| AACTTGGATTCCATGTAGTT+GGG | - | chr3.2:65351864-65351883 | MS.gene99890:intron | 35.0% | |
| AAGTCTAAACTCAATCTCCT+TGG | + | chr3.2:65354957-65354976 | None:intergenic | 35.0% | |
| AAGTGATGATCATACAAAGG+GGG | + | chr3.2:65355770-65355789 | None:intergenic | 35.0% | |
| AATAAGTATATCCCGTTGTC+GGG | + | chr3.2:65352107-65352126 | None:intergenic | 35.0% | |
| AATTAGGCCAAAGATGACAA+TGG | - | chr3.2:65352233-65352252 | MS.gene99890:intron | 35.0% | |
| ACAGCTACTTCATTTGGAAA+AGG | + | chr3.2:65355312-65355331 | None:intergenic | 35.0% | |
| AGGAACACTCTTTCTAATGA+TGG | - | chr3.2:65354561-65354580 | MS.gene99890:intron | 35.0% | |
| AGGACACGCAATAAATCAAT+AGG | + | chr3.2:65355160-65355179 | None:intergenic | 35.0% | |
| ATGATCATCACTTGTGCTTT+AGG | - | chr3.2:65355777-65355796 | MS.gene99890:intron | 35.0% | |
| ATTAGGCCAAAGATGACAAT+GGG | - | chr3.2:65352234-65352253 | MS.gene99890:intron | 35.0% | |
| CAAGTGATGATCATACAAAG+GGG | + | chr3.2:65355771-65355790 | None:intergenic | 35.0% | |
| CAATAAGTATATCCCGTTGT+CGG | + | chr3.2:65352108-65352127 | None:intergenic | 35.0% | |
| CACAAGTGATGATCATACAA+AGG | + | chr3.2:65355773-65355792 | None:intergenic | 35.0% | |
| CCAAAAACAGCACATAATTC+TGG | - | chr3.2:65354502-65354521 | MS.gene99890:intron | 35.0% | |
| CCTTTCAAAAATGAGTGCAA+AGG | + | chr3.2:65351778-65351797 | None:intergenic | 35.0% | |
| CTGCAAAGTTGTAAGAAAAG+TGG | + | chr3.2:65352210-65352229 | None:intergenic | 35.0% | |
| GAAGCATAGCAAAAGTGATT+GGG | - | chr3.2:65354407-65354426 | MS.gene99890:intron | 35.0% | |
| GAATAGCGTATTATGTGCAA+GGG | - | chr3.2:65355700-65355719 | MS.gene99890:intron | 35.0% | |
| GAATCAAATATGAGACCATG+AGG | + | chr3.2:65353524-65353543 | None:intergenic | 35.0% | |
| GACGTATCAGATATTAACTG+TGG | + | chr3.2:65355020-65355039 | None:intergenic | 35.0% | |
| GGAACACTCTTTCTAATGAT+GGG | - | chr3.2:65354562-65354581 | MS.gene99890:intron | 35.0% | |
| GGACACGCAATAAATCAATA+GGG | + | chr3.2:65355159-65355178 | None:intergenic | 35.0% | |
| GGCACCAATTAAGCATATTA+AGG | + | chr3.2:65354769-65354788 | None:intergenic | 35.0% | |
| GTAAATCCTTGATCTATCAC+TGG | + | chr3.2:65354120-65354139 | None:intergenic | 35.0% | |
| GTCTCATATTTGATTCTCTC+TGG | - | chr3.2:65353528-65353547 | MS.gene99890:intron | 35.0% | |
| TAACTTGGATTCCATGTAGT+TGG | - | chr3.2:65351863-65351882 | MS.gene99890:intron | 35.0% | |
| TAGTGATCATCACTTGTGTT+CGG | - | chr3.2:65355882-65355901 | MS.gene99890:intron | 35.0% | |
| TGTATAAAATACTGGTCCTC+TGG | + | chr3.2:65355739-65355758 | None:intergenic | 35.0% | |
| TTCAAAAATGAGTGCAAAGG+GGG | + | chr3.2:65351775-65351794 | None:intergenic | 35.0% | |
| TTCACAACATGACAGACAAA+TGG | - | chr3.2:65354975-65354994 | MS.gene99890:intron | 35.0% | |
| TTTCAGGGAATAATTACCTC+AGG | - | chr3.2:65355678-65355697 | MS.gene99890:intron | 35.0% | |
| ! | CACTTTTCTTACAACTTTGC+AGG | - | chr3.2:65352208-65352227 | MS.gene99890:intron | 35.0% |
| ! | CGAAACATTCTAACGTGTTT+TGG | + | chr3.2:65355233-65355252 | None:intergenic | 35.0% |
| ! | CTTTTGCATATGGTCATAAG+AGG | + | chr3.2:65353202-65353221 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr3.2:65353790-65353809 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr3.2:65353786-65353805 | None:intergenic | 35.0% |
| !! | AACATTCTAACGTGTTTTGG+AGG | + | chr3.2:65355230-65355249 | None:intergenic | 35.0% |
| !! | CCTTTGCACTCATTTTTGAA+AGG | - | chr3.2:65351775-65351794 | MS.gene99890:intron | 35.0% |
| !!! | CCAGAATTATGTGCTGTTTT+TGG | + | chr3.2:65354505-65354524 | None:intergenic | 35.0% |
| !!! | CGTGTTTTGGAGGTTTTTAT+AGG | + | chr3.2:65355220-65355239 | None:intergenic | 35.0% |
| !!! | TTGCGTGTCCTATTTTTTTC+GGG | - | chr3.2:65355169-65355188 | MS.gene99890:intron | 35.0% |
| AAGACACCCATTGTCATCTT+TGG | + | chr3.2:65352243-65352262 | None:intergenic | 40.0% | |
| ACACGCAAACTCTCAAACAT+TGG | - | chr3.2:65354533-65354552 | MS.gene99890:intron | 40.0% | |
| ACTATATGGTCCTCTCTACA+CGG | - | chr3.2:65354866-65354885 | MS.gene99890:intron | 40.0% | |
| ATAGACCCACTGCAATAATC+AGG | + | chr3.2:65356073-65356092 | None:intergenic | 40.0% | |
| ATTCATTCCCATGTTGAGAC+TGG | + | chr3.2:65351703-65351722 | None:intergenic | 40.0% | |
| CAATGTTTCCAAGGAGTGAA+TGG | - | chr3.2:65352074-65352093 | MS.gene99890:intron | 40.0% | |
| CACATAATACGCTATTCCTG+AGG | + | chr3.2:65355697-65355716 | None:intergenic | 40.0% | |
| CACGCAAACTCTCAAACATT+GGG | - | chr3.2:65354534-65354553 | MS.gene99890:intron | 40.0% | |
| CACGCAATAAATCAATAGGG+TGG | + | chr3.2:65355156-65355175 | None:intergenic | 40.0% | |
| CGAAGCATAGCAAAAGTGAT+TGG | - | chr3.2:65354406-65354425 | MS.gene99890:intron | 40.0% | |
| CTTGGGGATGCAATATACAT+CGG | - | chr3.2:65354143-65354162 | MS.gene99890:intron | 40.0% | |
| GAAAATTACGGCTAGCACAA+AGG | + | chr3.2:65354211-65354230 | None:intergenic | 40.0% | |
| GAAACGGATGGAGTATAATG+TGG | + | chr3.2:65353670-65353689 | None:intergenic | 40.0% | |
| GAACACAAGTGATGATCACT+AGG | + | chr3.2:65355883-65355902 | None:intergenic | 40.0% | |
| GACATTAGTAACCTTTGCAG+GGG | - | chr3.2:65354429-65354448 | MS.gene99890:intron | 40.0% | |
| GGAATAGCGTATTATGTGCA+AGG | - | chr3.2:65355699-65355718 | MS.gene99890:intron | 40.0% | |
| GGACATTAGTAACCTTTGCA+GGG | - | chr3.2:65354428-65354447 | MS.gene99890:intron | 40.0% | |
| GGTTGGGACTTTAGACTATA+TGG | - | chr3.2:65354852-65354871 | MS.gene99890:intron | 40.0% | |
| GTTGGGATACTCTACATGTA+TGG | - | chr3.2:65351881-65351900 | MS.gene99890:intron | 40.0% | |
| TAACGGTGGCACTTCAATTT+GGG | - | chr3.2:65351649-65351668 | MS.gene99890:CDS | 40.0% | |
| TAGACCCACTGCAATAATCA+GGG | + | chr3.2:65356072-65356091 | None:intergenic | 40.0% | |
| TCAAATAGGATGACCTCCAA+CGG | - | chr3.2:65355040-65355059 | MS.gene99890:intron | 40.0% | |
| TGCGCGAGAAACTTATAAAG+TGG | - | chr3.2:65355274-65355293 | MS.gene99890:intron | 40.0% | |
| TTAACGGTGGCACTTCAATT+TGG | - | chr3.2:65351648-65351667 | MS.gene99890:CDS | 40.0% | |
| TTAGAAGTTACCTTCCCAAG+TGG | + | chr3.2:65355827-65355846 | None:intergenic | 40.0% | |
| TTTAGGCCAGTGATAGATCA+AGG | - | chr3.2:65354111-65354130 | MS.gene99890:intron | 40.0% | |
| TTTGAGTGTGTTCATCCTCA+TGG | - | chr3.2:65353506-65353525 | MS.gene99890:intron | 40.0% | |
| ! | AGGAGCATACATATTCTCCA+TGG | - | chr3.2:65351677-65351696 | MS.gene99890:CDS | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr3.2:65353787-65353806 | None:intergenic | 40.0% |
| ! | TCAGTTTGCTTCATTGCAAC+TGG | + | chr3.2:65356158-65356177 | None:intergenic | 40.0% |
| ! | TGTAGAGTATCCCAACTACA+TGG | + | chr3.2:65351877-65351896 | None:intergenic | 40.0% |
| ! | TTGTGCTAGCCGTAATTTTC+AGG | - | chr3.2:65354211-65354230 | MS.gene99890:intron | 40.0% |
| !! | AAGCGACGCTCATTTTGAAA+CGG | + | chr3.2:65353686-65353705 | None:intergenic | 40.0% |
| !! | CTTTCTAATGATGGGTTGTG+TGG | - | chr3.2:65354570-65354589 | MS.gene99890:intron | 40.0% |
| !! | GATAATGGCGCTTGCATTTT+TGG | - | chr3.2:65352269-65352288 | MS.gene99890:intron | 40.0% |
| !! | GTTGATAGTGACATTTCTGC+TGG | + | chr3.2:65354747-65354766 | None:intergenic | 40.0% |
| !! | TAATAGAGTACCGTGTAGAG+AGG | + | chr3.2:65354879-65354898 | None:intergenic | 40.0% |
| !!! | AGTTTTAAGTCAACACCACG+AGG | + | chr3.2:65353486-65353505 | None:intergenic | 40.0% |
| !!! | CGACACTCATTTTAAAACGG+AGG | - | chr3.2:65353924-65353943 | MS.gene99890:intron | 40.0% |
| AAATAGGATGACCTCCAACG+GGG | - | chr3.2:65355042-65355061 | MS.gene99890:intron | 45.0% | |
| AATGGTGAGAATCCCGACAA+CGG | - | chr3.2:65352092-65352111 | MS.gene99890:intron | 45.0% | |
| ACTCTCAAACATTGGGTCTC+AGG | - | chr3.2:65354541-65354560 | MS.gene99890:intron | 45.0% | |
| AGCGTATTATGTGCAAGGGT+TGG | - | chr3.2:65355704-65355723 | MS.gene99890:intron | 45.0% | |
| AGGTTTAAACCCACTTGGGT+TGG | - | chr3.2:65353460-65353479 | MS.gene99890:intron | 45.0% | |
| AGTGGAGTTGCTCTGCAAAA+AGG | + | chr3.2:65355809-65355828 | None:intergenic | 45.0% | |
| CAAATAGGATGACCTCCAAC+GGG | - | chr3.2:65355041-65355060 | MS.gene99890:intron | 45.0% | |
| GAGTTGCTCTGCAAAAAGGA+AGG | + | chr3.2:65355805-65355824 | None:intergenic | 45.0% | |
| GATTCTCACCATTCACTCCT+TGG | + | chr3.2:65352085-65352104 | None:intergenic | 45.0% | |
| GCTAGCACAAAGGTAACAGA+AGG | + | chr3.2:65354201-65354220 | None:intergenic | 45.0% | |
| GGGACATTAGTAACCTTTGC+AGG | - | chr3.2:65354427-65354446 | MS.gene99890:intron | 45.0% | |
| GGGTCTATATTCTGTGGTGT+GGG | - | chr3.2:65356085-65356104 | MS.gene99890:CDS | 45.0% | |
| GGTCTATATTCTGTGGTGTG+GGG | - | chr3.2:65356086-65356105 | MS.gene99890:CDS | 45.0% | |
| TGACAATGGGTGTCTTTGTG+CGG | - | chr3.2:65352247-65352266 | MS.gene99890:intron | 45.0% | |
| TGCAGTGGGTCTATATTCTG+TGG | - | chr3.2:65356079-65356098 | MS.gene99890:CDS | 45.0% | |
| TGCTTCATTGCAACTGGTGA+TGG | + | chr3.2:65356152-65356171 | None:intergenic | 45.0% | |
| TGGGTCTATATTCTGTGGTG+TGG | - | chr3.2:65356084-65356103 | MS.gene99890:CDS | 45.0% | |
| TTGAGGTTTGGGCTATTGGT+TGG | - | chr3.2:65354835-65354854 | MS.gene99890:intron | 45.0% | |
| TTTGCAGAGCAACTCCACTT+GGG | - | chr3.2:65355810-65355829 | MS.gene99890:intron | 45.0% | |
| ! | AGGGCATTATGTGTTAACGG+TGG | - | chr3.2:65351635-65351654 | MS.gene99890:CDS | 45.0% |
| ! | GCACTTCAATTTGGGTTTGC+AGG | - | chr3.2:65351657-65351676 | MS.gene99890:CDS | 45.0% |
| ! | GGCAGGGCATTATGTGTTAA+CGG | - | chr3.2:65351632-65351651 | MS.gene99890:CDS | 45.0% |
| ! | TGAGGTTTGGGCTATTGGTT+GGG | - | chr3.2:65354836-65354855 | MS.gene99890:intron | 45.0% |
| ! | TTTTGCAGAGCAACTCCACT+TGG | - | chr3.2:65355809-65355828 | MS.gene99890:intron | 45.0% |
| !! | TAATGATGGGTTGTGTGGCT+TGG | - | chr3.2:65354575-65354594 | MS.gene99890:intron | 45.0% |
| !! | TCACTCTGGTCTTGAGGTTT+GGG | - | chr3.2:65354824-65354843 | MS.gene99890:intron | 45.0% |
| !! | TCTTGGTAACGTGTGTCCTA+AGG | - | chr3.2:65354275-65354294 | MS.gene99890:intron | 45.0% |
| !! | TTCATTGCAACTGGTGATGG+TGG | + | chr3.2:65356149-65356168 | None:intergenic | 45.0% |
| !!! | GACGCTCATTTTGAAACGGA+TGG | + | chr3.2:65353682-65353701 | None:intergenic | 45.0% |
| !! | AATATTACATTATATATATA+TGG | - | chr3.2:65352807-65352826 | MS.gene99890:intron | 5.0% |
| AAATGAGTGCAAAGGGGGCA+AGG | + | chr3.2:65351770-65351789 | None:intergenic | 50.0% | |
| AATGAGTGCAAAGGGGGCAA+GGG | + | chr3.2:65351769-65351788 | None:intergenic | 50.0% | |
| AGATGGTCCTGTCACAGACA+CGG | - | chr3.2:65355944-65355963 | MS.gene99890:intron | 50.0% | |
| ATGGTGAGAATCCCGACAAC+GGG | - | chr3.2:65352093-65352112 | MS.gene99890:intron | 50.0% | |
| ATTTGCAATAGGCTCCCCGT+TGG | + | chr3.2:65355059-65355078 | None:intergenic | 50.0% | |
| CATCATCAATGCCCCTGCAA+AGG | + | chr3.2:65354443-65354462 | None:intergenic | 50.0% | |
| GAGGGACTCAATTAGACGCT+TGG | + | chr3.2:65353183-65353202 | None:intergenic | 50.0% | |
| GGAGCCCTGATTATTGCAGT+GGG | - | chr3.2:65356065-65356084 | MS.gene99890:CDS | 50.0% | |
| GGGTGTCTTTGTGCGGATAA+TGG | - | chr3.2:65352254-65352273 | MS.gene99890:intron | 50.0% | |
| GGTCTTGAGGTTTGGGCTAT+TGG | - | chr3.2:65354831-65354850 | MS.gene99890:intron | 50.0% | |
| TCAATGTCCGTGTCTGTGAC+AGG | + | chr3.2:65355954-65355973 | None:intergenic | 50.0% | |
| TCCATGGCCAGTCTCAACAT+GGG | - | chr3.2:65351693-65351712 | MS.gene99890:CDS | 50.0% | |
| TGCCATGCAAACTAGTGTGG+TGG | - | chr3.2:65354785-65354804 | MS.gene99890:intron | 50.0% | |
| TGGAGCCCTGATTATTGCAG+TGG | - | chr3.2:65356064-65356083 | MS.gene99890:CDS | 50.0% | |
| TTCATTGCTGAGCGTCACTC+TGG | - | chr3.2:65354810-65354829 | MS.gene99890:intron | 50.0% | |
| ! | TGCCACCACACTAGTTTGCA+TGG | + | chr3.2:65354790-65354809 | None:intergenic | 50.0% |
| !! | GGGTTGGTATTTCAAGCCAG+AGG | - | chr3.2:65355720-65355739 | MS.gene99890:intron | 50.0% |
| !! | GTCACTCTGGTCTTGAGGTT+TGG | - | chr3.2:65354823-65354842 | MS.gene99890:intron | 50.0% |
| !! | TGGTGCCATGCAAACTAGTG+TGG | - | chr3.2:65354782-65354801 | MS.gene99890:intron | 50.0% |
| CAGAGCAACTCCACTTGGGA+AGG | - | chr3.2:65355814-65355833 | MS.gene99890:intron | 55.0% | |
| CTCCATGGCCAGTCTCAACA+TGG | - | chr3.2:65351692-65351711 | MS.gene99890:CDS | 55.0% | |
| ! | TCCCATGTTGAGACTGGCCA+TGG | + | chr3.2:65351697-65351716 | None:intergenic | 55.0% |
| !! | GCAACTGGTGATGGTGGCAT+AGG | + | chr3.2:65356143-65356162 | None:intergenic | 55.0% |
| !! | TGAGCGTCACTCTGGTCTTG+AGG | - | chr3.2:65354818-65354837 | MS.gene99890:intron | 55.0% |
| ACCACGAGGCCAACCCAAGT+GGG | + | chr3.2:65353472-65353491 | None:intergenic | 60.0% | |
| TGCAATAGGCTCCCCGTTGG+AGG | + | chr3.2:65355056-65355075 | None:intergenic | 60.0% | |
| CACCACGAGGCCAACCCAAG+TGG | + | chr3.2:65353473-65353492 | None:intergenic | 65.0% | |
| !! | ACCCACTTGGGTTGGCCTCG+TGG | - | chr3.2:65353468-65353487 | MS.gene99890:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 65351624 | 65356211 | 65351624 | ID=MS.gene99890 |
| chr3.2 | mRNA | 65351624 | 65356211 | 65351624 | ID=MS.gene99890.t1;Parent=MS.gene99890 |
| chr3.2 | exon | 65356039 | 65356211 | 65356039 | ID=MS.gene99890.t1.exon1;Parent=MS.gene99890.t1 |
| chr3.2 | CDS | 65356039 | 65356211 | 65356039 | ID=cds.MS.gene99890.t1;Parent=MS.gene99890.t1 |
| chr3.2 | exon | 65355543 | 65355605 | 65355543 | ID=MS.gene99890.t1.exon2;Parent=MS.gene99890.t1 |
| chr3.2 | CDS | 65355543 | 65355605 | 65355543 | ID=cds.MS.gene99890.t1;Parent=MS.gene99890.t1 |
| chr3.2 | exon | 65353603 | 65353719 | 65353603 | ID=MS.gene99890.t1.exon3;Parent=MS.gene99890.t1 |
| chr3.2 | CDS | 65353603 | 65353719 | 65353603 | ID=cds.MS.gene99890.t1;Parent=MS.gene99890.t1 |
| chr3.2 | exon | 65353217 | 65353457 | 65353217 | ID=MS.gene99890.t1.exon4;Parent=MS.gene99890.t1 |
| chr3.2 | CDS | 65353217 | 65353457 | 65353217 | ID=cds.MS.gene99890.t1;Parent=MS.gene99890.t1 |
| chr3.2 | exon | 65352948 | 65353112 | 65352948 | ID=MS.gene99890.t1.exon5;Parent=MS.gene99890.t1 |
| chr3.2 | CDS | 65352948 | 65353112 | 65352948 | ID=cds.MS.gene99890.t1;Parent=MS.gene99890.t1 |
| chr3.2 | exon | 65352000 | 65352018 | 65352000 | ID=MS.gene99890.t1.exon6;Parent=MS.gene99890.t1 |
| chr3.2 | CDS | 65352000 | 65352018 | 65352000 | ID=cds.MS.gene99890.t1;Parent=MS.gene99890.t1 |
| chr3.2 | exon | 65351624 | 65351751 | 65351624 | ID=MS.gene99890.t1.exon7;Parent=MS.gene99890.t1 |
| chr3.2 | CDS | 65351624 | 65351751 | 65351624 | ID=cds.MS.gene99890.t1;Parent=MS.gene99890.t1 |
| Gene Sequence |
| Protein sequence |
