AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010945.01


Find 221 sgRNAs with CRISPR-Local

Find 765 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
Chr2 gene 77439249 77449855 77439249 ID=MsG0280010945.01;Name=MsG0280010945.01
Chr2 mRNA 77439249 77449855 77439249 ID=MsG0280010945.01.T01;Parent=MsG0280010945.01;Name=MsG0280010945.01.T01;_AED=0.41;_eAED=0.63;_QI=0|0.27|0.33|1|1|1|12|316|977
Chr2 exon 77439249 77440622 77439249 ID=MsG0280010945.01.T01:exon:11421;Parent=MsG0280010945.01.T01
Chr2 exon 77441317 77441551 77441317 ID=MsG0280010945.01.T01:exon:11420;Parent=MsG0280010945.01.T01
Chr2 exon 77441643 77441853 77441643 ID=MsG0280010945.01.T01:exon:11419;Parent=MsG0280010945.01.T01
Chr2 exon 77441961 77442033 77441961 ID=MsG0280010945.01.T01:exon:11418;Parent=MsG0280010945.01.T01
Chr2 exon 77442156 77442266 77442156 ID=MsG0280010945.01.T01:exon:11417;Parent=MsG0280010945.01.T01
Chr2 exon 77443345 77443484 77443345 ID=MsG0280010945.01.T01:exon:11416;Parent=MsG0280010945.01.T01
Chr2 exon 77447429 77447574 77447429 ID=MsG0280010945.01.T01:exon:11415;Parent=MsG0280010945.01.T01
Chr2 exon 77448154 77448266 77448154 ID=MsG0280010945.01.T01:exon:11414;Parent=MsG0280010945.01.T01
Chr2 exon 77448348 77448442 77448348 ID=MsG0280010945.01.T01:exon:11413;Parent=MsG0280010945.01.T01
Chr2 exon 77448586 77448898 77448586 ID=MsG0280010945.01.T01:exon:11412;Parent=MsG0280010945.01.T01
Chr2 CDS 77449559 77449855 77449559 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 CDS 77449278 77449419 77449278 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 CDS 77448586 77448898 77448586 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 CDS 77448348 77448442 77448348 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 CDS 77448154 77448266 77448154 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 CDS 77447429 77447574 77447429 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 CDS 77443345 77443484 77443345 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 CDS 77442156 77442266 77442156 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 CDS 77441961 77442033 77441961 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 CDS 77441643 77441853 77441643 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 CDS 77441317 77441551 77441317 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 CDS 77439565 77440622 77439565 ID=MsG0280010945.01.T01:cds;Parent=MsG0280010945.01.T01
Chr2 three_prime_UTR 77439249 77439564 77439249 ID=MsG0280010945.01.T01:three_prime_utr;Parent=MsG0280010945.01.T01
Chr2 mRNA 77448588 77449855 77448588 ID=MsG0280010945.01.T02;Parent=MsG0280010945.01;Name=MsG0280010945.01.T02;_AED=0.48;_eAED=1.00;_QI=0|0|0|1|1|0.66|3|0|250
Chr2 exon 77448588 77448898 77448588 ID=MsG0280010945.01.T02:exon:11422;Parent=MsG0280010945.01.T02
Chr2 CDS 77449559 77449855 77449559 ID=MsG0280010945.01.T02:cds;Parent=MsG0280010945.01.T02
Chr2 CDS 77449278 77449419 77449278 ID=MsG0280010945.01.T02:cds;Parent=MsG0280010945.01.T02
Chr2 CDS 77448588 77448898 77448588 ID=MsG0280010945.01.T02:cds;Parent=MsG0280010945.01.T02
Gene Sequence

>MsG0280010945.01.T02

ATGGCATCATCAAGCTCAAAAGTTTCAGAATCTACATCAAACAAGCAAAGCGTATCAGAATCTGGGTCCATCTACAAAGAGAAGACTATGGATATTCCATGGGAATCCTTAATAGTTCAAGTAGAGTCACCGGTGGATTTTGCTTCACTCAAGAAGTATGAAGTAAACATGGAAGGTTTGATAGAAACTCAGATGATGTCTGAGTATTTCAAGATGCTAAATGGGCCAACATATGTGAACTTGGTCAAGGATTTTTGGTTAAAAGCTGAAGTGTACAATGAAAAGCCTGCAAAAGTCGATGCATGCAGAGGGAAGATTCCAAGAAATAGTCAGGAAGGAAGATGTCCTGCTAAAAGGTTACTACAACTCTCTTCTGGGTGGGAAGAAAGATGCAAGCCTTCTGAAATGGAGATTCACAACAGGATGTTGGTGAAATTCAGGACTTTCCTCATCTTTAAGGAAAGTGACTCTGATTTCCTAGTTCAATCAGTAGCTGAGTACGTCTTGGAGGAAGCTGCTCATGCTAAAGGGAAAGGCAAGAAGGCCAAGGCAGTTGCTGTGTCAGAAGCTGCTGTTTCTGATGCACCTGAGGGAAAAGGACCAGAACTAGTTCTGAATCAGAAGCTGCTCCTACTAAAGGAAAGAAGGCCAGAACTAGTACTGAGTCAGAAGCTGCTAAAACTGTTTCTATCAAGGAAAAGGAAAGATGCAGAAGGTTGGTGCTGCTTCTATTCCACAGAAGAGGAGAAA

>MsG0280010945.01.T01

ATGGCATCATCAAGCTCAAAAGTTTCAGAATCTACATCAAACAAGCAAAGCGTATCAGAATCTGGGTCCATCTACAAAGAGAAGACTATGGATATTCCATGGGAATCCTTAATAGTTCAAGTAGAGTCACCGGTGGATTTTGCTTCACTCAAGAAGTATGAAGTAAACATGGAAGGTTTGATAGAAACTCAGATGATGTCTGAGTATTTCAAGATGCTAAATGGGCCAACATATGTGAACTTGGTCAAGGATTTTTGGTTAAAAGCTGAAGTGTACAATGAAAAGCCTGCAAAAGTCGATGCATGCAGAGGGAAGATTCCAAGAAATAGTCAGGAAGGAAGATGTCCTGCTAAAAGGTTACTACAACTCTCTTCTGGGTGGGAAGAAAGATGCAAGCCTTCTGAAATGGAGATTCACAACAGGATGTTGGTGAAATTCAGGACTTTCCTCATCTTTAAGGAAAGTGACTCTGATTTCCTAGTTCAATCAGTAGCTGAGTACGTCTTGGAGGAAGCTGCTCATGCTAAAGGGAAAGGCAAGAAGGCCAAGGCAGTTGCTGTGTCAGAAGCTGCTGTTTCTGATGCACCTGAGGGAAAAGGACCAGAACTAGTTCTGAATCAGAAGCTGCTCCTACTAAAGGAAAGAAGGCCAGAACTAGTACTGAGTCAGAAGCTGCTAAAACTGTTTCTATCAAGGAAAAGGAAAGATGCAGAAGGTTGGTGCTGCTTCTATTCCACAGAAGAGGAGAAAAGGATGGCAGATGAACGTGCTTCTGAACTTATTTCAGACAACAAGGATCTAAAAGCACAATACACTCATCAAAGAGATGAAAAGCTCAAGGCCTTGGGAAGACGATATGATGCTCATTTTGAAAATGCTCCAGAAGAGGGAACTTCAGAAGCAGTTCCCAATCTGCTGAGTCCACAGAAGATCACTTCTGAAGCTGGCCCTGCAGATCAGATGCATAATCTGGTGGATCAAAGAAGGACAATTGATCTCACAGGTGCATATGAAGACTCCTGGGCATCTCTTCAGAACCGGGCAGCTGGCTTATTGAAGAAATCAAGGCTAAATGCATCAGAGTCAAGCAAGCTTCAGTCAGAAGGAGTGATTTTAGAGATATTAGGAATTGAAGATGGTTCTGAAGCCAGCAAGAAAAAAGCTGCTCAGAAGAAGGCTGCCGCCGCTGCAAAGAGAGGAGGGAGGTTGCCGCCACGCTTCATCGAAAAAGGCTTCGGAGAAGGCGCTAGCGGGGTGCGTGCATGTATTGACAATAGTCAAGCAGTTGGGCTGGTAGCAATGGCTTTCTACCATGTAGCCCATGTCAAATCTCTGGTTATGAATCCTTCAGAGGTAGATAGAATCTTATCAGTTACTTTCCATGGACATGATCTAATAGTTGATTCTGAGTTGGAGCTAAATTATGGAAGACGTTATGGTTTGCTTGGATTGAACGGCTGTGGAAAATCTACGCTACTTACAGCAATAGGTTGCCGTGAGCTTCCTATTCCAGACCACATGGATATTTATCACCTTAGCCGGGAAATTGAAGCCTCTGACATGTCTGCGTTGGAGGCTGTCATTAGTTGTGACGAGGAAAGGTTGAAATTGGAGAAAGAAGCTGAAATTCTGGGAGCACAGGAGGATGGTGGTGGTGAAGCACTTGAACGAGTTTTTGAACGGCTGGAAGCTATGGATGCATCAACTGCCGAAAAGCGTGCTGCTGAAATTTTATTTGGTCTTGGTTTCAACAAGCAGATGCAGGCAAAGAAGACACGTGATTTTTCTGGTGGATGGAGAATGAGGATTGCTTTAGCACGAGCCCTGTTTATGAACCCAACCATTCTTCTACTTGACGAACCTACAAATCACCTTGATTTGGAAGCATGTGTGTGGCTGGAGGAGAATTTGAAGAAATTTGACCGTATTTTGGTTGTGATTTCACACTCCCAAGATTTCCTTAATGGTGTCTGCACAAATATCATCCACATGCAAAACAAAAAGCTGAAGTTCTATACTGGTAATTATGATCAATATGTTCAGACACGTGCTGAACTGGAAGAGAACCAGATGAAGCAGTACAGGTGGGAGCAGGAGCAGATTGCCTCAATGAAGGAATACATTGCACGATTTGGCCATGGATCAGCAAAACTAGCTCGCCAAGCTCAGAGTAAAGAGAAGACTCTTGCAAAAATGGAGCGCGGTGGACTTACAGAGAAGGTGGTAAGAGACAAAATTTTAGTTTTCCGCTTTGTTGATGTGGGGAAACTTCCCCCACCTGTTCTCCAGTTTGTGGAGGTGACATTTGGCTACACTCCTGATAATCTCATCTACAAGAACATCGACTTCGGGGTCGATTTAGACTCCAGGATTGCTCTGGTTGGACCCAATGGAGCTGGGAAGAGCACGTTCCTGAAGCTTATGACAGGTGATTTGGTTCCTTTAGATGGCATGGTTCGTCGCCATAATCACCTTCGCATTGCACAATTTCACCAGCACTTGACTGAAAAACTAGACTTGGAACTGTCTGCTCTCCAGTTTATGATAAAAGAGTACCCTGGAAATGAGGAAGAAAGGATGAGAGCAGCTATTGGGAAGTTTGGATTGTCGGGTAAAGCACAGGTGATGCCTATGAGAAATTTATCGGATGGACAAAGGAGTCGCGTGATCTTTGCATGGTTAGCCTATAGACAGCCTCACTTGCTGCTATTAGATGAACCAACTAATCATTTAGATATCGAGACAATTGACTCGTTAGCCGAGGCATTGAATGAATGGGATGGTGGCATGGTTCTGGTTAGTCATGATTTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTGTGTGCTGATCAAACAGTGACCAGATGGGAAGGTGATATTATGGATTTCAAGCTGCACCTAAAGGAAAAGGCGGGTTTATCTGACTGA

Protein sequence

>MsG0280010945.01.T02

MASSSSKVSESTSNKQSVSESGSIYKEKTMDIPWESLIVQVESPVDFASLKKYEVNMEGLIETQMMSEYFKMLNGPTYVNLVKDFWLKAEVYNEKPAKVDACRGKIPRNSQEGRCPAKRLLQLSSGWEERCKPSEMEIHNRMLVKFRTFLIFKESDSDFLVQSVAEYVLEEAAHAKGKGKKAKAVAVSEAAVSDAPEGKGPELVLNQKLLLLKERRPELVLSQKLLKLFLSRKRKDAEGWCCFYSTEEEK

>MsG0280010945.01.T01

MASSSSKVSESTSNKQSVSESGSIYKEKTMDIPWESLIVQVESPVDFASLKKYEVNMEGLIETQMMSEYFKMLNGPTYVNLVKDFWLKAEVYNEKPAKVDACRGKIPRNSQEGRCPAKRLLQLSSGWEERCKPSEMEIHNRMLVKFRTFLIFKESDSDFLVQSVAEYVLEEAAHAKGKGKKAKAVAVSEAAVSDAPEGKGPELVLNQKLLLLKERRPELVLSQKLLKLFLSRKRKDAEGWCCFYSTEEEKRMADERASELISDNKDLKAQYTHQRDEKLKALGRRYDAHFENAPEEGTSEAVPNLLSPQKITSEAGPADQMHNLVDQRRTIDLTGAYEDSWASLQNRAAGLLKKSRLNASESSKLQSEGVILEILGIEDGSEASKKKAAQKKAAAAAKRGGRLPPRFIEKGFGEGASGVRACIDNSQAVGLVAMAFYHVAHVKSLVMNPSEVDRILSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSALEAVISCDEERLKLEKEAEILGAQEDGGGEALERVFERLEAMDASTAEKRAAEILFGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNYDQYVQTRAELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDKILVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDLDSRIALVGPNGAGKSTFLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLELSALQFMIKEYPGNEEERMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQTVTRWEGDIMDFKLHLKEKAGLSD*