AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048953.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048953.01.T01 MTR_7g075890 93.301 627 13 2 4 629 302 900 0.0 1185
MsG0080048953.01.T01 MTR_8g033150 71.132 627 152 2 4 629 156 754 0.0 933
MsG0080048953.01.T01 MTR_8g033150 71.132 627 152 2 4 629 129 727 0.0 932
MsG0080048953.01.T01 MTR_8g079900 69.120 625 164 2 4 627 146 742 0.0 920
MsG0080048953.01.T01 MTR_8g079900 69.120 625 164 2 4 627 48 644 0.0 916
MsG0080048953.01.T01 MTR_7g104200 47.227 631 298 8 4 629 144 744 0.0 562
MsG0080048953.01.T01 MTR_4g134320 38.760 645 341 12 4 626 153 765 5.46e-144 437
MsG0080048953.01.T01 MTR_7g034380 41.429 630 318 14 4 626 106 691 1.07e-142 431
MsG0080048953.01.T01 MTR_4g103400 40.180 667 320 18 4 629 151 779 2.62e-142 432
MsG0080048953.01.T01 MTR_6g075370 39.708 617 279 11 4 613 143 673 1.32e-141 428
MsG0080048953.01.T01 MTR_3g082200 38.838 654 331 15 3 626 17 631 2.64e-141 425
MsG0080048953.01.T01 MTR_3g082200 38.897 653 330 15 4 626 33 646 1.91e-140 424
MsG0080048953.01.T01 MTR_4g103495 40.701 656 323 20 3 626 2 623 1.01e-139 421
MsG0080048953.01.T01 MTR_3g082200 38.838 654 329 15 4 626 156 769 2.35e-139 425
MsG0080048953.01.T01 MTR_6g055570 41.213 643 303 17 4 628 146 731 3.19e-139 423
MsG0080048953.01.T01 MTR_7g098070 37.771 646 345 14 4 626 150 761 7.62e-138 421
MsG0080048953.01.T01 MTR_5g096750 39.450 654 320 19 4 626 156 764 4.58e-137 419
MsG0080048953.01.T01 MTR_3g061110 38.235 646 330 14 4 626 153 752 1.93e-136 417
MsG0080048953.01.T01 MTR_4g103480 39.605 659 328 16 4 629 168 789 1.99e-136 418
MsG0080048953.01.T01 MTR_5g055920 39.422 657 334 15 3 629 47 669 2.40e-136 414
MsG0080048953.01.T01 MTR_4g103450 39.605 659 328 16 4 629 125 746 7.90e-136 415
MsG0080048953.01.T01 MTR_4g073540 40.385 676 308 22 4 628 138 769 1.81e-135 415
MsG0080048953.01.T01 MTR_8g005710 39.750 639 327 13 4 628 106 700 2.88e-135 412
MsG0080048953.01.T01 MTR_2g042130 39.877 652 322 18 4 624 158 770 5.81e-135 414
MsG0080048953.01.T01 MTR_4g103430 39.482 656 326 17 4 626 151 768 2.11e-133 409
MsG0080048953.01.T01 MTR_3g010080 40.506 632 322 13 4 626 145 731 2.88e-133 408
MsG0080048953.01.T01 MTR_6g055410 39.873 632 309 15 4 628 146 713 3.79e-133 407
MsG0080048953.01.T01 MTR_8g072440 39.877 652 313 19 4 626 109 710 1.18e-132 405
MsG0080048953.01.T01 MTR_4g103490 38.633 673 331 18 1 629 152 786 1.84e-132 407
MsG0080048953.01.T01 MTR_8g022870 40.211 664 326 17 4 626 142 775 4.81e-132 406
MsG0080048953.01.T01 MTR_8g072440 39.877 652 313 19 4 626 151 752 4.93e-132 405
MsG0080048953.01.T01 MTR_1g007030 39.905 634 329 15 1 626 143 732 3.11e-130 400
MsG0080048953.01.T01 MTR_1g048110 39.055 635 325 16 4 626 146 730 3.61e-130 400
MsG0080048953.01.T01 MTR_5g016120 40.335 657 318 19 4 626 144 760 8.95e-130 400
MsG0080048953.01.T01 MTR_7g075900 38.991 654 331 17 4 626 155 771 2.33e-129 399
MsG0080048953.01.T01 MTR_1g102350 38.602 658 336 17 4 629 159 780 3.01e-129 399
MsG0080048953.01.T01 MTR_8g006680 38.871 638 316 16 4 626 144 722 4.64e-129 397
MsG0080048953.01.T01 MTR_8g005300 38.871 638 316 16 4 626 144 722 4.64e-129 397
MsG0080048953.01.T01 MTR_8g005640 38.871 638 316 16 4 626 144 722 4.64e-129 397
MsG0080048953.01.T01 MTR_4g095360 38.675 649 339 15 4 626 139 754 8.48e-129 397
MsG0080048953.01.T01 MTR_0047s0120 41.041 653 315 19 4 624 140 754 1.38e-128 396
MsG0080048953.01.T01 MTR_8g083220 37.727 660 331 14 4 626 158 774 4.69e-128 395
MsG0080048953.01.T01 MTR_8g042670 39.319 646 330 17 4 626 27 633 9.47e-127 388
MsG0080048953.01.T01 MTR_1g006990 39.685 635 325 16 4 626 146 734 2.08e-126 390
MsG0080048953.01.T01 MTR_5g025010 38.450 658 316 18 4 626 114 717 4.13e-126 389
MsG0080048953.01.T01 MTR_5g011280 38.190 652 318 16 4 626 160 755 8.80e-126 389
MsG0080048953.01.T01 MTR_4g103495 40.357 617 304 19 1 587 149 731 9.24e-126 389
MsG0080048953.01.T01 MTR_5g025010 38.450 658 316 18 4 626 146 749 1.53e-125 389
MsG0080048953.01.T01 MTR_3g104930 39.571 652 330 18 4 626 145 761 2.26e-125 388
MsG0080048953.01.T01 MTR_3g114420 40.487 657 316 22 4 626 149 764 3.20e-125 388
MsG0080048953.01.T01 MTR_8g042670 39.564 642 326 17 4 622 151 753 3.48e-125 387
MsG0080048953.01.T01 MTR_7g081420 38.552 677 321 25 4 628 153 786 1.15e-124 387
MsG0080048953.01.T01 MTR_7g098630 38.462 663 326 17 4 627 142 761 5.15e-124 388
MsG0080048953.01.T01 MTR_4g102400 39.450 654 309 20 4 626 155 752 7.02e-124 384
MsG0080048953.01.T01 MTR_8g042710 39.036 643 342 15 4 622 143 759 7.70e-123 382
MsG0080048953.01.T01 MTR_4g053630 38.785 642 341 19 4 624 40 650 3.57e-122 377
MsG0080048953.01.T01 MTR_4g053630 38.785 642 341 19 4 624 117 727 2.38e-121 377
MsG0080048953.01.T01 MTR_7g081580 37.688 666 341 22 4 628 153 785 4.00e-121 378
MsG0080048953.01.T01 MTR_7g081380 36.978 695 329 19 4 628 153 808 3.26e-120 376
MsG0080048953.01.T01 MTR_7g081750 35.912 685 344 21 3 628 151 799 5.92e-120 375
MsG0080048953.01.T01 MTR_8g021130 37.500 664 337 19 1 624 147 772 9.57e-119 372
MsG0080048953.01.T01 MTR_7g081500 37.910 670 336 22 3 628 151 784 6.33e-118 369
MsG0080048953.01.T01 MTR_3g464790 39.280 639 305 17 21 626 143 731 4.90e-117 365
MsG0080048953.01.T01 MTR_4g125180 37.234 658 334 21 4 624 134 749 5.17e-117 366
MsG0080048953.01.T01 MTR_4g053635 38.037 652 329 22 4 624 63 670 1.66e-116 362
MsG0080048953.01.T01 MTR_7g481600 36.527 668 346 20 4 628 153 785 3.09e-116 366
MsG0080048953.01.T01 MTR_1g018510 37.026 659 346 16 4 626 100 725 1.41e-113 357
MsG0080048953.01.T01 MTR_3g102810 36.433 656 352 17 3 626 132 754 1.51e-112 355
MsG0080048953.01.T01 MTR_5g011270 37.596 649 322 16 4 626 160 751 2.79e-112 354
MsG0080048953.01.T01 MTR_5g011320 36.963 652 332 19 4 628 149 748 4.36e-112 353
MsG0080048953.01.T01 MTR_5g085690 36.036 666 353 19 4 626 153 788 5.45e-112 354
MsG0080048953.01.T01 MTR_1g078110 36.907 653 331 20 4 626 152 753 9.24e-112 353
MsG0080048953.01.T01 MTR_5g011340 36.350 652 337 18 4 628 153 753 2.08e-111 352
MsG0080048953.01.T01 MTR_2g018135 36.295 664 345 20 4 626 156 782 2.35e-111 352
MsG0080048953.01.T01 MTR_5g011190 36.000 650 337 18 4 626 156 753 2.47e-111 351
MsG0080048953.01.T01 MTR_5g011260 37.249 647 327 16 4 626 160 751 2.81e-111 351
MsG0080048953.01.T01 MTR_5g011310 36.183 655 334 21 4 628 156 756 7.01e-110 348
MsG0080048953.01.T01 MTR_7g079310 36.515 660 333 21 4 626 153 763 1.13e-109 347
MsG0080048953.01.T01 MTR_5g011370 36.000 650 342 18 4 628 176 776 1.32e-109 347
MsG0080048953.01.T01 MTR_8g024380 36.115 659 332 20 4 626 153 758 3.88e-109 346
MsG0080048953.01.T01 MTR_2g018125 35.832 667 343 18 4 626 158 783 9.53e-109 345
MsG0080048953.01.T01 MTR_7g079300 36.641 655 338 23 4 626 156 765 1.70e-108 344
MsG0080048953.01.T01 MTR_3g452290 36.292 631 290 15 3 628 47 570 9.10e-107 334
MsG0080048953.01.T01 MTR_3g451220 36.292 631 290 15 3 628 47 570 9.10e-107 334
MsG0080048953.01.T01 MTR_8g024420 35.703 661 342 20 4 629 112 724 2.00e-106 338
MsG0080048953.01.T01 MTR_2g044630 36.407 629 334 14 4 627 139 706 3.57e-106 337
MsG0080048953.01.T01 MTR_2g049200 37.117 652 339 18 4 626 146 755 9.28e-106 337
MsG0080048953.01.T01 MTR_1g079120 35.627 654 347 19 4 626 150 760 1.88e-105 336
MsG0080048953.01.T01 MTR_8g024390 34.046 655 363 19 4 629 146 760 1.86e-104 333
MsG0080048953.01.T01 MTR_7g118080 34.909 656 342 19 4 626 152 755 4.00e-102 327
MsG0080048953.01.T01 MTR_3g114410 41.489 470 216 10 4 452 149 580 1.59e-97 310
MsG0080048953.01.T01 MTR_2g042640 36.735 588 273 14 1 583 112 605 1.87e-95 306
MsG0080048953.01.T01 MTR_8g042710 41.996 481 236 11 4 464 143 600 1.45e-93 302
MsG0080048953.01.T01 MTR_8g024370 33.483 666 349 23 4 626 142 756 7.24e-89 292
MsG0080048953.01.T01 MTR_4g071560 41.728 405 207 10 95 477 143 540 1.32e-87 283
MsG0080048953.01.T01 MTR_2g042650 33.651 630 303 17 1 626 124 642 2.09e-84 278
MsG0080048953.01.T01 MTR_5g081100 40.568 387 170 11 4 384 92 424 2.03e-75 248
MsG0080048953.01.T01 MTR_2g037850 31.025 693 359 25 4 624 166 811 1.24e-67 236
MsG0080048953.01.T01 MTR_8g027260 39.755 327 183 5 306 628 337 653 2.44e-64 224
MsG0080048953.01.T01 MTR_8g027260 46.352 233 87 4 4 235 146 341 6.57e-52 190
MsG0080048953.01.T01 MTR_4g127480 30.655 672 369 25 26 625 166 812 1.17e-63 225
MsG0080048953.01.T01 MTR_4g132620 30.546 586 316 18 68 582 206 771 3.47e-57 207
MsG0080048953.01.T01 MTR_2g046740 28.429 700 382 21 4 628 186 841 1.49e-52 194
MsG0080048953.01.T01 MTR_4g126230 40.909 220 128 2 337 555 30 248 4.96e-51 177
MsG0080048953.01.T01 MTR_8g089230 27.977 697 383 24 4 626 194 845 1.77e-50 188
MsG0080048953.01.T01 MTR_2g070250 36.464 362 168 9 15 373 100 402 1.96e-50 180
MsG0080048953.01.T01 MTR_5g081280 43.556 225 80 6 4 225 117 297 2.44e-47 169
MsG0080048953.01.T01 MTR_2g070260 39.810 211 120 4 421 627 1 208 6.52e-43 154
MsG0080048953.01.T01 MTR_7g079295 43.220 236 106 6 4 236 155 365 1.88e-39 152
MsG0080048953.01.T01 MTR_7g079295 32.075 159 100 3 471 626 356 509 1.57e-15 80.1
MsG0080048953.01.T01 MTR_3g114160 42.570 249 113 9 106 330 118 360 7.79e-39 147
MsG0080048953.01.T01 MTR_3g114140 45.562 169 59 4 71 235 12 151 5.69e-31 126
MsG0080048953.01.T01 MTR_3g114140 36.555 238 135 7 361 587 191 423 8.43e-30 122
MsG0080048953.01.T01 MTR_5g081130 39.326 178 103 3 450 627 1 173 1.23e-30 119
MsG0080048953.01.T01 MTR_8g092940 42.442 172 64 5 4 175 99 235 8.46e-30 118
MsG0080048953.01.T01 MTR_4g053665 31.837 245 130 8 380 624 1 208 1.17e-25 105
MsG0080048953.01.T01 MTR_3g065240 25.455 385 156 11 137 517 7 264 3.69e-23 100
MsG0080048953.01.T01 MTR_5g044060 42.276 123 61 1 362 474 14 136 1.46e-20 90.1
MsG0080048953.01.T01 MTR_7g081660 32.934 167 98 5 466 628 398 554 1.75e-15 80.1
MsG0080048953.01.T01 MTR_5g079315 49.315 73 33 2 154 222 2 74 9.24e-13 64.3
MsG0080048953.01.T01 MTR_5g011300 38.095 84 44 1 421 496 1 84 1.33e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048953.01.T01 AT4G00230 64.331 628 194 3 4 629 147 746 0.0 813
MsG0080048953.01.T01 AT4G00230 63.656 465 140 2 4 467 147 583 0.0 573
MsG0080048953.01.T01 AT5G03620 45.820 646 298 10 4 628 146 760 0.0 543
MsG0080048953.01.T01 AT5G59190 43.218 634 301 15 4 627 105 689 6.36e-157 468
MsG0080048953.01.T01 AT5G59100 41.746 630 324 11 4 627 146 738 1.97e-153 460
MsG0080048953.01.T01 AT5G59120 42.089 632 312 13 4 627 143 728 1.21e-149 450
MsG0080048953.01.T01 AT5G59090 41.297 632 317 13 4 627 142 727 2.66e-147 444
MsG0080048953.01.T01 AT5G59090 41.297 632 317 13 4 627 144 729 2.92e-147 444
MsG0080048953.01.T01 AT5G59090 41.429 630 314 13 4 627 144 724 8.42e-147 442
MsG0080048953.01.T01 AT3G46850 40.659 637 319 16 4 627 145 735 1.39e-146 442
MsG0080048953.01.T01 AT2G04160 41.194 653 317 18 4 626 155 770 5.92e-144 437
MsG0080048953.01.T01 AT5G58830 40.476 630 301 12 4 627 145 706 7.56e-143 432
MsG0080048953.01.T01 AT3G46840 41.325 634 318 15 4 627 146 735 3.28e-140 426
MsG0080048953.01.T01 AT5G59130 40.981 632 313 14 4 627 108 687 4.78e-140 424
MsG0080048953.01.T01 AT5G58840 39.968 633 299 13 4 627 147 707 8.61e-140 424
MsG0080048953.01.T01 AT5G59130 40.981 632 313 14 4 627 143 722 1.31e-139 424
MsG0080048953.01.T01 AT5G59130 40.981 632 313 14 4 627 147 726 2.09e-139 424
MsG0080048953.01.T01 AT3G14240 39.668 663 328 17 4 626 139 769 2.56e-138 422
MsG0080048953.01.T01 AT5G59810 38.957 652 329 14 3 626 164 774 1.31e-136 418
MsG0080048953.01.T01 AT5G59130 40.506 632 306 15 4 627 147 716 6.00e-133 407
MsG0080048953.01.T01 AT5G03620 47.826 460 199 6 4 452 146 575 1.23e-132 401
MsG0080048953.01.T01 AT5G58820 39.048 630 309 15 4 627 141 701 1.63e-132 405
MsG0080048953.01.T01 AT4G34980 39.608 664 326 19 4 628 133 760 4.72e-132 405
MsG0080048953.01.T01 AT1G20160 39.728 662 319 20 1 626 105 722 1.02e-131 404
MsG0080048953.01.T01 AT1G20160 40.153 655 320 20 4 626 147 761 2.71e-131 404
MsG0080048953.01.T01 AT2G05920 37.710 655 335 17 4 626 136 749 1.77e-128 396
MsG0080048953.01.T01 AT5G67360 38.392 659 325 19 4 626 141 754 1.03e-126 392
MsG0080048953.01.T01 AT1G20150 38.543 659 332 17 4 626 149 770 3.00e-124 386
MsG0080048953.01.T01 AT4G15040 39.303 631 326 15 4 627 106 686 2.31e-123 381
MsG0080048953.01.T01 AT4G15040 39.303 631 326 15 4 627 106 686 2.31e-123 381
MsG0080048953.01.T01 AT5G51750 37.443 657 339 17 4 626 156 774 2.34e-123 384
MsG0080048953.01.T01 AT1G01900 37.634 651 345 14 4 626 154 771 9.73e-121 377
MsG0080048953.01.T01 AT4G10550 36.241 665 335 16 4 626 93 710 6.52e-118 368
MsG0080048953.01.T01 AT4G10550 36.241 665 335 16 4 626 93 710 6.52e-118 368
MsG0080048953.01.T01 AT4G10550 36.241 665 335 16 4 626 149 766 2.02e-117 368
MsG0080048953.01.T01 AT1G32960 37.054 672 321 18 4 626 147 765 4.00e-117 367
MsG0080048953.01.T01 AT4G10550 36.241 665 335 16 4 626 165 782 5.36e-117 367
MsG0080048953.01.T01 AT3G14067 37.329 659 342 20 4 626 144 767 9.77e-117 366
MsG0080048953.01.T01 AT1G04110 34.737 665 350 18 4 626 148 770 1.02e-113 358
MsG0080048953.01.T01 AT5G45650 36.960 671 331 21 4 626 162 788 3.88e-112 355
MsG0080048953.01.T01 AT5G45650 36.960 671 331 21 4 626 162 788 3.88e-112 355
MsG0080048953.01.T01 AT1G66210 36.420 648 335 18 4 626 155 750 5.27e-112 353
MsG0080048953.01.T01 AT1G32950 37.557 663 329 19 4 626 93 710 1.95e-111 351
MsG0080048953.01.T01 AT1G32950 37.557 663 329 19 4 626 144 761 4.93e-111 351
MsG0080048953.01.T01 AT4G21630 37.461 646 327 18 4 626 162 753 5.37e-111 350
MsG0080048953.01.T01 AT4G10510 35.672 670 331 19 4 626 78 694 1.60e-110 348
MsG0080048953.01.T01 AT4G10510 35.672 670 331 19 4 626 93 709 2.75e-110 348
MsG0080048953.01.T01 AT1G32940 36.637 666 332 17 4 626 93 711 3.05e-110 348
MsG0080048953.01.T01 AT1G32940 36.637 666 332 17 4 626 93 711 3.05e-110 348
MsG0080048953.01.T01 AT4G10510 35.672 670 331 19 4 626 149 765 7.73e-110 348
MsG0080048953.01.T01 AT1G32940 36.637 666 332 17 4 626 144 762 7.83e-110 348
MsG0080048953.01.T01 AT4G10510 35.672 670 331 19 4 626 137 753 9.14e-110 348
MsG0080048953.01.T01 AT1G66220 36.006 661 317 17 4 626 152 744 1.51e-109 347
MsG0080048953.01.T01 AT4G10540 35.143 663 346 16 4 626 145 763 5.32e-109 346
MsG0080048953.01.T01 AT4G21650 37.423 652 324 20 4 626 164 760 2.94e-108 343
MsG0080048953.01.T01 AT4G10520 36.128 656 331 21 4 626 144 744 1.92e-107 341
MsG0080048953.01.T01 AT4G21640 35.559 644 312 14 4 626 166 727 1.37e-106 338
MsG0080048953.01.T01 AT5G58840 41.921 458 194 9 4 457 147 536 4.84e-106 331
MsG0080048953.01.T01 AT1G32970 38.356 584 300 14 79 626 163 722 6.15e-106 337
MsG0080048953.01.T01 AT5G45640 34.873 671 338 21 4 626 132 751 2.85e-104 333
MsG0080048953.01.T01 AT4G26330 34.679 669 347 19 4 627 99 722 2.63e-101 325
MsG0080048953.01.T01 AT4G26330 34.679 669 347 19 4 627 113 736 3.68e-101 325
MsG0080048953.01.T01 AT4G10530 34.146 656 335 17 4 626 144 735 4.77e-100 322
MsG0080048953.01.T01 AT5G11940 35.866 658 330 22 4 626 152 752 5.43e-98 317
MsG0080048953.01.T01 AT5G67090 33.853 641 331 18 4 613 135 713 1.15e-92 302
MsG0080048953.01.T01 AT4G21326 34.227 634 341 17 4 613 93 674 1.29e-91 298
MsG0080048953.01.T01 AT2G39850 35.565 672 342 28 4 627 138 766 9.20e-91 298
MsG0080048953.01.T01 AT4G21323 34.540 663 324 23 4 624 197 791 5.79e-89 293
MsG0080048953.01.T01 AT1G32940 37.967 482 225 12 4 452 144 584 1.59e-78 261
MsG0080048953.01.T01 AT1G20160 41.919 396 178 11 4 381 147 508 1.94e-76 254
MsG0080048953.01.T01 AT5G58840 40.052 382 157 9 4 381 147 460 1.77e-74 246
MsG0080048953.01.T01 AT4G30020 31.726 643 354 23 26 601 162 786 3.29e-70 243
MsG0080048953.01.T01 AT4G30020 31.726 643 354 23 26 601 162 786 3.29e-70 243
MsG0080048953.01.T01 AT4G30020 31.726 643 354 23 26 601 162 786 3.29e-70 243
MsG0080048953.01.T01 AT4G30020 31.726 643 354 23 26 601 162 786 3.29e-70 243
MsG0080048953.01.T01 AT2G19170 31.696 631 335 21 68 625 202 809 1.31e-67 236
MsG0080048953.01.T01 AT2G19170 31.696 631 335 21 68 625 202 809 1.31e-67 236
MsG0080048953.01.T01 AT1G62340 29.542 633 349 26 68 626 220 829 1.79e-55 202
MsG0080048953.01.T01 AT4G20430 27.803 669 390 18 31 626 200 848 1.68e-54 200
MsG0080048953.01.T01 AT4G20430 27.803 669 390 18 31 626 200 848 1.68e-54 200
MsG0080048953.01.T01 AT4G20430 27.596 674 389 18 12 626 191 824 2.39e-52 193
MsG0080048953.01.T01 AT5G44530 28.012 664 338 26 4 582 182 790 6.79e-51 189
MsG0080048953.01.T01 AT1G30600 28.413 630 367 20 68 628 215 829 5.79e-50 186
MsG0080048953.01.T01 AT5G44530 27.286 689 336 28 4 582 182 815 6.29e-47 178
MsG0080048953.01.T01 AT1G32980 42.105 190 94 4 417 596 3 186 5.58e-36 134
MsG0080048953.01.T01 AT5G44530 25.813 461 230 17 4 396 182 598 2.53e-27 117
MsG0080048953.01.T01 AT5G59110 36.420 162 100 2 468 627 7 167 1.49e-24 101

Find 154 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTCAGGTTCACTTATA+TGG 0.191418 contig562end:-1115 MsG0080048953.01.T01:CDS
ATCCAAAGAGACTTGCATTT+TGG 0.195825 contig562end:+3924 MsG0080048953.01.T01:intergenic
GCAAGTATGGAGATTCTTTC+AGG 0.222064 contig562end:-1128 MsG0080048953.01.T01:CDS
GCATCAATCCCATTAATAAT+AGG 0.230137 contig562end:+3225 MsG0080048953.01.T01:intergenic
TCCATCAGCCTTGAAGTATT+TGG 0.242562 contig562end:+4033 MsG0080048953.01.T01:intergenic
AACCGGTACCCTATTATTAA+TGG 0.242717 contig562end:-3234 MsG0080048953.01.T01:CDS
ATTAAAGAGGAGCAATTTAT+AGG 0.252704 contig562end:+1395 MsG0080048953.01.T01:intergenic
GATAATATGTCGGCTGGGTC+AGG 0.277911 contig562end:+4007 MsG0080048953.01.T01:intergenic
TCTTGGCATCTTATACTCTT+AGG 0.278722 contig562end:-2340 MsG0080048953.01.T01:CDS
GTCCAAAATGCAAGTCTCTT+TGG 0.282984 contig562end:-3926 MsG0080048953.01.T01:CDS
ATAGTAGCATTGTAGATAAT+TGG 0.283199 contig562end:+1257 MsG0080048953.01.T01:intergenic
AGTCAAATCTATTGCAAGTA+TGG 0.288663 contig562end:-1141 MsG0080048953.01.T01:CDS
GCAGAATTTGCCTTTGGTTC+TGG 0.294430 contig562end:-1542 MsG0080048953.01.T01:CDS
GGGAAATGATGGTCCAAGTA+TGG 0.304895 contig562end:-3660 MsG0080048953.01.T01:CDS
TTGAACCTTTGTAACCTTCA+TGG 0.305651 contig562end:+1441 MsG0080048953.01.T01:intergenic
TCCATGACCATCAACGTCTA+TGG 0.307532 contig562end:+3982 MsG0080048953.01.T01:intergenic
AATTGCTCCTCTTTAATTCC+TGG 0.308806 contig562end:-1389 MsG0080048953.01.T01:CDS
ACTATACAAATGTAACCTTA+TGG 0.313399 contig562end:+1047 MsG0080048953.01.T01:intergenic
AACCTTCATGGCATAGGAAT+TGG 0.320466 contig562end:+1453 MsG0080048953.01.T01:intergenic
CTTCACCTTATTTGCTTGTA+AGG 0.324396 contig562end:+3074 MsG0080048953.01.T01:intergenic
GATGAGAATGTAGCAGTAAA+TGG 0.324925 contig562end:+2506 MsG0080048953.01.T01:intergenic
AGATGTTTGGATCCTGGATT+TGG 0.330107 contig562end:+2476 MsG0080048953.01.T01:intergenic
ACTGTGATTTCAACTCCTTT+TGG 0.338223 contig562end:+1227 MsG0080048953.01.T01:intergenic
AGCTCCAGGCATTGACATCT+TGG 0.350049 contig562end:-2357 MsG0080048953.01.T01:CDS
ACCGGTACCCTATTATTAAT+GGG 0.350311 contig562end:-3233 MsG0080048953.01.T01:CDS
TTCAAGAGCACTGTACAATT+AGG 0.351372 contig562end:-3575 MsG0080048953.01.T01:CDS
AGGTTCCTTACAAGCAAATA+AGG 0.360705 contig562end:-3079 MsG0080048953.01.T01:CDS
TCCTCTTTAATTCCTGGACT+TGG 0.370066 contig562end:-1383 MsG0080048953.01.T01:CDS
TGAAGTCATTTCACCCCAAT+TGG 0.376952 contig562end:-2214 MsG0080048953.01.T01:CDS
TATGGTTTGTAAATAACTAT+AGG 0.378473 contig562end:+1065 MsG0080048953.01.T01:intergenic
TAGTACCTTGAGAAGATGTT+TGG 0.380157 contig562end:+2463 MsG0080048953.01.T01:intergenic
CATCAATCCCATTAATAATA+GGG 0.382180 contig562end:+3226 MsG0080048953.01.T01:intergenic
GCCATACATTTGGAATTGTA+TGG 0.385508 contig562end:+4112 MsG0080048953.01.T01:intergenic
ATGGCATGTCCTCATGTTGC+TGG 0.395091 contig562end:-2251 MsG0080048953.01.T01:CDS
TTTGTTACAGTTCCCATACT+TGG 0.398488 contig562end:+3647 MsG0080048953.01.T01:intergenic
TAGGAAATCACTCACTGGTT+TGG 0.404169 contig562end:-2321 MsG0080048953.01.T01:CDS
GTTCATGACTCTATATCAAT+TGG 0.404557 contig562end:-3728 MsG0080048953.01.T01:CDS
TAGAGCTAAAGCCATACATT+TGG 0.405832 contig562end:+4102 MsG0080048953.01.T01:intergenic
ATAGAGTCATGAACATAATC+AGG 0.407916 contig562end:+3737 MsG0080048953.01.T01:intergenic
CCAGGACTCACAGCTCTTGT+TGG 0.408181 contig562end:+1509 MsG0080048953.01.T01:intergenic
TTGTTTACTGCATAGGATCA+TGG 0.412549 contig562end:-3044 MsG0080048953.01.T01:CDS
AGGACATGCCATGGAAGTTC+CGG 0.415103 contig562end:+2262 MsG0080048953.01.T01:intergenic
TTCGCGTGGCGCCGTGCCAT+CGG 0.418255 contig562end:-3888 MsG0080048953.01.T01:CDS
ATTGCAGCAGGAGTCCAATT+GGG 0.419066 contig562end:+2200 MsG0080048953.01.T01:intergenic
ACTTCCTCCACCTATGGAAA+TGG 0.419111 contig562end:+3760 MsG0080048953.01.T01:intergenic
CAGGACTCACAGCTCTTGTT+GGG 0.424003 contig562end:+1510 MsG0080048953.01.T01:intergenic
ATGGGCGATAATATGTCGGC+TGG 0.425800 contig562end:+4001 MsG0080048953.01.T01:intergenic
AATGAAGCAGAATTTGCCTT+TGG 0.426365 contig562end:-1548 MsG0080048953.01.T01:CDS
ACCATACAATTCCAAATGTA+TGG 0.426718 contig562end:-4113 MsG0080048953.01.T01:CDS
TTGAGAAGATGTTTGGATCC+TGG 0.430224 contig562end:+2470 MsG0080048953.01.T01:intergenic
GATTGCAGCAGGAGTCCAAT+TGG 0.431594 contig562end:+2199 MsG0080048953.01.T01:intergenic
TAGGTCCTCCACCAGCAAAA+TGG 0.433201 contig562end:-4300 MsG0080048953.01.T01:CDS
TCGGAATTTACTATAATATC+CGG 0.435178 contig562end:-2281 MsG0080048953.01.T01:CDS
TCCAACCATGCAACTTAGCT+TGG 0.438910 contig562end:-1342 MsG0080048953.01.T01:CDS
AAAGTCTGCTGGTCTTCAAC+TGG 0.440873 contig562end:-3848 MsG0080048953.01.T01:CDS
AAATCACTCACTGGTTTGGC+AGG 0.441603 contig562end:-2317 MsG0080048953.01.T01:CDS
GAAAATTCTAGCAAGATCAT+AGG 0.446357 contig562end:-4058 MsG0080048953.01.T01:CDS
ATAGTTATTTACAAACCATA+AGG 0.448939 contig562end:-1062 MsG0080048953.01.T01:exon
TTATCAAAACTAAGGAAACT+AGG 0.450210 contig562end:+1200 MsG0080048953.01.T01:intergenic
ATTTACAGATTCTGCAACTC+AGG 0.450544 contig562end:-3099 MsG0080048953.01.T01:intron
GCCCGAGTCGAAAAGCTTCA+AGG 0.451537 contig562end:-4332 MsG0080048953.01.T01:CDS
CGCCGTGCCATCGGCTAGGT+TGG 0.453226 contig562end:-3879 MsG0080048953.01.T01:CDS
AAACACTATGCTAATTTCTC+AGG 0.454172 contig562end:-4265 MsG0080048953.01.T01:CDS
CAGCCTGACATTGCAGCTCC+AGG 0.455615 contig562end:-2371 MsG0080048953.01.T01:CDS
ATGCCTGGAGCTGCAATGTC+AGG 0.463600 contig562end:+2368 MsG0080048953.01.T01:intergenic
ATCAGGACTTCCTCCACCTA+TGG 0.468600 contig562end:+3754 MsG0080048953.01.T01:intergenic
TTATCGCCCATAGACGTTGA+TGG 0.477905 contig562end:-3989 MsG0080048953.01.T01:CDS
CCCATAGACGTTGATGGTCA+TGG 0.481694 contig562end:-3983 MsG0080048953.01.T01:CDS
GCCAAATACTTCAAGGCTGA+TGG 0.483863 contig562end:-4034 MsG0080048953.01.T01:CDS
AAATGCAAGTCTCTTTGGAT+TGG 0.488167 contig562end:-3921 MsG0080048953.01.T01:CDS
TCCAAGCTAAGTTGCATGGT+TGG 0.489438 contig562end:+1341 MsG0080048953.01.T01:intergenic
TGTTTACTGCATAGGATCAT+GGG 0.492028 contig562end:-3043 MsG0080048953.01.T01:CDS
AGAAGAACAGTGACCAATGT+AGG 0.492666 contig562end:-1287 MsG0080048953.01.T01:CDS
AGCTTCAAGGATGATGGATT+AGG 0.493100 contig562end:-4319 MsG0080048953.01.T01:CDS
CATAGGAGCCAAATACTTCA+AGG 0.494806 contig562end:-4041 MsG0080048953.01.T01:CDS
AATTGCAAAACAATGTGTGT+AGG 0.495913 contig562end:-4361 None:intergenic
GGAAAGCTTGTTTACTGCAT+AGG 0.496821 contig562end:-3051 MsG0080048953.01.T01:CDS
TCGAAAAGCTTCAAGGATGA+TGG 0.498311 contig562end:-4325 MsG0080048953.01.T01:CDS
ATCGAAATTTGAGCAACATC+AGG 0.498442 contig562end:+2958 None:intergenic
ATTGCAAAACAATGTGTGTA+GGG 0.503601 contig562end:-4360 None:intergenic
TCCCATTAATAATAGGGTAC+CGG 0.507046 contig562end:+3232 MsG0080048953.01.T01:intergenic
GCTTTCCAAGCTAAGTTGCA+TGG 0.507458 contig562end:+1337 MsG0080048953.01.T01:intergenic
GTTGCATCAGCGGGAAATGA+TGG 0.508246 contig562end:-3671 MsG0080048953.01.T01:CDS
TCAAGTTTATCAGCACTAGT+TGG 0.511273 contig562end:-1422 MsG0080048953.01.T01:CDS
ATAATCACTGTTGCATCAGC+GGG 0.511905 contig562end:-3680 MsG0080048953.01.T01:CDS
GTGGCGCCGTGCCATCGGCT+AGG 0.513494 contig562end:-3883 MsG0080048953.01.T01:CDS
TATAATATCCGGAACTTCCA+TGG 0.513611 contig562end:-2270 MsG0080048953.01.T01:CDS
CAAAACAAGGACAATGGAAG+AGG 0.515435 contig562end:+1022 MsG0080048953.01.T01:intergenic
GCATTGTAGATAATTGGAAC+AGG 0.517141 contig562end:+1263 MsG0080048953.01.T01:intergenic
TATAATCACTGTTGCATCAG+CGG 0.525666 contig562end:-3681 MsG0080048953.01.T01:CDS
GTTTCGATCCAAAACAAAAC+CGG 0.529794 contig562end:-3251 MsG0080048953.01.T01:CDS
CTTTGTAACCTTCATGGCAT+AGG 0.531772 contig562end:+1447 MsG0080048953.01.T01:intergenic
TTCAACTGGATGTGCAGACA+TGG 0.533649 contig562end:-3834 MsG0080048953.01.T01:CDS
CCAACAAGAGCTGTGAGTCC+TGG 0.537256 contig562end:-1509 MsG0080048953.01.T01:CDS
TCATCTAGAGGACCAAATCC+AGG 0.537786 contig562end:-2488 MsG0080048953.01.T01:CDS
TGGCAATTTACAAAGTCTGC+TGG 0.540360 contig562end:-3859 MsG0080048953.01.T01:CDS
ATCCAATTCCTATGCCATGA+AGG 0.541236 contig562end:-1455 MsG0080048953.01.T01:CDS
GGCGCCACGCGAAGTTCCGT+TGG 0.543849 contig562end:+3898 MsG0080048953.01.T01:intergenic
CCATGACCATCAACGTCTAT+GGG 0.549784 contig562end:+3983 MsG0080048953.01.T01:intergenic
GATGCCAAGATGTCAATGCC+TGG 0.550406 contig562end:+2353 MsG0080048953.01.T01:intergenic
GGAAATGATGGTCCAAGTAT+GGG 0.551057 contig562end:-3659 MsG0080048953.01.T01:CDS
ATCACTCACTGGTTTGGCAG+GGG 0.552601 contig562end:-2315 MsG0080048953.01.T01:CDS
ATTGCAGATCTGATTGCAGC+AGG 0.553339 contig562end:+2188 MsG0080048953.01.T01:intergenic
TGCCAACCTAGCCGATGGCA+CGG 0.554582 contig562end:+3877 MsG0080048953.01.T01:intergenic
ATAATATGTCGGCTGGGTCA+GGG 0.559678 contig562end:+4008 MsG0080048953.01.T01:intergenic
AGATCTGCAATTATCACCAC+TGG 0.561956 contig562end:-2176 MsG0080048953.01.T01:intron
GCTACTATTAGATCACCAAA+AGG 0.563906 contig562end:-1242 MsG0080048953.01.T01:CDS
CTTACAAGCAAATAAGGTGA+AGG 0.564183 contig562end:-3073 MsG0080048953.01.T01:CDS
CTATGATTGACAATAGCAGC+AGG 0.565207 contig562end:+2931 MsG0080048953.01.T01:intergenic
AGCAAGAAAGACACACAAGT+TGG 0.566207 contig562end:-1317 MsG0080048953.01.T01:CDS
AGTGATTATACCTTTCCTCA+TGG 0.567975 contig562end:+3694 MsG0080048953.01.T01:intergenic
ATCTACGACATGGATGACCT+TGG 0.568346 contig562end:-1482 MsG0080048953.01.T01:CDS
TATGTTGATATGAAGGGTGT+AGG 0.570152 contig562end:-3282 MsG0080048953.01.T01:intron
GCTATTGTCAATCATAGCAT+AGG 0.570260 contig562end:-2925 MsG0080048953.01.T01:CDS
ACTCTTAGGAAATCACTCAC+TGG 0.570883 contig562end:-2326 MsG0080048953.01.T01:CDS
AGCACTGTACAATTAGGAAG+TGG 0.571283 contig562end:-3569 MsG0080048953.01.T01:CDS
GCATTTCATGCCATGAGGAA+AGG 0.577796 contig562end:-3704 MsG0080048953.01.T01:CDS
GTCATATCCATTTCCATAGG+TGG 0.578711 contig562end:-3767 MsG0080048953.01.T01:CDS
CATACCGCATCGACAGCTGC+AGG 0.582457 contig562end:-3956 MsG0080048953.01.T01:CDS
TCAATTATATTAAATCTACA+AGG 0.584223 contig562end:-2891 MsG0080048953.01.T01:intron
TTGGCCAACGGAACTTCGCG+TGG 0.587016 contig562end:-3902 MsG0080048953.01.T01:CDS
AGTCTCTTTGGATTGGCCAA+CGG 0.587891 contig562end:-3914 MsG0080048953.01.T01:CDS
ACTGCTACATTCTCATCTAG+AGG 0.588871 contig562end:-2500 MsG0080048953.01.T01:CDS
ATATCCATTTCCATAGGTGG+AGG 0.592460 contig562end:-3764 MsG0080048953.01.T01:CDS
TAAATTGCCAACCTAGCCGA+TGG 0.594663 contig562end:+3872 MsG0080048953.01.T01:intergenic
AGCAACATGAGGACATGCCA+TGG 0.595111 contig562end:+2253 MsG0080048953.01.T01:intergenic
ACCAAGTCCAGGAATTAAAG+AGG 0.595401 contig562end:+1382 MsG0080048953.01.T01:intergenic
TTACAAGCAAATAAGGTGAA+GGG 0.597650 contig562end:-3072 MsG0080048953.01.T01:CDS
ATAGCATCATGACCAAGTCC+AGG 0.598131 contig562end:+1371 MsG0080048953.01.T01:intergenic
GCTGCTGCAGTCACAATCCA+TGG 0.601067 contig562end:+3617 MsG0080048953.01.T01:intergenic
AATCACTCACTGGTTTGGCA+GGG 0.603337 contig562end:-2316 MsG0080048953.01.T01:CDS
AATTGGAACAGGACCTACAT+TGG 0.603598 contig562end:+1274 MsG0080048953.01.T01:intergenic
CTCTTGTATATCACTGCTGA+TGG 0.604604 contig562end:+2551 MsG0080048953.01.T01:intergenic
GTCTATGGGCGATAATATGT+CGG 0.608207 contig562end:+3997 MsG0080048953.01.T01:intergenic
CTATGCCATGAAGGTTACAA+AGG 0.609884 contig562end:-1446 MsG0080048953.01.T01:CDS
TCCTGGTTTAATCTACGACA+TGG 0.619613 contig562end:-1492 MsG0080048953.01.T01:CDS
GTTTAGTTGACCAGAACCAA+AGG 0.624890 contig562end:+1532 MsG0080048953.01.T01:intergenic
TTGCAGCAGGAGTCCAATTG+GGG 0.625306 contig562end:+2201 MsG0080048953.01.T01:intergenic
CCTCCACCAGCAAAATGGAA+AGG 0.627424 contig562end:-4295 MsG0080048953.01.T01:CDS
AGGATCCAAACATCTTCTCA+AGG 0.628811 contig562end:-2468 MsG0080048953.01.T01:intron
CGCGAAAGACTCGAAAAGCA+AGG 0.632366 contig562end:-3202 MsG0080048953.01.T01:CDS
TGGGCGATAATATGTCGGCT+GGG 0.633050 contig562end:+4002 MsG0080048953.01.T01:intergenic
TCCATGTCGTAGATTAAACC+AGG 0.635425 contig562end:+1491 MsG0080048953.01.T01:intergenic
GACGTCATATCCATTTCCAT+AGG 0.636835 contig562end:-3770 MsG0080048953.01.T01:CDS
ATAGGAATTGGATATAGCCA+AGG 0.639990 contig562end:+1465 MsG0080048953.01.T01:intergenic
GTTTACTGCATAGGATCATG+GGG 0.644029 contig562end:-3042 MsG0080048953.01.T01:CDS
ATCACCTGCAGCTGTCGATG+CGG 0.655807 contig562end:+3952 MsG0080048953.01.T01:intergenic
AGCTGCTATACATGATGGTG+TGG 0.663039 contig562end:-3792 MsG0080048953.01.T01:CDS
TTTGAAGCTGCTATACATGA+TGG 0.668274 contig562end:-3797 MsG0080048953.01.T01:CDS
CTGTAACAAATACTGCACCA+TGG 0.674321 contig562end:-3634 MsG0080048953.01.T01:CDS
GCTGCTACACCAGCAACATG+AGG 0.675686 contig562end:+2242 MsG0080048953.01.T01:intergenic
ATTGTGACTGCAGCAGCTAG+TGG 0.676595 contig562end:-3611 MsG0080048953.01.T01:CDS
TTGGTGCATTTCATGCCATG+AGG 0.696431 contig562end:-3709 MsG0080048953.01.T01:CDS
GGACTTCTAACAATGTAACG+TGG 0.723857 contig562end:+1086 MsG0080048952.01.T01:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAAAGTCTTTTTATA+AGG - contig562end:4333-4352 MsG0080048953.01.T01:CDS 10.0%
!! AATCTTAATATGTTTACAAA+AGG - contig562end:1085-1104 MsG0080048953.01.T01:CDS 15.0%
!! TCAATTATATTAAATCTACA+AGG - contig562end:2361-2380 MsG0080048953.01.T01:CDS 15.0%
!!! ACAAAAAACATAAATTTTAC+AGG + contig562end:1758-1777 MsG0080048953.01.T01:intergenic 15.0%
!!! ATTTTGTTTATAGAATGATT+AGG - contig562end:4265-4284 MsG0080048953.01.T01:CDS 15.0%
!!! TGTTTAAAACAATCATAAAA+CGG + contig562end:1925-1944 MsG0080048953.01.T01:intergenic 15.0%
!! AGATTAATAATAGTTACCTA+GGG - contig562end:2424-2443 MsG0080048953.01.T01:intron 20.0%
!! AGCTAATTTATGTTTGTTTA+CGG + contig562end:3305-3324 MsG0080048953.01.T01:intergenic 20.0%
!! AGTTCGTACAAATTATAAAA+CGG + contig562end:1863-1882 MsG0080048953.01.T01:intergenic 20.0%
!! AGTTCTTATTGAAAAACAAA+TGG + contig562end:2094-2113 MsG0080048953.01.T01:intergenic 20.0%
!! ATAGTTATTTACAAACCATA+AGG - contig562end:4190-4209 MsG0080048953.01.T01:intron 20.0%
!! TTTCAATAAGAACTAGTAAA+TGG - contig562end:2100-2119 MsG0080048953.01.T01:intron 20.0%
!!! CAATTGTTTTTAAACCATAT+TGG - contig562end:3347-3366 MsG0080048953.01.T01:intron 20.0%
!!! GCATTTTTTTATCAAAACTA+AGG + contig562end:4063-4082 MsG0080048953.01.T01:intergenic 20.0%
!!! TATGGTTTGTAAATAACTAT+AGG + contig562end:4190-4209 MsG0080048953.01.T01:intergenic 20.0%
! ACTATACAAATGTAACCTTA+TGG + contig562end:4208-4227 MsG0080048953.01.T01:intergenic 25.0%
! ATAGTAGCATTGTAGATAAT+TGG + contig562end:3998-4017 MsG0080048953.01.T01:intergenic 25.0%
! ATTAAAGAGGAGCAATTTAT+AGG + contig562end:3860-3879 MsG0080048953.01.T01:intergenic 25.0%
! ATTCAACTATGTTGATATGA+AGG - contig562end:1963-1982 MsG0080048953.01.T01:intron 25.0%
! CATCAATCCCATTAATAATA+GGG + contig562end:2029-2048 MsG0080048953.01.T01:intergenic 25.0%
! GAAGCTACTGTAAAAAAAAT+TGG - contig562end:2237-2256 MsG0080048953.01.T01:CDS 25.0%
! GAGATTAATAATAGTTACCT+AGG - contig562end:2423-2442 MsG0080048953.01.T01:intron 25.0%
! GTAAAAAAAATTGGAGGAAT+TGG - contig562end:2246-2265 MsG0080048953.01.T01:CDS 25.0%
! GTATATACTTCATACCAATA+TGG + contig562end:3364-3383 MsG0080048953.01.T01:intergenic 25.0%
! TCGGAATTTACTATAATATC+CGG - contig562end:2971-2990 MsG0080048953.01.T01:CDS 25.0%
! TTATCAAAACTAAGGAAACT+AGG + contig562end:4055-4074 MsG0080048953.01.T01:intergenic 25.0%
! TTCAACTATGTTGATATGAA+GGG - contig562end:1964-1983 MsG0080048953.01.T01:intron 25.0%
!! ATTTGAGCGAATTATGTTTT+TGG - contig562end:1730-1749 MsG0080048953.01.T01:intron 25.0%
!! TTGTTAATTCTTTTGCTCAT+AGG + contig562end:3686-3705 MsG0080048953.01.T01:intergenic 25.0%
!!! ATGCTTTGAGTATCTTTTTA+GGG - contig562end:1825-1844 MsG0080048953.01.T01:intron 25.0%
AAACACTATGCTAATTTCTC+AGG - contig562end:987-1006 MsG0080048953.01.T01:three_prime_UTR 30.0%
AAGTTATTCTGACAAGCTTA+TGG + contig562end:2567-2586 MsG0080048953.01.T01:intergenic 30.0%
ACACAAGTGTAAATAAGCTT+TGG + contig562end:3583-3602 MsG0080048953.01.T01:intergenic 30.0%
ACATTGTATCACTACATTCT+TGG - contig562end:1040-1059 MsG0080048953.01.T01:three_prime_UTR 30.0%
ACCATACAATTCCAAATGTA+TGG - contig562end:1139-1158 MsG0080048953.01.T01:CDS 30.0%
AGTCAAATCTATTGCAAGTA+TGG - contig562end:4111-4130 MsG0080048953.01.T01:CDS 30.0%
ATAGAGTCATGAACATAATC+AGG + contig562end:1518-1537 MsG0080048953.01.T01:intergenic 30.0%
CAGAATAACTTTACGAAAAC+AGG - contig562end:2576-2595 MsG0080048953.01.T01:intron 30.0%
CGAACTGAAAACTAAGTATA+TGG - contig562end:1877-1896 MsG0080048953.01.T01:intron 30.0%
GAAAATTCTAGCAAGATCAT+AGG - contig562end:1194-1213 MsG0080048953.01.T01:CDS 30.0%
GCATCAATCCCATTAATAAT+AGG + contig562end:2030-2049 MsG0080048953.01.T01:intergenic 30.0%
GCTACTGTAAAAAAAATTGG+AGG - contig562end:2240-2259 MsG0080048953.01.T01:CDS 30.0%
GTCTTATCAATGAAAAAACG+TGG + contig562end:3456-3475 MsG0080048953.01.T01:intergenic 30.0%
GTTCATGACTCTATATCAAT+TGG - contig562end:1524-1543 MsG0080048953.01.T01:CDS 30.0%
TATAATGAGTGTGAATGTGA+TGG - contig562end:3246-3265 MsG0080048953.01.T01:CDS 30.0%
TTACAAGCAAATAAGGTGAA+GGG - contig562end:2180-2199 MsG0080048953.01.T01:CDS 30.0%
! AATTCTTTTGCTCATAGGTT+TGG + contig562end:3681-3700 MsG0080048953.01.T01:intergenic 30.0%
! ATTTTGCAAAACAAGGACAA+TGG + contig562end:4239-4258 MsG0080048953.01.T01:intergenic 30.0%
! TCAAACTTTTAGTGAACTGA+AGG - contig562end:2837-2856 MsG0080048953.01.T01:intron 30.0%
! TGTCAACATTTTGCAAAACA+AGG + contig562end:4246-4265 MsG0080048953.01.T01:intergenic 30.0%
!! CATGCTTTGAGTATCTTTTT+AGG - contig562end:1824-1843 MsG0080048953.01.T01:intron 30.0%
!! TTCTTTCAGGTTCACTTATA+TGG - contig562end:4137-4156 MsG0080048953.01.T01:intron 30.0%
AAACATGTTAATCTCACCAG+TGG + contig562end:3095-3114 MsG0080048953.01.T01:intergenic 35.0%
AAATGCAAGTCTCTTTGGAT+TGG - contig562end:1331-1350 MsG0080048953.01.T01:CDS 35.0%
AACCGGTACCCTATTATTAA+TGG - contig562end:2018-2037 MsG0080048953.01.T01:intron 35.0%
AATGAAGCAGAATTTGCCTT+TGG - contig562end:3704-3723 MsG0080048953.01.T01:CDS 35.0%
AATTGCTCCTCTTTAATTCC+TGG - contig562end:3863-3882 MsG0080048953.01.T01:CDS 35.0%
ACCGGTACCCTATTATTAAT+GGG - contig562end:2019-2038 MsG0080048953.01.T01:intron 35.0%
AGGTTCCTTACAAGCAAATA+AGG - contig562end:2173-2192 MsG0080048953.01.T01:intron 35.0%
AGTGATTATACCTTTCCTCA+TGG + contig562end:1561-1580 MsG0080048953.01.T01:intergenic 35.0%
ATAGGAATTGGATATAGCCA+AGG + contig562end:3790-3809 MsG0080048953.01.T01:intergenic 35.0%
ATATTAGCCATTGGCAAAGT+CGG + contig562end:3386-3405 MsG0080048953.01.T01:intergenic 35.0%
ATCGAAATTTGAGCAACATC+AGG + contig562end:2297-2316 MsG0080048953.01.T01:intergenic 35.0%
ATGAAAAAACGTGGTTGAGA+AGG + contig562end:3447-3466 MsG0080048953.01.T01:intergenic 35.0%
ATTTACAGATTCTGCAACTC+AGG - contig562end:2153-2172 MsG0080048953.01.T01:intron 35.0%
CTGAATTTCTTGTTCAACCA+AGG - contig562end:2675-2694 MsG0080048953.01.T01:intron 35.0%
CTTACAAGCAAATAAGGTGA+AGG - contig562end:2179-2198 MsG0080048953.01.T01:CDS 35.0%
GAACTCATATCTCTTAAGCA+AGG + contig562end:3488-3507 MsG0080048953.01.T01:intergenic 35.0%
GATGAGAATGTAGCAGTAAA+TGG + contig562end:2749-2768 MsG0080048953.01.T01:intergenic 35.0%
GCATTGTAGATAATTGGAAC+AGG + contig562end:3992-4011 MsG0080048953.01.T01:intergenic 35.0%
GCTACTATTAGATCACCAAA+AGG - contig562end:4010-4029 MsG0080048953.01.T01:CDS 35.0%
GCTATTGTCAATCATAGCAT+AGG - contig562end:2327-2346 MsG0080048953.01.T01:CDS 35.0%
GTTTCGATCCAAAACAAAAC+CGG - contig562end:2001-2020 MsG0080048953.01.T01:intron 35.0%
TAGAGCTAAAGCCATACATT+TGG + contig562end:1153-1172 MsG0080048953.01.T01:intergenic 35.0%
TAGTACCTTGAGAAGATGTT+TGG + contig562end:2792-2811 MsG0080048953.01.T01:intergenic 35.0%
TATAATATCCGGAACTTCCA+TGG - contig562end:2982-3001 MsG0080048953.01.T01:CDS 35.0%
TATAATCACTGTTGCATCAG+CGG - contig562end:1571-1590 MsG0080048953.01.T01:CDS 35.0%
TCAAGTTTATCAGCACTAGT+TGG - contig562end:3830-3849 MsG0080048953.01.T01:CDS 35.0%
TCCCATTAATAATAGGGTAC+CGG + contig562end:2023-2042 MsG0080048953.01.T01:intergenic 35.0%
TCTTGGCATCTTATACTCTT+AGG - contig562end:2912-2931 MsG0080048953.01.T01:CDS 35.0%
TGAAAAAACGTGGTTGAGAA+GGG + contig562end:3446-3465 MsG0080048953.01.T01:intergenic 35.0%
TGTTTACTGCATAGGATCAT+GGG - contig562end:2209-2228 MsG0080048953.01.T01:CDS 35.0%
TTGAACCTTTGTAACCTTCA+TGG + contig562end:3814-3833 MsG0080048953.01.T01:intergenic 35.0%
TTGTTTACTGCATAGGATCA+TGG - contig562end:2208-2227 MsG0080048953.01.T01:CDS 35.0%
TTTGTTACAGTTCCCATACT+TGG + contig562end:1608-1627 MsG0080048953.01.T01:intergenic 35.0%
! ACTGTGATTTCAACTCCTTT+TGG + contig562end:4028-4047 MsG0080048953.01.T01:intergenic 35.0%
! ATCCAAAGAGACTTGCATTT+TGG + contig562end:1331-1350 MsG0080048953.01.T01:intergenic 35.0%
! CTTCACCTTATTTGCTTGTA+AGG + contig562end:2181-2200 MsG0080048953.01.T01:intergenic 35.0%
! GCCATACATTTGGAATTGTA+TGG + contig562end:1143-1162 MsG0080048953.01.T01:intergenic 35.0%
! TATGTTGATATGAAGGGTGT+AGG - contig562end:1970-1989 MsG0080048953.01.T01:intron 35.0%
! TGCTAGAATTTTCATGCAAG+AGG + contig562end:1187-1206 MsG0080048953.01.T01:intergenic 35.0%
! TTTGAAGCTGCTATACATGA+TGG - contig562end:1455-1474 MsG0080048953.01.T01:CDS 35.0%
!! CATGCTGCTTTGTAATTTGT+AGG + contig562end:1808-1827 MsG0080048953.01.T01:intergenic 35.0%
!! TTCAAGAGCACTGTACAATT+AGG - contig562end:1677-1696 MsG0080048953.01.T01:intron 35.0%
AACCTTCATGGCATAGGAAT+TGG + contig562end:3802-3821 MsG0080048953.01.T01:intergenic 40.0%
AATTGGAACAGGACCTACAT+TGG + contig562end:3981-4000 MsG0080048953.01.T01:intergenic 40.0%
ACCAAGTCCAGGAATTAAAG+AGG + contig562end:3873-3892 MsG0080048953.01.T01:intergenic 40.0%
ACTCTTAGGAAATCACTCAC+TGG - contig562end:2926-2945 MsG0080048953.01.T01:CDS 40.0%
ACTGCTACATTCTCATCTAG+AGG - contig562end:2752-2771 MsG0080048953.01.T01:intron 40.0%
AGAAGAACAGTGACCAATGT+AGG - contig562end:3965-3984 MsG0080048953.01.T01:CDS 40.0%
AGACTGCTTAGGAGAACTTA+TGG - contig562end:2499-2518 MsG0080048953.01.T01:CDS 40.0%
AGATCTGCAATTATCACCAC+TGG - contig562end:3076-3095 MsG0080048953.01.T01:CDS 40.0%
AGATGTTTGGATCCTGGATT+TGG + contig562end:2779-2798 MsG0080048953.01.T01:intergenic 40.0%
AGCAAGAAAGACACACAAGT+TGG - contig562end:3935-3954 MsG0080048953.01.T01:CDS 40.0%
AGCACTGTACAATTAGGAAG+TGG - contig562end:1683-1702 MsG0080048953.01.T01:intron 40.0%
AGGATCCAAACATCTTCTCA+AGG - contig562end:2784-2803 MsG0080048953.01.T01:intron 40.0%
ATAATCACTGTTGCATCAGC+GGG - contig562end:1572-1591 MsG0080048953.01.T01:CDS 40.0%
ATATCCATTTCCATAGGTGG+AGG - contig562end:1488-1507 MsG0080048953.01.T01:CDS 40.0%
ATCCAATTCCTATGCCATGA+AGG - contig562end:3797-3816 MsG0080048953.01.T01:CDS 40.0%
CAAAACAAGGACAATGGAAG+AGG + contig562end:4233-4252 MsG0080048953.01.T01:intergenic 40.0%
CAACATAACGTTTGTCTGAG+TGG + contig562end:3515-3534 MsG0080048953.01.T01:intergenic 40.0%
CATAGGAGCCAAATACTTCA+AGG - contig562end:1211-1230 MsG0080048953.01.T01:CDS 40.0%
CTATGATTGACAATAGCAGC+AGG + contig562end:2324-2343 MsG0080048953.01.T01:intergenic 40.0%
CTATGCCATGAAGGTTACAA+AGG - contig562end:3806-3825 MsG0080048953.01.T01:CDS 40.0%
CTCTTGTATATCACTGCTGA+TGG + contig562end:2704-2723 MsG0080048953.01.T01:intergenic 40.0%
CTGTAACAAATACTGCACCA+TGG - contig562end:1618-1637 MsG0080048953.01.T01:intron 40.0%
CTTTGTAACCTTCATGGCAT+AGG + contig562end:3808-3827 MsG0080048953.01.T01:intergenic 40.0%
GACGTCATATCCATTTCCAT+AGG - contig562end:1482-1501 MsG0080048953.01.T01:CDS 40.0%
GCAAGTATGGAGATTCTTTC+AGG - contig562end:4124-4143 MsG0080048953.01.T01:CDS 40.0%
GGAAATGATGGTCCAAGTAT+GGG - contig562end:1593-1612 MsG0080048953.01.T01:intron 40.0%
GGACTTCTAACAATGTAACG+TGG + contig562end:4169-4188 MsG0080048953.01.T01:intergenic 40.0%
GTCATATCCATTTCCATAGG+TGG - contig562end:1485-1504 MsG0080048953.01.T01:CDS 40.0%
GTCCAAAATGCAAGTCTCTT+TGG - contig562end:1326-1345 MsG0080048953.01.T01:CDS 40.0%
GTCTATGGGCGATAATATGT+CGG + contig562end:1258-1277 MsG0080048953.01.T01:intergenic 40.0%
GTTTACTGCATAGGATCATG+GGG - contig562end:2210-2229 MsG0080048953.01.T01:CDS 40.0%
GTTTAGTTGACCAGAACCAA+AGG + contig562end:3723-3742 MsG0080048953.01.T01:intergenic 40.0%
TCCATGTCGTAGATTAAACC+AGG + contig562end:3764-3783 MsG0080048953.01.T01:intergenic 40.0%
TCCTCTTTAATTCCTGGACT+TGG - contig562end:3869-3888 MsG0080048953.01.T01:CDS 40.0%
TCCTGGTTTAATCTACGACA+TGG - contig562end:3760-3779 MsG0080048953.01.T01:CDS 40.0%
TCGAAAAGCTTCAAGGATGA+TGG - contig562end:927-946 MsG0080048953.01.T01:three_prime_UTR 40.0%
TGAAGTCATTTCACCCCAAT+TGG - contig562end:3038-3057 MsG0080048953.01.T01:CDS 40.0%
TGGCAATTTACAAAGTCTGC+TGG - contig562end:1393-1412 MsG0080048953.01.T01:CDS 40.0%
TTCTCCTAAGCAGTCTTAGA+CGG + contig562end:2495-2514 MsG0080048953.01.T01:intergenic 40.0%
TTGAGAAGATGTTTGGATCC+TGG + contig562end:2785-2804 MsG0080048953.01.T01:intergenic 40.0%
! ATCCTTGAAGCTTTTCGACT+CGG + contig562end:925-944 MsG0080048953.01.T01:intergenic 40.0%
! CAAGTTCCTTTCCATTTTGC+TGG + contig562end:966-985 MsG0080048953.01.T01:intergenic 40.0%
! GGAAAGCTTGTTTACTGCAT+AGG - contig562end:2201-2220 MsG0080048953.01.T01:CDS 40.0%
! TAGGAAATCACTCACTGGTT+TGG - contig562end:2931-2950 MsG0080048953.01.T01:CDS 40.0%
! TCCATCAGCCTTGAAGTATT+TGG + contig562end:1222-1241 MsG0080048953.01.T01:intergenic 40.0%
!! AGCTTCAAGGATGATGGATT+AGG - contig562end:933-952 MsG0080048953.01.T01:three_prime_UTR 40.0%
!! GTATATACCGACTTTGCCAA+TGG - contig562end:3376-3395 MsG0080048953.01.T01:intron 40.0%
!!! ATAGGGTACCGGTTTTGTTT+TGG + contig562end:2012-2031 MsG0080048953.01.T01:intergenic 40.0%
!!! GAGCTAGCACTTTTTCTTCA+TGG + contig562end:2727-2746 MsG0080048953.01.T01:intergenic 40.0%
ACTTCCTCCACCTATGGAAA+TGG + contig562end:1495-1514 MsG0080048953.01.T01:intergenic 45.0%
AGTTACCTAGGGTCTGTCTT+TGG - contig562end:2435-2454 MsG0080048953.01.T01:intron 45.0%
ATAGCATCATGACCAAGTCC+AGG + contig562end:3884-3903 MsG0080048953.01.T01:intergenic 45.0%
ATCTACGACATGGATGACCT+TGG - contig562end:3770-3789 MsG0080048953.01.T01:CDS 45.0%
ATTGCAGATCTGATTGCAGC+AGG + contig562end:3067-3086 MsG0080048953.01.T01:intergenic 45.0%
ATTGCAGCAGGAGTCCAATT+GGG + contig562end:3055-3074 MsG0080048953.01.T01:intergenic 45.0%
CCATGACCATCAACGTCTAT+GGG + contig562end:1272-1291 MsG0080048953.01.T01:intergenic 45.0%
CTAATATCCGCTGCGGAATT+TGG - contig562end:3399-3418 MsG0080048953.01.T01:intron 45.0%
GCATTTCATGCCATGAGGAA+AGG - contig562end:1548-1567 MsG0080048953.01.T01:CDS 45.0%
GCCAAATACTTCAAGGCTGA+TGG - contig562end:1218-1237 MsG0080048953.01.T01:CDS 45.0%
GCTTTCCAAGCTAAGTTGCA+TGG + contig562end:3918-3937 MsG0080048953.01.T01:intergenic 45.0%
GGGAAATGATGGTCCAAGTA+TGG - contig562end:1592-1611 MsG0080048953.01.T01:intron 45.0%
TAAATTGCCAACCTAGCCGA+TGG + contig562end:1383-1402 MsG0080048953.01.T01:intergenic 45.0%
TCAATCCAAAGACAGACCCT+AGG + contig562end:2443-2462 MsG0080048953.01.T01:intergenic 45.0%
TCATCTAGAGGACCAAATCC+AGG - contig562end:2764-2783 MsG0080048953.01.T01:intron 45.0%
TCCAACCATGCAACTTAGCT+TGG - contig562end:3910-3929 MsG0080048953.01.T01:CDS 45.0%
TCCAAGCTAAGTTGCATGGT+TGG + contig562end:3914-3933 MsG0080048953.01.T01:intergenic 45.0%
TCCATGACCATCAACGTCTA+TGG + contig562end:1273-1292 MsG0080048953.01.T01:intergenic 45.0%
TCTCCTAAGCAGTCTTAGAC+GGG + contig562end:2494-2513 MsG0080048953.01.T01:intergenic 45.0%
TTATCGCCCATAGACGTTGA+TGG - contig562end:1263-1282 MsG0080048953.01.T01:CDS 45.0%
TTCAACTGGATGTGCAGACA+TGG - contig562end:1418-1437 MsG0080048953.01.T01:CDS 45.0%
TTGGTGCATTTCATGCCATG+AGG - contig562end:1543-1562 MsG0080048953.01.T01:CDS 45.0%
! AGCTGCTATACATGATGGTG+TGG - contig562end:1460-1479 MsG0080048953.01.T01:CDS 45.0%
! ATAATATGTCGGCTGGGTCA+GGG + contig562end:1247-1266 MsG0080048953.01.T01:intergenic 45.0%
! GCAGAATTTGCCTTTGGTTC+TGG - contig562end:3710-3729 MsG0080048953.01.T01:CDS 45.0%
! GGCAGGGGATACACAATTTT+CGG - contig562end:2952-2971 MsG0080048953.01.T01:CDS 45.0%
! GTTCCTTTCCATTTTGCTGG+TGG + contig562end:963-982 MsG0080048953.01.T01:intergenic 45.0%
! TCCTTGAAGCTTTTCGACTC+GGG + contig562end:924-943 MsG0080048953.01.T01:intergenic 45.0%
! TTTGGCTAGCCACATTAGTG+AGG - contig562end:3417-3436 MsG0080048953.01.T01:intron 45.0%
!! AAAGTCTGCTGGTCTTCAAC+TGG - contig562end:1404-1423 MsG0080048953.01.T01:CDS 45.0%
!! AAATCACTCACTGGTTTGGC+AGG - contig562end:2935-2954 MsG0080048953.01.T01:CDS 45.0%
!! AATCACTCACTGGTTTGGCA+GGG - contig562end:2936-2955 MsG0080048953.01.T01:CDS 45.0%
!! AGTCTCTTTGGATTGGCCAA+CGG - contig562end:1338-1357 MsG0080048953.01.T01:CDS 45.0%
!!! CTTGCTTTTCGAGTCTTTCG+CGG + contig562end:2052-2071 MsG0080048953.01.T01:intergenic 45.0%
!!! ATTATTTTTAAAATTGAAAA+TGG + contig562end:3155-3174 MsG0080048953.01.T01:intergenic 5.0%
AGCAACATGAGGACATGCCA+TGG + contig562end:3002-3021 MsG0080048953.01.T01:intergenic 50.0%
AGGACATGCCATGGAAGTTC+CGG + contig562end:2993-3012 MsG0080048953.01.T01:intergenic 50.0%
ATCAGGACTTCCTCCACCTA+TGG + contig562end:1501-1520 MsG0080048953.01.T01:intergenic 50.0%
ATGGCATGTCCTCATGTTGC+TGG - contig562end:3001-3020 MsG0080048953.01.T01:CDS 50.0%
ATGGGCGATAATATGTCGGC+TGG + contig562end:1254-1273 MsG0080048953.01.T01:intergenic 50.0%
ATTGTGACTGCAGCAGCTAG+TGG - contig562end:1641-1660 MsG0080048953.01.T01:intron 50.0%
CAGGACTCACAGCTCTTGTT+GGG + contig562end:3745-3764 MsG0080048953.01.T01:intergenic 50.0%
CCAATGGCTAATATCCGCTG+CGG - contig562end:3392-3411 MsG0080048953.01.T01:intron 50.0%
CCTCCACCAGCAAAATGGAA+AGG - contig562end:957-976 MsG0080048953.01.T01:three_prime_UTR 50.0%
CGCGAAAGACTCGAAAAGCA+AGG - contig562end:2050-2069 MsG0080048953.01.T01:intron 50.0%
GAAGGGAGACCTCACTAATG+TGG + contig562end:3429-3448 MsG0080048953.01.T01:intergenic 50.0%
GATGCCAAGATGTCAATGCC+TGG + contig562end:2902-2921 MsG0080048953.01.T01:intergenic 50.0%
GATTGCAGCAGGAGTCCAAT+TGG + contig562end:3056-3075 MsG0080048953.01.T01:intergenic 50.0%
GTTGCATCAGCGGGAAATGA+TGG - contig562end:1581-1600 MsG0080048953.01.T01:intron 50.0%
TAGGTCCTCCACCAGCAAAA+TGG - contig562end:952-971 MsG0080048953.01.T01:three_prime_UTR 50.0%
TTGCAGCAGGAGTCCAATTG+GGG + contig562end:3054-3073 MsG0080048953.01.T01:intergenic 50.0%
! AAGCCCGTCTAAGACTGCTT+AGG - contig562end:2488-2507 MsG0080048953.01.T01:CDS 50.0%
! ATCACTGCTGATGGTGACCT+TGG + contig562end:2695-2714 MsG0080048953.01.T01:intergenic 50.0%
! CCTTTCCATTTTGCTGGTGG+AGG + contig562end:960-979 MsG0080048953.01.T01:intergenic 50.0%
! GATAATATGTCGGCTGGGTC+AGG + contig562end:1248-1267 MsG0080048953.01.T01:intergenic 50.0%
! TGGGCGATAATATGTCGGCT+GGG + contig562end:1253-1272 MsG0080048953.01.T01:intergenic 50.0%
!! AGCTCCAGGCATTGACATCT+TGG - contig562end:2895-2914 MsG0080048953.01.T01:CDS 50.0%
!! ATCACTCACTGGTTTGGCAG+GGG - contig562end:2937-2956 MsG0080048953.01.T01:CDS 50.0%
!! CCCATAGACGTTGATGGTCA+TGG - contig562end:1269-1288 MsG0080048953.01.T01:CDS 50.0%
ATCACCTGCAGCTGTCGATG+CGG + contig562end:1303-1322 MsG0080048953.01.T01:intergenic 55.0%
ATGCCTGGAGCTGCAATGTC+AGG + contig562end:2887-2906 MsG0080048953.01.T01:intergenic 55.0%
CCAACAAGAGCTGTGAGTCC+TGG - contig562end:3743-3762 MsG0080048953.01.T01:CDS 55.0%
CCAGGACTCACAGCTCTTGT+TGG + contig562end:3746-3765 MsG0080048953.01.T01:intergenic 55.0%
CCGCAGCGGATATTAGCCAT+TGG + contig562end:3395-3414 MsG0080048953.01.T01:intergenic 55.0%
GCCCGAGTCGAAAAGCTTCA+AGG - contig562end:920-939 MsG0080048953.01.T01:three_prime_UTR 55.0%
GCTGCTACACCAGCAACATG+AGG + contig562end:3013-3032 MsG0080048953.01.T01:intergenic 55.0%
GCTGCTGCAGTCACAATCCA+TGG + contig562end:1638-1657 MsG0080048953.01.T01:intergenic 55.0%
! TGGCTAGCCAAATTCCGCAG+CGG + contig562end:3409-3428 MsG0080048953.01.T01:intergenic 55.0%
CAGCCTGACATTGCAGCTCC+AGG - contig562end:2881-2900 MsG0080048953.01.T01:intron 60.0%
TGCCAACCTAGCCGATGGCA+CGG + contig562end:1378-1397 MsG0080048953.01.T01:intergenic 60.0%
TTGGCCAACGGAACTTCGCG+TGG - contig562end:1350-1369 MsG0080048953.01.T01:CDS 60.0%
! CATACCGCATCGACAGCTGC+AGG - contig562end:1296-1315 MsG0080048953.01.T01:CDS 60.0%
GGCGCCACGCGAAGTTCCGT+TGG + contig562end:1357-1376 MsG0080048953.01.T01:intergenic 70.0%
TTCGCGTGGCGCCGTGCCAT+CGG - contig562end:1364-1383 MsG0080048953.01.T01:CDS 70.0%
! CGCCGTGCCATCGGCTAGGT+TGG - contig562end:1373-1392 MsG0080048953.01.T01:CDS 70.0%
! GTGGCGCCGTGCCATCGGCT+AGG - contig562end:1369-1388 MsG0080048953.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
contig562end gene 903 4371 903 ID=MsG0080048953.01;Name=MsG0080048953.01
contig562end mRNA 903 4371 903 ID=MsG0080048953.01.T01;Parent=MsG0080048953.01;Name=MsG0080048953.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0.83|0.71|1|0.83|0.71|7|161|629
contig562end exon 4256 4371 4256 ID=MsG0080048953.01.T01:exon:13477;Parent=MsG0080048953.01.T01
contig562end exon 3556 4153 3556 ID=MsG0080048953.01.T01:exon:13478;Parent=MsG0080048953.01.T01
contig562end exon 3192 3289 3192 ID=MsG0080048953.01.T01:exon:13479;Parent=MsG0080048953.01.T01
contig562end exon 2892 3113 2892 ID=MsG0080048953.01.T01:exon:13480;Parent=MsG0080048953.01.T01
contig562end exon 2469 2577 2469 ID=MsG0080048953.01.T01:exon:13481;Parent=MsG0080048953.01.T01
contig562end exon 2177 2390 2177 ID=MsG0080048953.01.T01:exon:13482;Parent=MsG0080048953.01.T01
contig562end exon 903 1596 903 ID=MsG0080048953.01.T01:exon:13483;Parent=MsG0080048953.01.T01
contig562end CDS 4256 4371 4256 ID=MsG0080048953.01.T01:cds;Parent=MsG0080048953.01.T01
contig562end CDS 3556 4153 3556 ID=MsG0080048953.01.T01:cds;Parent=MsG0080048953.01.T01
contig562end CDS 3192 3289 3192 ID=MsG0080048953.01.T01:cds;Parent=MsG0080048953.01.T01
contig562end CDS 2892 3113 2892 ID=MsG0080048953.01.T01:cds;Parent=MsG0080048953.01.T01
contig562end CDS 2469 2577 2469 ID=MsG0080048953.01.T01:cds;Parent=MsG0080048953.01.T01
contig562end CDS 2177 2390 2177 ID=MsG0080048953.01.T01:cds;Parent=MsG0080048953.01.T01
contig562end CDS 1064 1596 1064 ID=MsG0080048953.01.T01:cds;Parent=MsG0080048953.01.T01
contig562end three_prime_UTR 903 1063 903 ID=MsG0080048953.01.T01:three_prime_utr;Parent=MsG0080048953.01.T01
Gene Sequence

>MsG0080048953.01.T01

ATGTGTGTAGGGATCACGCCCGAGTCGAAAAGCTTCAAGGATGATGGATTAGGTCCTCCACCAGCAAAATGGAAAGGAACTTGTAAACACTATGCTAATTTCTCAGGCTGCAACAACTCAGAAGTAAATTACAAACCATACAATTCCAAATGTATGGCTTTAGCTCTAACTCATGTATTCCTCTTGCATGAAAATTCTAGCAAGATCATAGGAGCCAAATACTTCAAGGCTGATGGAAACCCTGACCCAGCCGACATATTATCGCCCATAGACGTTGATGGTCATGGAACTCATACCGCATCGACAGCTGCAGGTGATTTAGTCCAAAATGCAAGTCTCTTTGGATTGGCCAACGGAACTTCGCGTGGCGCCGTGCCATCGGCTAGGTTGGCAATTTACAAAGTCTGCTGGTCTTCAACTGGATGTGCAGACATGGACATACTTGCTGCATTTGAAGCTGCTATACATGATGGTGTGGACGTCATATCCATTTCCATAGGTGGAGGAAGTCCTGATTATGTTCATGACTCTATATCAATTGGTGCATTTCATGCCATGAGGAAAGGTATAATCACTGTTGCATCAGCGGGAAATGATGGTCCAAGTATGGGAACTGTAACAAATACTGCACCATGGATTGTGACTGCAGCAGCTAGTGGCATTGACAGAGCTTTCAAGAGCACTGTACAATTAGGAAGTGGAAAAAATGTTTCTGGTGTAGGAATTAGCTGTTTCGATCCAAAACAAAACCGGTACCCTATTATTAATGGGATTGATGCCGCGAAAGACTCGAAAAGCAAGGAAGATGCTAAATTCTGCAACTCAGGTTCCTTACAAGCAAATAAGGTGAAGGGAAAGCTTGTTTACTGCATAGGATCATGGGGCACTGAAGCTACTGTAAAAAAAATTGGAGGAATTGGTAGTGTAATAGAATATGACAATTATCCTGATGTTGCTCAAATTTCGATAGCTCCTGCTGCTATTGTCAATCATAGCATAGGTGAAACTATTATCAATTATATTAAATCTACAAGGTCACCATCAGCAGTGATATACAAGAGCCATGAAGAAAAAGTGCTAGCTCCATTTACTGCTACATTCTCATCTAGAGGACCAAATCCAGGATCCAAACATCTTCTCAAGCCTGACATTGCAGCTCCAGGCATTGACATCTTGGCATCTTATACTCTTAGGAAATCACTCACTGGTTTGGCAGGGGATACACAATTTTCGGAATTTACTATAATATCCGGAACTTCCATGGCATGTCCTCATGTTGCTGGTGTAGCAGCATATGTGAAGTCATTTCACCCCAATTGGACTCCTGCTGCAATCAGATCTGCAATTATCACCACTGCCAAACCTATGAGCAAAAGAATTAACAATGAAGCAGAATTTGCCTTTGGTTCTGGTCAACTAAACCCAACAAGAGCTGTGAGTCCTGGTTTAATCTACGACATGGATGACCTTGGCTATATCCAATTCCTATGCCATGAAGGTTACAAAGGTTCAAGTTTATCAGCACTAGTTGGTTCTCCTATAAATTGCTCCTCTTTAATTCCTGGACTTGGTCATGATGCTATCAACTATCCAACCATGCAACTTAGCTTGGAAAGCAAGAAAGACACACAAGTTGGAGTTTTTAGAAGAACAGTGACCAATGTAGGTCCTGTTCCAATTATCTACAATGCTACTATTAGATCACCAAAAGGAGTTGAAATCACAGTGAAGCCTAGTTTCCTTAGTTTTGATAAAAAAATGCAGAAGAGAAGCTTCAAAGTAGTTGTGAAAGTCAAATCTATTGCAAGTATGGAGATTCTTTCAGGTTCACTTATATGGAGAAGTCCACGTTACATTGTTAGAAGTCCTATAGTTATTTACAAACCATAA
Protein sequence

>MsG0080048953.01.T01

MCVGITPESKSFKDDGLGPPPAKWKGTCKHYANFSGCNNSEVNYKPYNSKCMALALTHVFLLHENSSKIIGAKYFKADGNPDPADILSPIDVDGHGTHTASTAAGDLVQNASLFGLANGTSRGAVPSARLAIYKVCWSSTGCADMDILAAFEAAIHDGVDVISISIGGGSPDYVHDSISIGAFHAMRKGIITVASAGNDGPSMGTVTNTAPWIVTAAASGIDRAFKSTVQLGSGKNVSGVGISCFDPKQNRYPIINGIDAAKDSKSKEDAKFCNSGSLQANKVKGKLVYCIGSWGTEATVKKIGGIGSVIEYDNYPDVAQISIAPAAIVNHSIGETIINYIKSTRSPSAVIYKSHEEKVLAPFTATFSSRGPNPGSKHLLKPDIAAPGIDILASYTLRKSLTGLAGDTQFSEFTIISGTSMACPHVAGVAAYVKSFHPNWTPAAIRSAIITTAKPMSKRINNEAEFAFGSGQLNPTRAVSPGLIYDMDDLGYIQFLCHEGYKGSSLSALVGSPINCSSLIPGLGHDAINYPTMQLSLESKKDTQVGVFRRTVTNVGPVPIIYNATIRSPKGVEITVKPSFLSFDKKMQKRSFKVVVKVKSIASMEILSGSLIWRSPRYIVRSPIVIYKP*