AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080047927.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080047927.01.T01 MTR_1g007590 80.632 253 43 2 70 317 131 382 3.86e-138 411
MsG0080047927.01.T01 MTR_1g007590 80.632 253 43 2 70 317 226 477 3.67e-137 412
MsG0080047927.01.T01 MTR_1g007450 52.098 286 101 1 348 597 91 376 1.54e-84 271
MsG0080047927.01.T01 MTR_3g092100 47.273 330 123 7 1 281 65 392 3.04e-84 274
MsG0080047927.01.T01 MTR_1g007430 48.534 307 103 3 305 570 27 319 4.90e-75 243
MsG0080047927.01.T01 MTR_0129s0070 48.592 284 105 4 348 595 96 374 1.56e-73 241
MsG0080047927.01.T01 MTR_0129s0120 48.592 284 105 4 348 595 96 374 4.81e-72 237
MsG0080047927.01.T01 MTR_8g012090 50.593 253 104 8 348 586 89 334 4.12e-64 214
MsG0080047927.01.T01 MTR_8g063440 42.807 285 113 8 348 596 92 362 1.60e-60 206
MsG0080047927.01.T01 MTR_7g069550 43.253 289 109 9 348 592 98 375 1.94e-59 204
MsG0080047927.01.T01 MTR_5g097350 43.478 276 114 8 348 595 105 366 5.25e-59 202
MsG0080047927.01.T01 MTR_4g028510 43.448 290 121 8 348 597 96 382 1.77e-58 203
MsG0080047927.01.T01 MTR_5g097330 43.103 290 116 8 348 595 98 380 4.60e-58 200
MsG0080047927.01.T01 MTR_4g028660 41.980 293 129 7 348 602 95 384 2.56e-57 198
MsG0080047927.01.T01 MTR_4g027450 41.980 293 129 7 348 602 95 384 2.56e-57 198
MsG0080047927.01.T01 MTR_2g022000 43.197 294 119 7 348 595 104 395 4.31e-57 198
MsG0080047927.01.T01 MTR_2g021800 42.373 295 120 8 348 595 105 396 4.07e-56 195
MsG0080047927.01.T01 MTR_4g028680 41.667 288 128 7 348 597 95 380 4.90e-56 194
MsG0080047927.01.T01 MTR_4g102410 41.404 285 130 4 348 595 144 428 6.33e-56 196
MsG0080047927.01.T01 MTR_4g130330 41.958 286 125 5 348 593 82 366 6.43e-56 194
MsG0080047927.01.T01 MTR_6g078010 43.590 273 126 8 348 595 44 313 1.02e-55 192
MsG0080047927.01.T01 MTR_4g007940 34.627 335 162 7 313 600 1 325 2.81e-55 191
MsG0080047927.01.T01 MTR_3g011120 41.071 280 119 9 348 595 93 358 4.97e-55 191
MsG0080047927.01.T01 MTR_5g043605 41.516 277 130 11 344 595 49 318 3.88e-54 189
MsG0080047927.01.T01 MTR_0129s0050 41.333 300 119 5 348 595 92 386 1.92e-53 188
MsG0080047927.01.T01 MTR_4g028750 39.796 294 133 8 348 602 95 383 2.75e-53 187
MsG0080047927.01.T01 MTR_2g021950 41.135 282 127 7 350 595 99 377 4.04e-53 186
MsG0080047927.01.T01 MTR_7g079640 40.179 336 158 12 288 598 40 357 5.95e-53 186
MsG0080047927.01.T01 MTR_6g090180 41.000 300 129 9 348 602 127 423 8.13e-53 187
MsG0080047927.01.T01 MTR_8g464770 40.283 283 117 8 348 595 93 358 1.64e-52 184
MsG0080047927.01.T01 MTR_2g021770 39.394 297 122 9 348 595 98 385 3.51e-52 184
MsG0080047927.01.T01 MTR_6g080680 41.135 282 125 8 348 595 99 373 8.88e-52 183
MsG0080047927.01.T01 MTR_0054s0100 40.339 295 124 8 348 595 97 386 1.36e-51 183
MsG0080047927.01.T01 MTR_6g079770 39.404 302 126 6 348 595 97 395 1.54e-51 183
MsG0080047927.01.T01 MTR_5g086590 43.668 229 92 4 388 589 13 231 3.37e-51 176
MsG0080047927.01.T01 MTR_2g066150 37.299 311 172 8 303 599 41 342 5.46e-51 180
MsG0080047927.01.T01 MTR_6g086825 39.731 297 121 8 348 595 151 438 5.61e-51 182
MsG0080047927.01.T01 MTR_0134s0060 37.464 347 157 10 303 595 50 390 6.83e-51 181
MsG0080047927.01.T01 MTR_5g097220 38.762 307 119 9 348 595 88 384 8.05e-51 181
MsG0080047927.01.T01 MTR_8g467670 39.068 279 125 8 348 595 93 357 8.13e-51 180
MsG0080047927.01.T01 MTR_6g079810 40.066 302 124 8 348 597 147 443 1.88e-50 181
MsG0080047927.01.T01 MTR_0054s0090 40.339 295 122 9 348 595 97 384 1.03e-49 177
MsG0080047927.01.T01 MTR_7g111700 44.318 264 129 8 348 595 83 344 1.10e-49 176
MsG0080047927.01.T01 MTR_8g036970 42.562 242 108 6 348 586 79 292 1.15e-49 177
MsG0080047927.01.T01 MTR_5g074800 40.550 291 116 8 348 592 41 320 1.24e-49 176
MsG0080047927.01.T01 MTR_4g014370 36.825 315 139 8 334 595 80 387 2.06e-49 177
MsG0080047927.01.T01 MTR_5g092850 38.284 303 119 11 348 596 91 379 2.67e-49 177
MsG0080047927.01.T01 MTR_6g087620 42.205 263 134 8 348 596 9 267 3.78e-49 172
MsG0080047927.01.T01 MTR_5g068490 40.377 265 122 9 350 595 9 256 1.58e-48 171
MsG0080047927.01.T01 MTR_4g117550 37.413 286 108 7 348 595 99 351 4.84e-48 172
MsG0080047927.01.T01 MTR_5g037680 41.489 282 119 11 348 594 93 363 5.57e-48 174
MsG0080047927.01.T01 MTR_2g066170 35.385 325 160 9 303 595 58 364 1.09e-47 172
MsG0080047927.01.T01 MTR_7g023800 42.085 259 128 7 348 595 42 289 1.59e-47 169
MsG0080047927.01.T01 MTR_2g034700 41.155 277 119 9 348 595 93 354 3.34e-47 170
MsG0080047927.01.T01 MTR_6g478230 40.636 283 129 9 348 595 107 385 7.06e-47 170
MsG0080047927.01.T01 MTR_7g017040 39.649 285 123 7 348 590 94 371 8.36e-47 169
MsG0080047927.01.T01 MTR_5g072060 43.866 269 121 9 348 592 85 347 2.50e-46 173
MsG0080047927.01.T01 MTR_7g017130 38.542 288 134 7 348 599 99 379 4.47e-46 167
MsG0080047927.01.T01 MTR_2g038680 38.158 304 118 10 348 595 99 388 4.85e-46 168
MsG0080047927.01.T01 MTR_2g064950 39.867 301 113 11 348 598 90 372 6.76e-46 167
MsG0080047927.01.T01 MTR_6g461660 40.064 312 123 10 331 596 86 379 7.92e-46 167
MsG0080047927.01.T01 MTR_5g059430 38.384 297 130 10 339 589 108 397 9.99e-46 167
MsG0080047927.01.T01 MTR_7g017170 38.869 283 130 7 348 594 99 374 1.55e-45 166
MsG0080047927.01.T01 MTR_6g079790 37.931 290 130 8 352 595 2 287 8.27e-45 162
MsG0080047927.01.T01 MTR_5g069390 37.329 292 139 7 339 590 103 390 1.15e-44 166
MsG0080047927.01.T01 MTR_8g039500 39.273 275 118 7 348 586 85 346 2.42e-44 161
MsG0080047927.01.T01 MTR_0831s0010 37.324 284 126 9 348 595 132 399 3.03e-44 163
MsG0080047927.01.T01 MTR_1g007410 38.408 289 123 8 348 592 104 381 3.96e-44 162
MsG0080047927.01.T01 MTR_5g096910 37.857 280 124 9 348 589 97 364 4.59e-44 162
MsG0080047927.01.T01 MTR_4g055820 39.350 277 105 9 348 573 95 359 4.88e-44 161
MsG0080047927.01.T01 MTR_2g104340 35.465 344 164 10 305 599 45 379 6.19e-44 162
MsG0080047927.01.T01 MTR_5g023970 52.439 164 74 3 432 595 14 173 1.31e-43 154
MsG0080047927.01.T01 MTR_5g096630 36.301 292 141 5 349 595 101 392 2.82e-43 160
MsG0080047927.01.T01 MTR_6g090250 36.392 316 130 10 348 595 90 402 1.14e-42 159
MsG0080047927.01.T01 MTR_2g065840 37.153 288 135 9 349 599 91 369 1.80e-42 157
MsG0080047927.01.T01 MTR_8g064890 34.868 304 151 6 329 596 75 367 1.94e-42 157
MsG0080047927.01.T01 MTR_5g097850 37.551 245 116 7 361 594 5 223 3.95e-42 152
MsG0080047927.01.T01 MTR_2g066200 36.364 286 142 8 348 599 91 370 4.37e-42 156
MsG0080047927.01.T01 MTR_8g041270 36.304 303 136 8 348 599 93 389 5.15e-42 157
MsG0080047927.01.T01 MTR_5g022850 38.721 297 118 10 349 595 50 332 7.84e-42 155
MsG0080047927.01.T01 MTR_5g091140 42.045 264 128 10 348 590 130 389 1.06e-41 156
MsG0080047927.01.T01 MTR_5g092860 34.628 309 112 10 348 597 76 353 3.85e-41 153
MsG0080047927.01.T01 MTR_4g014370 37.500 264 124 6 334 595 91 315 4.46e-41 152
MsG0080047927.01.T01 MTR_5g074850 37.954 303 123 14 348 596 112 403 4.67e-41 160
MsG0080047927.01.T01 MTR_2g021920 37.849 251 103 5 396 595 5 253 5.73e-41 150
MsG0080047927.01.T01 MTR_2g065860 35.106 282 142 8 349 595 91 366 8.48e-41 153
MsG0080047927.01.T01 MTR_8g064790 40.408 245 118 6 348 590 92 310 9.01e-41 151
MsG0080047927.01.T01 MTR_1g053510 34.641 306 125 9 348 595 96 384 9.91e-41 153
MsG0080047927.01.T01 MTR_2g104280 33.708 356 158 13 303 599 52 388 1.03e-40 153
MsG0080047927.01.T01 MTR_5g075370 36.964 303 125 13 348 594 85 377 1.61e-40 158
MsG0080047927.01.T01 MTR_8g063350 33.779 299 148 11 331 590 31 318 2.30e-40 150
MsG0080047927.01.T01 MTR_1g050312 37.367 281 112 11 348 595 24 273 3.04e-40 148
MsG0080047927.01.T01 MTR_8g013000 35.045 331 152 11 288 572 37 350 2.82e-39 149
MsG0080047927.01.T01 MTR_6g090260 48.171 164 80 3 432 593 78 238 4.26e-39 144
MsG0080047927.01.T01 MTR_5g064700 36.688 308 133 11 348 595 43 348 5.01e-39 147
MsG0080047927.01.T01 MTR_5g024260 37.500 296 130 15 348 597 100 386 2.19e-38 147
MsG0080047927.01.T01 MTR_5g097680 36.943 314 128 13 348 595 98 407 2.49e-37 144
MsG0080047927.01.T01 MTR_8g046310 36.525 282 125 12 348 595 95 356 5.26e-37 142
MsG0080047927.01.T01 MTR_3g018750 46.591 176 73 5 432 595 51 217 2.16e-36 136
MsG0080047927.01.T01 MTR_1g098180 36.975 238 107 7 388 595 120 344 1.67e-35 137
MsG0080047927.01.T01 MTR_8g063330 34.221 263 124 6 348 572 97 348 2.17e-35 139
MsG0080047927.01.T01 MTR_6g004450 42.105 209 71 6 421 592 49 244 6.88e-35 133
MsG0080047927.01.T01 MTR_7g016930 40.598 234 99 6 348 548 78 304 8.06e-35 135
MsG0080047927.01.T01 MTR_8g033140 33.003 303 141 9 348 595 100 395 5.48e-34 134
MsG0080047927.01.T01 MTR_8g063370 34.191 272 132 11 354 590 105 364 1.07e-33 133
MsG0080047927.01.T01 MTR_8g063310 33.803 284 137 12 349 592 100 372 7.42e-32 128
MsG0080047927.01.T01 MTR_7g019250 35.714 238 90 5 402 600 206 419 1.27e-31 128
MsG0080047927.01.T01 MTR_6g009350 40.415 193 75 5 422 580 9 195 1.38e-31 121
MsG0080047927.01.T01 MTR_8g033110 33.442 308 127 12 353 595 99 393 2.21e-31 127
MsG0080047927.01.T01 MTR_8g033090 33.117 308 125 11 353 595 99 390 2.63e-31 126
MsG0080047927.01.T01 MTR_5g098950 37.850 214 70 3 390 572 90 271 2.87e-31 123
MsG0080047927.01.T01 MTR_8g033000 42.614 176 82 5 432 598 179 344 6.36e-30 121
MsG0080047927.01.T01 MTR_4g016000 36.232 207 80 8 393 566 2 189 2.60e-29 115
MsG0080047927.01.T01 MTR_5g086780 36.232 207 91 1 387 593 63 228 4.41e-29 115
MsG0080047927.01.T01 MTR_5g076490 34.122 296 126 9 348 595 39 313 5.04e-29 118
MsG0080047927.01.T01 MTR_5g096900 40.196 204 88 6 362 540 119 313 1.52e-28 116
MsG0080047927.01.T01 MTR_8g046220 31.410 312 135 10 348 599 96 388 7.60e-28 116
MsG0080047927.01.T01 MTR_7g104710 36.889 225 127 7 319 532 66 286 2.47e-27 113
MsG0080047927.01.T01 MTR_1g050308 29.893 281 103 8 348 597 113 330 7.05e-27 112
MsG0080047927.01.T01 MTR_7g017120 41.279 172 90 4 432 602 84 245 1.71e-26 109
MsG0080047927.01.T01 MTR_5g096920 48.800 125 58 3 463 586 2 121 2.57e-26 105
MsG0080047927.01.T01 MTR_6g079730 49.558 113 57 0 481 593 14 126 2.59e-26 105
MsG0080047927.01.T01 MTR_8g032980 40.884 181 84 6 432 598 231 402 3.12e-26 112
MsG0080047927.01.T01 MTR_7g017150 41.279 172 90 4 432 602 85 246 3.35e-26 108
MsG0080047927.01.T01 MTR_5g066420 45.070 142 72 3 463 599 2 142 8.75e-26 103
MsG0080047927.01.T01 MTR_3g030620 43.357 143 76 2 458 596 19 160 2.09e-25 103
MsG0080047927.01.T01 MTR_8g018110 31.333 300 126 13 353 595 99 375 2.98e-25 108
MsG0080047927.01.T01 MTR_5g091150 37.089 213 95 9 352 539 2 200 7.81e-25 102
MsG0080047927.01.T01 MTR_8g046200 40.341 176 91 7 423 595 236 400 9.19e-25 107
MsG0080047927.01.T01 MTR_5g097540 33.482 224 106 6 349 572 50 230 1.55e-24 104
MsG0080047927.01.T01 MTR_8g035690 40.805 174 89 5 425 596 121 282 6.01e-24 102
MsG0080047927.01.T01 MTR_7g101200 35.468 203 101 8 388 573 38 227 3.01e-21 93.6
MsG0080047927.01.T01 MTR_5g097660 49.515 103 51 1 501 602 3 105 8.81e-21 88.6
MsG0080047927.01.T01 MTR_5g037190 41.026 156 70 8 350 487 99 250 4.09e-20 90.5
MsG0080047927.01.T01 MTR_5g036250 60.000 70 28 0 526 595 21 90 1.10e-19 87.4
MsG0080047927.01.T01 MTR_5g096050 44.554 101 42 1 455 555 18 104 2.57e-19 84.3
MsG0080047927.01.T01 MTR_4g094400 47.619 105 42 2 459 550 7 111 3.46e-19 84.3
MsG0080047927.01.T01 MTR_8g073570 50.000 86 39 3 348 432 88 170 1.37e-17 81.3
MsG0080047927.01.T01 MTR_2g022020 39.394 99 60 0 497 595 2 100 1.43e-17 79.3
MsG0080047927.01.T01 MTR_1g068835 26.277 274 157 11 359 598 79 341 5.31e-17 83.6
MsG0080047927.01.T01 MTR_1g050305 55.263 76 29 2 520 590 23 98 7.95e-17 78.2
MsG0080047927.01.T01 MTR_4g133170 26.415 318 180 16 317 598 42 341 1.74e-16 82.0
MsG0080047927.01.T01 MTR_5g097820 33.714 175 70 9 348 485 104 269 2.39e-16 80.1
MsG0080047927.01.T01 MTR_3g047540 53.030 66 25 2 432 497 9 68 1.51e-15 72.8
MsG0080047927.01.T01 MTR_4g116330 27.869 244 137 10 363 583 114 341 2.75e-14 75.5
MsG0080047927.01.T01 MTR_1g076810 38.095 147 57 6 348 463 98 241 1.04e-13 74.7
MsG0080047927.01.T01 MTR_2g021860 43.023 86 46 3 351 434 14 98 2.68e-13 67.8
MsG0080047927.01.T01 MTR_1g068875 25.714 280 158 13 346 589 68 333 4.51e-13 71.6
MsG0080047927.01.T01 MTR_8g101580 26.190 252 129 12 374 589 142 372 4.76e-13 71.6
MsG0080047927.01.T01 MTR_3g097190 52.727 55 26 0 537 591 28 82 1.26e-12 67.0
MsG0080047927.01.T01 MTR_6g048120 24.841 314 163 16 279 550 46 328 1.97e-12 69.7
MsG0080047927.01.T01 MTR_3g013740 26.054 261 141 11 375 598 152 397 2.80e-12 69.3
MsG0080047927.01.T01 MTR_3g007410 27.103 214 113 8 368 553 141 339 3.19e-12 69.3
MsG0080047927.01.T01 MTR_4g021785 28.395 243 140 8 360 583 93 320 3.67e-12 68.6
MsG0080047927.01.T01 MTR_3g007360 27.103 214 113 8 368 553 141 339 3.88e-12 68.9
MsG0080047927.01.T01 MTR_1g097560 28.400 250 136 13 368 594 128 357 6.26e-12 68.2
MsG0080047927.01.T01 MTR_2g026010 26.441 295 154 14 350 592 60 343 6.58e-12 68.2
MsG0080047927.01.T01 MTR_2g024100 24.409 254 144 11 358 568 83 331 9.70e-12 67.8
MsG0080047927.01.T01 MTR_2g099185 27.815 151 84 2 229 366 391 529 1.64e-11 67.8
MsG0080047927.01.T01 MTR_2g021150 26.644 289 158 14 330 583 70 339 1.82e-11 66.6
MsG0080047927.01.T01 MTR_8g040935 30.380 158 99 5 432 583 17 169 1.87e-11 64.3
MsG0080047927.01.T01 MTR_1g068860 25.461 271 149 13 359 589 79 336 1.99e-11 66.6
MsG0080047927.01.T01 MTR_2g024110 28.311 219 115 12 366 553 87 294 2.29e-11 66.2
MsG0080047927.01.T01 MTR_4g023130 29.167 216 118 7 389 583 77 278 3.34e-11 65.1
MsG0080047927.01.T01 MTR_4g115090 54.167 48 22 0 231 278 456 503 5.26e-11 65.9
MsG0080047927.01.T01 MTR_4g109270 27.309 249 138 11 362 583 95 327 6.38e-11 64.7
MsG0080047927.01.T01 MTR_2g029990 26.000 250 144 11 353 580 132 362 7.07e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080047927.01.T01 AT5G53570 42.444 311 139 6 1 281 90 390 1.84e-67 229
MsG0080047927.01.T01 AT5G53570 42.444 311 139 6 1 281 117 417 4.15e-67 229
MsG0080047927.01.T01 AT5G41940 40.173 346 165 12 1 309 83 423 1.29e-58 206
MsG0080047927.01.T01 AT5G24390 39.506 324 142 7 1 281 57 369 5.87e-57 201
MsG0080047927.01.T01 AT3G49350 38.941 321 147 9 9 285 71 386 2.41e-56 199
MsG0080047927.01.T01 AT5G52580 31.818 110 62 2 178 278 423 528 2.59e-11 67.0
MsG0080047927.01.T01 AT5G52580 31.818 110 62 2 178 278 412 517 2.65e-11 67.0
MsG0080047927.01.T01 AT5G52580 31.818 110 62 2 178 278 406 511 2.66e-11 67.0

Find 134 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTTGGTTCTGGAATTAA+TGG 0.146238 contig149end:-9566 MsG0080047927.01.T01:CDS
CTGAGGATCACGAGGCTTTC+TGG 0.173484 contig149end:-11956 MsG0080047927.01.T01:CDS
AATTACTATCTGAGAATAAA+AGG 0.207981 contig149end:+8802 MsG0080047927.01.T01:intergenic
AGATATTGATAAGGTATATT+TGG 0.239767 contig149end:-9172 MsG0080047927.01.T01:CDS
ACTCCATTGCGCACTCTTTC+AGG 0.251043 contig149end:+13401 MsG0080047927.01.T01:intergenic
GCACTATATGACTCTGAAAT+TGG 0.252631 contig149end:-12029 MsG0080047927.01.T01:CDS
GCTCTTGATATTAATATTCT+TGG 0.257367 contig149end:-9581 MsG0080047927.01.T01:CDS
AATTCAAGGGCTTGCATTAC+AGG 0.270136 contig149end:-8830 MsG0080047927.01.T01:CDS
TACCTATCTATTACATTAGA+TGG 0.300250 contig149end:+9440 MsG0080047927.01.T01:intergenic
ATTTGTCTTGGGCTTCCTAT+TGG 0.302252 contig149end:-8928 MsG0080047927.01.T01:CDS
ACAAAGATATATAAATAATC+TGG 0.303584 contig149end:+12945 MsG0080047927.01.T01:intergenic
GGAAGTCTCATCTCCCTTAC+AGG 0.307078 contig149end:-12288 MsG0080047927.01.T01:CDS
TACGTCCACGCCTTCATATA+TGG 0.307569 contig149end:-9115 MsG0080047927.01.T01:CDS
ACGTTGACTTCCTCAATAGA+TGG 0.314765 contig149end:+9491 MsG0080047927.01.T01:intergenic
GATATTAATATTCTTGGTTC+TGG 0.322777 contig149end:-9575 MsG0080047927.01.T01:CDS
TTGAGCAAGTGTACACTAAT+GGG 0.323162 contig149end:-9224 MsG0080047927.01.T01:CDS
CTCATGGAAGAAACTTGATT+TGG 0.337996 contig149end:-9283 MsG0080047927.01.T01:CDS
GCAGCATGGATGAGATCATT+AGG 0.343293 contig149end:-11558 MsG0080047927.01.T01:CDS
TGAACTGTTTGAATTACTTC+AGG 0.344067 contig149end:+12524 MsG0080047927.01.T01:intergenic
TACAGCATCTCTTTCATCAT+TGG 0.353722 contig149end:+13003 MsG0080047927.01.T01:intergenic
CCATTCTTTCCTACTCCAAT+AGG 0.354840 contig149end:+8913 MsG0080047927.01.T01:intergenic
TTTGAGCAAGTGTACACTAA+TGG 0.365730 contig149end:-9225 MsG0080047927.01.T01:CDS
GACTGCTGAGGCTGTTGGCT+TGG 0.366549 contig149end:-12123 MsG0080047927.01.T01:CDS
GGAAGCCCAAGACAAATTAA+TGG 0.366795 contig149end:+8934 MsG0080047927.01.T01:intergenic
ACAATAAAATCAAATTAGAT+TGG 0.369866 contig149end:-9625 MsG0080047927.01.T01:CDS
AGGTATCAACATCATGGATT+TGG 0.369882 contig149end:-9422 MsG0080047927.01.T01:CDS
ATATTTGGTGTCATTTGATC+TGG 0.374089 contig149end:-9157 MsG0080047927.01.T01:CDS
GGAGCTGTTTGAATTACTTC+AGG 0.377034 contig149end:+12356 MsG0080047927.01.T01:intergenic
AGCTCCTCCTGGTGATGTTC+AGG 0.398389 contig149end:-12339 MsG0080047927.01.T01:CDS
GGAGCTGTTTGAATTACTTC+AGG 0.399290 contig149end:+12440 MsG0080047927.01.T01:intergenic
ATTGAACCATTAATTTGTCT+TGG 0.400705 contig149end:-8940 MsG0080047927.01.T01:CDS
TTGAACCATTAATTTGTCTT+GGG 0.402484 contig149end:-8939 MsG0080047927.01.T01:CDS
TGCTGAGGCTGTTGGCTTGG+AGG 0.403153 contig149end:-12120 MsG0080047927.01.T01:CDS
TCAAGAGCATCTTCTTGAAA+TGG 0.404173 contig149end:+9596 MsG0080047927.01.T01:intergenic
CGTCAATGAAGATGAAGAAT+TGG 0.408136 contig149end:-8878 MsG0080047927.01.T01:CDS
TGATAGTATTGATTCTGAAT+TGG 0.411998 contig149end:-9091 MsG0080047927.01.T01:CDS
AAAAGCTTGTTTACAGAAGA+TGG 0.412148 contig149end:-13451 MsG0080047927.01.T01:CDS
ATATCTATTCTGGGTGAAAT+CGG 0.415616 contig149end:-8994 MsG0080047927.01.T01:CDS
TCAGCACTAAAATTATTAGT+TGG 0.418641 contig149end:+9255 MsG0080047927.01.T01:intergenic
CTCTGAAATTGGCTACTGCC+AGG 0.424510 contig149end:-12018 MsG0080047927.01.T01:CDS
CTGCAATCAGAGCAGGTATT+GGG 0.430771 contig149end:-11691 MsG0080047927.01.T01:CDS
AGCTCCTCGTGATGATGTTC+AGG 0.431595 contig149end:-12423 MsG0080047927.01.T01:CDS
TTGAATTACTTCAGGAGCTT+CGG 0.436302 contig149end:+12532 MsG0080047927.01.T01:intergenic
GGAATCCCTGGCAGTTCTCA+TGG 0.438779 contig149end:+12388 MsG0080047927.01.T01:intergenic
TCTTCATTAGTTGGTAGCTT+CGG 0.441825 contig149end:+12254 MsG0080047927.01.T01:intergenic
AGTTCATCCTGATGATGTTC+AGG 0.447157 contig149end:-12507 MsG0080047927.01.T01:CDS
TCAGATATAATACTAACTAT+AGG 0.447670 contig149end:+11975 MsG0080047927.01.T01:intergenic
ATTGTCTGTCTCTATGTTGA+TGG 0.459451 contig149end:-9542 MsG0080047927.01.T01:CDS
ATATCTTCCTGAACATCATC+AGG 0.462427 contig149end:+12500 MsG0080047927.01.T01:intergenic
GTGGAGAAGTCTTCATTAGT+TGG 0.463175 contig149end:+12245 MsG0080047927.01.T01:intergenic
TTTCCATTGCTGAGGTGAAA+GGG 0.464441 contig149end:+13471 MsG0080047927.01.T01:intergenic
AATGGGGTGTGCCATTGGTT+GGG 0.465976 contig149end:-9207 MsG0080047927.01.T01:CDS
ATTATGTCAGAGATGACTAT+AGG 0.469185 contig149end:-9394 MsG0080047927.01.T01:intron
CAGCATGGATGAGATCATTA+GGG 0.472797 contig149end:-11557 MsG0080047927.01.T01:CDS
ACACTAATGGGGTGTGCCAT+TGG 0.481327 contig149end:-9212 MsG0080047927.01.T01:CDS
TAATGGGGTGTGCCATTGGT+TGG 0.483973 contig149end:-9208 MsG0080047927.01.T01:CDS
TACCATCTAATGTAATAGAT+AGG 0.490098 contig149end:-9442 MsG0080047927.01.T01:CDS
AGGACCTTCAGCGGAATCCC+TGG 0.490847 contig149end:+12376 MsG0080047927.01.T01:intergenic
TGTGCCATTGGTTGGGCGAA+AGG 0.492765 contig149end:-9200 MsG0080047927.01.T01:CDS
CCTATTGGAGTAGGAAAGAA+TGG 0.493014 contig149end:-8913 MsG0080047927.01.T01:CDS
AAATCGGTGTAAAAGAATCA+TGG 0.495574 contig149end:-8978 MsG0080047927.01.T01:CDS
ACTATGGAACCCATCTATTG+AGG 0.498702 contig149end:-9501 MsG0080047927.01.T01:CDS
CTTGGGCTTCCTATTGGAGT+AGG 0.500241 contig149end:-8922 MsG0080047927.01.T01:CDS
GCTGCAATCAGAGCAGGTAT+TGG 0.503867 contig149end:-11692 MsG0080047927.01.T01:CDS
GAATCCCTGGCAGTTCTCAT+GGG 0.505249 contig149end:+12389 MsG0080047927.01.T01:intergenic
TCATTAGTTGGTAGCTTCGG+TGG 0.513641 contig149end:+12257 MsG0080047927.01.T01:intergenic
CGTCAGACTGCTGAGGCTGT+TGG 0.517440 contig149end:-12128 MsG0080047927.01.T01:CDS
TAGTATTGATTCTGAATTGG+AGG 0.518636 contig149end:-9088 MsG0080047927.01.T01:CDS
ATAGCAGGTCACTCATACCC+TGG 0.521230 contig149end:+12000 MsG0080047927.01.T01:intergenic
AAGGAAAATAGATATTGATA+AGG 0.522014 contig149end:-9181 MsG0080047927.01.T01:CDS
ATTACTATCTGAGAATAAAA+GGG 0.522793 contig149end:+8803 MsG0080047927.01.T01:intergenic
CAAAGATATATAAATAATCT+GGG 0.523950 contig149end:+12946 MsG0080047927.01.T01:intergenic
TTAAGTACAGACACAATTCA+AGG 0.525799 contig149end:-8844 MsG0080047927.01.T01:CDS
GATAAATTCTGCTAGCCTCT+AGG 0.528874 contig149end:+12087 MsG0080047927.01.T01:intergenic
CGTTGACTTCCTCAATAGAT+GGG 0.534374 contig149end:+9492 MsG0080047927.01.T01:intergenic
TAAGGGAGATGAGACTTCCT+TGG 0.535684 contig149end:+12292 MsG0080047927.01.T01:intergenic
GAGTCTGATAATCCGTTGCC+AGG 0.539078 contig149end:+12223 MsG0080047927.01.T01:intergenic
ACGTGCTACACTGTCTGATA+CGG 0.540428 contig149end:+12148 MsG0080047927.01.T01:intergenic
ATACTATCATCCATATATGA+AGG 0.541720 contig149end:+9105 MsG0080047927.01.T01:intergenic
TTCAAGAATAGCAACTAGTC+GGG 0.543109 contig149end:+12058 MsG0080047927.01.T01:intergenic
TTCCATTGCTGAGGTGAAAG+GGG 0.544354 contig149end:+13472 MsG0080047927.01.T01:intergenic
CAGCTTCAGTATTGCAGAGG+AGG 0.544519 contig149end:-11602 MsG0080047927.01.T01:CDS
CACCCCTTTCACCTCAGCAA+TGG 0.545721 contig149end:-13474 MsG0080047927.01.T01:CDS
ATAGATAGGTATCAACATCA+TGG 0.548154 contig149end:-9428 MsG0080047927.01.T01:CDS
CTTCAAGAATAGCAACTAGT+CGG 0.550202 contig149end:+12057 MsG0080047927.01.T01:intergenic
GTAATTCAAACAGCTCCTCC+TGG 0.550982 contig149end:-12350 MsG0080047927.01.T01:CDS
ATCATTGGATATCAAAGCAA+TGG 0.552110 contig149end:+9038 MsG0080047927.01.T01:intergenic
GTCATTTGATCTGGCTAATG+AGG 0.552856 contig149end:-9148 MsG0080047927.01.T01:CDS
GTCTGATACGGAAGCTTGAG+AGG 0.555023 contig149end:+12160 MsG0080047927.01.T01:intergenic
ATAGCCTTAAAAGCAACTCA+TGG 0.556796 contig149end:-9299 MsG0080047927.01.T01:intron
ACTGCCAGGGATTCCGCTGA+AGG 0.557235 contig149end:-12380 MsG0080047927.01.T01:CDS
AGGACCTTCAGCGGAATCCT+CGG 0.561922 contig149end:+12460 MsG0080047927.01.T01:intergenic
GCATCTTCTTGAAATGGATA+CGG 0.564418 contig149end:+9602 MsG0080047927.01.T01:intergenic
GTGTGCCATCCATTCTGCAT+TGG 0.572943 contig149end:+12187 MsG0080047927.01.T01:intergenic
ACAACCCCATGAGAACTGCC+AGG 0.573534 contig149end:-12394 MsG0080047927.01.T01:CDS
CAGGTATTGGGCATTCTGCA+TGG 0.574473 contig149end:-11679 MsG0080047927.01.T01:CDS
AATTACTTCAGGACCTTCAG+CGG 0.576376 contig149end:+12367 MsG0080047927.01.T01:intergenic
AATTACTTCAGGACCTTCAG+CGG 0.576376 contig149end:+12451 MsG0080047927.01.T01:intergenic
TCTGAAATTGGCTACTGCCA+GGG 0.579123 contig149end:-12017 MsG0080047927.01.T01:CDS
TACTAACTATAGGAGATAGC+AGG 0.580560 contig149end:+11985 MsG0080047927.01.T01:intergenic
ACTACCGAGGATTCCGCTGA+AGG 0.582531 contig149end:-12464 MsG0080047927.01.T01:CDS
ACGTGCCAATGCAGAATGGA+TGG 0.582743 contig149end:-12192 MsG0080047927.01.T01:CDS
TAGATGGTATTGACACACTT+CGG 0.584242 contig149end:+9456 MsG0080047927.01.T01:intergenic
ATTGACACACTTCGGTTGCG+AGG 0.585703 contig149end:+9464 MsG0080047927.01.T01:intergenic
TAAGTACAGACACAATTCAA+GGG 0.585974 contig149end:-8843 MsG0080047927.01.T01:CDS
AAGACTTCTCCACCTGGCAA+CGG 0.590930 contig149end:-12235 MsG0080047927.01.T01:CDS
CAATACGTGCCAATGCAGAA+TGG 0.591191 contig149end:-12196 MsG0080047927.01.T01:CDS
TCCTCCTGGTGATGTTCAGG+AGG 0.594285 contig149end:-12336 MsG0080047927.01.T01:CDS
TATAGTTAGTATTATATCTG+AGG 0.596004 contig149end:-11973 MsG0080047927.01.T01:CDS
TCTGATACGGAAGCTTGAGA+GGG 0.598862 contig149end:+12161 MsG0080047927.01.T01:intergenic
GGAACTTAGTTCCACCATCA+CGG 0.599095 contig149end:+13422 MsG0080047927.01.T01:intergenic
GATCAAGCTGCAATCAGAGC+AGG 0.603915 contig149end:-11698 MsG0080047927.01.T01:CDS
GATGGTAGACTCCGTGATGG+TGG 0.605442 contig149end:-13433 MsG0080047927.01.T01:CDS
TTATCCTCCTGAACATCACC+AGG 0.613499 contig149end:+12332 MsG0080047927.01.T01:intergenic
TGAGCAAGTGTACACTAATG+GGG 0.614552 contig149end:-9223 MsG0080047927.01.T01:CDS
ATCATCCATATATGAAGGCG+TGG 0.615754 contig149end:+9110 MsG0080047927.01.T01:intergenic
TAGCAGCTTCAGTATTGCAG+AGG 0.627007 contig149end:-11605 MsG0080047927.01.T01:CDS
AGCAACAGATCATCTGTTGG+TGG 0.627709 contig149end:+11635 MsG0080047927.01.T01:intergenic
AATCCCTGGCAGTTCTCATG+GGG 0.632453 contig149end:+12390 MsG0080047927.01.T01:intergenic
TAAAGCAACAGATCATCTGT+TGG 0.632891 contig149end:+11632 MsG0080047927.01.T01:intergenic
GTTCCTGAAAGAGTGCGCAA+TGG 0.638036 contig149end:-13404 MsG0080047927.01.T01:CDS
CAACCCCATGAGAACTGCCA+GGG 0.646211 contig149end:-12393 MsG0080047927.01.T01:CDS
CATTGAAAAGTATAGCAGCA+TGG 0.650862 contig149end:-11572 MsG0080047927.01.T01:CDS
CTAATGAAGACTTCTCCACC+TGG 0.654850 contig149end:-12241 MsG0080047927.01.T01:CDS
TATTATATCTGAGGATCACG+AGG 0.658927 contig149end:-11964 MsG0080047927.01.T01:CDS
TCTGATAATCCGTTGCCAGG+TGG 0.661785 contig149end:+12226 MsG0080047927.01.T01:intergenic
CAATCCCATGAAAACTACCG+AGG 0.679403 contig149end:-12477 MsG0080047927.01.T01:CDS
CTGATACGGAAGCTTGAGAG+GGG 0.680007 contig149end:+12162 MsG0080047927.01.T01:intergenic
GAAGATGGTAGACTCCGTGA+TGG 0.689536 contig149end:-13436 MsG0080047927.01.T01:CDS
TGTAGCACGTCAGACTGCTG+AGG 0.694637 contig149end:-12135 MsG0080047927.01.T01:CDS
CAATCCCGTGAAAACTACCA+AGG 0.696202 contig149end:-12309 MsG0080047927.01.T01:CDS
GGAGGATTACGATCACCTAG+AGG 0.707323 contig149end:-12102 MsG0080047927.01.T01:CDS
TCCTCCTGAACATCACCAGG+AGG 0.720302 contig149end:+12335 MsG0080047926.01.T01:intergenic
TCTTCCTGAACATCATCACG+AGG 0.754707 contig149end:+12419 MsG0080047926.01.T01:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCAAAAAAGAAATAAT+AGG + contig149end:11009-11028 MsG0080047927.01.T01:intergenic 10.0%
!! ATCTATATAATAATTTAGAT+CGG + contig149end:12950-12969 MsG0080047927.01.T01:intergenic 10.0%
!!! GTAAATTATTTATTTCTTTA+TGG - contig149end:12160-12179 MsG0080047927.01.T01:CDS 10.0%
!! ACAAAGATATATAAATAATC+TGG + contig149end:9352-9371 MsG0080047927.01.T01:intergenic 15.0%
!! ACAATAAAATCAAATTAGAT+TGG - contig149end:12669-12688 MsG0080047927.01.T01:intron 15.0%
!! CAAAGATATATAAATAATCT+GGG + contig149end:9351-9370 MsG0080047927.01.T01:intergenic 15.0%
!! TAAAAATGAAATAGAAAGAA+TGG + contig149end:9066-9085 MsG0080047927.01.T01:intergenic 15.0%
!! TCTATATAATAATTTAGATC+GGG + contig149end:12949-12968 MsG0080047927.01.T01:intergenic 15.0%
!! TTAATATACAATTATGCATT+AGG - contig149end:9140-9159 MsG0080047927.01.T01:CDS 15.0%
!!! CATCTGAAATAAAAATAAAA+GGG - contig149end:11903-11922 MsG0080047927.01.T01:CDS 15.0%
!!! TATGAATATGATTTTGATTA+TGG + contig149end:12094-12113 MsG0080047927.01.T01:intergenic 15.0%
!!! TTAATTCAAAAGTTTTACTA+TGG - contig149end:12777-12796 MsG0080047927.01.T01:intron 15.0%
!!! TTTATGTTATTTATGTTAGA+AGG - contig149end:12126-12145 MsG0080047927.01.T01:CDS 15.0%
!! AACAGTAAGTTAAATGAAAT+TGG - contig149end:9540-9559 MsG0080047927.01.T01:CDS 20.0%
!! AAGGAAAATAGATATTGATA+AGG - contig149end:13113-13132 MsG0080047927.01.T01:intron 20.0%
!! AGATATTGATAAGGTATATT+TGG - contig149end:13122-13141 MsG0080047927.01.T01:intron 20.0%
!! ATCATTGTAATAGGAATTAT+TGG + contig149end:12571-12590 MsG0080047927.01.T01:intergenic 20.0%
!! CTTAATTTAAACTTTCAAAC+AGG - contig149end:11542-11561 MsG0080047927.01.T01:intron 20.0%
!! GAAAGTTTAAATTAAGTTAC+AGG + contig149end:11538-11557 MsG0080047927.01.T01:intergenic 20.0%
!! TAAAGTATAGGTGAATAAAT+TGG + contig149end:8926-8945 MsG0080047927.01.T01:intergenic 20.0%
!! TATAGTTAGTATTATATCTG+AGG - contig149end:10321-10340 MsG0080047927.01.T01:intron 20.0%
!! TCAGATATAATACTAACTAT+AGG + contig149end:10322-10341 MsG0080047927.01.T01:intergenic 20.0%
!! TGCAAAAATCATCAAATATA+AGG - contig149end:10440-10459 MsG0080047927.01.T01:intron 20.0%
!!! AGATATTAAATTCTAAAACC+TGG - contig149end:11314-11333 MsG0080047927.01.T01:intron 20.0%
!!! AGATATTAATTTCTAAAACC+TGG - contig149end:11267-11286 MsG0080047927.01.T01:intron 20.0%
!!! ATTTTCGTACACATTTAAAT+CGG + contig149end:12488-12507 MsG0080047927.01.T01:intergenic 20.0%
!!! GCATCTGAAATAAAAATAAA+AGG - contig149end:11902-11921 MsG0080047927.01.T01:CDS 20.0%
!!! GTTAACATGATATTTTCAAA+AGG + contig149end:11684-11703 MsG0080047927.01.T01:intergenic 20.0%
! AAAACATGCTCTTGAAATTA+GGG + contig149end:12533-12552 MsG0080047927.01.T01:intergenic 25.0%
! AAAATATACGTAGAGACAAA+TGG + contig149end:12004-12023 MsG0080047927.01.T01:intergenic 25.0%
! AAAGAAAGGATAAGGTAAAT+AGG + contig149end:9180-9199 MsG0080047927.01.T01:intergenic 25.0%
! AAATAAAAATAAAAGGGACC+GGG - contig149end:11909-11928 MsG0080047927.01.T01:CDS 25.0%
! ATAATAGGAAACATCTCTAT+TGG + contig149end:10994-11013 MsG0080047927.01.T01:intergenic 25.0%
! ATACTATCATCCATATATGA+AGG + contig149end:13192-13211 MsG0080047927.01.T01:intergenic 25.0%
! ATGCTGTAAAAACTCAAAAT+AGG - contig149end:9306-9325 MsG0080047927.01.T01:intron 25.0%
! CATAAACAAAATGTTAAACC+AGG + contig149end:11335-11354 MsG0080047927.01.T01:intergenic 25.0%
! CTCCAAATGCTTAAATAAAT+GGG + contig149end:10469-10488 MsG0080047927.01.T01:intergenic 25.0%
! GAAATAAAAATAAAAGGGAC+CGG - contig149end:11908-11927 MsG0080047927.01.T01:CDS 25.0%
! GATATTAATATTCTTGGTTC+TGG - contig149end:12719-12738 MsG0080047927.01.T01:intron 25.0%
! GCTCTTGATATTAATATTCT+TGG - contig149end:12713-12732 MsG0080047927.01.T01:intron 25.0%
! TAAATGTGTACGAAAATCAT+GGG - contig149end:12491-12510 MsG0080047927.01.T01:CDS 25.0%
! TAACAGTCTAATAGAAAGAA+AGG + contig149end:9194-9213 MsG0080047927.01.T01:intergenic 25.0%
! TAATAGGAAACATCTCTATT+GGG + contig149end:10993-11012 MsG0080047927.01.T01:intergenic 25.0%
! TACCATCTAATGTAATAGAT+AGG - contig149end:12852-12871 MsG0080047927.01.T01:intron 25.0%
! TACCTATCTATTACATTAGA+TGG + contig149end:12857-12876 MsG0080047927.01.T01:intergenic 25.0%
! TATACAATTATGCATTAGGA+AGG - contig149end:9144-9163 MsG0080047927.01.T01:CDS 25.0%
! TCAGCACTAAAATTATTAGT+TGG + contig149end:13042-13061 MsG0080047927.01.T01:intergenic 25.0%
! TCTAATAGAAAGAAAGGATA+AGG + contig149end:9188-9207 MsG0080047927.01.T01:intergenic 25.0%
! TCTCCAAATGCTTAAATAAA+TGG + contig149end:10470-10489 MsG0080047927.01.T01:intergenic 25.0%
! TGACAGAAATTAATCAAAGT+GGG - contig149end:12346-12365 MsG0080047927.01.T01:CDS 25.0%
! TTAAATGTGTACGAAAATCA+TGG - contig149end:12490-12509 MsG0080047927.01.T01:CDS 25.0%
!! ACTTTTCACATATCTATTCT+GGG - contig149end:13291-13310 MsG0080047927.01.T01:intron 25.0%
!! CATTTTAAATATCTGATGCA+GGG - contig149end:8983-9002 MsG0080047927.01.T01:CDS 25.0%
!! GAAGCACAAATTTAAAGTAT+AGG + contig149end:8938-8957 MsG0080047927.01.T01:intergenic 25.0%
!! TACTTTTCACATATCTATTC+TGG - contig149end:13290-13309 MsG0080047927.01.T01:intron 25.0%
!!! AACCTGGTATTTTTGTTTTA+AGG - contig149end:11283-11302 MsG0080047927.01.T01:intron 25.0%
!!! AAGATTGCTTTTTTGTGTAT+AGG - contig149end:10502-10521 MsG0080047927.01.T01:intron 25.0%
!!! ACATCAGGTTGATTTTTTTT+TGG - contig149end:9443-9462 MsG0080047927.01.T01:CDS 25.0%
!!! ACCTGGTATTTTTGTTTTAA+GGG - contig149end:11284-11303 MsG0080047927.01.T01:intron 25.0%
!!! ATTGAACCATTAATTTGTCT+TGG - contig149end:13354-13373 MsG0080047927.01.T01:intron 25.0%
!!! TATTTTTATTTCAGATGCAC+AGG + contig149end:11900-11919 MsG0080047927.01.T01:intergenic 25.0%
!!! TGATAGTATTGATTCTGAAT+TGG - contig149end:13203-13222 MsG0080047927.01.T01:intron 25.0%
!!! TTCTCTTATTCTCTAAAACA+GGG - contig149end:11145-11164 MsG0080047927.01.T01:intron 25.0%
!!! TTGAACCATTAATTTGTCTT+GGG - contig149end:13355-13374 MsG0080047927.01.T01:intron 25.0%
!!! TTTCTCTTATTCTCTAAAAC+AGG - contig149end:11144-11163 MsG0080047927.01.T01:intron 25.0%
AAATCGGTGTAAAAGAATCA+TGG - contig149end:13316-13335 MsG0080047927.01.T01:intron 30.0%
AATAAAAATAAAAGGGACCG+GGG - contig149end:11910-11929 MsG0080047927.01.T01:CDS 30.0%
AATAGGAAACATCTCTATTG+GGG + contig149end:10992-11011 MsG0080047927.01.T01:intergenic 30.0%
ACCCTTAAAACAAAAATACC+AGG + contig149end:11288-11307 MsG0080047927.01.T01:intergenic 30.0%
AGTGAACTAAAAATGAAGAC+TGG + contig149end:11629-11648 MsG0080047927.01.T01:intergenic 30.0%
ATAGAGAAGACAAGATCATT+AGG + contig149end:12437-12456 MsG0080047927.01.T01:intergenic 30.0%
ATAGATAGGTATCAACATCA+TGG - contig149end:12866-12885 MsG0080047927.01.T01:intron 30.0%
ATATCTATTCTGGGTGAAAT+CGG - contig149end:13300-13319 MsG0080047927.01.T01:intron 30.0%
ATCATTGGATATCAAAGCAA+TGG + contig149end:13259-13278 MsG0080047927.01.T01:intergenic 30.0%
ATTATGCATTAGGAAGGTTA+TGG - contig149end:9150-9169 MsG0080047927.01.T01:CDS 30.0%
ATTATGTCAGAGATGACTAT+AGG - contig149end:12900-12919 MsG0080047927.01.T01:intron 30.0%
ATTCATTTCGAGAAAAACCT+AGG - contig149end:12238-12257 MsG0080047927.01.T01:CDS 30.0%
CAAAACATGCTCTTGAAATT+AGG + contig149end:12534-12553 MsG0080047927.01.T01:intergenic 30.0%
CTGACAGAAATTAATCAAAG+TGG - contig149end:12345-12364 MsG0080047927.01.T01:CDS 30.0%
GAGACATGAATCATTGTAAT+AGG + contig149end:12580-12599 MsG0080047927.01.T01:intergenic 30.0%
GTGAACTAAAAATGAAGACT+GGG + contig149end:11628-11647 MsG0080047927.01.T01:intergenic 30.0%
TAAGTACAGACACAATTCAA+GGG - contig149end:13451-13470 MsG0080047927.01.T01:CDS 30.0%
TAGAGACAAATGGTTATCAT+AGG + contig149end:11994-12013 MsG0080047927.01.T01:intergenic 30.0%
TCAAAGATATGTGACTAACT+TGG + contig149end:11588-11607 MsG0080047927.01.T01:intergenic 30.0%
TCTCAACATAAATGAAACAG+AGG + contig149end:9410-9429 MsG0080047927.01.T01:intergenic 30.0%
TCTGTTTCATTTATGTTGAG+AGG - contig149end:9409-9428 MsG0080047927.01.T01:CDS 30.0%
TGAACTGTTTGAATTACTTC+AGG + contig149end:9773-9792 MsG0080047927.01.T01:intergenic 30.0%
TGCCCATTTATTTAAGCATT+TGG - contig149end:10464-10483 MsG0080047927.01.T01:intron 30.0%
TTAAGTACAGACACAATTCA+AGG - contig149end:13450-13469 MsG0080047927.01.T01:CDS 30.0%
TTCATTTATGTTGAGAGGAA+GGG - contig149end:9414-9433 MsG0080047927.01.T01:CDS 30.0%
TTGAGTCGTTATCTACAATT+AGG - contig149end:11108-11127 MsG0080047927.01.T01:intron 30.0%
TTTCATTTATGTTGAGAGGA+AGG - contig149end:9413-9432 MsG0080047927.01.T01:CDS 30.0%
! AAAAGCTTGTTTACAGAAGA+TGG - contig149end:8843-8862 MsG0080047927.01.T01:CDS 30.0%
! AATCTGCTAGTCTGAAATAT+TGG + contig149end:10911-10930 MsG0080047927.01.T01:intergenic 30.0%
! AATTAGGGTTTTCAAATGAG+AGG + contig149end:12518-12537 MsG0080047927.01.T01:intergenic 30.0%
! AGATGTTTTACAACCCTTAT+GGG - contig149end:12966-12985 MsG0080047927.01.T01:CDS 30.0%
! AGCTATGATATTTGTTAGCA+AGG - contig149end:11367-11386 MsG0080047927.01.T01:intron 30.0%
! AGTAGTGATTTTTGCATCAT+TGG + contig149end:13274-13293 MsG0080047927.01.T01:intergenic 30.0%
! ATTAGGGTTTTCAAATGAGA+GGG + contig149end:12517-12536 MsG0080047927.01.T01:intergenic 30.0%
! GCATTTTAAATATCTGATGC+AGG - contig149end:8982-9001 MsG0080047927.01.T01:CDS 30.0%
! GCTATGATATTTGTTAGCAA+GGG - contig149end:11368-11387 MsG0080047927.01.T01:intron 30.0%
! TAGATGTTTTACAACCCTTA+TGG - contig149end:12965-12984 MsG0080047927.01.T01:CDS 30.0%
!! AAGAAAGCACGACAAATTTT+AGG - contig149end:10379-10398 MsG0080047927.01.T01:intron 30.0%
!! ATATTTGGTGTCATTTGATC+TGG - contig149end:13137-13156 MsG0080047927.01.T01:intron 30.0%
!! ATTCTTGGTTCTGGAATTAA+TGG - contig149end:12728-12747 MsG0080047927.01.T01:intron 30.0%
!! GTGCTTCTTTTGTTTCTTTT+TGG - contig149end:8951-8970 MsG0080047927.01.T01:CDS 30.0%
!! TAGTATTGATTCTGAATTGG+AGG - contig149end:13206-13225 MsG0080047927.01.T01:intron 30.0%
!! TTTAGCTCTGCTAATTTACA+TGG - contig149end:11178-11197 MsG0080047927.01.T01:intron 30.0%
!!! GAGACGATCTCTTATTTTAT+TGG - contig149end:11496-11515 MsG0080047927.01.T01:intron 30.0%
!!! GGGTTTTTCTTTTGGTTTTT+CGG - contig149end:12284-12303 MsG0080047927.01.T01:CDS 30.0%
!!! TTGCTTTTTTGTGTATAGGA+TGG - contig149end:10506-10525 MsG0080047927.01.T01:intron 30.0%
AAGGCTATATATCTCCCATA+AGG + contig149end:12983-13002 MsG0080047927.01.T01:intergenic 35.0%
AATGGCTCTTTCAAATGAGA+AGG - contig149end:12398-12417 MsG0080047927.01.T01:CDS 35.0%
AATTGCCTACAACTTAGGAT+AGG + contig149end:11963-11982 MsG0080047927.01.T01:intergenic 35.0%
ACCAGAAATAAGCTCAACAA+AGG + contig149end:12639-12658 MsG0080047927.01.T01:intergenic 35.0%
ACCTTTGTTGAGCTTATTTC+TGG - contig149end:12635-12654 MsG0080047927.01.T01:intron 35.0%
ACTTTCAGTCGTATAAACCT+AGG + contig149end:12258-12277 MsG0080047927.01.T01:intergenic 35.0%
AGGCTATATATCTCCCATAA+GGG + contig149end:12982-13001 MsG0080047927.01.T01:intergenic 35.0%
AGGTATCAACATCATGGATT+TGG - contig149end:12872-12891 MsG0080047927.01.T01:intron 35.0%
ATACGACTGAAAGTCATAGT+GGG - contig149end:12264-12283 MsG0080047927.01.T01:CDS 35.0%
ATATCTTCCTGAACATCATC+AGG + contig149end:9797-9816 MsG0080047927.01.T01:intergenic 35.0%
ATTGTCTGTCTCTATGTTGA+TGG - contig149end:12752-12771 MsG0080047927.01.T01:intron 35.0%
CGTCAATGAAGATGAAGAAT+TGG - contig149end:13416-13435 MsG0080047927.01.T01:CDS 35.0%
CTCATGGAAGAAACTTGATT+TGG - contig149end:13011-13030 MsG0080047927.01.T01:CDS 35.0%
CTCTGCAATTAAATAAGCAC+CGG - contig149end:10934-10953 MsG0080047927.01.T01:intron 35.0%
CTTCAAGAATAGCAACTAGT+CGG + contig149end:10240-10259 MsG0080047927.01.T01:intergenic 35.0%
GCATCTTCTTGAAATGGATA+CGG + contig149end:12695-12714 MsG0080047927.01.T01:intergenic 35.0%
GGTGAAGACATAGAAATCAA+TGG - contig149end:12380-12399 MsG0080047927.01.T01:CDS 35.0%
GTAAATTAGCAGAGCTAAAC+TGG + contig149end:11177-11196 MsG0080047927.01.T01:intergenic 35.0%
GTGTGTTTGGTAGAAATCAT+GGG - contig149end:11460-11479 MsG0080047927.01.T01:intron 35.0%
TAAAGCAACAGATCATCTGT+TGG + contig149end:10665-10684 MsG0080047927.01.T01:intergenic 35.0%
TACACTTGTATGACTTAGAC+AGG - contig149end:9252-9271 MsG0080047927.01.T01:CDS 35.0%
TACAGCATCTCTTTCATCAT+TGG + contig149end:9294-9313 MsG0080047927.01.T01:intergenic 35.0%
TACTAACTATAGGAGATAGC+AGG + contig149end:10312-10331 MsG0080047927.01.T01:intergenic 35.0%
TATACGACTGAAAGTCATAG+TGG - contig149end:12263-12282 MsG0080047927.01.T01:CDS 35.0%
TATTATATCTGAGGATCACG+AGG - contig149end:10330-10349 MsG0080047927.01.T01:intron 35.0%
TCATTTATGTTGAGAGGAAG+GGG - contig149end:9415-9434 MsG0080047927.01.T01:CDS 35.0%
TGTGTGTTTGGTAGAAATCA+TGG - contig149end:11459-11478 MsG0080047927.01.T01:intron 35.0%
TTCAAGAATAGCAACTAGTC+GGG + contig149end:10239-10258 MsG0080047927.01.T01:intergenic 35.0%
TTGAACAGACTATTTGCCTT+GGG - contig149end:10559-10578 MsG0080047927.01.T01:intron 35.0%
TTGAATTACTTCAGGAGCTT+CGG + contig149end:9765-9784 MsG0080047927.01.T01:intergenic 35.0%
TTGAGCAAGTGTACACTAAT+GGG - contig149end:13070-13089 MsG0080047927.01.T01:intron 35.0%
TTTGAACAGACTATTTGCCT+TGG - contig149end:10558-10577 MsG0080047927.01.T01:intron 35.0%
TTTGAGCAAGTGTACACTAA+TGG - contig149end:13069-13088 MsG0080047927.01.T01:intron 35.0%
! AAATTTTAGGCTTGATGAGG+TGG - contig149end:10392-10411 MsG0080047927.01.T01:intron 35.0%
! AATTTTAGGCTTGATGAGGT+GGG - contig149end:10393-10412 MsG0080047927.01.T01:intron 35.0%
! ATAGCCTTAAAAGCAACTCA+TGG - contig149end:12995-13014 MsG0080047927.01.T01:CDS 35.0%
! ATCAGTTTTACGTGTGTGTT+TGG - contig149end:11447-11466 MsG0080047927.01.T01:intron 35.0%
! ATGTCTCTATTTTGTCGTGA+AGG + contig149end:10833-10852 MsG0080047927.01.T01:intergenic 35.0%
! CATTGAAAAGTATAGCAGCA+TGG - contig149end:10722-10741 MsG0080047927.01.T01:intron 35.0%
! GACAAATTTTAGGCTTGATG+AGG - contig149end:10389-10408 MsG0080047927.01.T01:intron 35.0%
! GTACACATTTAAATCGGTTC+AGG + contig149end:12482-12501 MsG0080047927.01.T01:intergenic 35.0%
! TAGAATGCTTGTTTCTCGAA+GGG - contig149end:11237-11256 MsG0080047927.01.T01:intron 35.0%
! TGTCTCTATTTTGTCGTGAA+GGG + contig149end:10832-10851 MsG0080047927.01.T01:intergenic 35.0%
! TTTAGTTCACTTCGTTGACA+AGG - contig149end:11638-11657 MsG0080047927.01.T01:CDS 35.0%
!! AAATCGGTTCAGGATTTTAG+AGG + contig149end:12472-12491 MsG0080047927.01.T01:intergenic 35.0%
!! GCACTATATGACTCTGAAAT+TGG - contig149end:10265-10284 MsG0080047927.01.T01:intron 35.0%
!! TAGATGGTATTGACACACTT+CGG + contig149end:12841-12860 MsG0080047927.01.T01:intergenic 35.0%
!! TCAAGAGCATCTTCTTGAAA+TGG + contig149end:12701-12720 MsG0080047927.01.T01:intergenic 35.0%
!! TCTTCATTAGTTGGTAGCTT+CGG + contig149end:10043-10062 MsG0080047927.01.T01:intergenic 35.0%
!! TTGAGCTTATTTCTGGTGAT+AGG - contig149end:12642-12661 MsG0080047927.01.T01:intron 35.0%
!!! CTTTTTTGTGTATAGGATGG+TGG - contig149end:10509-10528 MsG0080047927.01.T01:intron 35.0%
!!! GTCATAGTGGGTTTTTCTTT+TGG - contig149end:12276-12295 MsG0080047927.01.T01:CDS 35.0%
!!! TCTTCCATGAGTTGCTTTTA+AGG + contig149end:13002-13021 MsG0080047927.01.T01:intergenic 35.0%
AATCAGCTATGAAGAGGTGA+TGG - contig149end:9566-9585 MsG0080047927.01.T01:CDS 40.0%
AATGGTTATCATAGGTTCCC+TGG + contig149end:11986-12005 MsG0080047927.01.T01:intergenic 40.0%
AATTACTTCAGGACCTTCAG+CGG + contig149end:9846-9865 MsG0080047927.01.T01:intergenic 40.0%
AATTCAAGGGCTTGCATTAC+AGG - contig149end:13464-13483 MsG0080047927.01.T01:CDS 40.0%
ACTTACACTCCAAGTAGGAA+AGG + contig149end:9040-9059 MsG0080047927.01.T01:intergenic 40.0%
AGATGACGCACATAACTTAG+TGG - contig149end:10803-10822 MsG0080047927.01.T01:intron 40.0%
ATCATCCATATATGAAGGCG+TGG + contig149end:13187-13206 MsG0080047927.01.T01:intergenic 40.0%
ATTTGCCTTGGGAAGTAATG+TGG - contig149end:10570-10589 MsG0080047927.01.T01:intron 40.0%
ATTTGTCTTGGGCTTCCTAT+TGG - contig149end:13366-13385 MsG0080047927.01.T01:intron 40.0%
CAAACTTCAGCCCTTATTCT+AGG + contig149end:9016-9035 MsG0080047927.01.T01:intergenic 40.0%
CAGCATGGATGAGATCATTA+GGG - contig149end:10737-10756 MsG0080047927.01.T01:intron 40.0%
CCATTCTTTCCTACTCCAAT+AGG + contig149end:13384-13403 MsG0080047927.01.T01:intergenic 40.0%
CCTATTGGAGTAGGAAAGAA+TGG - contig149end:13381-13400 MsG0080047927.01.T01:intron 40.0%
CGGTGCTTATTTAATTGCAG+AGG + contig149end:10936-10955 MsG0080047927.01.T01:intergenic 40.0%
CTAAGTTGTAGGCAATTCCA+GGG - contig149end:11966-11985 MsG0080047927.01.T01:CDS 40.0%
CTAGAATAAGGGCTGAAGTT+TGG - contig149end:9014-9033 MsG0080047927.01.T01:CDS 40.0%
CTGCATAACTTAGCGATCAA+GGG - contig149end:12027-12046 MsG0080047927.01.T01:CDS 40.0%
GAAGCTGAATATTCGTTGGA+AGG - contig149end:9685-9704 MsG0080047927.01.T01:intron 40.0%
GAGTAGTAAGCAGAAGAAAC+TGG + contig149end:11850-11869 MsG0080047927.01.T01:intergenic 40.0%
GATTTCAGACACCAATCTGA+TGG - contig149end:11030-11049 MsG0080047927.01.T01:intron 40.0%
GGAAGCCCAAGACAAATTAA+TGG + contig149end:13363-13382 MsG0080047927.01.T01:intergenic 40.0%
GGAGCTGTTTGAATTACTTC+AGG + contig149end:9857-9876 MsG0080047927.01.T01:intergenic 40.0%
GGGTGTTCATCCTAGAATAA+GGG - contig149end:9003-9022 MsG0080047927.01.T01:CDS 40.0%
GTCATTTGATCTGGCTAATG+AGG - contig149end:13146-13165 MsG0080047927.01.T01:intron 40.0%
GTGGAGAAGTCTTCATTAGT+TGG + contig149end:10052-10071 MsG0080047927.01.T01:intergenic 40.0%
TAAGCATTTGGAGAAGCTTC+AGG - contig149end:10476-10495 MsG0080047927.01.T01:intron 40.0%
TATAAGGAGGCAACTAGAGT+TGG - contig149end:10416-10435 MsG0080047927.01.T01:intron 40.0%
TCAGCAATTCTAGCGAACAA+GGG + contig149end:12329-12348 MsG0080047927.01.T01:intergenic 40.0%
TCCAACGAATATTCAGCTTC+TGG + contig149end:9685-9704 MsG0080047927.01.T01:intergenic 40.0%
TCCAGAAGCTGAATATTCGT+TGG - contig149end:9681-9700 MsG0080047927.01.T01:intron 40.0%
TCTGCATAACTTAGCGATCA+AGG - contig149end:12026-12045 MsG0080047927.01.T01:CDS 40.0%
TGAGCAAGTGTACACTAATG+GGG - contig149end:13071-13090 MsG0080047927.01.T01:intron 40.0%
TGAGTTTCCTGCATTGTCTA+CGG + contig149end:9504-9523 MsG0080047927.01.T01:intergenic 40.0%
TGGTGAAATCAGCTATGAAG+AGG - contig149end:9560-9579 MsG0080047927.01.T01:CDS 40.0%
TTCCACCTATCCTAAGTTGT+AGG - contig149end:11955-11974 MsG0080047927.01.T01:CDS 40.0%
TTTCCATTGCTGAGGTGAAA+GGG + contig149end:8826-8845 MsG0080047927.01.T01:intergenic 40.0%
TTTGCCTTGGGAAGTAATGT+GGG - contig149end:10571-10590 MsG0080047927.01.T01:intron 40.0%
! AACAAGCTTTTCCATTGCTG+AGG + contig149end:8834-8853 MsG0080047927.01.T01:intergenic 40.0%
! AGGGTGTTCATCCTAGAATA+AGG - contig149end:9002-9021 MsG0080047927.01.T01:CDS 40.0%
! AGTTCATCCTGATGATGTTC+AGG - contig149end:9787-9806 MsG0080047927.01.T01:intron 40.0%
! CAAGCATTCTAGTTAAGCGA+TGG + contig149end:11228-11247 MsG0080047927.01.T01:intergenic 40.0%
! CTAGAATGCTTGTTTCTCGA+AGG - contig149end:11236-11255 MsG0080047927.01.T01:intron 40.0%
! GAATCCTCGGTAGTTTTCAT+GGG + contig149end:9824-9843 MsG0080047927.01.T01:intergenic 40.0%
! GATAAATTCTGCTAGCCTCT+AGG + contig149end:10210-10229 MsG0080047927.01.T01:intergenic 40.0%
! GGTAGAAATCATGGGTTGAA+TGG - contig149end:11468-11487 MsG0080047927.01.T01:intron 40.0%
! TAAGCGATGGCTGATTCAAA+AGG + contig149end:11215-11234 MsG0080047927.01.T01:intergenic 40.0%
! TTTTCCATTGCTGAGGTGAA+AGG + contig149end:8827-8846 MsG0080047927.01.T01:intergenic 40.0%
!! ACTTCCTTGGTAGTTTTCAC+GGG + contig149end:9992-10011 MsG0080047927.01.T01:intergenic 40.0%
!! GACTTCCTTGGTAGTTTTCA+CGG + contig149end:9993-10012 MsG0080047927.01.T01:intergenic 40.0%
!! GGTGGAACTTTTTCCTGTAA+GGG + contig149end:10022-10041 MsG0080047927.01.T01:intergenic 40.0%
!! TTTTGTGTATAGGATGGTGG+TGG - contig149end:10512-10531 MsG0080047927.01.T01:intron 40.0%
AAGAACTCCGTAGACAATGC+AGG - contig149end:9494-9513 MsG0080047927.01.T01:CDS 45.0%
ACACCAATCTGATGGCTCTT+TGG - contig149end:11038-11057 MsG0080047927.01.T01:intron 45.0%
ACGTGCTACACTGTCTGATA+CGG + contig149end:10149-10168 MsG0080047927.01.T01:intergenic 45.0%
AGCAACAGATCATCTGTTGG+TGG + contig149end:10662-10681 MsG0080047927.01.T01:intergenic 45.0%
AGCAATTCTAGCGAACAAGG+GGG + contig149end:12327-12346 MsG0080047927.01.T01:intergenic 45.0%
AGGGAATGCAATAGCATGTC+AGG - contig149end:10756-10775 MsG0080047927.01.T01:intron 45.0%
CAATACGTGCCAATGCAGAA+TGG - contig149end:10098-10117 MsG0080047927.01.T01:intron 45.0%
CAATCCCATGAAAACTACCG+AGG - contig149end:9817-9836 MsG0080047927.01.T01:intron 45.0%
CAATCCCGTGAAAACTACCA+AGG - contig149end:9985-10004 MsG0080047927.01.T01:intron 45.0%
CAGCAATTCTAGCGAACAAG+GGG + contig149end:12328-12347 MsG0080047927.01.T01:intergenic 45.0%
CCTAAGTTGTAGGCAATTCC+AGG - contig149end:11965-11984 MsG0080047927.01.T01:CDS 45.0%
CCTGGAATTGCCTACAACTT+AGG + contig149end:11968-11987 MsG0080047927.01.T01:intergenic 45.0%
CTAATGAAGACTTCTCCACC+TGG - contig149end:10053-10072 MsG0080047927.01.T01:intron 45.0%
CTGACAAAGTGTGCTTTACG+AGG + contig149end:12602-12621 MsG0080047927.01.T01:intergenic 45.0%
CTGCAATCAGAGCAGGTATT+GGG - contig149end:10603-10622 MsG0080047927.01.T01:intron 45.0%
GCAGCATGGATGAGATCATT+AGG - contig149end:10736-10755 MsG0080047927.01.T01:intron 45.0%
GGAACTTAGTTCCACCATCA+CGG + contig149end:8875-8894 MsG0080047927.01.T01:intergenic 45.0%
GGCATACTTACACTCCAAGT+AGG + contig149end:9045-9064 MsG0080047927.01.T01:intergenic 45.0%
GTAATTCAAACAGCTCCTCC+TGG - contig149end:9944-9963 MsG0080047927.01.T01:intron 45.0%
GTCAGCAATTCTAGCGAACA+AGG + contig149end:12330-12349 MsG0080047927.01.T01:intergenic 45.0%
TAAGGGAGATGAGACTTCCT+TGG + contig149end:10005-10024 MsG0080047927.01.T01:intergenic 45.0%
TACGTCCACGCCTTCATATA+TGG - contig149end:13179-13198 MsG0080047927.01.T01:intron 45.0%
TAGCAGCTTCAGTATTGCAG+AGG - contig149end:10689-10708 MsG0080047927.01.T01:intron 45.0%
TCTGATACGGAAGCTTGAGA+GGG + contig149end:10136-10155 MsG0080047927.01.T01:intergenic 45.0%
TCTTCCTGAACATCATCACG+AGG + contig149end:9878-9897 MsG0080047927.01.T01:intergenic 45.0%
TGAGACATTATGTCTCACCC+CGG + contig149end:11930-11949 MsG0080047927.01.T01:intergenic 45.0%
TGCCTACAACTTAGGATAGG+TGG + contig149end:11960-11979 MsG0080047927.01.T01:intergenic 45.0%
TTATCCTCCTGAACATCACC+AGG + contig149end:9965-9984 MsG0080047927.01.T01:intergenic 45.0%
TTCCATTGCTGAGGTGAAAG+GGG + contig149end:8825-8844 MsG0080047927.01.T01:intergenic 45.0%
TTGATGAGGTGGGTATAAGG+AGG - contig149end:10403-10422 MsG0080047927.01.T01:intron 45.0%
! GAAGTTTGGCCTTTCCTACT+TGG - contig149end:9028-9047 MsG0080047927.01.T01:CDS 45.0%
! GGAATCCTCGGTAGTTTTCA+TGG + contig149end:9825-9844 MsG0080047927.01.T01:intergenic 45.0%
! GGTGGTGGTATTGTTTCGAA+GGG - contig149end:10527-10546 MsG0080047927.01.T01:intron 45.0%
! TCTGAAATTGGCTACTGCCA+GGG - contig149end:10277-10296 MsG0080047927.01.T01:intron 45.0%
! TTTTCCTTTCGCCCAACCAA+TGG + contig149end:13101-13120 MsG0080047927.01.T01:intergenic 45.0%
!! CGGTGGAACTTTTTCCTGTA+AGG + contig149end:10023-10042 MsG0080047927.01.T01:intergenic 45.0%
!! GAGGCTTTCTGGTGTTTTGT+TGG - contig149end:10349-10368 MsG0080047927.01.T01:intron 45.0%
!! TCATTAGTTGGTAGCTTCGG+TGG + contig149end:10040-10059 MsG0080047927.01.T01:intergenic 45.0%
!! TGGAGTTTTGTCTGGCTAGA+CGG + contig149end:9665-9684 MsG0080047927.01.T01:intergenic 45.0%
!! TGGTGGTGGTATTGTTTCGA+AGG - contig149end:10526-10545 MsG0080047927.01.T01:intron 45.0%
!!! TCAGCTTCTGGAGTTTTGTC+TGG + contig149end:9673-9692 MsG0080047927.01.T01:intergenic 45.0%
AAGACTTCTCCACCTGGCAA+CGG - contig149end:10059-10078 MsG0080047927.01.T01:intron 50.0%
AATCCCTGGCAGTTCTCATG+GGG + contig149end:9907-9926 MsG0080047927.01.T01:intergenic 50.0%
ACACTAATGGGGTGTGCCAT+TGG - contig149end:13082-13101 MsG0080047927.01.T01:intron 50.0%
ACGTGCCAATGCAGAATGGA+TGG - contig149end:10102-10121 MsG0080047927.01.T01:intron 50.0%
ACTCCATTGCGCACTCTTTC+AGG + contig149end:8896-8915 MsG0080047927.01.T01:intergenic 50.0%
ATAGCAGGTCACTCATACCC+TGG + contig149end:10297-10316 MsG0080047927.01.T01:intergenic 50.0%
ATTGACACACTTCGGTTGCG+AGG + contig149end:12833-12852 MsG0080047927.01.T01:intergenic 50.0%
CAGCTTCAGTATTGCAGAGG+AGG - contig149end:10692-10711 MsG0080047927.01.T01:intron 50.0%
CGCAAGCAGGATTGTTTGCA+TGG + contig149end:11872-11891 MsG0080047927.01.T01:intergenic 50.0%
CTGATACGGAAGCTTGAGAG+GGG + contig149end:10135-10154 MsG0080047927.01.T01:intergenic 50.0%
CTTGGGCTTCCTATTGGAGT+AGG - contig149end:13372-13391 MsG0080047927.01.T01:intron 50.0%
GAAGATGGTAGACTCCGTGA+TGG - contig149end:8858-8877 MsG0080047927.01.T01:CDS 50.0%
GAATCCCTGGCAGTTCTCAT+GGG + contig149end:9908-9927 MsG0080047927.01.T01:intergenic 50.0%
GAGTCTGATAATCCGTTGCC+AGG + contig149end:10074-10093 MsG0080047927.01.T01:intergenic 50.0%
GATCAAGCTGCAATCAGAGC+AGG - contig149end:10596-10615 MsG0080047927.01.T01:intron 50.0%
GCTCCAAAGAGCCATCAGAT+TGG + contig149end:11044-11063 MsG0080047927.01.T01:intergenic 50.0%
GCTGCAATCAGAGCAGGTAT+TGG - contig149end:10602-10621 MsG0080047927.01.T01:intron 50.0%
GGAAGTCTCATCTCCCTTAC+AGG - contig149end:10006-10025 MsG0080047927.01.T01:intron 50.0%
GGAGGATTACGATCACCTAG+AGG - contig149end:10192-10211 MsG0080047927.01.T01:intron 50.0%
GGCTTGATGAGGTGGGTATA+AGG - contig149end:10400-10419 MsG0080047927.01.T01:intron 50.0%
GGTCTGACAGAGCAATAAGC+CGG + contig149end:10971-10990 MsG0080047927.01.T01:intergenic 50.0%
GTCTGACAGAGCAATAAGCC+GGG + contig149end:10970-10989 MsG0080047927.01.T01:intergenic 50.0%
GTCTGATACGGAAGCTTGAG+AGG + contig149end:10137-10156 MsG0080047927.01.T01:intergenic 50.0%
GTGTGCCATCCATTCTGCAT+TGG + contig149end:10110-10129 MsG0080047927.01.T01:intergenic 50.0%
TCTGATAATCCGTTGCCAGG+TGG + contig149end:10071-10090 MsG0080047927.01.T01:intergenic 50.0%
TCTGCCCACATTACTTCCCA+AGG + contig149end:10578-10597 MsG0080047927.01.T01:intergenic 50.0%
! AATGGGGTGTGCCATTGGTT+GGG - contig149end:13087-13106 MsG0080047927.01.T01:intron 50.0%
! AGCTCCTCGTGATGATGTTC+AGG - contig149end:9871-9890 MsG0080047927.01.T01:intron 50.0%
! GGAGCACCTTTGCAAAGAGA+GGG - contig149end:11059-11078 MsG0080047927.01.T01:intron 50.0%
! GTTCCTGAAAGAGTGCGCAA+TGG - contig149end:8890-8909 MsG0080047927.01.T01:CDS 50.0%
! TAATGGGGTGTGCCATTGGT+TGG - contig149end:13086-13105 MsG0080047927.01.T01:intron 50.0%
! TGGAGCACCTTTGCAAAGAG+AGG - contig149end:11058-11077 MsG0080047927.01.T01:intron 50.0%
!! CAGGTATTGGGCATTCTGCA+TGG - contig149end:10615-10634 MsG0080047927.01.T01:intron 50.0%
!! CTCTGAAATTGGCTACTGCC+AGG - contig149end:10276-10295 MsG0080047927.01.T01:intron 50.0%
!! GAGGAAGGGGTGTTAACATC+AGG - contig149end:9428-9447 MsG0080047927.01.T01:CDS 50.0%
!! GGAGTTTTGTCTGGCTAGAC+GGG + contig149end:9664-9683 MsG0080047927.01.T01:intergenic 50.0%
!! TCAAAGTGGGAGCACTGCAT+TGG - contig149end:12359-12378 MsG0080047927.01.T01:CDS 50.0%
ACAACCCCATGAGAACTGCC+AGG - contig149end:9900-9919 MsG0080047927.01.T01:intron 55.0%
ACTACCGAGGATTCCGCTGA+AGG - contig149end:9830-9849 MsG0080047927.01.T01:intron 55.0%
AGGACCTTCAGCGGAATCCT+CGG + contig149end:9837-9856 MsG0080047927.01.T01:intergenic 55.0%
CAACCCCATGAGAACTGCCA+GGG - contig149end:9901-9920 MsG0080047927.01.T01:intron 55.0%
CACCCCTTTCACCTCAGCAA+TGG - contig149end:8820-8839 MsG0080047927.01.T01:CDS 55.0%
CCACCACCCTCTCTTTGCAA+AGG + contig149end:11068-11087 MsG0080047927.01.T01:intergenic 55.0%
CCTTTGCAAAGAGAGGGTGG+TGG - contig149end:11065-11084 MsG0080047927.01.T01:intron 55.0%
CTGAGGATCACGAGGCTTTC+TGG - contig149end:10338-10357 MsG0080047927.01.T01:intron 55.0%
GATGGTAGACTCCGTGATGG+TGG - contig149end:8861-8880 MsG0080047927.01.T01:CDS 55.0%
GCACCTTTGCAAAGAGAGGG+TGG - contig149end:11062-11081 MsG0080047927.01.T01:intron 55.0%
GGAATCCCTGGCAGTTCTCA+TGG + contig149end:9909-9928 MsG0080047927.01.T01:intergenic 55.0%
TCCTCCTGAACATCACCAGG+AGG + contig149end:9962-9981 MsG0080047927.01.T01:intergenic 55.0%
TGTAGCACGTCAGACTGCTG+AGG - contig149end:10159-10178 MsG0080047927.01.T01:intron 55.0%
! AGCTCCTCCTGGTGATGTTC+AGG - contig149end:9955-9974 MsG0080047927.01.T01:intron 55.0%
! TCCTCCTGGTGATGTTCAGG+AGG - contig149end:9958-9977 MsG0080047927.01.T01:intron 55.0%
! TGATGATGCAGCCAGTGCCA+GGG - contig149end:9634-9653 MsG0080047927.01.T01:intron 55.0%
! TGTGCCATTGGTTGGGCGAA+AGG - contig149end:13094-13113 MsG0080047927.01.T01:intron 55.0%
ACTGCCAGGGATTCCGCTGA+AGG - contig149end:9914-9933 MsG0080047927.01.T01:intron 60.0%
AGACGGGAATTCCCTGGCAC+TGG + contig149end:9648-9667 MsG0080047927.01.T01:intergenic 60.0%
AGGACCTTCAGCGGAATCCC+TGG + contig149end:9921-9940 MsG0080047927.01.T01:intergenic 60.0%
CGTCAGACTGCTGAGGCTGT+TGG - contig149end:10166-10185 MsG0080047927.01.T01:intron 60.0%
CTGGCTAGACGGGAATTCCC+TGG + contig149end:9654-9673 MsG0080047927.01.T01:intergenic 60.0%
TGCACAGGTTGCTCGCAAGC+AGG + contig149end:11885-11904 MsG0080047927.01.T01:intergenic 60.0%
! CTGATGATGCAGCCAGTGCC+AGG - contig149end:9633-9652 MsG0080047927.01.T01:CDS 60.0%
! GACTGCTGAGGCTGTTGGCT+TGG - contig149end:10171-10190 MsG0080047927.01.T01:intron 60.0%
!! TGCTGAGGCTGTTGGCTTGG+AGG - contig149end:10174-10193 MsG0080047927.01.T01:intron 60.0%
TAAGCCGGGCAGCGCAACTC+CGG + contig149end:10956-10975 MsG0080047927.01.T01:intergenic 65.0%
! AGCACCGGAGTTGCGCTGCC+CGG - contig149end:10949-10968 MsG0080047927.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
contig149end gene 8807 13509 8807 ID=MsG0080047927.01;Name=MsG0080047927.01
contig149end mRNA 8807 13509 8807 ID=MsG0080047927.01.T01;Parent=MsG0080047927.01;Name=MsG0080047927.01.T01;_AED=0.28;_eAED=0.29;_QI=0|0|0|1|1|1|6|0|602
contig149end exon 13403 13509 13403 ID=MsG0080047927.01.T01:exon:0;Parent=MsG0080047927.01.T01
contig149end exon 12945 13042 12945 ID=MsG0080047927.01.T01:exon:1;Parent=MsG0080047927.01.T01
contig149end exon 11902 12560 11902 ID=MsG0080047927.01.T01:exon:2;Parent=MsG0080047927.01.T01
contig149end exon 11544 11719 11544 ID=MsG0080047927.01.T01:exon:3;Parent=MsG0080047927.01.T01
contig149end exon 9395 9652 9395 ID=MsG0080047927.01.T01:exon:4;Parent=MsG0080047927.01.T01
contig149end exon 8807 9317 8807 ID=MsG0080047927.01.T01:exon:5;Parent=MsG0080047927.01.T01
contig149end CDS 13403 13509 13403 ID=MsG0080047927.01.T01:cds;Parent=MsG0080047927.01.T01
contig149end CDS 12945 13042 12945 ID=MsG0080047927.01.T01:cds;Parent=MsG0080047927.01.T01
contig149end CDS 11902 12560 11902 ID=MsG0080047927.01.T01:cds;Parent=MsG0080047927.01.T01
contig149end CDS 11544 11719 11544 ID=MsG0080047927.01.T01:cds;Parent=MsG0080047927.01.T01
contig149end CDS 9395 9652 9395 ID=MsG0080047927.01.T01:cds;Parent=MsG0080047927.01.T01
contig149end CDS 8807 9317 8807 ID=MsG0080047927.01.T01:cds;Parent=MsG0080047927.01.T01
Gene Sequence

>MsG0080047927.01.T01

CAGGAAAAGAAAACACCCCTTTCACCTCAGCAATGGAAAAGCTTGTTTACAGAAGATGGTAGACTCCGTGATGGTGGAACTAAGTTCCTGAAAGAGTGCGCAATGGAGTATGACTTTAGCAGCACCAATGATGAAAGAGATGCTGTAAAAACTCAAAATAGGTTAGCATACAAGTTTAATTCCCAGATTATTTATATATCTTTGTATTCTTCCGAAGCTCCTGAAGTAATTCAAACAGTTCATCCTGATGATGTTCAGGAAGATATCAATCCCATGAAAACTACCGAGGATTCCGCTGAAGGTCCTGAAGTAATTCAAACAGCTCCTCGTGATGATGTTCAGGAAGATAACAACCCCATGAGAACTGCCAGGGATTCCGCTGAAGGTCCTGAAGTAATTCAAACAGCTCCTCCTGGTGATGTTCAGGAGGATAACAATCCCGTGAAAACTACCAAGGAAGTCTCATCTCCCTTACAGGAAAAAGTTCCACCGAAGCTACCAACTAATGAAGACTTCTCCACCTGGCAACGGATTATCAGACTCGATGCAATACGTGCCAATGCAGAATGGATGGCACACTACCCCTCTCAAGCTTCCGTATCAGACAGTGTAGCACGTCAGACTGCTGAGGCTGTTGGCTTGGAGGATTACGATCACCTAGAGGCTAGCAGAATTTATCATGCTGCCCGACTAGTTGCTATTCTTGAAGCATATGCACTATATGACTCTGAAATTGGCTACTGCCAGGGTATGAGTGACCTGCTATCTCCTATAGTTAGTATTATATCTGAGGATCACGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAAGCACGACAAATTTTAGGCTTGATGAGGTGGATCAAGCTGCAATCAGAGCAGGTATTGGGCATTCTGCATGGAACAAAGTTCGAAAGCGTGCACCACCAACAGATGATCTGTTGCTTTACGCATAGCAGCTTCAGTATTGCAGAGGAGGAATTGATCATTGAAAAGTATAGCAGCATGGATGAGATCATTAGGGAATGCAATAGCATGTTTGACAATAAAATCAAATTAGATTGGCCGTATCCATTTCAAGAAGATGCTCTTGATATTAATATTCTTGGTTCTGGAATTAATGGAATTGTCTGTCTCTATGTTGATGGTATTAATTCAAAAGTTTTACTATGGAACCCATCTATTGAGGAAGTCAACGTCATTCCTCGCAACCGAAGTGTGTCAATACCATCTAATGTAATAGATAGGTATCAACATCATGGATTTGGTTATGATTATGTCAGAGATGACTATAGCCTTAAAAGCAACTCATGGAAGAAACTTGATTTGGACATGCCAACTAATAATTTTAGTGCTGAATTTGTTTTTGAGCAAGTGTACACTAATGGGGTGTGCCATTGGTTGGGCGAAAGGAAAATAGATATTGATAAGGTATATTTGGTGTCATTTGATCTGGCTAATGAGGTATTCTTTCTTACGTCCACGCCTTCATATATGGATGATAGTATTGATTCTGAATTGGAGGATACTCGTTTAATGTTGTTAAATGAATCCATTGCTTTGATATCCAATGATGCAAAAATCACTACTTTTCACATATCTATTCTGGGTGAAATCGGTGTAAAAGAATCATGGACTAAGCTATTCATTATTGAACCATTAATTTGTCTTGGGCTTCCTATTGGAGTAGGAAAGAATGGTGATATATTCTTCGTCAATGAAGATGAAGAATTGGTCAAGTATGATTTAAGTACAGACACAATTCAAGGGCTTGCATTACAGGAGATCCCTTTTATTCTCAGATAG
Protein sequence

>MsG0080047927.01.T01

QEKKTPLSPQQWKSLFTEDGRLRDGGTKFLKECAMEYDFSSTNDERDAVKTQNRLAYKFNSQIIYISLYSSEAPEVIQTVHPDDVQEDINPMKTTEDSAEGPEVIQTAPRDDVQEDNNPMRTARDSAEGPEVIQTAPPGDVQEDNNPVKTTKEVSSPLQEKVPPKLPTNEDFSTWQRIIRLDAIRANAEWMAHYPSQASVSDSVARQTAEAVGLEDYDHLEASRIYHAARLVAILEAYALYDSEIGYCQGMSDLLSPIVSIISEDHEAFWCFVGFMKKARQILGLMRWIKLQSEQVLGILHGTKFESVHHQQMICCFTHSSFSIAEEELIIEKYSSMDEIIRECNSMFDNKIKLDWPYPFQEDALDINILGSGINGIVCLYVDGINSKVLLWNPSIEEVNVIPRNRSVSIPSNVIDRYQHHGFGYDYVRDDYSLKSNSWKKLDLDMPTNNFSAEFVFEQVYTNGVCHWLGERKIDIDKVYLVSFDLANEVFFLTSTPSYMDDSIDSELEDTRLMLLNESIALISNDAKITTFHISILGEIGVKESWTKLFIIEPLICLGLPIGVGKNGDIFFVNEDEELVKYDLSTDTIQGLALQEIPFILR*