Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041912.01.T01 | XP_003626672.2 | 95.312 | 256 | 12 | 0 | 1 | 256 | 1 | 256 | 1.09E-178 | 510 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041912.01.T01 | Q9LZV3 | 67.755 | 245 | 62 | 3 | 7 | 251 | 8 | 235 | 1.27E-114 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041912.01.T01 | G7LAQ6 | 95.312 | 256 | 12 | 0 | 1 | 256 | 1 | 256 | 5.18e-179 | 510 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048953.01 | MsG0880041912.01 | 0.818451 | 1.946438e-52 | 1.457686e-49 |
| MsG0180000376.01 | MsG0880041912.01 | 0.818670 | 1.736151e-52 | 1.307929e-49 |
| MsG0180000377.01 | MsG0880041912.01 | 0.838232 | 3.249655e-57 | 4.324804e-54 |
| MsG0180004803.01 | MsG0880041912.01 | 0.816011 | 6.888976e-52 | 4.824887e-49 |
| MsG0880041912.01 | MsG0880046147.01 | 0.804986 | 1.659555e-49 | 8.678738e-47 |
| MsG0580024979.01 | MsG0880041912.01 | 0.813412 | 2.593525e-51 | 1.692552e-48 |
| MsG0580025970.01 | MsG0880041912.01 | 0.819142 | 1.356681e-52 | 1.035385e-49 |
| MsG0380017975.01 | MsG0880041912.01 | 0.876503 | 1.325923e-68 | 6.444824e-65 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041912.01.T01 | MTR_8g005670 | 95.312 | 256 | 12 | 0 | 1 | 256 | 1 | 256 | 0.0 | 510 |
| MsG0880041912.01.T01 | MTR_8g006550 | 91.561 | 237 | 20 | 0 | 20 | 256 | 23 | 259 | 7.73e-160 | 452 |
| MsG0880041912.01.T01 | MTR_8g005270 | 91.561 | 237 | 20 | 0 | 20 | 256 | 3 | 239 | 8.16e-160 | 452 |
| MsG0880041912.01.T01 | MTR_7g073550 | 78.281 | 221 | 44 | 1 | 40 | 256 | 32 | 252 | 4.21e-126 | 367 |
| MsG0880041912.01.T01 | MTR_7g073550 | 77.727 | 220 | 46 | 1 | 40 | 256 | 32 | 251 | 4.63e-125 | 364 |
| MsG0880041912.01.T01 | MTR_7g073620 | 78.218 | 202 | 44 | 0 | 55 | 256 | 3 | 204 | 1.28e-116 | 341 |
| MsG0880041912.01.T01 | MTR_4g078230 | 51.818 | 220 | 100 | 3 | 50 | 263 | 23 | 242 | 2.07e-78 | 244 |
| MsG0880041912.01.T01 | MTR_7g111740 | 54.808 | 208 | 87 | 1 | 41 | 248 | 47 | 247 | 3.46e-78 | 243 |
| MsG0880041912.01.T01 | MTR_1g085310 | 58.919 | 185 | 75 | 1 | 64 | 248 | 30 | 213 | 7.08e-77 | 239 |
| MsG0880041912.01.T01 | MTR_5g020890 | 57.360 | 197 | 83 | 1 | 56 | 251 | 24 | 220 | 1.11e-76 | 240 |
| MsG0880041912.01.T01 | MTR_4g043760 | 55.978 | 184 | 81 | 0 | 64 | 247 | 35 | 218 | 1.89e-76 | 238 |
| MsG0880041912.01.T01 | MTR_1g085430 | 57.297 | 185 | 79 | 0 | 64 | 248 | 33 | 217 | 9.11e-76 | 236 |
| MsG0880041912.01.T01 | MTR_3g112060 | 52.356 | 191 | 91 | 0 | 58 | 248 | 21 | 211 | 1.35e-74 | 234 |
| MsG0880041912.01.T01 | MTR_1g085350 | 57.297 | 185 | 78 | 1 | 64 | 248 | 90 | 273 | 1.83e-73 | 232 |
| MsG0880041912.01.T01 | MTR_1g085320 | 58.757 | 177 | 71 | 1 | 64 | 238 | 32 | 208 | 4.18e-73 | 229 |
| MsG0880041912.01.T01 | MTR_1g085420 | 56.757 | 185 | 80 | 0 | 64 | 248 | 33 | 217 | 1.64e-72 | 228 |
| MsG0880041912.01.T01 | MTR_2g090390 | 53.061 | 196 | 91 | 1 | 57 | 251 | 34 | 229 | 7.55e-71 | 224 |
| MsG0880041912.01.T01 | MTR_0005s0150 | 57.407 | 108 | 46 | 0 | 140 | 247 | 12 | 119 | 4.65e-42 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041912.01.T01 | AT5G01930 | 67.755 | 245 | 62 | 3 | 7 | 251 | 8 | 235 | 1.29e-115 | 340 |
| MsG0880041912.01.T01 | AT4G28320 | 54.688 | 192 | 86 | 1 | 58 | 248 | 36 | 227 | 6.71e-73 | 230 |
| MsG0880041912.01.T01 | AT3G10900 | 55.135 | 185 | 82 | 1 | 64 | 247 | 30 | 214 | 1.11e-72 | 229 |
| MsG0880041912.01.T01 | AT3G10890 | 51.596 | 188 | 91 | 0 | 64 | 251 | 32 | 219 | 1.85e-71 | 226 |
| MsG0880041912.01.T01 | AT5G66460 | 51.596 | 188 | 91 | 0 | 64 | 251 | 32 | 219 | 4.40e-71 | 225 |
| MsG0880041912.01.T01 | AT2G20680 | 53.333 | 195 | 90 | 1 | 58 | 251 | 37 | 231 | 2.70e-70 | 223 |
| MsG0880041912.01.T01 | AT1G02310 | 50.802 | 187 | 85 | 3 | 64 | 248 | 50 | 231 | 1.92e-61 | 200 |
| MsG0880041912.01.T01 | AT1G02310 | 50.802 | 187 | 85 | 3 | 64 | 248 | 30 | 211 | 2.03e-61 | 200 |
| MsG0880041912.01.T01 | AT3G30540 | 41.414 | 198 | 77 | 2 | 64 | 259 | 30 | 190 | 7.63e-48 | 162 |
Find 66 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCAACCTTTCTATGTAAA+TGG | 0.163607 | 8:-1077022 | MsG0880041912.01.T01:CDS |
| TTAATAAATGGGCGCTAAAA+AGG | 0.166587 | 8:+1076313 | None:intergenic |
| CCAAATTCCATCTTAACTTA+TGG | 0.180101 | 8:-1077199 | MsG0880041912.01.T01:CDS |
| CCATAAGTTAAGATGGAATT+TGG | 0.274969 | 8:+1077199 | None:intergenic |
| TAAATGGATTCAACACTTAC+TGG | 0.284522 | 8:-1077006 | MsG0880041912.01.T01:CDS |
| GAAAGGAAATAACACATAAT+TGG | 0.289737 | 8:+1077311 | None:intergenic |
| CTCCTCTGGTGATACGTTAC+AGG | 0.324607 | 8:-1076422 | MsG0880041912.01.T01:CDS |
| GTTGGTCATTCACTGCAAAT+TGG | 0.331406 | 8:+1077038 | None:intergenic |
| CAAATTCCATCTTAACTTAT+GGG | 0.334308 | 8:-1077198 | MsG0880041912.01.T01:intron |
| TATTATCATTGGTTAACAAT+TGG | 0.335350 | 8:-1076769 | MsG0880041912.01.T01:CDS |
| ACTCACAAATATCACTTATA+AGG | 0.349810 | 8:-1076500 | MsG0880041912.01.T01:CDS |
| TTGAATCCATTTACATAGAA+AGG | 0.367924 | 8:+1077016 | None:intergenic |
| ATTATCATTGGTTAACAATT+GGG | 0.370572 | 8:-1076768 | MsG0880041912.01.T01:CDS |
| GTATGACAGTTTGTAGGACT+TGG | 0.375713 | 8:-1076910 | MsG0880041912.01.T01:CDS |
| ATTCAACACTTACTGGTTGA+TGG | 0.393983 | 8:-1076999 | MsG0880041912.01.T01:CDS |
| CAGTTGGTATGACAGTTTGT+AGG | 0.408046 | 8:-1076916 | MsG0880041912.01.T01:CDS |
| TTTGTTTCAAAGAGTTCAAT+TGG | 0.412369 | 8:+1076350 | None:intergenic |
| GTCAAGTGGGGCAATGCTGC+TGG | 0.420167 | 8:-1076719 | MsG0880041912.01.T01:CDS |
| AATCAGACTCATATTATCAT+TGG | 0.423314 | 8:-1076780 | MsG0880041912.01.T01:CDS |
| TCTCCATTGGCCATCATTGA+AGG | 0.427709 | 8:+1076886 | None:intergenic |
| ATTTCTGAAGGGCTCTCCAT+TGG | 0.442818 | 8:+1076873 | None:intergenic |
| ATGACACTGAATATGAAGAT+TGG | 0.449152 | 8:-1077240 | MsG0880041912.01.T01:CDS |
| TTATGATGAAGTAGTATTCA+AGG | 0.449801 | 8:-1076840 | MsG0880041912.01.T01:CDS |
| GTTAACAATTGGGAGGCATA+TGG | 0.457775 | 8:-1076758 | MsG0880041912.01.T01:CDS |
| AGGACTTGGGCCTTCAATGA+TGG | 0.484180 | 8:-1076896 | MsG0880041912.01.T01:CDS |
| ATCCATTTACATAGAAAGGT+TGG | 0.484246 | 8:+1077020 | None:intergenic |
| ACATGCATACACACTCTGGC+TGG | 0.489169 | 8:-1077369 | None:intergenic |
| CGATGCACCTCTGACTCCTC+TGG | 0.493066 | 8:-1076436 | MsG0880041912.01.T01:CDS |
| TACGTACCCATAAGTTAAGA+TGG | 0.495593 | 8:+1077192 | None:intergenic |
| TGGCTGGGTAACATAACATA+TGG | 0.496590 | 8:-1077353 | MsG0880041912.01.T01:exon |
| CTTCACTCACCACAAAATCC+AGG | 0.501627 | 8:+1076816 | None:intergenic |
| TATGACAGTTTGTAGGACTT+GGG | 0.504511 | 8:-1076909 | MsG0880041912.01.T01:CDS |
| TGGCAGATGGTGCAAAAGAA+AGG | 0.506336 | 8:-1077064 | MsG0880041912.01.T01:CDS |
| TGAAGTAGTATTCAAGGCCC+TGG | 0.508682 | 8:-1076834 | MsG0880041912.01.T01:CDS |
| TTCAAACATGCATTCTCAGT+TGG | 0.518806 | 8:-1076932 | MsG0880041912.01.T01:CDS |
| TTGTAGTAGCCTCTGAGAGT+TGG | 0.519117 | 8:+1076659 | None:intergenic |
| TGACACTGAATATGAAGATT+GGG | 0.520692 | 8:-1077239 | MsG0880041912.01.T01:CDS |
| ATCAAATGCAGTTGAGCTGA+AGG | 0.526679 | 8:+1077261 | None:intergenic |
| GCAAAGCACAGTATGTCAAG+TGG | 0.532392 | 8:-1076733 | MsG0880041912.01.T01:CDS |
| CATCATCAGAGGTCAAGTTA+AGG | 0.540046 | 8:+1076696 | None:intergenic |
| CATGCATACACACTCTGGCT+GGG | 0.554834 | 8:-1077368 | None:intergenic |
| AAAGTGATGGTGATTTCTGA+AGG | 0.556976 | 8:+1076861 | None:intergenic |
| CGGACGAGTCGACAAGAGGA+AGG | 0.559006 | 8:-1076967 | MsG0880041912.01.T01:CDS |
| CAAAGCACAGTATGTCAAGT+GGG | 0.561874 | 8:-1076732 | MsG0880041912.01.T01:CDS |
| GTGAAATGGAGGAAGCTGAA+TGG | 0.564983 | 8:-1077084 | MsG0880041912.01.T01:CDS |
| CAATACATGCATACACACTC+TGG | 0.570822 | 8:-1077373 | None:intergenic |
| TGGTTTAAGGAGTGAAATGG+AGG | 0.578038 | 8:-1077095 | MsG0880041912.01.T01:intron |
| ATCATTGGTTAACAATTGGG+AGG | 0.578607 | 8:-1076765 | MsG0880041912.01.T01:CDS |
| AACTCTCAGAGGCTACTACA+AGG | 0.578621 | 8:-1076657 | MsG0880041912.01.T01:CDS |
| GACAAGAGGAAGGGTCACTC+AGG | 0.585832 | 8:-1076957 | MsG0880041912.01.T01:CDS |
| GCTGCGGACGAGTCGACAAG+AGG | 0.586696 | 8:-1076971 | MsG0880041912.01.T01:CDS |
| GGGCCTTCAATGATGGCCAA+TGG | 0.595028 | 8:-1076889 | MsG0880041912.01.T01:CDS |
| CGTATCACCAGAGGAGTCAG+AGG | 0.597961 | 8:+1076429 | None:intergenic |
| TTCTCACATCCAACTCTCAG+AGG | 0.605503 | 8:-1076668 | MsG0880041912.01.T01:CDS |
| CTGGTTGATGGTATTTGCTG+CGG | 0.606752 | 8:-1076987 | MsG0880041912.01.T01:CDS |
| ACTACTTCATCATAAAGTGA+TGG | 0.615191 | 8:+1076848 | None:intergenic |
| AACAATTGGGAGGCATATGG+TGG | 0.626650 | 8:-1076755 | MsG0880041912.01.T01:CDS |
| TTCACTCACCACAAAATCCA+GGG | 0.626794 | 8:+1076817 | None:intergenic |
| GGACGAGTCGACAAGAGGAA+GGG | 0.630959 | 8:-1076966 | MsG0880041912.01.T01:CDS |
| AAGTGATGGTGATTTCTGAA+GGG | 0.650216 | 8:+1076862 | None:intergenic |
| CTACTACAAGGACCATGTCA+AGG | 0.659291 | 8:-1076645 | MsG0880041912.01.T01:intron |
| GGAGGAAGCTGAATGGCAGA+TGG | 0.662800 | 8:-1077077 | MsG0880041912.01.T01:CDS |
| GCTAGGAACTTACCTTGACA+TGG | 0.669271 | 8:+1076633 | None:intergenic |
| AAAGCACAGTATGTCAAGTG+GGG | 0.694927 | 8:-1076731 | MsG0880041912.01.T01:CDS |
| TACCTGTAACGTATCACCAG+AGG | 0.699288 | 8:+1076420 | None:intergenic |
| GAGGAGTCAGAGGTGCATCG+AGG | 0.724283 | 8:+1076439 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAATATATATGGTTTT+TGG | - | Chr8:1076575-1076594 | MsG0880041912.01.T01:intron | 10.0% |
| !! | ATTATTATTATTAGAGTCTT+AGG | - | Chr8:1076523-1076542 | MsG0880041912.01.T01:CDS | 15.0% |
| !! | TGTTAATTCTAATTAACTTT+AGG | - | Chr8:1076547-1076566 | MsG0880041912.01.T01:intron | 15.0% |
| !!! | AATTAGTTTAAAAAGAAAAC+AGG | + | Chr8:1077110-1077129 | None:intergenic | 15.0% |
| !!! | GTTTTCTTTTTAAACTAATT+TGG | - | Chr8:1077110-1077129 | MsG0880041912.01.T01:intron | 15.0% |
| !! | GGCACTTAATTAAATATATA+TGG | - | Chr8:1076568-1076587 | MsG0880041912.01.T01:intron | 20.0% |
| !!! | ATTATCATTGGTTAACAATT+GGG | - | Chr8:1076922-1076941 | MsG0880041912.01.T01:CDS | 20.0% |
| !!! | TATATATGGTTTTTGGTTTA+AGG | - | Chr8:1076582-1076601 | MsG0880041912.01.T01:intron | 20.0% |
| !!! | TATTATCATTGGTTAACAAT+TGG | - | Chr8:1076921-1076940 | MsG0880041912.01.T01:CDS | 20.0% |
| ! | AATAGTGAGAAAAATGAGAA+AGG | + | Chr8:1076399-1076418 | None:intergenic | 25.0% |
| ! | AATCAGACTCATATTATCAT+TGG | - | Chr8:1076910-1076929 | MsG0880041912.01.T01:CDS | 25.0% |
| ! | ACTCACAAATATCACTTATA+AGG | - | Chr8:1077190-1077209 | MsG0880041912.01.T01:intron | 25.0% |
| ! | CAAATTCCATCTTAACTTAT+GGG | - | Chr8:1076492-1076511 | MsG0880041912.01.T01:CDS | 25.0% |
| ! | GAAAGGAAATAACACATAAT+TGG | + | Chr8:1076382-1076401 | None:intergenic | 25.0% |
| ! | GATCAATCAAGAAATAGTAT+AGG | + | Chr8:1077138-1077157 | None:intergenic | 25.0% |
| ! | TTATGATGAAGTAGTATTCA+AGG | - | Chr8:1076850-1076869 | MsG0880041912.01.T01:CDS | 25.0% |
| ! | TTGAATCCATTTACATAGAA+AGG | + | Chr8:1076677-1076696 | None:intergenic | 25.0% |
| ! | TTTGTTTCAAAGAGTTCAAT+TGG | + | Chr8:1077343-1077362 | None:intergenic | 25.0% |
| ACTACTTCATCATAAAGTGA+TGG | + | Chr8:1076845-1076864 | None:intergenic | 30.0% | |
| ATCCATTTACATAGAAAGGT+TGG | + | Chr8:1076673-1076692 | None:intergenic | 30.0% | |
| ATGACACTGAATATGAAGAT+TGG | - | Chr8:1076450-1076469 | MsG0880041912.01.T01:CDS | 30.0% | |
| CCAAATTCCATCTTAACTTA+TGG | - | Chr8:1076491-1076510 | MsG0880041912.01.T01:CDS | 30.0% | |
| CCATAAGTTAAGATGGAATT+TGG | + | Chr8:1076494-1076513 | None:intergenic | 30.0% | |
| TGACACTGAATATGAAGATT+GGG | - | Chr8:1076451-1076470 | MsG0880041912.01.T01:CDS | 30.0% | |
| ! | AAGATCCAACAATTTTTGCT+TGG | - | Chr8:1077213-1077232 | MsG0880041912.01.T01:CDS | 30.0% |
| ! | AGATCCAACAATTTTTGCTT+GGG | - | Chr8:1077214-1077233 | MsG0880041912.01.T01:CDS | 30.0% |
| ! | TAAATGGATTCAACACTTAC+TGG | - | Chr8:1076684-1076703 | MsG0880041912.01.T01:CDS | 30.0% |
| !!! | AACAGGAAGCATTAAGTTTT+AGG | + | Chr8:1077093-1077112 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTAAGGAGTGAAA+TGG | - | Chr8:1076592-1076611 | MsG0880041912.01.T01:intron | 30.0% |
| GACCAACCTTTCTATGTAAA+TGG | - | Chr8:1076668-1076687 | MsG0880041912.01.T01:CDS | 35.0% | |
| TACGTACCCATAAGTTAAGA+TGG | + | Chr8:1076501-1076520 | None:intergenic | 35.0% | |
| TATGACAGTTTGTAGGACTT+GGG | - | Chr8:1076781-1076800 | MsG0880041912.01.T01:CDS | 35.0% | |
| TGAGAAAAAGTCATCATCAG+AGG | + | Chr8:1077008-1077027 | None:intergenic | 35.0% | |
| TTCAAACATGCATTCTCAGT+TGG | - | Chr8:1076758-1076777 | MsG0880041912.01.T01:CDS | 35.0% | |
| ! | AAAGTGATGGTGATTTCTGA+AGG | + | Chr8:1076832-1076851 | None:intergenic | 35.0% |
| ! | AAGTGATGGTGATTTCTGAA+GGG | + | Chr8:1076831-1076850 | None:intergenic | 35.0% |
| ! | ATCATTGGTTAACAATTGGG+AGG | - | Chr8:1076925-1076944 | MsG0880041912.01.T01:CDS | 35.0% |
| ! | ATTCAACACTTACTGGTTGA+TGG | - | Chr8:1076691-1076710 | MsG0880041912.01.T01:CDS | 35.0% |
| !! | TTTTAGGTACATCTCAAGCT+AGG | + | Chr8:1077077-1077096 | None:intergenic | 35.0% |
| AAAGCACAGTATGTCAAGTG+GGG | - | Chr8:1076959-1076978 | MsG0880041912.01.T01:CDS | 40.0% | |
| AGCTCCCAAGCAAAAATTGT+TGG | + | Chr8:1077221-1077240 | None:intergenic | 40.0% | |
| ATCAAATGCAGTTGAGCTGA+AGG | + | Chr8:1076432-1076451 | None:intergenic | 40.0% | |
| CAAAGCACAGTATGTCAAGT+GGG | - | Chr8:1076958-1076977 | MsG0880041912.01.T01:CDS | 40.0% | |
| CATCATCAGAGGTCAAGTTA+AGG | + | Chr8:1076997-1077016 | None:intergenic | 40.0% | |
| GTATGACAGTTTGTAGGACT+TGG | - | Chr8:1076780-1076799 | MsG0880041912.01.T01:CDS | 40.0% | |
| GTTGGTCATTCACTGCAAAT+TGG | + | Chr8:1076655-1076674 | None:intergenic | 40.0% | |
| TGGCTGGGTAACATAACATA+TGG | - | Chr8:1076337-1076356 | MsG0880041912.01.T01:CDS | 40.0% | |
| TGGTTTAAGGAGTGAAATGG+AGG | - | Chr8:1076595-1076614 | MsG0880041912.01.T01:intron | 40.0% | |
| TTCACTCACCACAAAATCCA+GGG | + | Chr8:1076876-1076895 | None:intergenic | 40.0% | |
| ! | CAGTTGGTATGACAGTTTGT+AGG | - | Chr8:1076774-1076793 | MsG0880041912.01.T01:CDS | 40.0% |
| ! | GTTAACAATTGGGAGGCATA+TGG | - | Chr8:1076932-1076951 | MsG0880041912.01.T01:CDS | 40.0% |
| AACTCTCAGAGGCTACTACA+AGG | - | Chr8:1077033-1077052 | MsG0880041912.01.T01:CDS | 45.0% | |
| CTACTACAAGGACCATGTCA+AGG | - | Chr8:1077045-1077064 | MsG0880041912.01.T01:CDS | 45.0% | |
| CTTCACTCACCACAAAATCC+AGG | + | Chr8:1076877-1076896 | None:intergenic | 45.0% | |
| GCAAAGCACAGTATGTCAAG+TGG | - | Chr8:1076957-1076976 | MsG0880041912.01.T01:CDS | 45.0% | |
| GCTAGGAACTTACCTTGACA+TGG | + | Chr8:1077060-1077079 | None:intergenic | 45.0% | |
| GTGAAATGGAGGAAGCTGAA+TGG | - | Chr8:1076606-1076625 | MsG0880041912.01.T01:intron | 45.0% | |
| TACCTGTAACGTATCACCAG+AGG | + | Chr8:1077273-1077292 | None:intergenic | 45.0% | |
| TCTCCATTGGCCATCATTGA+AGG | + | Chr8:1076807-1076826 | None:intergenic | 45.0% | |
| TGAAGTAGTATTCAAGGCCC+TGG | - | Chr8:1076856-1076875 | MsG0880041912.01.T01:CDS | 45.0% | |
| TGGCAGATGGTGCAAAAGAA+AGG | - | Chr8:1076626-1076645 | MsG0880041912.01.T01:intron | 45.0% | |
| TTCTCACATCCAACTCTCAG+AGG | - | Chr8:1077022-1077041 | MsG0880041912.01.T01:CDS | 45.0% | |
| ! | AACAATTGGGAGGCATATGG+TGG | - | Chr8:1076935-1076954 | MsG0880041912.01.T01:CDS | 45.0% |
| ! | ATTCAAGGCCCTGGATTTTG+TGG | - | Chr8:1076865-1076884 | MsG0880041912.01.T01:CDS | 45.0% |
| ! | ATTTCTGAAGGGCTCTCCAT+TGG | + | Chr8:1076820-1076839 | None:intergenic | 45.0% |
| ! | TTGTAGTAGCCTCTGAGAGT+TGG | + | Chr8:1077034-1077053 | None:intergenic | 45.0% |
| !! | CTGGTTGATGGTATTTGCTG+CGG | - | Chr8:1076703-1076722 | MsG0880041912.01.T01:CDS | 45.0% |
| AGGACTTGGGCCTTCAATGA+TGG | - | Chr8:1076794-1076813 | MsG0880041912.01.T01:CDS | 50.0% | |
| CTCCTCTGGTGATACGTTAC+AGG | - | Chr8:1077268-1077287 | MsG0880041912.01.T01:CDS | 50.0% | |
| CGTATCACCAGAGGAGTCAG+AGG | + | Chr8:1077264-1077283 | None:intergenic | 55.0% | |
| GACAAGAGGAAGGGTCACTC+AGG | - | Chr8:1076733-1076752 | MsG0880041912.01.T01:CDS | 55.0% | |
| GGACGAGTCGACAAGAGGAA+GGG | - | Chr8:1076724-1076743 | MsG0880041912.01.T01:CDS | 55.0% | |
| GGAGGAAGCTGAATGGCAGA+TGG | - | Chr8:1076613-1076632 | MsG0880041912.01.T01:intron | 55.0% | |
| GGGCCTTCAATGATGGCCAA+TGG | - | Chr8:1076801-1076820 | MsG0880041912.01.T01:CDS | 55.0% | |
| CGATGCACCTCTGACTCCTC+TGG | - | Chr8:1077254-1077273 | MsG0880041912.01.T01:CDS | 60.0% | |
| CGGACGAGTCGACAAGAGGA+AGG | - | Chr8:1076723-1076742 | MsG0880041912.01.T01:CDS | 60.0% | |
| GTCAAGTGGGGCAATGCTGC+TGG | - | Chr8:1076971-1076990 | MsG0880041912.01.T01:CDS | 60.0% | |
| ! | GAGGAGTCAGAGGTGCATCG+AGG | + | Chr8:1077254-1077273 | None:intergenic | 60.0% |
| GCTGCGGACGAGTCGACAAG+AGG | - | Chr8:1076719-1076738 | MsG0880041912.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 1076327 | 1077385 | 1076327 | ID=MsG0880041912.01;Name=MsG0880041912.01 |
| Chr8 | mRNA | 1076327 | 1077385 | 1076327 | ID=MsG0880041912.01.T01;Parent=MsG0880041912.01;Name=MsG0880041912.01.T01;_AED=0.44;_eAED=0.44;_QI=29|1|0.66|1|1|1|3|0|279 |
| Chr8 | exon | 1077199 | 1077385 | 1077199 | ID=MsG0880041912.01.T01:exon:17;Parent=MsG0880041912.01.T01 |
| Chr8 | exon | 1076646 | 1077108 | 1076646 | ID=MsG0880041912.01.T01:exon:18;Parent=MsG0880041912.01.T01 |
| Chr8 | exon | 1076327 | 1076545 | 1076327 | ID=MsG0880041912.01.T01:exon:19;Parent=MsG0880041912.01.T01 |
| Chr8 | five_prime_UTR | 1077357 | 1077385 | 1077357 | ID=MsG0880041912.01.T01:five_prime_utr;Parent=MsG0880041912.01.T01 |
| Chr8 | CDS | 1077199 | 1077356 | 1077199 | ID=MsG0880041912.01.T01:cds;Parent=MsG0880041912.01.T01 |
| Chr8 | CDS | 1076646 | 1077108 | 1076646 | ID=MsG0880041912.01.T01:cds;Parent=MsG0880041912.01.T01 |
| Chr8 | CDS | 1076327 | 1076545 | 1076327 | ID=MsG0880041912.01.T01:cds;Parent=MsG0880041912.01.T01 |
| Gene Sequence |
| Protein sequence |
