AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011059.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011059.01.T01 MTR_2g098010 68.421 209 7 3 1 160 1 199 9.15e-91 265
MsG0280011059.01.T01 MTR_5g079740 67.943 209 8 3 1 160 1 199 3.29e-90 263
MsG0280011059.01.T01 MTR_5g079740 59.859 142 8 2 68 160 1 142 2.15e-46 150
MsG0280011059.01.T01 MTR_4g023520 94.118 34 2 0 68 101 1 34 3.99e-14 68.9
MsG0280011059.01.T01 MTR_7g088490 28.276 145 92 2 9 151 2 136 3.32e-12 62.8
MsG0280011059.01.T01 MTR_4g087680 27.972 143 91 2 11 151 4 136 5.23e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011059.01.T01 AT3G60820 60.849 212 24 4 1 163 1 202 1.57e-80 238
MsG0280011059.01.T01 AT3G60820 61.244 209 22 4 1 160 1 199 4.54e-80 237
MsG0280011059.01.T01 AT3G60820 61.244 209 22 4 1 160 1 199 4.54e-80 237
MsG0280011059.01.T01 AT1G77440 30.872 149 83 3 9 151 2 136 8.39e-14 67.0
MsG0280011059.01.T01 AT1G77440 30.872 149 83 3 9 151 2 136 8.39e-14 67.0
MsG0280011059.01.T01 AT1G21720 28.966 145 91 2 9 151 2 136 4.22e-13 65.1

Find 48 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTACAAGTGAGAGATTT+TGG 0.149319 2:-78973495 None:intergenic
CGCGGTGGTTCTGGGTGGTT+AGG 0.196824 2:-78972056 None:intergenic
GATTCGGAACGCGGTGGTTC+TGG 0.199934 2:-78972065 None:intergenic
TGTTGTTTAGTCATGGTAAA+TGG 0.280507 2:-78973224 None:intergenic
TGACTAAACAACACGCTAAT+TGG 0.296923 2:+78973234 MsG0280011059.01.T01:CDS
AAATGTGTGATGGCTTCTTC+TGG 0.302083 2:+78974408 MsG0280011059.01.T01:CDS
ACCGCGTTCCGAATCGTTTC+CGG 0.329036 2:+78972073 MsG0280011059.01.T01:five_prime_UTR
TACTATTCTTTCAATGTGTT+GGG 0.329503 2:+78975923 MsG0280011059.01.T01:CDS
TTACTATTCTTTCAATGTGT+TGG 0.338506 2:+78975922 MsG0280011059.01.T01:CDS
TACCCTCCATTGTTGTCATA+TGG 0.350595 2:-78973260 None:intergenic
AGATCTTGTGTCGCAATTGC+TGG 0.365009 2:+78973401 MsG0280011059.01.T01:intron
ATTCGGAACGCGGTGGTTCT+GGG 0.373901 2:-78972064 None:intergenic
GAAAGCAATTGAGCCATTGC+AGG 0.407579 2:-78975869 None:intergenic
TGACTGTCGACTGCCTGGTT+TGG 0.414826 2:+78977245 MsG0280011059.01.T01:CDS
GCGGTGGTTCTGGGTGGTTA+GGG 0.446573 2:-78972055 None:intergenic
TTGTGTCGCAATTGCTGGAT+CGG 0.468844 2:+78973406 MsG0280011059.01.T01:CDS
TGAAGCAGAAGCAGTTGATC+TGG 0.483304 2:+78976298 MsG0280011059.01.T01:CDS
TGTGGTGGCCGGAAACGATT+CGG 0.484429 2:-78972081 None:intergenic
TATGTTGACTGTCGACTGCC+TGG 0.485839 2:+78977240 MsG0280011059.01.T01:CDS
ACGAGTGAGGATGTTGTAAC+CGG 0.515362 2:-78973465 None:intergenic
TCACCACGGCGGAGAAAGCT+AGG 0.516976 2:-78972106 None:intergenic
GCAGATGAGCTGCCCTGCAA+TGG 0.526195 2:+78975856 MsG0280011059.01.T01:CDS
TTTGCATAGCCGTCCAAACC+AGG 0.526590 2:-78977258 None:intergenic
AACACATTGAAAGAATAGTA+AGG 0.535290 2:-78975920 None:intergenic
AAAGCTAGGACTGTGGTGGC+CGG 0.548914 2:-78972092 None:intergenic
TGATGTGAAGGCTTTGCAGA+AGG 0.566876 2:+78974440 MsG0280011059.01.T01:CDS
TGTCGACTGCCTGGTTTGGA+CGG 0.571026 2:+78977249 MsG0280011059.01.T01:CDS
ATTAGCGTGTTGTTTAGTCA+TGG 0.578211 2:-78973231 None:intergenic
CTCCATATGACAACAATGGA+GGG 0.584655 2:+78973258 MsG0280011059.01.T01:CDS
GTGTGATCGCAGCTGATACA+AGG 0.586277 2:+78973435 MsG0280011059.01.T01:CDS
TATTCTTTCAATGTGTTGGG+CGG 0.587319 2:+78975926 MsG0280011059.01.T01:CDS
ACTGCTTCTGCTTCAGACAG+TGG 0.591728 2:-78976290 None:intergenic
GGCGGAGAAAGCTAGGACTG+TGG 0.593409 2:-78972099 None:intergenic
GCCGGAAACGATTCGGAACG+CGG 0.600119 2:-78972074 None:intergenic
AAAGCAATTGAGCCATTGCA+GGG 0.602125 2:-78975868 None:intergenic
TTGGACGGCTATGCAAAACT+AGG 0.612742 2:+78977264 MsG0280011059.01.T01:CDS
ATAGCTCACCTTCACTGTCA+AGG 0.612785 2:-78975949 None:intergenic
TCTCCATATGACAACAATGG+AGG 0.635572 2:+78973257 MsG0280011059.01.T01:CDS
AGTCCTAGCTTTCTCCGCCG+TGG 0.638758 2:+78972103 MsG0280011059.01.T01:five_prime_UTR
AGTGAGGATGTTGTAACCGG+TGG 0.639435 2:-78973462 None:intergenic
TGGTCTCCATATGACAACAA+TGG 0.646174 2:+78973254 MsG0280011059.01.T01:CDS
GCTGATACAAGGATGTCCAC+CGG 0.646826 2:+78973446 MsG0280011059.01.T01:CDS
GGAGAAAGCTAGGACTGTGG+TGG 0.648088 2:-78972096 None:intergenic
TTGGGCGGCCTTGACAGTGA+AGG 0.657648 2:+78975941 MsG0280011059.01.T01:CDS
CAGAGCTGAGAAATGTGTGA+TGG 0.663843 2:+78974398 MsG0280011059.01.T01:CDS
CGGAACGCGGTGGTTCTGGG+TGG 0.664203 2:-78972061 None:intergenic
GGAAACGATTCGGAACGCGG+TGG 0.738869 2:-78972071 None:intergenic
GAATGAAAGTCTCACCACGG+CGG 0.776825 2:-78972117 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+CGG - Chr2:78973784-78973803 None:intergenic 0.0%
!! AAAAAAAAAAAAAAAAAACG+GGG - Chr2:78973782-78973801 None:intergenic 10.0%
!! AATTGAAAAATATTAAACAA+GGG - Chr2:78973355-78973374 None:intergenic 10.0%
!! CATTATATAACAAAATATTT+AGG - Chr2:78976957-78976976 None:intergenic 10.0%
!! TAATTGAAAAATATTAAACA+AGG - Chr2:78973356-78973375 None:intergenic 10.0%
!!! AATAACTTTTATATAGAAAA+TGG - Chr2:78975419-78975438 None:intergenic 10.0%
!! AAAAAAAAAAAAAAAAACGG+GGG - Chr2:78973781-78973800 None:intergenic 15.0%
!! AGAATTAATTAATCGATAAA+AGG - Chr2:78973941-78973960 None:intergenic 15.0%
!! ATTGAAAAATATTAAACAAG+GGG - Chr2:78973354-78973373 None:intergenic 15.0%
!! TATGCAAAACAAATAAAATT+AGG - Chr2:78975474-78975493 None:intergenic 15.0%
!! TTATTTATTTATCTGTTACA+AGG - Chr2:78974506-78974525 None:intergenic 15.0%
!! TTCAGCAATATATATATATA+GGG - Chr2:78974228-78974247 None:intergenic 15.0%
!! TTTCAGCAATATATATATAT+AGG - Chr2:78974229-78974248 None:intergenic 15.0%
!!! ATAATCATATTTTAATGTAG+AGG - Chr2:78976254-78976273 None:intergenic 15.0%
!!! TATATATATATAGTTTGTGT+TGG - Chr2:78973529-78973548 None:intergenic 15.0%
!!! TTATCATTTCTTTACAATTT+TGG - Chr2:78975560-78975579 None:intergenic 15.0%
!! AAAAATAGTCCAATAAGTAT+AGG - Chr2:78975339-78975358 None:intergenic 20.0%
!! AAAATAAATATAGAGGTGAA+TGG - Chr2:78975279-78975298 None:intergenic 20.0%
!! AAACGTAAAACCTAATTATT+TGG - Chr2:78973752-78973771 None:intergenic 20.0%
!! AAATCTAATCTGGTAATTAA+TGG + Chr2:78974038-78974057 MsG0280011059.01.T01:intron 20.0%
!! AAGGAAATAATTAAATCTGA+TGG + Chr2:78974146-78974165 MsG0280011059.01.T01:intron 20.0%
!! ACAATAATAGAAAACCAATT+GGG - Chr2:78974252-78974271 None:intergenic 20.0%
!! ACTTGAATAAAGTTAAGAAA+TGG - Chr2:78976911-78976930 None:intergenic 20.0%
!! ATAAACACAACTAAAAAAAG+AGG - Chr2:78974323-78974342 None:intergenic 20.0%
!! ATTATTGTAAAACTTCTAGT+GGG + Chr2:78974264-78974283 MsG0280011059.01.T01:intron 20.0%
!! CAAAATGACAATTATGTAAA+AGG - Chr2:78976576-78976595 None:intergenic 20.0%
!! CATATCCAGATAAAAATATA+GGG - Chr2:78972793-78972812 None:intergenic 20.0%
!! CATTAAAATATGATTATTGC+AGG + Chr2:78976257-78976276 MsG0280011059.01.T01:intron 20.0%
!! GAACATCAAAATAAATATAG+AGG - Chr2:78975286-78975305 None:intergenic 20.0%
!! TACAATAATAGAAAACCAAT+TGG - Chr2:78974253-78974272 None:intergenic 20.0%
!! TAGTTAGTTACATAGTTATT+TGG + Chr2:78975017-78975036 MsG0280011059.01.T01:intron 20.0%
!! TATAAATTAGAGAACACAAA+GGG + Chr2:78975059-78975078 MsG0280011059.01.T01:intron 20.0%
!! TATAGAAACATTAGAAAAGA+GGG - Chr2:78975367-78975386 None:intergenic 20.0%
!! TATTATTGTAAAACTTCTAG+TGG + Chr2:78974263-78974282 MsG0280011059.01.T01:intron 20.0%
!! TCATATCCAGATAAAAATAT+AGG - Chr2:78972794-78972813 None:intergenic 20.0%
!! TGTCAAAAGAATTCAAATTA+AGG - Chr2:78977203-78977222 None:intergenic 20.0%
!! TTAAGAAAATAAGAAAGACT+AGG - Chr2:78975172-78975191 None:intergenic 20.0%
!! TTATAGAAACATTAGAAAAG+AGG - Chr2:78975368-78975387 None:intergenic 20.0%
!! TTCAGTTGTAGTTATATTTA+TGG + Chr2:78972992-78973011 MsG0280011059.01.T01:intron 20.0%
!! TTGAAAAATATTAAACAAGG+GGG - Chr2:78973353-78973372 None:intergenic 20.0%
!! TTTAGATTGTAAACATATTC+AGG + Chr2:78974531-78974550 MsG0280011059.01.T01:intron 20.0%
!! TTTGGATATACAATTATACT+TGG - Chr2:78975542-78975561 None:intergenic 20.0%
!!! AAAGAATTCTGATTTGTATT+TGG + Chr2:78972948-78972967 MsG0280011059.01.T01:intron 20.0%
!!! AATTTGAAATTGGTGAAATT+GGG + Chr2:78975699-78975718 MsG0280011059.01.T01:intron 20.0%
!!! ACAATTTTATGCATGATAAT+TGG - Chr2:78973910-78973929 None:intergenic 20.0%
!!! AGTTTGTTTATGTATGAAAA+CGG + Chr2:78976367-78976386 MsG0280011059.01.T01:intron 20.0%
!!! ATTGGTTTTGAATTAGATTT+AGG + Chr2:78972286-78972305 MsG0280011059.01.T01:intron 20.0%
!!! GTTAGATGTTAATTTGAAAT+TGG + Chr2:78975689-78975708 MsG0280011059.01.T01:intron 20.0%
!!! TAATTTGAAATTGGTGAAAT+TGG + Chr2:78975698-78975717 MsG0280011059.01.T01:intron 20.0%
!!! TATTTATGGTTTGTGATAAT+TGG + Chr2:78973006-78973025 MsG0280011059.01.T01:intron 20.0%
!!! TCTTTGATTTTTTGTTGATT+TGG + Chr2:78972852-78972871 MsG0280011059.01.T01:intron 20.0%
!!! TGATGATGATATTCAAATTT+TGG + Chr2:78972640-78972659 MsG0280011059.01.T01:intron 20.0%
!!! TGATTTTGTATATCAATACA+CGG + Chr2:78974115-78974134 MsG0280011059.01.T01:intron 20.0%
!!! TTGTTTCTCATATAAGATAT+TGG + Chr2:78974185-78974204 MsG0280011059.01.T01:intron 20.0%
! AAAATAATGCCTATTTGGAT+TGG - Chr2:78972515-78972534 None:intergenic 25.0%
! AAACCAATAATCAAACATCA+AGG - Chr2:78972274-78972293 None:intergenic 25.0%
! AACACATTGAAAGAATAGTA+AGG - Chr2:78975923-78975942 None:intergenic 25.0%
! AATATCGTAAAGTTTGTGAA+TGG + Chr2:78975098-78975117 MsG0280011059.01.T01:intron 25.0%
! AATTGGAACGATTATCAATT+TGG - Chr2:78973893-78973912 None:intergenic 25.0%
! ACTTAACTTCAGTTTATCTT+TGG - Chr2:78972380-78972399 None:intergenic 25.0%
! AGTATAAACTTCTATAAAGG+TGG - Chr2:78975451-78975470 None:intergenic 25.0%
! AGTTATGTTAACAAATAGAG+AGG - Chr2:78974725-78974744 None:intergenic 25.0%
! ATAGAAACATTAGAAAAGAG+GGG - Chr2:78975366-78975385 None:intergenic 25.0%
! ATCTAACAACGTAATTGATA+AGG - Chr2:78975676-78975695 None:intergenic 25.0%
! ATTCCTTGATGTTTGATTAT+TGG + Chr2:78972268-78972287 MsG0280011059.01.T01:intron 25.0%
! ATTGTAAAGAAATGATAAGC+AGG + Chr2:78975562-78975581 MsG0280011059.01.T01:intron 25.0%
! CAACAAAAATAATGCCTATT+TGG - Chr2:78972520-78972539 None:intergenic 25.0%
! CCATGTGATTTAATATTTAG+AGG + Chr2:78977117-78977136 MsG0280011059.01.T01:intron 25.0%
! CCTCTAAATATTAAATCACA+TGG - Chr2:78977120-78977139 None:intergenic 25.0%
! CGTGTCTAAAAAATTTCTAA+GGG + Chr2:78977073-78977092 MsG0280011059.01.T01:intron 25.0%
! GACAACAAAATTTACAAACA+CGG - Chr2:78972578-78972597 None:intergenic 25.0%
! GTATAAACTTCTATAAAGGT+GGG - Chr2:78975450-78975469 None:intergenic 25.0%
! GTATAAATTAGAGAACACAA+AGG + Chr2:78975058-78975077 MsG0280011059.01.T01:intron 25.0%
! TAAAAATTGAGCTACAATCT+TGG - Chr2:78974090-78974109 None:intergenic 25.0%
! TAAACACTAAAGTCAAAATG+TGG - Chr2:78976450-78976469 None:intergenic 25.0%
! TAACAAATAGAGAGGTTAAA+AGG - Chr2:78974717-78974736 None:intergenic 25.0%
! TACTATTCTTTCAATGTGTT+GGG + Chr2:78975923-78975942 MsG0280011059.01.T01:CDS 25.0%
! TCTCGTTCTCATATAAATAT+TGG - Chr2:78973590-78973609 None:intergenic 25.0%
! TGAAAAATATTAAACAAGGG+GGG - Chr2:78973352-78973371 None:intergenic 25.0%
! TTACTATTCTTTCAATGTGT+TGG + Chr2:78975922-78975941 MsG0280011059.01.T01:CDS 25.0%
! TTATTGTAAAACTTCTAGTG+GGG + Chr2:78974265-78974284 MsG0280011059.01.T01:intron 25.0%
!! AAGATTGAGAAATTTTCTAG+CGG - Chr2:78973859-78973878 None:intergenic 25.0%
!! AGGAGTATAAACTTCTATAA+AGG - Chr2:78975454-78975473 None:intergenic 25.0%
!! CAATTACACAGTATGTTTTA+AGG - Chr2:78973662-78973681 None:intergenic 25.0%
!! GAAGCTTTAATTATTTGTCA+CGG - Chr2:78975780-78975799 None:intergenic 25.0%
!! TTTTACTTCTGTATTTGCAT+CGG + Chr2:78976878-78976897 MsG0280011059.01.T01:intron 25.0%
!!! ATCTTTTGGTTTTTTTCTCA+TGG + Chr2:78972724-78972743 MsG0280011059.01.T01:intron 25.0%
!!! ATGATGTAGTTATTTTTGTG+TGG + Chr2:78972761-78972780 MsG0280011059.01.T01:intron 25.0%
!!! CATAATTGTCATTTTGCATT+AGG + Chr2:78976580-78976599 MsG0280011059.01.T01:intron 25.0%
!!! GTGTTTTTCTTGAAGTATTT+TGG + Chr2:78976203-78976222 MsG0280011059.01.T01:intron 25.0%
!!! GTTAAATGTTGCTTTGATTT+GGG + Chr2:78974787-78974806 MsG0280011059.01.T01:intron 25.0%
AAAAATATTAAACAAGGGGG+GGG - Chr2:78973350-78973369 None:intergenic 30.0%
AAACCATCCTGTATATCATT+TGG + Chr2:78973077-78973096 MsG0280011059.01.T01:intron 30.0%
AAACTACCCAAATGATATAC+AGG - Chr2:78973087-78973106 None:intergenic 30.0%
AAATGATATACAGGATGGTT+TGG - Chr2:78973078-78973097 None:intergenic 30.0%
AACCATCCTGTATATCATTT+GGG + Chr2:78973078-78973097 MsG0280011059.01.T01:intron 30.0%
AACCTAATTATTTGGAGAAG+AGG - Chr2:78973744-78973763 None:intergenic 30.0%
AACTTCAACCAAATAGGAAA+GGG + Chr2:78976028-78976047 MsG0280011059.01.T01:intron 30.0%
AAGATCGTGGACATATTTAA+AGG - Chr2:78975394-78975413 None:intergenic 30.0%
ACAAACAGAACAAAAACACA+AGG - Chr2:78974603-78974622 None:intergenic 30.0%
AGAACGAGAACTATCTATAT+CGG + Chr2:78973601-78973620 MsG0280011059.01.T01:intron 30.0%
AGAATAGTGTAATGAAGATG+AGG - Chr2:78973169-78973188 None:intergenic 30.0%
AGAGCAAGCAAATACAAAAA+TGG - Chr2:78976002-78976021 None:intergenic 30.0%
ATAGACCACATTCAGAATTT+AGG - Chr2:78976777-78976796 None:intergenic 30.0%
ATATATTGCTGAAACCCAAT+TGG + Chr2:78974235-78974254 MsG0280011059.01.T01:intron 30.0%
ATCCAGATAAAAATATAGGG+AGG - Chr2:78972790-78972809 None:intergenic 30.0%
ATTCTATATACCGAGAAAAG+AGG - Chr2:78974914-78974933 None:intergenic 30.0%
CACGGTAATATTCAAAACAA+TGG - Chr2:78975762-78975781 None:intergenic 30.0%
GAAAAATATTAAACAAGGGG+GGG - Chr2:78973351-78973370 None:intergenic 30.0%
GAATAGTGTAATGAAGATGA+GGG - Chr2:78973168-78973187 None:intergenic 30.0%
GCGTGTCTAAAAAATTTCTA+AGG + Chr2:78977072-78977091 MsG0280011059.01.T01:intron 30.0%
GTAAACATATTCAGGAAACA+GGG + Chr2:78974539-78974558 MsG0280011059.01.T01:intron 30.0%
GTAACACATTATGTCATGAT+GGG - Chr2:78974959-78974978 None:intergenic 30.0%
GTCCAATAAGTATAGGTAAA+AGG - Chr2:78975332-78975351 None:intergenic 30.0%
TAACAAATGAGCTACAATCT+TGG + Chr2:78973700-78973719 MsG0280011059.01.T01:intron 30.0%
TACATGACATGCATTATGTT+AGG - Chr2:78975232-78975251 None:intergenic 30.0%
TATTCAAAACAATGGAAGCA+TGG - Chr2:78975754-78975773 None:intergenic 30.0%
TCAAATAAGCCAATCCAAAT+AGG + Chr2:78972503-78972522 MsG0280011059.01.T01:intron 30.0%
TCCAGATAAAAATATAGGGA+GGG - Chr2:78972789-78972808 None:intergenic 30.0%
TCTTCCAATATGAATACTTG+TGG + Chr2:78972599-78972618 MsG0280011059.01.T01:intron 30.0%
TGTAAACATATTCAGGAAAC+AGG + Chr2:78974538-78974557 MsG0280011059.01.T01:intron 30.0%
TGTATATCATTTGGGTAGTT+TGG + Chr2:78973086-78973105 MsG0280011059.01.T01:intron 30.0%
TTAAGCTATTCATCCAAACA+AGG - Chr2:78972312-78972331 None:intergenic 30.0%
TTCAGTTGGTTATCAAGAAA+CGG - Chr2:78976135-78976154 None:intergenic 30.0%
TTCCTCTTCTCCAAATAATT+AGG + Chr2:78973739-78973758 MsG0280011059.01.T01:intron 30.0%
TTTGTATTTGGATGCTAAGT+TGG + Chr2:78972960-78972979 MsG0280011059.01.T01:intron 30.0%
! AAAGGTTTGAGATTTGGAAA+TGG + Chr2:78973984-78974003 MsG0280011059.01.T01:intron 30.0%
! AGAAAGCGTAAAATCTAATC+TGG + Chr2:78974028-78974047 MsG0280011059.01.T01:intron 30.0%
! ATATATATAGGGAGCATATC+CGG + Chr2:78973559-78973578 MsG0280011059.01.T01:intron 30.0%
! ATGTCATGTATTGAGTTGTA+AGG + Chr2:78975242-78975261 MsG0280011059.01.T01:intron 30.0%
! ATTTTTCCAGAGCTCTATAT+TGG - Chr2:78973034-78973053 None:intergenic 30.0%
! CTCCTTTTACCTATACTTAT+TGG + Chr2:78975327-78975346 MsG0280011059.01.T01:intron 30.0%
! GATATTCAAATTTTGGACGA+GGG + Chr2:78972647-78972666 MsG0280011059.01.T01:intron 30.0%
! TCAATACACGGTATGTTTTA+AGG + Chr2:78974127-78974146 MsG0280011059.01.T01:intron 30.0%
! TCACTATGTTGATTACTTGT+TGG + Chr2:78974628-78974647 MsG0280011059.01.T01:intron 30.0%
! TGATATTCAAATTTTGGACG+AGG + Chr2:78972646-78972665 MsG0280011059.01.T01:intron 30.0%
! TGTTGTTTAGTCATGGTAAA+TGG - Chr2:78973227-78973246 None:intergenic 30.0%
! TTGATTACTTGTTGGAAAGT+TGG + Chr2:78974636-78974655 MsG0280011059.01.T01:intron 30.0%
!! AATTAGATTTAGGCCTTGTT+TGG + Chr2:78972296-78972315 MsG0280011059.01.T01:intron 30.0%
!! ACAAGCTTTAAACTTGCTTT+GGG + Chr2:78976603-78976622 MsG0280011059.01.T01:intron 30.0%
!! ATTTAGAGGAAGTGTTGAAA+AGG + Chr2:78977131-78977150 MsG0280011059.01.T01:intron 30.0%
!! CATATAAATATTGGTTCTCC+CGG - Chr2:78973581-78973600 None:intergenic 30.0%
!! GGCTTATTTGAGATTTTTAC+TGG - Chr2:78972494-78972513 None:intergenic 30.0%
!! GGTTAAATGTTGCTTTGATT+TGG + Chr2:78974786-78974805 MsG0280011059.01.T01:intron 30.0%
!! TTCTGCACTAGTATTTTTGT+TGG + Chr2:78975303-78975322 MsG0280011059.01.T01:intron 30.0%
!! TTTGGGTGTATGTTTTTACA+GGG + Chr2:78976620-78976639 MsG0280011059.01.T01:intron 30.0%
!!! GTATTTTGACTTTGCAAAAC+AGG - Chr2:78976476-78976495 None:intergenic 30.0%
!!! TTTTGTTGCTGTTTGTTTGT+TGG + Chr2:78972532-78972551 MsG0280011059.01.T01:intron 30.0%
AAAAGATGCCAGTCTAAACT+AGG + Chr2:78974349-78974368 MsG0280011059.01.T01:intron 35.0%
AAAGCAACATTTAACCCTAG+AGG - Chr2:78974782-78974801 None:intergenic 35.0%
AAGAAATGATAAGCAGGATG+AGG + Chr2:78975568-78975587 MsG0280011059.01.T01:intron 35.0%
AATCACATGGATTCACCATT+TGG - Chr2:78977107-78977126 None:intergenic 35.0%
AGAAAGATCGAAATTCACTC+AGG - Chr2:78972170-78972189 None:intergenic 35.0%
AGAAATGATAAGCAGGATGA+GGG + Chr2:78975569-78975588 MsG0280011059.01.T01:intron 35.0%
AGACTAGAAATAGCGCAAAT+TGG - Chr2:78976834-78976853 None:intergenic 35.0%
AGCACCACAAGTATTCATAT+TGG - Chr2:78972606-78972625 None:intergenic 35.0%
AGTGTGAGTAATATGCAATC+AGG + Chr2:78977010-78977029 MsG0280011059.01.T01:intron 35.0%
ATAGAAAATGGCAAAGATCG+TGG - Chr2:78975407-78975426 None:intergenic 35.0%
ATAGAATGAAAGTCTCACCA+CGG - Chr2:78972123-78972142 None:intergenic 35.0%
ATCACATGGATTCACCATTT+GGG - Chr2:78977106-78977125 None:intergenic 35.0%
ATTTCGACTGCAGAAAATTG+TGG + Chr2:78976549-78976568 MsG0280011059.01.T01:intron 35.0%
CAACTTCAACCAAATAGGAA+AGG + Chr2:78976027-78976046 MsG0280011059.01.T01:intron 35.0%
CACATTCATACTTGCAGAAT+TGG + Chr2:78976404-78976423 MsG0280011059.01.T01:intron 35.0%
CGTAACACATTATGTCATGA+TGG - Chr2:78974960-78974979 None:intergenic 35.0%
CTTTCTTGAAAGAGAGCAAA+AGG - Chr2:78973827-78973846 None:intergenic 35.0%
GAAAAAATGTCCAGGACAAT+TGG - Chr2:78977043-78977062 None:intergenic 35.0%
GAAATTGTCATCCTAAATGC+TGG + Chr2:78976653-78976672 MsG0280011059.01.T01:intron 35.0%
GACTTCAACTTCAACCAAAT+AGG + Chr2:78976022-78976041 MsG0280011059.01.T01:intron 35.0%
TACCCAAATGATATACAGGA+TGG - Chr2:78973083-78973102 None:intergenic 35.0%
TATTCTTTCAATGTGTTGGG+CGG + Chr2:78975926-78975945 MsG0280011059.01.T01:CDS 35.0%
TGACTAAACAACACGCTAAT+TGG + Chr2:78973234-78973253 MsG0280011059.01.T01:CDS 35.0%
TGGTTTATTATAGACTGCCA+TGG + Chr2:78974878-78974897 MsG0280011059.01.T01:intron 35.0%
TTAGTCATGGTAAATGGAAC+TGG - Chr2:78973221-78973240 None:intergenic 35.0%
TTCTATTCCATTCAGCTCTT+GGG + Chr2:78975204-78975223 MsG0280011059.01.T01:intron 35.0%
TTTACTGGTATAAGCACTTC+AGG - Chr2:78972479-78972498 None:intergenic 35.0%
TTTCTATTCCATTCAGCTCT+TGG + Chr2:78975203-78975222 MsG0280011059.01.T01:intron 35.0%
! AAAGACTGATGCTTTTACAG+AGG + Chr2:78976706-78976725 MsG0280011059.01.T01:intron 35.0%
! AAGCTAGAGTTGGTTTCATT+TGG - Chr2:78976984-78977003 None:intergenic 35.0%
! AATGAAGATGAGGGTATACA+AGG - Chr2:78973159-78973178 None:intergenic 35.0%
! AGCGTTTTCATAAGCTATCT+TGG + Chr2:78972418-78972437 MsG0280011059.01.T01:intron 35.0%
! AGCTTACAAGTGAGAGATTT+TGG - Chr2:78973498-78973517 None:intergenic 35.0%
! ATACCGAGAAAAGAGGTTTT+CGG - Chr2:78974907-78974926 None:intergenic 35.0%
! ATGAAGATGAGGGTATACAA+GGG - Chr2:78973158-78973177 None:intergenic 35.0%
! GAACGATTATCAATTTGGTG+AGG - Chr2:78973888-78973907 None:intergenic 35.0%
! TAACCGAAAACCTCTTTTCT+CGG + Chr2:78974901-78974920 MsG0280011059.01.T01:intron 35.0%
! TATATATAGGGAGCATATCC+GGG + Chr2:78973560-78973579 MsG0280011059.01.T01:intron 35.0%
! TGAGGAAAAGGTTTGAGATT+TGG + Chr2:78973978-78973997 MsG0280011059.01.T01:intron 35.0%
!! AAAAGCATCAGTCTTTCCTT+AGG - Chr2:78976702-78976721 None:intergenic 35.0%
!! AGACTTGTTCTGAGAATGTT+TGG + Chr2:78976745-78976764 MsG0280011059.01.T01:intron 35.0%
!! ATAACTGAGAGTATTCCTCT+AGG + Chr2:78974764-78974783 MsG0280011059.01.T01:intron 35.0%
!! ATATACAGGATGGTTTGGTT+CGG - Chr2:78973073-78973092 None:intergenic 35.0%
!! ATTAGCGTGTTGTTTAGTCA+TGG - Chr2:78973234-78973253 None:intergenic 35.0%
!! CTTTGGGTGTATGTTTTTAC+AGG + Chr2:78976619-78976638 MsG0280011059.01.T01:intron 35.0%
!! GACAAGCTTTAAACTTGCTT+TGG + Chr2:78976602-78976621 MsG0280011059.01.T01:intron 35.0%
!! TAACTGAGAGTATTCCTCTA+GGG + Chr2:78974765-78974784 MsG0280011059.01.T01:intron 35.0%
!! TACTTGCTGATTTGAGGAAA+AGG + Chr2:78973966-78973985 MsG0280011059.01.T01:intron 35.0%
!! TAGTGTTACTTGCTGATTTG+AGG + Chr2:78973960-78973979 MsG0280011059.01.T01:intron 35.0%
!! TATGTTTTTACAGGGGGATA+AGG + Chr2:78976628-78976647 MsG0280011059.01.T01:intron 35.0%
!! TCCCTCCCTATATTTTTATC+TGG + Chr2:78972785-78972804 MsG0280011059.01.T01:intron 35.0%
!! TTGGGTGTATGTTTTTACAG+GGG + Chr2:78976621-78976640 MsG0280011059.01.T01:intron 35.0%
!!! AGTTCATTGCCTCTGTTTTT+TGG + Chr2:78972903-78972922 MsG0280011059.01.T01:intron 35.0%
!!! TTGGTTTTTTTCTCATGGCT+TGG + Chr2:78972729-78972748 MsG0280011059.01.T01:intron 35.0%
AAAGCAATTGAGCCATTGCA+GGG - Chr2:78975871-78975890 None:intergenic 40.0%
AAATGTGTGATGGCTTCTTC+TGG + Chr2:78974408-78974427 MsG0280011059.01.T01:CDS 40.0%
AACATATTCAGGAAACAGGG+TGG + Chr2:78974542-78974561 MsG0280011059.01.T01:intron 40.0%
AAGAAACGGCATAATGAGAG+TGG - Chr2:78976121-78976140 None:intergenic 40.0%
AAGTAGCTAGGTTTCTTGGT+GGG + Chr2:78972690-78972709 MsG0280011059.01.T01:intron 40.0%
ACAAGCCGTCCTATTAAGAT+CGG + Chr2:78976494-78976513 MsG0280011059.01.T01:intron 40.0%
ACCAATTCAAGAACTTCACC+TGG - Chr2:78976185-78976204 None:intergenic 40.0%
AGACACATCCCTTTCCTATT+TGG - Chr2:78976039-78976058 None:intergenic 40.0%
AGCACTTCACCAAAAAACAG+AGG - Chr2:78972915-78972934 None:intergenic 40.0%
AGTAGCAACTCTAATGCGAA+GGG + Chr2:78975121-78975140 MsG0280011059.01.T01:intron 40.0%
CCAATTCAAGAACTTCACCT+GGG - Chr2:78976184-78976203 None:intergenic 40.0%
CGATGAATACACCAGCATTT+AGG - Chr2:78976667-78976686 None:intergenic 40.0%
CTCCATATGACAACAATGGA+GGG + Chr2:78973258-78973277 MsG0280011059.01.T01:CDS 40.0%
CTGCAAGTATGAATGTGTGA+AGG - Chr2:78976401-78976420 None:intergenic 40.0%
GAAATGATAAGCAGGATGAG+GGG + Chr2:78975570-78975589 MsG0280011059.01.T01:intron 40.0%
GAACTTAGCAACTCAAGCAA+TGG - Chr2:78972888-78972907 None:intergenic 40.0%
GATGAGGGGAAAGTAAAAAC+TGG + Chr2:78975584-78975603 MsG0280011059.01.T01:intron 40.0%
GTCTTCACTTATGATGCTGT+TGG + Chr2:78976055-78976074 MsG0280011059.01.T01:intron 40.0%
GTGCTCCTAAATTCTGAATG+TGG + Chr2:78976769-78976788 MsG0280011059.01.T01:intron 40.0%
GTGTATTCATCGTGAGTTCA+TGG + Chr2:78976675-78976694 MsG0280011059.01.T01:intron 40.0%
TACCCTCCATTGTTGTCATA+TGG - Chr2:78973263-78973282 None:intergenic 40.0%
TCTCCATATGACAACAATGG+AGG + Chr2:78973257-78973276 MsG0280011059.01.T01:CDS 40.0%
TGGTCTCCATATGACAACAA+TGG + Chr2:78973254-78973273 MsG0280011059.01.T01:CDS 40.0%
TTTCAACCGCCGATCTTAAT+AGG - Chr2:78976506-78976525 None:intergenic 40.0%
! AAAGAGGTTTTCGGTTACCA+TGG - Chr2:78974898-78974917 None:intergenic 40.0%
! ATTCAAATTTTGGACGAGGG+TGG + Chr2:78972650-78972669 MsG0280011059.01.T01:intron 40.0%
! CAAAACAATGGAAGCATGGA+AGG - Chr2:78975750-78975769 None:intergenic 40.0%
! CCAGTCTAAACTAGGTTTTG+GGG + Chr2:78974357-78974376 MsG0280011059.01.T01:intron 40.0%
! GCCAGTCTAAACTAGGTTTT+GGG + Chr2:78974356-78974375 MsG0280011059.01.T01:intron 40.0%
! GGGGTGGGAATTTTATCTTT+TGG + Chr2:78972710-78972729 MsG0280011059.01.T01:intron 40.0%
! TAGCGTTGGAAAAAATGTCC+AGG - Chr2:78977051-78977070 None:intergenic 40.0%
! TGCCAGTCTAAACTAGGTTT+TGG + Chr2:78974355-78974374 MsG0280011059.01.T01:intron 40.0%
! TTCAAATTTTGGACGAGGGT+GGG + Chr2:78972651-78972670 MsG0280011059.01.T01:intron 40.0%
! TTTTTAGACACGCATAGCGT+TGG - Chr2:78977065-78977084 None:intergenic 40.0%
!! AAAGCAGTGTTGAGCATTGA+TGG + Chr2:78974858-78974877 MsG0280011059.01.T01:intron 40.0%
!! TGGGTGTATGTTTTTACAGG+GGG + Chr2:78976622-78976641 MsG0280011059.01.T01:intron 40.0%
!! TGGTTTTCAAGCTGATGTGA+AGG + Chr2:78974428-78974447 MsG0280011059.01.T01:CDS 40.0%
!! TTGGAAAGCATTCCTCGATT+TGG - Chr2:78976815-78976834 None:intergenic 40.0%
!! TTTTCTCATGGCTTGGATGT+TGG + Chr2:78972736-78972755 MsG0280011059.01.T01:intron 40.0%
!!! TTTTGGAGTAATCACGAGTG+AGG - Chr2:78973481-78973500 None:intergenic 40.0%
AACCGCCGATCTTAATAGGA+CGG - Chr2:78976502-78976521 None:intergenic 45.0%
AATCTCGTGACTGTGAATGC+AGG + Chr2:78976524-78976543 MsG0280011059.01.T01:intron 45.0%
ACGAGTGAGGATGTTGTAAC+CGG - Chr2:78973468-78973487 None:intergenic 45.0%
AGATCTTGTGTCGCAATTGC+TGG + Chr2:78973401-78973420 MsG0280011059.01.T01:intron 45.0%
AGTAGCTAGGTTTCTTGGTG+GGG + Chr2:78972691-78972710 MsG0280011059.01.T01:intron 45.0%
ATAGCTCACCTTCACTGTCA+AGG - Chr2:78975952-78975971 None:intergenic 45.0%
ATCGTGAGTTCATGGACCTA+AGG + Chr2:78976683-78976702 MsG0280011059.01.T01:intron 45.0%
ATCTCGTGACTGTGAATGCA+GGG + Chr2:78976525-78976544 MsG0280011059.01.T01:intron 45.0%
ATGCTGTTGGTCCTATGAGA+GGG + Chr2:78976068-78976087 MsG0280011059.01.T01:intron 45.0%
CACTACTGCAAAGCTAGAGT+TGG - Chr2:78976994-78977013 None:intergenic 45.0%
CAGAGCTGAGAAATGTGTGA+TGG + Chr2:78974398-78974417 MsG0280011059.01.T01:CDS 45.0%
CCCAGGTGAAGTTCTTGAAT+TGG + Chr2:78976181-78976200 MsG0280011059.01.T01:intron 45.0%
CCCCAAAACCTAGTTTAGAC+TGG - Chr2:78974360-78974379 None:intergenic 45.0%
GAAAGCAATTGAGCCATTGC+AGG - Chr2:78975872-78975891 None:intergenic 45.0%
GAAGTAGCTAGGTTTCTTGG+TGG + Chr2:78972689-78972708 MsG0280011059.01.T01:intron 45.0%
GAGTAGCAACTCTAATGCGA+AGG + Chr2:78975120-78975139 MsG0280011059.01.T01:intron 45.0%
GGATATAGCTCTCAGGTTTC+TGG + Chr2:78976093-78976112 MsG0280011059.01.T01:intron 45.0%
GTAGCAACTCTAATGCGAAG+GGG + Chr2:78975122-78975141 MsG0280011059.01.T01:intron 45.0%
TAATGCGAAGGGGAAACTCT+TGG + Chr2:78975132-78975151 MsG0280011059.01.T01:intron 45.0%
TGAAGCAGAAGCAGTTGATC+TGG + Chr2:78976298-78976317 MsG0280011059.01.T01:CDS 45.0%
TGATGTGAAGGCTTTGCAGA+AGG + Chr2:78974440-78974459 MsG0280011059.01.T01:CDS 45.0%
TTAGGAACCCAAGAGCTGAA+TGG - Chr2:78975214-78975233 None:intergenic 45.0%
TTGGACGGCTATGCAAAACT+AGG + Chr2:78977264-78977283 MsG0280011059.01.T01:CDS 45.0%
TTGGAGCCAATATAGAGCTC+TGG + Chr2:78973025-78973044 MsG0280011059.01.T01:intron 45.0%
TTGTGTCGCAATTGCTGGAT+CGG + Chr2:78973406-78973425 MsG0280011059.01.T01:CDS 45.0%
! TCAAATTTTGGACGAGGGTG+GGG + Chr2:78972652-78972671 MsG0280011059.01.T01:intron 45.0%
! TGGATTCACCATTTGGGACA+CGG - Chr2:78977100-78977119 None:intergenic 45.0%
! TGGGTAGTTTGGTTCGTGTA+AGG + Chr2:78973097-78973116 MsG0280011059.01.T01:intron 45.0%
!! AGCATTCCTCGATTTGGCTT+AGG - Chr2:78976809-78976828 None:intergenic 45.0%
!! ATTCCTCGATTTGGCTTAGG+GGG - Chr2:78976806-78976825 None:intergenic 45.0%
!! CATTCCTCGATTTGGCTTAG+GGG - Chr2:78976807-78976826 None:intergenic 45.0%
!! GCATTCCTCGATTTGGCTTA+GGG - Chr2:78976808-78976827 None:intergenic 45.0%
!! GGTTTTGTCTGCTAGGCATT+TGG + Chr2:78974461-78974480 MsG0280011059.01.T01:CDS 45.0%
!! TGCAGAAGGTTTTGTCTGCT+AGG + Chr2:78974454-78974473 MsG0280011059.01.T01:CDS 45.0%
!! TTGTGGTGCTGTGAAATGTG+TGG + Chr2:78972616-78972635 MsG0280011059.01.T01:intron 45.0%
!! AAAAAAAAAAAAAAAAAAAC+GGG - Chr2:78973783-78973802 None:intergenic 5.0%
!! ATTATATCTATATATATATA+GGG + Chr2:78973548-78973567 MsG0280011059.01.T01:intron 5.0%
!! TATTATATCTATATATATAT+AGG + Chr2:78973547-78973566 MsG0280011059.01.T01:intron 5.0%
ACTGCTTCTGCTTCAGACAG+TGG - Chr2:78976293-78976312 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - Chr2:78973287-78973306 None:intergenic 50.0%
AGCCGTCCTATTAAGATCGG+CGG + Chr2:78976497-78976516 MsG0280011059.01.T01:intron 50.0%
AGTGAGGATGTTGTAACCGG+TGG - Chr2:78973465-78973484 None:intergenic 50.0%
GAATGAAAGTCTCACCACGG+CGG - Chr2:78972120-78972139 None:intergenic 50.0%
GATGCTGTTGGTCCTATGAG+AGG + Chr2:78976067-78976086 MsG0280011059.01.T01:intron 50.0%
GCTATATCCCACCCTCTCAT+AGG - Chr2:78976082-78976101 None:intergenic 50.0%
GCTGATACAAGGATGTCCAC+CGG + Chr2:78973446-78973465 MsG0280011059.01.T01:CDS 50.0%
GGGGAAGTAGCTAGGTTTCT+TGG + Chr2:78972686-78972705 MsG0280011059.01.T01:intron 50.0%
GTGTGATCGCAGCTGATACA+AGG + Chr2:78973435-78973454 MsG0280011059.01.T01:CDS 50.0%
TATTAAACAAGGGGGGGGAG+AGG - Chr2:78973345-78973364 None:intergenic 50.0%
TGTTGGTCCTATGAGAGGGT+GGG + Chr2:78976072-78976091 MsG0280011059.01.T01:intron 50.0%
TTCAAGAACTTCACCTGGGC+AGG - Chr2:78976180-78976199 None:intergenic 50.0%
TTTGCATAGCCGTCCAAACC+AGG - Chr2:78977261-78977280 None:intergenic 50.0%
! TATGTTGACTGTCGACTGCC+TGG + Chr2:78977240-78977259 MsG0280011059.01.T01:CDS 50.0%
!! AGGAGTGCTACCAATTGTCC+TGG + Chr2:78977030-78977049 MsG0280011059.01.T01:intron 50.0%
!! AGGGTATACAAGGGTGTCAC+GGG - Chr2:78973149-78973168 None:intergenic 50.0%
!! GAGGGTATACAAGGGTGTCA+CGG - Chr2:78973150-78973169 None:intergenic 50.0%
!! GGATGGTTTGGTTCGGAATG+TGG - Chr2:78973066-78973085 None:intergenic 50.0%
AAAGCTAGGACTGTGGTGGC+CGG - Chr2:78972095-78972114 None:intergenic 55.0%
ACCGCGTTCCGAATCGTTTC+CGG + Chr2:78972073-78972092 MsG0280011059.01.T01:five_prime_UTR 55.0%
ACTTCACCTGGGCAGGTAAG+AGG - Chr2:78976173-78976192 None:intergenic 55.0%
AGCTAGGTTTCTTGGTGGGG+TGG + Chr2:78972694-78972713 MsG0280011059.01.T01:intron 55.0%
ATTCGGAACGCGGTGGTTCT+GGG - Chr2:78972067-78972086 None:intergenic 55.0%
CTAAGGGACCGTGTCCCAAA+TGG + Chr2:78977089-78977108 MsG0280011059.01.T01:intron 55.0%
CTGTTGGTCCTATGAGAGGG+TGG + Chr2:78976071-78976090 MsG0280011059.01.T01:intron 55.0%
GAGGGTGGGATATAGCTCTC+AGG + Chr2:78976086-78976105 MsG0280011059.01.T01:intron 55.0%
GCTAGGTTTCTTGGTGGGGT+GGG + Chr2:78972695-78972714 MsG0280011059.01.T01:intron 55.0%
GGAGAAAGCTAGGACTGTGG+TGG - Chr2:78972099-78972118 None:intergenic 55.0%
TGCGAAGGGGAAACTCTTGG+AGG + Chr2:78975135-78975154 MsG0280011059.01.T01:intron 55.0%
TGTGGTGGCCGGAAACGATT+CGG - Chr2:78972084-78972103 None:intergenic 55.0%
TTGCCCCCTAAGCCAAATCG+AGG + Chr2:78976800-78976819 MsG0280011059.01.T01:intron 55.0%
! GCTCTTTGGGGGAAGTAGCT+AGG + Chr2:78972678-78972697 MsG0280011059.01.T01:intron 55.0%
! TGACTGTCGACTGCCTGGTT+TGG + Chr2:78977245-78977264 MsG0280011059.01.T01:CDS 55.0%
!! ACAAGGGTGTCACGGGTGAT+AGG - Chr2:78973142-78973161 None:intergenic 55.0%
!! CAAGGGTGTCACGGGTGATA+GGG - Chr2:78973141-78973160 None:intergenic 55.0%
!! TGTCGACTGCCTGGTTTGGA+CGG + Chr2:78977249-78977268 MsG0280011059.01.T01:CDS 55.0%
AAACAAGGGGGGGGAGAGGA+GGG - Chr2:78973341-78973360 None:intergenic 60.0%
ACCTGGGCAGGTAAGAGGAG+TGG - Chr2:78976168-78976187 None:intergenic 60.0%
AGGGTGGGGACTGCTCTTTG+GGG + Chr2:78972666-78972685 MsG0280011059.01.T01:intron 60.0%
CCTGGGCAGGTAAGAGGAGT+GGG - Chr2:78976167-78976186 None:intergenic 60.0%
GAGGGTGGGGACTGCTCTTT+GGG + Chr2:78972665-78972684 MsG0280011059.01.T01:intron 60.0%
GATTCGGAACGCGGTGGTTC+TGG - Chr2:78972068-78972087 None:intergenic 60.0%
GCAGATGAGCTGCCCTGCAA+TGG + Chr2:78975856-78975875 MsG0280011059.01.T01:CDS 60.0%
GGCGGAGAAAGCTAGGACTG+TGG - Chr2:78972102-78972121 None:intergenic 60.0%
TAAACAAGGGGGGGGAGAGG+AGG - Chr2:78973342-78973361 None:intergenic 60.0%
TCACCACGGCGGAGAAAGCT+AGG - Chr2:78972109-78972128 None:intergenic 60.0%
TTGGGCGGCCTTGACAGTGA+AGG + Chr2:78975941-78975960 MsG0280011059.01.T01:CDS 60.0%
! AGTCCTAGCTTTCTCCGCCG+TGG + Chr2:78972103-78972122 MsG0280011059.01.T01:five_prime_UTR 60.0%
! GCAGGTAAGAGGAGTGGGCT+GGG - Chr2:78976162-78976181 None:intergenic 60.0%
! GCCGGAAACGATTCGGAACG+CGG - Chr2:78972077-78972096 None:intergenic 60.0%
! GGAAACGATTCGGAACGCGG+TGG - Chr2:78972074-78972093 None:intergenic 60.0%
!! AGGTAAGAGGAGTGGGCTGG+GGG - Chr2:78976160-78976179 None:intergenic 60.0%
!! CAGGTAAGAGGAGTGGGCTG+GGG - Chr2:78976161-78976180 None:intergenic 60.0%
!! GCGGTGGTTCTGGGTGGTTA+GGG - Chr2:78972058-78972077 None:intergenic 60.0%
AACAAGGGGGGGGAGAGGAG+GGG - Chr2:78973340-78973359 None:intergenic 65.0%
CCCACTCCTCTTACCTGCCC+AGG + Chr2:78976164-78976183 MsG0280011059.01.T01:intron 65.0%
CGAGGGTGGGGACTGCTCTT+TGG + Chr2:78972664-78972683 MsG0280011059.01.T01:intron 65.0%
GGCAGGTAAGAGGAGTGGGC+TGG - Chr2:78976163-78976182 None:intergenic 65.0%
GGGTGGGGACTGCTCTTTGG+GGG + Chr2:78972667-78972686 MsG0280011059.01.T01:intron 65.0%
!! CGCGGTGGTTCTGGGTGGTT+AGG - Chr2:78972059-78972078 None:intergenic 65.0%
!! GTGGGCTGGGGGACTTCAGT+TGG - Chr2:78976149-78976168 None:intergenic 65.0%
!! CGGAACGCGGTGGTTCTGGG+TGG - Chr2:78972064-78972083 None:intergenic 70.0%
GGGGGGAGAGGAGGGGAGAG+AGG - Chr2:78973333-78973352 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 78971999 78977290 78971999 ID=MsG0280011059.01;Name=MsG0280011059.01
Chr2 mRNA 78971999 78977290 78971999 ID=MsG0280011059.01.T01;Parent=MsG0280011059.01;Name=MsG0280011059.01.T01;_AED=0.48;_eAED=0.55;_QI=137|0.5|0.71|1|0.83|0.71|7|0|182
Chr2 exon 78971999 78972124 78971999 ID=MsG0280011059.01.T01:exon:9893;Parent=MsG0280011059.01.T01
Chr2 exon 78973222 78973279 78973222 ID=MsG0280011059.01.T01:exon:9894;Parent=MsG0280011059.01.T01
Chr2 exon 78973403 78973510 78973403 ID=MsG0280011059.01.T01:exon:9895;Parent=MsG0280011059.01.T01
Chr2 exon 78974371 78974482 78974371 ID=MsG0280011059.01.T01:exon:9896;Parent=MsG0280011059.01.T01
Chr2 exon 78975833 78975962 78975833 ID=MsG0280011059.01.T01:exon:9897;Parent=MsG0280011059.01.T01
Chr2 exon 78976279 78976363 78976279 ID=MsG0280011059.01.T01:exon:9898;Parent=MsG0280011059.01.T01
Chr2 exon 78977224 78977290 78977224 ID=MsG0280011059.01.T01:exon:9899;Parent=MsG0280011059.01.T01
Chr2 five_prime_UTR 78971999 78972124 78971999 ID=MsG0280011059.01.T01:five_prime_utr;Parent=MsG0280011059.01.T01
Chr2 five_prime_UTR 78973222 78973232 78973222 ID=MsG0280011059.01.T01:five_prime_utr;Parent=MsG0280011059.01.T01
Chr2 CDS 78973233 78973279 78973233 ID=MsG0280011059.01.T01:cds;Parent=MsG0280011059.01.T01
Chr2 CDS 78973403 78973510 78973403 ID=MsG0280011059.01.T01:cds;Parent=MsG0280011059.01.T01
Chr2 CDS 78974371 78974482 78974371 ID=MsG0280011059.01.T01:cds;Parent=MsG0280011059.01.T01
Chr2 CDS 78975833 78975962 78975833 ID=MsG0280011059.01.T01:cds;Parent=MsG0280011059.01.T01
Chr2 CDS 78976279 78976363 78976279 ID=MsG0280011059.01.T01:cds;Parent=MsG0280011059.01.T01
Chr2 CDS 78977224 78977290 78977224 ID=MsG0280011059.01.T01:cds;Parent=MsG0280011059.01.T01
Gene Sequence

>MsG0280011059.01.T01

ATGACTAAACAACACGCTAATTGGTCTCCATATGACAACAATGGAGGATCTTGTGTCGCAATTGCTGGATCGGATTACTGTGTGATCGCAGCTGATACAAGGATGTCCACCGGTTACAACATCCTCACTCGTGATTACTCCAAAATCTCTCACTTGTTTTGGGGTTTGTGTTTGTTTCGCAACAGAGCTGAGAAATGTGTGATGGCTTCTTCTGGTTTTCAAGCTGATGTGAAGGCTTTGCAGAAGGTTTTGTCTGCTAGGCATTTGACTTATCAGCATCAACACAACAAGCAGATGAGCTGCCCTGCAATGGCTCAATTGCTTTCAAACACACTTTATTACAAACGCTTCTTTCCTTACTATTCTTTCAATGTGTTGGGCGGCCTTGACAGTGAAGGATGCGTTACTCCACTGTCTGAAGCAGAAGCAGTTGATCTGGTCAAAACGTTTTTGCGTCTGCAACTGAGAGAGATATATACACTATTCAAAAAAGTTTTATATGTTGACTGTCGACTGCCTGGTTTGGACGGCTATGCAAAACTAGGCTAA

Protein sequence

>MsG0280011059.01.T01

MTKQHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLFWGLCLFRNRAEKCVMASSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGCVTPLSEAEAVDLVKTFLRLQLREIYTLFKKVLYVDCRLPGLDGYAKLG*