Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048230.01.T01 | XP_013466357.1 | 92.606 | 284 | 21 | 0 | 1 | 284 | 1 | 284 | 3.68E-173 | 494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048230.01.T01 | Q65XK7 | 55.924 | 211 | 61 | 5 | 111 | 289 | 76 | 286 | 6.14E-64 | 208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048230.01.T01 | A0A072VG64 | 92.606 | 284 | 21 | 0 | 1 | 284 | 1 | 284 | 1.76e-173 | 494 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048229.01 | MsG0080048230.01 | 0.878480 | 2.713527e-69 | 1.419296e-65 |
| MsG0080048230.01 | MsG0180000980.01 | 0.912775 | 1.323167e-83 | 3.026360e-79 |
| MsG0080048230.01 | MsG0280010945.01 | 0.807189 | 5.707345e-50 | 3.158406e-47 |
| MsG0080048230.01 | MsG0480020319.01 | 0.803713 | 3.057506e-49 | 1.547306e-46 |
| MsG0080048230.01 | MsG0580025280.01 | 0.805507 | 1.291228e-49 | 6.843115e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048230.01.T01 | MTR_1g028300 | 92.606 | 284 | 21 | 0 | 1 | 284 | 1 | 284 | 4.46e-177 | 494 |
| MsG0080048230.01.T01 | MTR_5g009370 | 59.116 | 181 | 66 | 3 | 112 | 284 | 52 | 232 | 1.84e-59 | 192 |
| MsG0080048230.01.T01 | MTR_4g125810 | 48.261 | 230 | 85 | 6 | 92 | 288 | 182 | 410 | 2.55e-55 | 187 |
| MsG0080048230.01.T01 | MTR_3g068200 | 47.982 | 223 | 85 | 7 | 86 | 284 | 60 | 275 | 5.18e-55 | 183 |
| MsG0080048230.01.T01 | MTR_1g015110 | 49.765 | 213 | 74 | 6 | 104 | 284 | 232 | 443 | 3.81e-54 | 184 |
| MsG0080048230.01.T01 | MTR_5g080680 | 55.615 | 187 | 62 | 3 | 113 | 284 | 102 | 282 | 6.80e-53 | 174 |
| MsG0080048230.01.T01 | MTR_3g104710 | 46.330 | 218 | 79 | 5 | 104 | 284 | 223 | 439 | 2.94e-52 | 179 |
| MsG0080048230.01.T01 | MTR_5g080680 | 55.615 | 187 | 62 | 3 | 113 | 284 | 102 | 282 | 4.71e-52 | 175 |
| MsG0080048230.01.T01 | MTR_2g040500 | 40.727 | 275 | 107 | 9 | 63 | 288 | 178 | 445 | 3.20e-50 | 174 |
| MsG0080048230.01.T01 | MTR_8g102550 | 45.192 | 208 | 81 | 5 | 111 | 288 | 101 | 305 | 2.56e-46 | 160 |
| MsG0080048230.01.T01 | MTR_1g014640 | 40.884 | 181 | 96 | 6 | 107 | 284 | 72 | 244 | 7.06e-28 | 110 |
| MsG0080048230.01.T01 | MTR_1g013400 | 40.884 | 181 | 96 | 6 | 107 | 284 | 72 | 244 | 7.06e-28 | 110 |
| MsG0080048230.01.T01 | MTR_3g105730 | 40.113 | 177 | 95 | 6 | 111 | 284 | 11 | 179 | 8.15e-27 | 106 |
| MsG0080048230.01.T01 | MTR_3g105730 | 40.113 | 177 | 95 | 6 | 111 | 284 | 33 | 201 | 8.79e-27 | 106 |
| MsG0080048230.01.T01 | MTR_1g115570 | 41.341 | 179 | 87 | 6 | 111 | 284 | 94 | 259 | 9.22e-27 | 107 |
| MsG0080048230.01.T01 | MTR_3g091060 | 36.500 | 200 | 116 | 6 | 88 | 284 | 70 | 261 | 1.94e-25 | 104 |
| MsG0080048230.01.T01 | MTR_1g086350 | 32.061 | 262 | 153 | 9 | 48 | 289 | 10 | 266 | 2.14e-25 | 104 |
| MsG0080048230.01.T01 | MTR_1g086350 | 36.508 | 189 | 104 | 6 | 114 | 289 | 65 | 250 | 2.54e-25 | 103 |
| MsG0080048230.01.T01 | MTR_4g116420 | 34.973 | 183 | 102 | 5 | 111 | 284 | 84 | 258 | 1.20e-23 | 99.4 |
| MsG0080048230.01.T01 | MTR_3g105730 | 34.872 | 195 | 113 | 6 | 82 | 274 | 8 | 190 | 2.51e-23 | 95.5 |
| MsG0080048230.01.T01 | MTR_3g464700 | 39.759 | 166 | 92 | 4 | 120 | 284 | 95 | 253 | 5.79e-22 | 94.0 |
| MsG0080048230.01.T01 | MTR_4g123080 | 32.632 | 190 | 110 | 7 | 114 | 289 | 58 | 243 | 1.39e-21 | 93.6 |
| MsG0080048230.01.T01 | MTR_4g123080 | 32.632 | 190 | 110 | 7 | 114 | 289 | 76 | 261 | 1.61e-21 | 93.6 |
| MsG0080048230.01.T01 | MTR_3g464650 | 40.120 | 167 | 90 | 5 | 120 | 284 | 71 | 229 | 3.28e-21 | 91.7 |
| MsG0080048230.01.T01 | MTR_5g024340 | 35.811 | 148 | 81 | 6 | 145 | 288 | 124 | 261 | 4.66e-21 | 92.0 |
| MsG0080048230.01.T01 | MTR_3g107880 | 34.197 | 193 | 108 | 7 | 104 | 285 | 15 | 199 | 7.35e-21 | 90.9 |
| MsG0080048230.01.T01 | MTR_3g107880 | 34.197 | 193 | 108 | 7 | 104 | 285 | 72 | 256 | 8.15e-21 | 91.7 |
| MsG0080048230.01.T01 | MTR_3g107880 | 34.197 | 193 | 108 | 7 | 104 | 285 | 73 | 257 | 8.23e-21 | 91.7 |
| MsG0080048230.01.T01 | MTR_1g086350 | 37.748 | 151 | 84 | 5 | 146 | 289 | 17 | 164 | 2.60e-20 | 89.0 |
| MsG0080048230.01.T01 | MTR_2g033000 | 30.688 | 189 | 115 | 6 | 114 | 289 | 63 | 248 | 6.41e-20 | 89.0 |
| MsG0080048230.01.T01 | MTR_5g071550 | 38.824 | 170 | 88 | 5 | 120 | 284 | 131 | 289 | 2.68e-19 | 87.0 |
| MsG0080048230.01.T01 | MTR_3g105880 | 33.028 | 218 | 95 | 5 | 111 | 284 | 22 | 232 | 2.78e-19 | 86.7 |
| MsG0080048230.01.T01 | MTR_5g071550 | 39.412 | 170 | 87 | 6 | 120 | 284 | 131 | 289 | 4.91e-19 | 86.3 |
| MsG0080048230.01.T01 | MTR_3g105880 | 33.028 | 218 | 95 | 5 | 111 | 284 | 22 | 232 | 6.24e-19 | 85.9 |
| MsG0080048230.01.T01 | MTR_1g014190 | 32.110 | 218 | 97 | 5 | 111 | 284 | 22 | 232 | 1.21e-18 | 85.1 |
| MsG0080048230.01.T01 | MTR_1g014190 | 32.110 | 218 | 97 | 5 | 111 | 284 | 60 | 270 | 1.38e-18 | 85.5 |
| MsG0080048230.01.T01 | MTR_4g094208 | 35.165 | 182 | 104 | 8 | 108 | 284 | 25 | 197 | 6.38e-17 | 79.3 |
| MsG0080048230.01.T01 | MTR_4g007440 | 32.579 | 221 | 92 | 6 | 111 | 284 | 22 | 232 | 1.26e-16 | 79.3 |
| MsG0080048230.01.T01 | MTR_4g118340 | 39.394 | 132 | 64 | 5 | 145 | 267 | 86 | 210 | 5.96e-16 | 77.8 |
| MsG0080048230.01.T01 | MTR_4g094208 | 33.163 | 196 | 114 | 9 | 81 | 273 | 3 | 184 | 3.22e-15 | 73.2 |
| MsG0080048230.01.T01 | MTR_5g071550 | 37.500 | 144 | 75 | 4 | 120 | 259 | 131 | 263 | 4.06e-15 | 74.3 |
| MsG0080048230.01.T01 | MTR_5g063940 | 34.395 | 157 | 86 | 7 | 135 | 284 | 9 | 155 | 7.95e-15 | 72.8 |
| MsG0080048230.01.T01 | MTR_5g063940 | 34.395 | 157 | 86 | 7 | 135 | 284 | 56 | 202 | 1.78e-14 | 72.4 |
| MsG0080048230.01.T01 | MTR_8g463130 | 35.542 | 166 | 90 | 7 | 125 | 284 | 48 | 202 | 4.34e-14 | 71.2 |
| MsG0080048230.01.T01 | MTR_8g463130 | 35.542 | 166 | 90 | 7 | 125 | 284 | 20 | 174 | 5.18e-14 | 70.9 |
| MsG0080048230.01.T01 | MTR_2g008850 | 33.702 | 181 | 108 | 7 | 108 | 284 | 29 | 201 | 9.23e-14 | 70.5 |
| MsG0080048230.01.T01 | MTR_3g074610 | 33.766 | 154 | 91 | 6 | 135 | 284 | 56 | 202 | 2.38e-13 | 69.3 |
| MsG0080048230.01.T01 | MTR_6g081850 | 29.717 | 212 | 122 | 8 | 93 | 284 | 29 | 233 | 4.07e-13 | 68.9 |
| MsG0080048230.01.T01 | MTR_2g008850 | 34.459 | 148 | 88 | 5 | 140 | 284 | 14 | 155 | 6.69e-13 | 67.4 |
| MsG0080048230.01.T01 | MTR_3g491830 | 30.688 | 189 | 109 | 8 | 110 | 284 | 58 | 238 | 1.13e-12 | 68.2 |
| MsG0080048230.01.T01 | MTR_1g016620 | 31.707 | 164 | 85 | 6 | 126 | 265 | 52 | 212 | 3.90e-12 | 66.2 |
| MsG0080048230.01.T01 | MTR_2g078760 | 32.121 | 165 | 99 | 6 | 124 | 284 | 98 | 253 | 1.33e-11 | 64.3 |
| MsG0080048230.01.T01 | MTR_2g078760 | 32.121 | 165 | 99 | 6 | 124 | 284 | 98 | 253 | 1.70e-11 | 64.3 |
| MsG0080048230.01.T01 | MTR_2g078760 | 32.121 | 165 | 99 | 6 | 124 | 284 | 19 | 174 | 2.00e-11 | 63.2 |
| MsG0080048230.01.T01 | MTR_2g020970 | 35.714 | 140 | 71 | 6 | 145 | 272 | 87 | 219 | 2.86e-11 | 63.5 |
| MsG0080048230.01.T01 | MTR_2g020970 | 35.714 | 140 | 71 | 6 | 145 | 272 | 87 | 219 | 4.38e-11 | 63.5 |
| MsG0080048230.01.T01 | MTR_8g074930 | 30.159 | 189 | 111 | 6 | 115 | 284 | 47 | 233 | 4.52e-11 | 63.2 |
| MsG0080048230.01.T01 | MTR_3g032700 | 31.122 | 196 | 98 | 10 | 113 | 284 | 39 | 221 | 4.61e-11 | 63.2 |
| MsG0080048230.01.T01 | MTR_3g032660 | 31.122 | 196 | 98 | 10 | 113 | 284 | 39 | 221 | 4.65e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048230.01.T01 | AT2G29380 | 47.034 | 236 | 97 | 6 | 66 | 284 | 41 | 265 | 6.52e-56 | 184 |
| MsG0080048230.01.T01 | AT3G11410 | 51.031 | 194 | 69 | 2 | 114 | 284 | 106 | 296 | 1.64e-55 | 184 |
| MsG0080048230.01.T01 | AT5G59220 | 52.821 | 195 | 69 | 4 | 113 | 289 | 112 | 301 | 3.95e-55 | 181 |
| MsG0080048230.01.T01 | AT1G07430 | 52.356 | 191 | 69 | 4 | 113 | 284 | 121 | 308 | 6.77e-55 | 184 |
| MsG0080048230.01.T01 | AT5G59220 | 53.158 | 190 | 66 | 4 | 113 | 284 | 112 | 296 | 2.27e-52 | 177 |
| MsG0080048230.01.T01 | AT4G26080 | 52.020 | 198 | 76 | 6 | 104 | 284 | 121 | 316 | 1.62e-51 | 175 |
| MsG0080048230.01.T01 | AT1G72770 | 47.964 | 221 | 74 | 7 | 104 | 284 | 182 | 401 | 5.25e-50 | 170 |
| MsG0080048230.01.T01 | AT1G72770 | 47.964 | 221 | 74 | 7 | 104 | 284 | 182 | 401 | 5.25e-50 | 170 |
| MsG0080048230.01.T01 | AT5G57050 | 47.596 | 208 | 86 | 5 | 104 | 289 | 105 | 311 | 1.14e-49 | 167 |
| MsG0080048230.01.T01 | AT1G17550 | 45.946 | 222 | 78 | 6 | 104 | 284 | 181 | 401 | 2.80e-49 | 171 |
| MsG0080048230.01.T01 | AT1G17550 | 45.946 | 222 | 78 | 6 | 104 | 284 | 181 | 401 | 2.80e-49 | 171 |
| MsG0080048230.01.T01 | AT1G72770 | 47.964 | 221 | 74 | 7 | 104 | 284 | 182 | 401 | 3.52e-49 | 170 |
| MsG0080048230.01.T01 | AT1G72770 | 47.964 | 221 | 74 | 7 | 104 | 284 | 182 | 401 | 3.52e-49 | 170 |
| MsG0080048230.01.T01 | AT1G72770 | 47.964 | 221 | 74 | 7 | 104 | 284 | 182 | 401 | 3.52e-49 | 170 |
| MsG0080048230.01.T01 | AT5G57050 | 48.276 | 203 | 82 | 5 | 104 | 284 | 65 | 266 | 4.30e-48 | 165 |
| MsG0080048230.01.T01 | AT5G57050 | 48.276 | 203 | 82 | 5 | 104 | 284 | 105 | 306 | 6.72e-48 | 165 |
| MsG0080048230.01.T01 | AT5G51760 | 42.727 | 220 | 96 | 6 | 94 | 284 | 58 | 276 | 3.84e-38 | 139 |
| MsG0080048230.01.T01 | AT5G51760 | 42.727 | 220 | 96 | 6 | 94 | 284 | 88 | 306 | 6.28e-38 | 139 |
| MsG0080048230.01.T01 | AT4G31750 | 39.320 | 206 | 109 | 7 | 82 | 284 | 8 | 200 | 2.93e-29 | 113 |
| MsG0080048230.01.T01 | AT4G31750 | 39.320 | 206 | 109 | 7 | 82 | 284 | 8 | 200 | 3.57e-29 | 113 |
| MsG0080048230.01.T01 | AT4G31750 | 39.320 | 206 | 109 | 7 | 82 | 284 | 8 | 200 | 3.57e-29 | 113 |
| MsG0080048230.01.T01 | AT5G10740 | 41.436 | 181 | 95 | 6 | 107 | 284 | 28 | 200 | 2.24e-28 | 112 |
| MsG0080048230.01.T01 | AT5G10740 | 41.436 | 181 | 95 | 6 | 107 | 284 | 28 | 200 | 2.24e-28 | 112 |
| MsG0080048230.01.T01 | AT1G67820 | 43.750 | 176 | 86 | 5 | 113 | 284 | 85 | 251 | 3.06e-28 | 112 |
| MsG0080048230.01.T01 | AT1G67820 | 43.750 | 176 | 86 | 5 | 113 | 284 | 121 | 287 | 3.65e-28 | 112 |
| MsG0080048230.01.T01 | AT1G43900 | 40.223 | 179 | 92 | 6 | 111 | 284 | 122 | 290 | 5.06e-28 | 111 |
| MsG0080048230.01.T01 | AT5G24940 | 40.331 | 181 | 97 | 6 | 107 | 284 | 28 | 200 | 1.70e-27 | 110 |
| MsG0080048230.01.T01 | AT5G53140 | 40.449 | 178 | 93 | 6 | 111 | 284 | 100 | 268 | 2.59e-25 | 104 |
| MsG0080048230.01.T01 | AT5G53140 | 40.449 | 178 | 93 | 6 | 111 | 284 | 100 | 268 | 2.59e-25 | 104 |
| MsG0080048230.01.T01 | AT3G62260 | 34.737 | 190 | 107 | 7 | 114 | 289 | 80 | 266 | 3.31e-23 | 98.2 |
| MsG0080048230.01.T01 | AT3G62260 | 34.737 | 190 | 107 | 7 | 114 | 289 | 79 | 265 | 3.76e-23 | 98.2 |
| MsG0080048230.01.T01 | AT3G51470 | 34.946 | 186 | 106 | 7 | 108 | 288 | 24 | 199 | 6.11e-23 | 96.7 |
| MsG0080048230.01.T01 | AT3G51470 | 35.556 | 180 | 101 | 7 | 114 | 288 | 74 | 243 | 6.12e-23 | 97.4 |
| MsG0080048230.01.T01 | AT2G33700 | 39.189 | 148 | 76 | 6 | 145 | 288 | 123 | 260 | 8.66e-23 | 97.1 |
| MsG0080048230.01.T01 | AT1G07160 | 31.560 | 282 | 163 | 10 | 17 | 287 | 37 | 299 | 1.54e-21 | 93.6 |
| MsG0080048230.01.T01 | AT3G62260 | 35.088 | 171 | 100 | 6 | 127 | 289 | 9 | 176 | 1.70e-21 | 92.4 |
| MsG0080048230.01.T01 | AT2G25620 | 35.165 | 182 | 97 | 6 | 114 | 284 | 91 | 262 | 8.91e-21 | 91.7 |
| MsG0080048230.01.T01 | AT2G25620 | 35.165 | 182 | 97 | 6 | 114 | 284 | 91 | 262 | 8.91e-21 | 91.7 |
| MsG0080048230.01.T01 | AT2G30020 | 40.341 | 176 | 91 | 6 | 120 | 287 | 147 | 316 | 9.94e-21 | 91.7 |
| MsG0080048230.01.T01 | AT2G40180 | 37.853 | 177 | 98 | 5 | 120 | 287 | 136 | 309 | 6.88e-20 | 89.0 |
| MsG0080048230.01.T01 | AT4G31860 | 32.569 | 218 | 96 | 5 | 111 | 284 | 22 | 232 | 2.33e-19 | 86.3 |
| MsG0080048230.01.T01 | AT2G25070 | 32.110 | 218 | 97 | 5 | 111 | 284 | 22 | 232 | 2.52e-19 | 87.0 |
| MsG0080048230.01.T01 | AT2G25070 | 32.110 | 218 | 97 | 5 | 111 | 284 | 22 | 232 | 2.52e-19 | 87.0 |
| MsG0080048230.01.T01 | AT4G31860 | 31.982 | 222 | 100 | 5 | 107 | 284 | 18 | 232 | 2.66e-19 | 85.9 |
| MsG0080048230.01.T01 | AT4G31860 | 32.569 | 218 | 96 | 5 | 111 | 284 | 22 | 232 | 6.08e-19 | 85.9 |
| MsG0080048230.01.T01 | AT1G48040 | 33.854 | 192 | 103 | 8 | 114 | 288 | 80 | 264 | 2.03e-17 | 82.0 |
| MsG0080048230.01.T01 | AT1G78200 | 34.395 | 157 | 89 | 5 | 135 | 284 | 9 | 158 | 2.41e-17 | 79.7 |
| MsG0080048230.01.T01 | AT1G78200 | 34.395 | 157 | 89 | 5 | 135 | 284 | 9 | 158 | 2.41e-17 | 79.7 |
| MsG0080048230.01.T01 | AT1G78200 | 34.395 | 157 | 89 | 5 | 135 | 284 | 54 | 203 | 5.68e-17 | 79.3 |
| MsG0080048230.01.T01 | AT1G78200 | 34.395 | 157 | 89 | 5 | 135 | 284 | 54 | 203 | 5.68e-17 | 79.3 |
| MsG0080048230.01.T01 | AT1G78200 | 34.395 | 157 | 89 | 5 | 135 | 284 | 54 | 203 | 5.68e-17 | 79.3 |
| MsG0080048230.01.T01 | AT3G17250 | 28.740 | 254 | 160 | 9 | 51 | 288 | 58 | 306 | 4.30e-16 | 78.2 |
| MsG0080048230.01.T01 | AT1G34750 | 35.484 | 155 | 87 | 6 | 135 | 284 | 56 | 202 | 1.07e-15 | 75.5 |
| MsG0080048230.01.T01 | AT1G34750 | 35.484 | 155 | 87 | 6 | 135 | 284 | 56 | 202 | 1.42e-15 | 75.5 |
| MsG0080048230.01.T01 | AT1G34750 | 35.484 | 155 | 87 | 6 | 135 | 284 | 56 | 202 | 1.42e-15 | 75.5 |
| MsG0080048230.01.T01 | AT1G34750 | 35.484 | 155 | 87 | 6 | 135 | 284 | 56 | 202 | 1.42e-15 | 75.5 |
| MsG0080048230.01.T01 | AT1G22280 | 38.095 | 147 | 80 | 7 | 145 | 284 | 65 | 207 | 1.59e-15 | 75.5 |
| MsG0080048230.01.T01 | AT3G51370 | 30.952 | 210 | 124 | 6 | 94 | 284 | 26 | 233 | 1.33e-14 | 73.6 |
| MsG0080048230.01.T01 | AT3G51370 | 30.952 | 210 | 124 | 6 | 94 | 284 | 26 | 233 | 1.33e-14 | 73.6 |
| MsG0080048230.01.T01 | AT4G32950 | 32.044 | 181 | 107 | 7 | 97 | 266 | 26 | 201 | 2.42e-14 | 72.0 |
| MsG0080048230.01.T01 | AT1G22280 | 36.735 | 147 | 76 | 7 | 145 | 284 | 65 | 201 | 4.12e-14 | 71.2 |
| MsG0080048230.01.T01 | AT4G32950 | 32.044 | 181 | 107 | 7 | 97 | 266 | 26 | 201 | 5.86e-14 | 71.6 |
| MsG0080048230.01.T01 | AT4G28400 | 34.146 | 164 | 95 | 6 | 125 | 284 | 27 | 181 | 8.39e-14 | 70.1 |
| MsG0080048230.01.T01 | AT4G28400 | 34.146 | 164 | 95 | 6 | 125 | 284 | 49 | 203 | 9.82e-14 | 70.1 |
| MsG0080048230.01.T01 | AT4G27800 | 30.688 | 189 | 109 | 7 | 110 | 284 | 57 | 237 | 1.06e-13 | 71.2 |
| MsG0080048230.01.T01 | AT4G27800 | 30.159 | 189 | 110 | 7 | 110 | 284 | 57 | 237 | 1.07e-13 | 70.9 |
| MsG0080048230.01.T01 | AT4G27800 | 30.159 | 189 | 110 | 7 | 110 | 284 | 57 | 237 | 1.22e-13 | 70.5 |
| MsG0080048230.01.T01 | AT4G28400 | 34.146 | 164 | 95 | 6 | 125 | 284 | 49 | 203 | 1.49e-13 | 69.7 |
| MsG0080048230.01.T01 | AT5G66080 | 31.100 | 209 | 122 | 6 | 96 | 284 | 30 | 236 | 1.22e-12 | 67.8 |
| MsG0080048230.01.T01 | AT3G15260 | 33.333 | 165 | 97 | 6 | 124 | 284 | 54 | 209 | 1.36e-12 | 67.0 |
| MsG0080048230.01.T01 | AT3G15260 | 33.333 | 165 | 97 | 6 | 124 | 284 | 54 | 209 | 1.36e-12 | 67.0 |
| MsG0080048230.01.T01 | AT3G06270 | 34.615 | 130 | 73 | 4 | 145 | 267 | 88 | 212 | 3.35e-12 | 66.6 |
| MsG0080048230.01.T01 | AT2G20630 | 32.317 | 164 | 98 | 6 | 125 | 284 | 45 | 199 | 3.49e-12 | 65.9 |
| MsG0080048230.01.T01 | AT2G20630 | 32.317 | 164 | 98 | 6 | 125 | 284 | 45 | 199 | 5.44e-12 | 65.5 |
| MsG0080048230.01.T01 | AT1G22280 | 34.074 | 135 | 74 | 6 | 145 | 274 | 65 | 189 | 7.39e-12 | 63.5 |
| MsG0080048230.01.T01 | AT2G34740 | 29.878 | 164 | 102 | 7 | 125 | 284 | 115 | 269 | 7.01e-11 | 62.4 |
| MsG0080048230.01.T01 | AT2G34740 | 29.878 | 164 | 102 | 7 | 125 | 284 | 97 | 251 | 7.74e-11 | 62.0 |
| MsG0080048230.01.T01 | AT2G34740 | 29.878 | 164 | 102 | 7 | 125 | 284 | 101 | 255 | 8.66e-11 | 62.4 |
Find 101 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAATTCATTGAAGATTAT+TGG | 0.139486 | contig247end:-14148 | MsG0080048230.01.T01:three_prime_UTR |
| GCGGAGGAGGTGGAGAAGTA+TGG | 0.235504 | contig247end:-15661 | MsG0080048230.01.T01:CDS |
| TAATTAATCAATGGATTTGT+TGG | 0.321615 | contig247end:-14489 | MsG0080048230.01.T01:three_prime_UTR |
| CTCAGGTGGCGGAGGCGTGT+AGG | 0.323775 | contig247end:-15705 | MsG0080048230.01.T01:CDS |
| ATCAACTCATCAGGCCTGTT+TGG | 0.331017 | contig247end:+14671 | None:intergenic |
| CTTGCAACCTCACGATCTAT+AGG | 0.347379 | contig247end:-14587 | MsG0080048230.01.T01:CDS |
| GTGTCGTTTCATGTTCTTCA+TGG | 0.355665 | contig247end:+16237 | None:intergenic |
| AAGCAATGTGTCATCTTGAT+TGG | 0.381909 | contig247end:+14304 | None:intergenic |
| AGTTGTGGCGGTTGTTGTTA+AGG | 0.382033 | contig247end:-15533 | MsG0080048230.01.T01:CDS |
| ACCGGAGAAGGTTGAAAATT+CGG | 0.382435 | contig247end:-16147 | MsG0080048230.01.T01:CDS |
| GGGAAGAGGTGGTGAAGCTT+TGG | 0.383271 | contig247end:-15467 | MsG0080048230.01.T01:CDS |
| AGAGTGATGGAAGGGTGTTT+TGG | 0.394683 | contig247end:-15613 | MsG0080048230.01.T01:CDS |
| TGGAATGGCCACCGTGTTCT+TGG | 0.396208 | contig247end:-14614 | MsG0080048230.01.T01:CDS |
| CTGGTGGAAGAGTTATAAAC+TGG | 0.397688 | contig247end:-14634 | MsG0080048230.01.T01:CDS |
| GGATTTGTCAAGTGATCATA+AGG | 0.404582 | contig247end:-15446 | MsG0080048230.01.T01:intron |
| GCAAAGATCCACGTCGGAAA+TGG | 0.405131 | contig247end:-16103 | MsG0080048230.01.T01:CDS |
| ATAATTAATTAATTAATCAA+TGG | 0.405903 | contig247end:-14498 | MsG0080048230.01.T01:three_prime_UTR |
| GTGGAGAAGTATGGGAATGA+TGG | 0.407900 | contig247end:-15652 | MsG0080048230.01.T01:CDS |
| GATGCAGTGAGTGTGGAGAT+AGG | 0.419051 | contig247end:-15790 | MsG0080048230.01.T01:CDS |
| TCTATTCTCATCAACTCATC+AGG | 0.424557 | contig247end:+14662 | None:intergenic |
| TTGTTTGTACACAGCCAAAC+AGG | 0.432694 | contig247end:-14685 | MsG0080048230.01.T01:intron |
| TAGTTGCTAGCGTATGATAA+TGG | 0.448497 | contig247end:-14526 | MsG0080048230.01.T01:three_prime_UTR |
| GCTTAAATTCTCTCATAAAG+AGG | 0.459632 | contig247end:-14285 | MsG0080048230.01.T01:three_prime_UTR |
| TAGGATTGTGGCGGAGGAGG+TGG | 0.460409 | contig247end:-15671 | MsG0080048230.01.T01:CDS |
| TCATGGTGGTGCTCAGGTGG+CGG | 0.466235 | contig247end:-15716 | MsG0080048230.01.T01:CDS |
| CGGTATCAACGATAGGTTGT+AGG | 0.473643 | contig247end:-15825 | MsG0080048230.01.T01:CDS |
| TCAGGTGGCGGAGGCGTGTA+GGG | 0.473874 | contig247end:-15704 | MsG0080048230.01.T01:CDS |
| CGGAGGAGGTGGAGAAGTAT+GGG | 0.475067 | contig247end:-15660 | MsG0080048230.01.T01:CDS |
| TGGTGATTCTAGAGCCGTCT+TGG | 0.475428 | contig247end:-15488 | MsG0080048230.01.T01:CDS |
| TGGCTGGTGATGCCACGGTT+AGG | 0.477314 | contig247end:-15573 | MsG0080048230.01.T01:CDS |
| TGGAGAAGTATGGGAATGAT+GGG | 0.480508 | contig247end:-15651 | MsG0080048230.01.T01:CDS |
| GATAGGTTGTAGGAAGGAAA+TGG | 0.481470 | contig247end:-15815 | MsG0080048230.01.T01:CDS |
| TTCGGTGTTTATGACGGTCA+TGG | 0.483965 | contig247end:-15733 | MsG0080048230.01.T01:CDS |
| GGAGAGAAGTGTGATTTCTT+CGG | 0.486877 | contig247end:-15751 | MsG0080048230.01.T01:CDS |
| TGGTAAAATGGATAGGGAGG+TGG | 0.492394 | contig247end:-15593 | MsG0080048230.01.T01:CDS |
| AGCTTCGTAACTGCTCCAAC+CGG | 0.504483 | contig247end:+16181 | None:intergenic |
| TGGTGGTGCTCAGGTGGCGG+AGG | 0.505538 | contig247end:-15713 | MsG0080048230.01.T01:CDS |
| ATTTGAGTGGGAGAGAGTGA+TGG | 0.507256 | contig247end:-15626 | MsG0080048230.01.T01:CDS |
| GGTTGGAGCAGTTACGAAGC+TGG | 0.507410 | contig247end:-16179 | MsG0080048230.01.T01:CDS |
| ACATAGGATTGTGGCGGAGG+AGG | 0.510112 | contig247end:-15674 | MsG0080048230.01.T01:CDS |
| TCTAGAGCCGTCTTGGGAAG+AGG | 0.518511 | contig247end:-15481 | MsG0080048230.01.T01:CDS |
| GGTGATTCTAGAGCCGTCTT+GGG | 0.523572 | contig247end:-15487 | MsG0080048230.01.T01:CDS |
| ATTACATAGGATTGTGGCGG+AGG | 0.524499 | contig247end:-15677 | MsG0080048230.01.T01:CDS |
| TGACGGTCATGGTGGTGCTC+AGG | 0.528135 | contig247end:-15722 | MsG0080048230.01.T01:CDS |
| CGACGAGTGGATTCTCCGGT+TGG | 0.528374 | contig247end:-16196 | MsG0080048230.01.T01:CDS |
| AATGGAGGATGCAGTGAGTG+TGG | 0.528815 | contig247end:-15797 | MsG0080048230.01.T01:CDS |
| ACAACCTCTATCGTATGGTT+CGG | 0.532732 | contig247end:-15845 | MsG0080048230.01.T01:CDS |
| TGGAGAATATTCACCGGAGA+AGG | 0.534160 | contig247end:-16159 | MsG0080048230.01.T01:CDS |
| CGGTCATGGTGGTGCTCAGG+TGG | 0.536858 | contig247end:-15719 | MsG0080048230.01.T01:CDS |
| TCGACGAGAGATTCATGAAT+CGG | 0.538929 | contig247end:-16047 | MsG0080048230.01.T01:CDS |
| GTTAGCAACTTCTTCATCAT+CGG | 0.543064 | contig247end:-16008 | MsG0080048230.01.T01:CDS |
| CAACCTCACGATCTATAGGT+TGG | 0.545347 | contig247end:-14583 | MsG0080048230.01.T01:CDS |
| GGAATCTTCTCTCCGACGAG+TGG | 0.547552 | contig247end:-16209 | MsG0080048230.01.T01:CDS |
| ATTCATTGAAGATTATTGGA+CGG | 0.552577 | contig247end:-14144 | MsG0080048230.01.T01:three_prime_UTR |
| CGTGGGATCTACCGCAGTTG+TGG | 0.554747 | contig247end:-15548 | MsG0080048230.01.T01:CDS |
| AGGTTGTAGGAAGGAAATGG+AGG | 0.555635 | contig247end:-15812 | MsG0080048230.01.T01:CDS |
| GAACATGAAACGACACTCAT+CGG | 0.557105 | contig247end:-16230 | MsG0080048230.01.T01:CDS |
| GATTTCTTCGGTGTTTATGA+CGG | 0.557309 | contig247end:-15739 | MsG0080048230.01.T01:CDS |
| CGACGACGGTAGTTTAGAAA+CGG | 0.565353 | contig247end:-16077 | MsG0080048230.01.T01:CDS |
| GTCGGAAATGGCTCCGACGA+CGG | 0.566809 | contig247end:-16091 | MsG0080048230.01.T01:CDS |
| GATACCGAACCATACGATAG+AGG | 0.569235 | contig247end:+15841 | None:intergenic |
| GATCAGTCATCCAAGCAAAA+CGG | 0.570060 | contig247end:-15977 | MsG0080048230.01.T01:CDS |
| TCTCCGACGAGTGGATTCTC+CGG | 0.570803 | contig247end:-16200 | MsG0080048230.01.T01:CDS |
| AAAATGGATAGGGAGGTGGC+TGG | 0.576826 | contig247end:-15589 | MsG0080048230.01.T01:CDS |
| CAACAACAACCTCTATCGTA+TGG | 0.576906 | contig247end:-15850 | MsG0080048230.01.T01:CDS |
| GGAAGAGTTATAAACTGGAA+TGG | 0.578243 | contig247end:-14629 | MsG0080048230.01.T01:CDS |
| GGGATCTACCGCAGTTGTGG+CGG | 0.583799 | contig247end:-15545 | MsG0080048230.01.T01:CDS |
| TTGATGAGAATAGAAGAAGC+TGG | 0.583873 | contig247end:-14653 | MsG0080048230.01.T01:CDS |
| GAGTGGGAGAGAGTGATGGA+AGG | 0.592483 | contig247end:-15622 | MsG0080048230.01.T01:CDS |
| TGATGCCACGGTTAGGACCG+TGG | 0.593710 | contig247end:-15566 | MsG0080048230.01.T01:CDS |
| TGTGGCGGTTGTTGTTAAGG+AGG | 0.594420 | contig247end:-15530 | MsG0080048230.01.T01:CDS |
| GGAATGATGGGGAATTTGAG+TGG | 0.595276 | contig247end:-15639 | MsG0080048230.01.T01:CDS |
| AGCAACTTCTTCATCATCGG+AGG | 0.598936 | contig247end:-16005 | MsG0080048230.01.T01:CDS |
| TATGGTTCGGTATCAACGAT+AGG | 0.599607 | contig247end:-15832 | MsG0080048230.01.T01:CDS |
| GGAGGTGGCTGGTGATGCCA+CGG | 0.615165 | contig247end:-15578 | MsG0080048230.01.T01:CDS |
| CACAACTGCGGTAGATCCCA+CGG | 0.615332 | contig247end:+15549 | None:intergenic |
| GATGCCACGGTTAGGACCGT+GGG | 0.622307 | contig247end:-15565 | MsG0080048230.01.T01:CDS |
| ATCAACGATAGGTTGTAGGA+AGG | 0.626719 | contig247end:-15821 | MsG0080048230.01.T01:CDS |
| CGTCGGAGCCATTTCCGACG+TGG | 0.626743 | contig247end:+16095 | None:intergenic |
| GGAGAGATTACATAGGATTG+TGG | 0.628007 | contig247end:-15683 | MsG0080048230.01.T01:CDS |
| CGTTTCTAAACTACCGTCGT+CGG | 0.628182 | contig247end:+16078 | None:intergenic |
| ATGAGAATAGAAGAAGCTGG+TGG | 0.630044 | contig247end:-14650 | MsG0080048230.01.T01:CDS |
| CGAAGCTGGAGAATATTCAC+CGG | 0.630349 | contig247end:-16165 | MsG0080048230.01.T01:CDS |
| AGTGGGAGAGAGTGATGGAA+GGG | 0.635076 | contig247end:-15621 | MsG0080048230.01.T01:CDS |
| GAATGATGGGGAATTTGAGT+GGG | 0.638753 | contig247end:-15638 | MsG0080048230.01.T01:CDS |
| TAACCAACCTATAGATCGTG+AGG | 0.647099 | contig247end:+14580 | None:intergenic |
| AACAACAACCGCCACAACTG+CGG | 0.652136 | contig247end:+15537 | None:intergenic |
| TTCACCACCTCTTCCCAAGA+CGG | 0.652418 | contig247end:+15474 | None:intergenic |
| TTGCAAGAACACCAAGAACA+CGG | 0.661960 | contig247end:+14603 | None:intergenic |
| CGTGTAGGGAGAGATTACAT+AGG | 0.663499 | contig247end:-15690 | MsG0080048230.01.T01:CDS |
| GATCATATACACAAAACATG+TGG | 0.665691 | contig247end:+14220 | None:intergenic |
| GAGATTACATAGGATTGTGG+CGG | 0.666518 | contig247end:-15680 | MsG0080048230.01.T01:CDS |
| GTCATCCAAGCAAAACGGAG+AGG | 0.668288 | contig247end:-15972 | MsG0080048230.01.T01:intron |
| AGAGCCGTCTTGGGAAGAGG+TGG | 0.668426 | contig247end:-15478 | MsG0080048230.01.T01:CDS |
| CAACCGGAGAATCCACTCGT+CGG | 0.678394 | contig247end:+16197 | None:intergenic |
| GGAGAAGTATGGGAATGATG+GGG | 0.682396 | contig247end:-15650 | MsG0080048230.01.T01:CDS |
| GCGATCGTTGTTGCAAACTG+TGG | 0.686693 | contig247end:-15508 | MsG0080048230.01.T01:CDS |
| AGATCCCACGGTCCTAACCG+TGG | 0.694882 | contig247end:+15561 | None:intergenic |
| TGTCAAGCAAAGATCCACGT+CGG | 0.732864 | contig247end:-16109 | MsG0080048230.01.T01:CDS |
| GGTGTTTATGACGGTCATGG+TGG | 0.734025 | contig247end:-15730 | MsG0080048230.01.T01:CDS |
| CAAGAACACCAAGAACACGG+TGG | 0.824774 | contig247end:+14606 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATATATATAAAGAAAAA+TGG | - | contig247end:15141-15160 | MsG0080048230.01.T01:intron | 10.0% |
| !! | TATAGTTATAAATTACAATT+AGG | + | contig247end:15296-15315 | None:intergenic | 10.0% |
| !! | TTAAATTCATTGAAGATTAT+TGG | - | contig247end:16279-16298 | MsG0080048230.01.T01:five_prime_UTR | 15.0% |
| !!! | AATATCTATAATTGTTTTTG+AGG | - | contig247end:15207-15226 | MsG0080048230.01.T01:intron | 15.0% |
| !!! | ATATCTATAATTGTTTTTGA+GGG | - | contig247end:15208-15227 | MsG0080048230.01.T01:intron | 15.0% |
| !!! | TATTGTTAGCTTATTATATT+CGG | - | contig247end:14483-14502 | MsG0080048230.01.T01:three_prime_UTR | 15.0% |
| !! | GAAAAATGATAGAAAATTTC+AGG | + | contig247end:15347-15366 | None:intergenic | 20.0% |
| !!! | AAGAAAAATGGAAGTAATTT+TGG | - | contig247end:15153-15172 | MsG0080048230.01.T01:intron | 20.0% |
| !!! | ATTCCATAGTACTAATTTTT+AGG | - | contig247end:15035-15054 | MsG0080048230.01.T01:intron | 20.0% |
| !!! | CCAAAGTTTTAAATAAATAC+TGG | + | contig247end:15454-15473 | None:intergenic | 20.0% |
| !!! | CCAGTATTTATTTAAAACTT+TGG | - | contig247end:15451-15470 | MsG0080048230.01.T01:CDS | 20.0% |
| !!! | TAATTAATCAATGGATTTGT+TGG | - | contig247end:15938-15957 | MsG0080048230.01.T01:intron | 20.0% |
| !!! | TATCATACAATAGTTTTCTT+TGG | + | contig247end:15697-15716 | None:intergenic | 20.0% |
| !!! | TATCTATAATTGTTTTTGAG+GGG | - | contig247end:15209-15228 | MsG0080048230.01.T01:intron | 20.0% |
| !!! | TGATATTTTTTGTGAAATGT+TGG | + | contig247end:14129-14148 | None:intergenic | 20.0% |
| !!! | TGGTTAATCAATTTTTTTTG+AGG | - | contig247end:15958-15977 | MsG0080048230.01.T01:intron | 20.0% |
| ! | ATTCATTGAAGATTATTGGA+CGG | - | contig247end:16283-16302 | MsG0080048230.01.T01:five_prime_UTR | 25.0% |
| ! | GTACCTAAAAATTAGTACTA+TGG | + | contig247end:15041-15060 | None:intergenic | 25.0% |
| ! | TGATCAACACATGATTAATA+AGG | + | contig247end:15494-15513 | None:intergenic | 25.0% |
| ! | TTTCATCGTTTATTATTTGC+AGG | - | contig247end:14537-14556 | MsG0080048230.01.T01:three_prime_UTR | 25.0% |
| !! | ATGTGTTGATCAGTATTATT+TGG | - | contig247end:15502-15521 | MsG0080048230.01.T01:CDS | 25.0% |
| GATCATATACACAAAACATG+TGG | + | contig247end:16210-16229 | None:intergenic | 30.0% | |
| GCTTAAATTCTCTCATAAAG+AGG | - | contig247end:16142-16161 | MsG0080048230.01.T01:CDS | 30.0% | |
| TTATATTCGGAAAATCCTTG+AGG | - | contig247end:14496-14515 | MsG0080048230.01.T01:three_prime_UTR | 30.0% | |
| ! | CATCTCTGCTATTCTAAAAA+TGG | + | contig247end:16050-16069 | None:intergenic | 30.0% |
| !! | AAATGGCAAGAGTTTTTCAA+TGG | + | contig247end:16033-16052 | None:intergenic | 30.0% |
| !! | TAATTTTGAAGACTAGTGTC+AGG | - | contig247end:15547-15566 | MsG0080048230.01.T01:CDS | 30.0% |
| !!! | GTGTTTTGGTAAAATGGATA+GGG | - | contig247end:14828-14847 | MsG0080048230.01.T01:intron | 30.0% |
| AAAGTTTAGAAGTCTCTGCA+TGG | + | contig247end:15262-15281 | None:intergenic | 35.0% | |
| AAGCAATGTGTCATCTTGAT+TGG | + | contig247end:16126-16145 | None:intergenic | 35.0% | |
| GATCAATCTCAAACAGATCT+TGG | - | contig247end:15113-15132 | MsG0080048230.01.T01:intron | 35.0% | |
| GGAAGAGTTATAAACTGGAA+TGG | - | contig247end:15798-15817 | MsG0080048230.01.T01:CDS | 35.0% | |
| GGATTTGTCAAGTGATCATA+AGG | - | contig247end:14981-15000 | MsG0080048230.01.T01:intron | 35.0% | |
| GTTAGCAACTTCTTCATCAT+CGG | - | contig247end:14419-14438 | MsG0080048230.01.T01:three_prime_UTR | 35.0% | |
| TAGTTGCTAGCGTATGATAA+TGG | - | contig247end:15901-15920 | MsG0080048230.01.T01:intron | 35.0% | |
| TCTATTCTCATCAACTCATC+AGG | + | contig247end:15768-15787 | None:intergenic | 35.0% | |
| TTGATGAGAATAGAAGAAGC+TGG | - | contig247end:15774-15793 | MsG0080048230.01.T01:CDS | 35.0% | |
| ! | ATAGGTTTTACGATGAAGGA+GGG | - | contig247end:14655-14674 | MsG0080048230.01.T01:CDS | 35.0% |
| ! | TTTTGGTAAAATGGATAGGG+AGG | - | contig247end:14831-14850 | MsG0080048230.01.T01:intron | 35.0% |
| !! | GATTTCTTCGGTGTTTATGA+CGG | - | contig247end:14688-14707 | MsG0080048230.01.T01:intron | 35.0% |
| !!! | ATGGTTGTTTTTTGCATGCA+AGG | + | contig247end:14174-14193 | None:intergenic | 35.0% |
| !!! | GGTGTTTTGGTAAAATGGAT+AGG | - | contig247end:14827-14846 | MsG0080048230.01.T01:intron | 35.0% |
| ACAACCTCTATCGTATGGTT+CGG | - | contig247end:14582-14601 | MsG0080048230.01.T01:CDS | 40.0% | |
| ACCGGAGAAGGTTGAAAATT+CGG | - | contig247end:14280-14299 | MsG0080048230.01.T01:three_prime_UTR | 40.0% | |
| ATCAACGATAGGTTGTAGGA+AGG | - | contig247end:14606-14625 | MsG0080048230.01.T01:CDS | 40.0% | |
| ATGAGAATAGAAGAAGCTGG+TGG | - | contig247end:15777-15796 | MsG0080048230.01.T01:CDS | 40.0% | |
| CAACAACAACCTCTATCGTA+TGG | - | contig247end:14577-14596 | MsG0080048230.01.T01:CDS | 40.0% | |
| CTGGTGGAAGAGTTATAAAC+TGG | - | contig247end:15793-15812 | MsG0080048230.01.T01:CDS | 40.0% | |
| GAACATGAAACGACACTCAT+CGG | - | contig247end:14197-14216 | MsG0080048230.01.T01:three_prime_UTR | 40.0% | |
| GAGATTACATAGGATTGTGG+CGG | - | contig247end:14747-14766 | MsG0080048230.01.T01:intron | 40.0% | |
| GATAGGTTGTAGGAAGGAAA+TGG | - | contig247end:14612-14631 | MsG0080048230.01.T01:CDS | 40.0% | |
| GATCAGTCATCCAAGCAAAA+CGG | - | contig247end:14450-14469 | MsG0080048230.01.T01:three_prime_UTR | 40.0% | |
| GGAGAGATTACATAGGATTG+TGG | - | contig247end:14744-14763 | MsG0080048230.01.T01:intron | 40.0% | |
| TAACCAACCTATAGATCGTG+AGG | + | contig247end:15850-15869 | None:intergenic | 40.0% | |
| TCGACGAGAGATTCATGAAT+CGG | - | contig247end:14380-14399 | MsG0080048230.01.T01:three_prime_UTR | 40.0% | |
| TTGCAAGAACACCAAGAACA+CGG | + | contig247end:15827-15846 | None:intergenic | 40.0% | |
| TTGTTTGTACACAGCCAAAC+AGG | - | contig247end:15742-15761 | MsG0080048230.01.T01:CDS | 40.0% | |
| ! | GAATGATGGGGAATTTGAGT+GGG | - | contig247end:14789-14808 | MsG0080048230.01.T01:intron | 40.0% |
| ! | GATAGGTTTTACGATGAAGG+AGG | - | contig247end:14654-14673 | MsG0080048230.01.T01:CDS | 40.0% |
| ! | GGAGAGAAGTGTGATTTCTT+CGG | - | contig247end:14676-14695 | MsG0080048230.01.T01:intron | 40.0% |
| ! | GGAGATAGGTTTTACGATGA+AGG | - | contig247end:14651-14670 | MsG0080048230.01.T01:CDS | 40.0% |
| ! | TCCGAATTTTCAACCTTCTC+CGG | + | contig247end:14284-14303 | None:intergenic | 40.0% |
| ! | TGGAGAAGTATGGGAATGAT+GGG | - | contig247end:14776-14795 | MsG0080048230.01.T01:intron | 40.0% |
| !! | GTGTCGTTTCATGTTCTTCA+TGG | + | contig247end:14193-14212 | None:intergenic | 40.0% |
| !! | TATGGTTCGGTATCAACGAT+AGG | - | contig247end:14595-14614 | MsG0080048230.01.T01:CDS | 40.0% |
| !!! | GGAAGGGTGTTTTGGTAAAA+TGG | - | contig247end:14822-14841 | MsG0080048230.01.T01:intron | 40.0% |
| AGCAACTTCTTCATCATCGG+AGG | - | contig247end:14422-14441 | MsG0080048230.01.T01:three_prime_UTR | 45.0% | |
| AGGTTGTAGGAAGGAAATGG+AGG | - | contig247end:14615-14634 | MsG0080048230.01.T01:CDS | 45.0% | |
| ATCAACTCATCAGGCCTGTT+TGG | + | contig247end:15759-15778 | None:intergenic | 45.0% | |
| ATTACATAGGATTGTGGCGG+AGG | - | contig247end:14750-14769 | MsG0080048230.01.T01:intron | 45.0% | |
| ATTTGAGTGGGAGAGAGTGA+TGG | - | contig247end:14801-14820 | MsG0080048230.01.T01:intron | 45.0% | |
| CAACCTCACGATCTATAGGT+TGG | - | contig247end:15844-15863 | MsG0080048230.01.T01:CDS | 45.0% | |
| CGAAGCTGGAGAATATTCAC+CGG | - | contig247end:14262-14281 | MsG0080048230.01.T01:three_prime_UTR | 45.0% | |
| CGACGACGGTAGTTTAGAAA+CGG | - | contig247end:14350-14369 | MsG0080048230.01.T01:three_prime_UTR | 45.0% | |
| CGGTATCAACGATAGGTTGT+AGG | - | contig247end:14602-14621 | MsG0080048230.01.T01:CDS | 45.0% | |
| CGTGTAGGGAGAGATTACAT+AGG | - | contig247end:14737-14756 | MsG0080048230.01.T01:intron | 45.0% | |
| CGTTTCTAAACTACCGTCGT+CGG | + | contig247end:14352-14371 | None:intergenic | 45.0% | |
| CTTGCAACCTCACGATCTAT+AGG | - | contig247end:15840-15859 | MsG0080048230.01.T01:CDS | 45.0% | |
| GATACCGAACCATACGATAG+AGG | + | contig247end:14589-14608 | None:intergenic | 45.0% | |
| TGGAGAATATTCACCGGAGA+AGG | - | contig247end:14268-14287 | MsG0080048230.01.T01:three_prime_UTR | 45.0% | |
| TGGTAAAATGGATAGGGAGG+TGG | - | contig247end:14834-14853 | MsG0080048230.01.T01:intron | 45.0% | |
| TGTCAAGCAAAGATCCACGT+CGG | - | contig247end:14318-14337 | MsG0080048230.01.T01:three_prime_UTR | 45.0% | |
| ! | AAGTACCTCTCCGTTTTGCT+TGG | + | contig247end:14463-14482 | None:intergenic | 45.0% |
| ! | AGTTGTGGCGGTTGTTGTTA+AGG | - | contig247end:14894-14913 | MsG0080048230.01.T01:intron | 45.0% |
| ! | GGAATGATGGGGAATTTGAG+TGG | - | contig247end:14788-14807 | MsG0080048230.01.T01:intron | 45.0% |
| ! | GGAGAAGTATGGGAATGATG+GGG | - | contig247end:14777-14796 | MsG0080048230.01.T01:intron | 45.0% |
| ! | GTGGAGAAGTATGGGAATGA+TGG | - | contig247end:14775-14794 | MsG0080048230.01.T01:intron | 45.0% |
| !! | TTCGGTGTTTATGACGGTCA+TGG | - | contig247end:14694-14713 | MsG0080048230.01.T01:intron | 45.0% |
| !!! | AGAGTGATGGAAGGGTGTTT+TGG | - | contig247end:14814-14833 | MsG0080048230.01.T01:intron | 45.0% |
| !! | ATAATTAATTAATTAATCAA+TGG | - | contig247end:15929-15948 | MsG0080048230.01.T01:intron | 5.0% |
| !!! | TTTTCAATTTTAAAATTATT+TGG | - | contig247end:16237-16256 | MsG0080048230.01.T01:CDS | 5.0% |
| AAAATGGATAGGGAGGTGGC+TGG | - | contig247end:14838-14857 | MsG0080048230.01.T01:intron | 50.0% | |
| AACAACAACCGCCACAACTG+CGG | + | contig247end:14893-14912 | None:intergenic | 50.0% | |
| AATGGAGGATGCAGTGAGTG+TGG | - | contig247end:14630-14649 | MsG0080048230.01.T01:CDS | 50.0% | |
| AGCTTCGTAACTGCTCCAAC+CGG | + | contig247end:14249-14268 | None:intergenic | 50.0% | |
| CAAGAACACCAAGAACACGG+TGG | + | contig247end:15824-15843 | None:intergenic | 50.0% | |
| GATGCAGTGAGTGTGGAGAT+AGG | - | contig247end:14637-14656 | MsG0080048230.01.T01:CDS | 50.0% | |
| GCAAAGATCCACGTCGGAAA+TGG | - | contig247end:14324-14343 | MsG0080048230.01.T01:three_prime_UTR | 50.0% | |
| GCGATCGTTGTTGCAAACTG+TGG | - | contig247end:14919-14938 | MsG0080048230.01.T01:intron | 50.0% | |
| GGTGTTTATGACGGTCATGG+TGG | - | contig247end:14697-14716 | MsG0080048230.01.T01:intron | 50.0% | |
| GTCATCCAAGCAAAACGGAG+AGG | - | contig247end:14455-14474 | MsG0080048230.01.T01:three_prime_UTR | 50.0% | |
| TATGAGACGCACTGTCCTCA+AGG | + | contig247end:14514-14533 | None:intergenic | 50.0% | |
| TTCACCACCTCTTCCCAAGA+CGG | + | contig247end:14956-14975 | None:intergenic | 50.0% | |
| ! | AGTGGGAGAGAGTGATGGAA+GGG | - | contig247end:14806-14825 | MsG0080048230.01.T01:intron | 50.0% |
| ! | TGTGGCGGTTGTTGTTAAGG+AGG | - | contig247end:14897-14916 | MsG0080048230.01.T01:intron | 50.0% |
| !! | GGTGATTCTAGAGCCGTCTT+GGG | - | contig247end:14940-14959 | MsG0080048230.01.T01:intron | 50.0% |
| !! | TGGTGATTCTAGAGCCGTCT+TGG | - | contig247end:14939-14958 | MsG0080048230.01.T01:intron | 50.0% |
| CAACCGGAGAATCCACTCGT+CGG | + | contig247end:14233-14252 | None:intergenic | 55.0% | |
| CACAACTGCGGTAGATCCCA+CGG | + | contig247end:14881-14900 | None:intergenic | 55.0% | |
| GGAATCTTCTCTCCGACGAG+TGG | - | contig247end:14218-14237 | MsG0080048230.01.T01:three_prime_UTR | 55.0% | |
| GGGAAGAGGTGGTGAAGCTT+TGG | - | contig247end:14960-14979 | MsG0080048230.01.T01:intron | 55.0% | |
| GGTTGGAGCAGTTACGAAGC+TGG | - | contig247end:14248-14267 | MsG0080048230.01.T01:three_prime_UTR | 55.0% | |
| TGGAATGGCCACCGTGTTCT+TGG | - | contig247end:15813-15832 | MsG0080048230.01.T01:CDS | 55.0% | |
| ! | ACATAGGATTGTGGCGGAGG+AGG | - | contig247end:14753-14772 | MsG0080048230.01.T01:intron | 55.0% |
| ! | CGGAGGAGGTGGAGAAGTAT+GGG | - | contig247end:14767-14786 | MsG0080048230.01.T01:intron | 55.0% |
| ! | GAGTGGGAGAGAGTGATGGA+AGG | - | contig247end:14805-14824 | MsG0080048230.01.T01:intron | 55.0% |
| ! | TCTAGAGCCGTCTTGGGAAG+AGG | - | contig247end:14946-14965 | MsG0080048230.01.T01:intron | 55.0% |
| ! | TCTCCGACGAGTGGATTCTC+CGG | - | contig247end:14227-14246 | MsG0080048230.01.T01:three_prime_UTR | 55.0% |
| AGAGCCGTCTTGGGAAGAGG+TGG | - | contig247end:14949-14968 | MsG0080048230.01.T01:intron | 60.0% | |
| AGATCCCACGGTCCTAACCG+TGG | + | contig247end:14869-14888 | None:intergenic | 60.0% | |
| CGTGGGATCTACCGCAGTTG+TGG | - | contig247end:14879-14898 | MsG0080048230.01.T01:intron | 60.0% | |
| GATGCCACGGTTAGGACCGT+GGG | - | contig247end:14862-14881 | MsG0080048230.01.T01:intron | 60.0% | |
| GCGGAGGAGGTGGAGAAGTA+TGG | - | contig247end:14766-14785 | MsG0080048230.01.T01:intron | 60.0% | |
| GGGATCTACCGCAGTTGTGG+CGG | - | contig247end:14882-14901 | MsG0080048230.01.T01:intron | 60.0% | |
| GTCGGAAATGGCTCCGACGA+CGG | - | contig247end:14336-14355 | MsG0080048230.01.T01:three_prime_UTR | 60.0% | |
| TGATGCCACGGTTAGGACCG+TGG | - | contig247end:14861-14880 | MsG0080048230.01.T01:intron | 60.0% | |
| ! | CGACGAGTGGATTCTCCGGT+TGG | - | contig247end:14231-14250 | MsG0080048230.01.T01:three_prime_UTR | 60.0% |
| ! | TAGGATTGTGGCGGAGGAGG+TGG | - | contig247end:14756-14775 | MsG0080048230.01.T01:intron | 60.0% |
| ! | TCATGGTGGTGCTCAGGTGG+CGG | - | contig247end:14711-14730 | MsG0080048230.01.T01:intron | 60.0% |
| ! | TGACGGTCATGGTGGTGCTC+AGG | - | contig247end:14705-14724 | MsG0080048230.01.T01:intron | 60.0% |
| ! | TGGCTGGTGATGCCACGGTT+AGG | - | contig247end:14854-14873 | MsG0080048230.01.T01:intron | 60.0% |
| CGTCGGAGCCATTTCCGACG+TGG | + | contig247end:14335-14354 | None:intergenic | 65.0% | |
| ! | CGGTCATGGTGGTGCTCAGG+TGG | - | contig247end:14708-14727 | MsG0080048230.01.T01:intron | 65.0% |
| ! | GGAGGTGGCTGGTGATGCCA+CGG | - | contig247end:14849-14868 | MsG0080048230.01.T01:intron | 65.0% |
| !! | TCAGGTGGCGGAGGCGTGTA+GGG | - | contig247end:14723-14742 | MsG0080048230.01.T01:intron | 65.0% |
| ! | TGGTGGTGCTCAGGTGGCGG+AGG | - | contig247end:14714-14733 | MsG0080048230.01.T01:intron | 70.0% |
| !! | CTCAGGTGGCGGAGGCGTGT+AGG | - | contig247end:14722-14741 | MsG0080048230.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig247end | gene | 14125 | 16324 | 14125 | ID=MsG0080048230.01;Name=MsG0080048230.01 |
| contig247end | mRNA | 14125 | 16324 | 14125 | ID=MsG0080048230.01.T01;Parent=MsG0080048230.01;Name=MsG0080048230.01.T01;_AED=0.43;_eAED=0.43;_QI=52|1|1|1|1|1|3|443|289 |
| contig247end | exon | 15973 | 16324 | 15973 | ID=MsG0080048230.01.T01:exon:422;Parent=MsG0080048230.01.T01 |
| contig247end | exon | 15447 | 15890 | 15447 | ID=MsG0080048230.01.T01:exon:423;Parent=MsG0080048230.01.T01 |
| contig247end | exon | 14125 | 14693 | 14125 | ID=MsG0080048230.01.T01:exon:424;Parent=MsG0080048230.01.T01 |
| contig247end | five_prime_UTR | 16273 | 16324 | 16273 | ID=MsG0080048230.01.T01:five_prime_utr;Parent=MsG0080048230.01.T01 |
| contig247end | CDS | 15973 | 16272 | 15973 | ID=MsG0080048230.01.T01:cds;Parent=MsG0080048230.01.T01 |
| contig247end | CDS | 15447 | 15890 | 15447 | ID=MsG0080048230.01.T01:cds;Parent=MsG0080048230.01.T01 |
| contig247end | CDS | 14568 | 14693 | 14568 | ID=MsG0080048230.01.T01:cds;Parent=MsG0080048230.01.T01 |
| contig247end | three_prime_UTR | 14125 | 14567 | 14125 | ID=MsG0080048230.01.T01:three_prime_utr;Parent=MsG0080048230.01.T01 |
| Gene Sequence |
| Protein sequence |
