AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001612.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001612.01.T01 MTR_1g040020 94.158 291 13 1 83 373 40 326 0.0 549
MsG0180001612.01.T01 MTR_7g100410 28.030 132 88 1 134 265 66 190 6.79e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001612.01.T01 AT4G28360 60.081 248 90 5 71 317 30 269 7.57e-91 274
MsG0180001612.01.T01 AT1G52370 65.700 207 66 2 98 304 54 255 1.28e-82 253
MsG0180001612.01.T01 AT1G52370 65.700 207 66 2 98 304 54 255 1.28e-82 253
MsG0180001612.01.T01 AT1G52370 65.700 207 66 2 98 304 54 255 1.28e-82 253
MsG0180001612.01.T01 AT1G52370 65.700 207 66 2 98 304 54 255 1.28e-82 253
MsG0180001612.01.T01 ATCG00810 31.818 110 75 0 154 263 12 121 1.08e-13 68.9

Find 82 sgRNAs with CRISPR-Local

Find 627 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGTTTGATTTATGTTTA+TGG 0.148230 1:-24078894 MsG0180001612.01.T01:three_prime_UTR
GCAACCAAGTTGACCTTCTT+TGG 0.202936 1:+24079948 None:intergenic
CGTGCCATACAGGGATATTT+TGG 0.259277 1:-24089396 MsG0180001612.01.T01:CDS
CATTCATCTCATACCTTTCT+CGG 0.277395 1:+24089117 None:intergenic
GGTCAACTTGGTTGCTGCTT+TGG 0.281050 1:-24079940 MsG0180001612.01.T01:CDS
ATGAAACTTGCAATTAAATA+AGG 0.304656 1:+24078914 None:intergenic
TATTGAGACCACTCCTGTTT+GGG 0.305553 1:-24079159 MsG0180001612.01.T01:CDS
TCATACCTTTCTCGGCCTTT+TGG 0.314803 1:+24089125 None:intergenic
CAATAGAGCTGCACATGATT+TGG 0.324533 1:-24089465 MsG0180001612.01.T01:CDS
AAACGAGACCACACCTGTTA+AGG 0.357620 1:-24079015 MsG0180001612.01.T01:CDS
ATCACAAGACCACTCGTGTT+TGG 0.368062 1:-24079067 MsG0180001612.01.T01:CDS
TAATACATAATCTAGGCATT+TGG 0.370055 1:+24078781 None:intergenic
TTATTGAGACCACTCCTGTT+TGG 0.371095 1:-24079160 MsG0180001612.01.T01:CDS
TTATTTAATTGCAAGTTTCA+TGG 0.376631 1:-24078912 MsG0180001612.01.T01:three_prime_UTR
AAAGCCAAGCCGTGCCATAC+AGG 0.394409 1:-24089406 MsG0180001612.01.T01:CDS
TGCACATGATTTGGTCTTGT+GGG 0.397370 1:-24089456 MsG0180001612.01.T01:CDS
AGACGAGACCACTCCTGTTC+GGG 0.401877 1:-24079111 MsG0180001612.01.T01:CDS
TCACAAGACCACTCGTGTTT+GGG 0.406538 1:-24079066 MsG0180001612.01.T01:CDS
GTTGAGAAATATGCAGACTA+AGG 0.409012 1:-24078829 MsG0180001612.01.T01:three_prime_UTR
AGATCTTCCTTTGCCATGGA+TGG 0.415454 1:+24079325 None:intergenic
AACGAGACCACACCTGTTAA+GGG 0.417185 1:-24079014 MsG0180001612.01.T01:CDS
TGGCAGGAATGCTAATGAAA+TGG 0.420806 1:-24089376 MsG0180001612.01.T01:CDS
TTGGTTGCTGCTTTGGTTCG+TGG 0.425968 1:-24079933 MsG0180001612.01.T01:CDS
ATCCATGGCAAAGGAAGATC+TGG 0.427839 1:-24079323 MsG0180001612.01.T01:CDS
TGGCTTTGTGAAGAGATATA+TGG 0.430990 1:+24089422 None:intergenic
AAAATTCTAATACATAATCT+AGG 0.435442 1:+24078774 None:intergenic
GATTGTGAGAAGCGTTTGCT+CGG 0.435749 1:+24079514 None:intergenic
TTAGTTCCAGTTTCATCATT+CGG 0.436163 1:-24083020 MsG0180001612.01.T01:CDS
GAACTACCGAATGATGAAAC+TGG 0.439490 1:+24083014 None:intergenic
GGAACTAAAGGCGACGAAAC+AGG 0.440525 1:+24083035 None:intergenic
AAAATTTAAACTTGAATTGG+TGG 0.453900 1:-24089319 MsG0180001612.01.T01:CDS
TCTTACAGCTGAAGCATTTG+TGG 0.454900 1:-24079375 MsG0180001612.01.T01:intron
AAGACGAGACCACTCCTGTT+CGG 0.458166 1:-24079112 MsG0180001612.01.T01:CDS
CTTACAGCTGAAGCATTTGT+GGG 0.464301 1:-24079374 MsG0180001612.01.T01:intron
AATGAGAATAATACCGATCA+TGG 0.464413 1:+24078713 None:intergenic
TATTGAAAACGGTGATCAAA+AGG 0.481092 1:+24084846 None:intergenic
AATATACCTGATATTGAAAA+CGG 0.481833 1:+24084835 None:intergenic
AAATTTAAACTTGAATTGGT+GGG 0.483708 1:-24089318 MsG0180001612.01.T01:CDS
ACAACTGTTAGCCTACATTC+TGG 0.484826 1:+24079287 None:intergenic
AGCTGAAGCATTTGTGGGAA+AGG 0.485918 1:-24079369 MsG0180001612.01.T01:CDS
TTCCAGATCTTCCTTTGCCA+TGG 0.488317 1:+24079321 None:intergenic
GCAAACGCTTCTCACAATCA+TGG 0.490598 1:-24079510 MsG0180001612.01.T01:CDS
AAGAAGAGAGTTTCCATCCA+TGG 0.493272 1:-24079338 MsG0180001612.01.T01:CDS
AATGCTGATCGCCTAATTGT+TGG 0.504719 1:-24079483 MsG0180001612.01.T01:intron
AATATTAAAGAAAATAAAGC+AGG 0.507004 1:-24082937 MsG0180001612.01.T01:intron
TTACAGAGGCAATGGTCAAA+AGG 0.509414 1:-24084888 MsG0180001612.01.T01:CDS
GTTGCAAGTGTTGGTAAAGC+GGG 0.511590 1:-24079883 MsG0180001612.01.T01:CDS
TCAAAAGGCCTTGAGATACT+TGG 0.512610 1:+24084861 None:intergenic
CTGCACATGATTTGGTCTTG+TGG 0.515080 1:-24089457 MsG0180001612.01.T01:CDS
CTTAGCCAAAAGGCCGAGAA+AGG 0.518499 1:-24089130 MsG0180001612.01.T01:intron
GCTGAAGCATTTGTGGGAAA+GGG 0.521445 1:-24079368 MsG0180001612.01.T01:CDS
TATCCCTGTATGGCACGGCT+TGG 0.524807 1:+24089402 None:intergenic
AATGATGAAACTGGAACTAA+AGG 0.526148 1:+24083023 None:intergenic
TACACTTGATCTTAGCCAAA+AGG 0.527052 1:-24089140 MsG0180001612.01.T01:CDS
AATTTAAACTTGAATTGGTG+GGG 0.532529 1:-24089317 MsG0180001612.01.T01:intron
AGAGATTACCCCTGAAGAAG+AGG 0.533567 1:-24079258 MsG0180001612.01.T01:CDS
CCTGCCAAAATATCCCTGTA+TGG 0.536542 1:+24089392 None:intergenic
CTTTAAGAAGCTAACTAAGA+AGG 0.537412 1:-24079207 MsG0180001612.01.T01:CDS
CAGGAGTGGTCTCAATAAGC+TGG 0.554575 1:+24079165 None:intergenic
TGTATTTCAGAGTCCAAAGA+AGG 0.555548 1:-24079961 MsG0180001612.01.T01:intron
CTGGTTCAAATCTGGCACAT+TGG 0.565615 1:+24089346 None:intergenic
CAAACGCTTCTCACAATCAT+GGG 0.566009 1:-24079509 MsG0180001612.01.T01:CDS
CAAAATATCCCTGTATGGCA+CGG 0.574892 1:+24089397 None:intergenic
TAGGTCAGTTACAGAGGCAA+TGG 0.576561 1:-24084896 MsG0180001612.01.T01:CDS
TCATCATTCGGTAGTTCACA+AGG 0.579982 1:-24083008 MsG0180001612.01.T01:CDS
GAGTCCAAAGAAGGTCAACT+TGG 0.587341 1:-24079952 MsG0180001612.01.T01:CDS
AAGCCAAGCCGTGCCATACA+GGG 0.589546 1:-24089405 MsG0180001612.01.T01:CDS
ATTGTGAGAAGCGTTTGCTC+GGG 0.592593 1:+24079515 None:intergenic
ATTGAGACCACTCCTGTTTG+GGG 0.595488 1:-24079158 MsG0180001612.01.T01:CDS
TCATGCACAGACCAGAATGT+AGG 0.597465 1:-24079298 MsG0180001612.01.T01:CDS
TAAGAAGCTAACTAAGAAGG+AGG 0.597695 1:-24079204 MsG0180001612.01.T01:CDS
TTTGCTGCAGTTGCAAGTGT+TGG 0.600894 1:-24079892 MsG0180001612.01.T01:CDS
AGAGTTTCCATCCATGGCAA+AGG 0.604435 1:-24079332 MsG0180001612.01.T01:CDS
GTGGTCTCAATAAGCTGGTG+TGG 0.608149 1:+24079170 None:intergenic
ATGTGCAGCTCTATTGAATG+TGG 0.614289 1:+24089472 None:intergenic
AAGAAGCTAACTAAGAAGGA+GGG 0.617043 1:-24079203 MsG0180001612.01.T01:CDS
TTTGGAACTAGAACTAGTCT+CGG 0.620263 1:+24078799 None:intergenic
GTATTGTAGGTCAGTTACAG+AGG 0.626522 1:-24084902 MsG0180001612.01.T01:intron
AGTTGCAAGTGTTGGTAAAG+CGG 0.628215 1:-24079884 MsG0180001612.01.T01:CDS
CTTTGTGAAGAGATATATGG+TGG 0.629799 1:+24089425 None:intergenic
AAGGTGTGCCAAGTATCTCA+AGG 0.633194 1:-24084869 MsG0180001612.01.T01:CDS
AAACACGAGTGGTCTTGTGA+TGG 0.636084 1:+24079069 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAATATATTATATTTAA+TGG + Chr1:24087699-24087718 None:intergenic 0.0%
!! ATTTAATTAAAAATTAAATT+AGG - Chr1:24085789-24085808 MsG0180001612.01.T01:intron 0.0%
!! ACAACTAAAAAATATAAAAA+TGG + Chr1:24083222-24083241 None:intergenic 10.0%
!! ACTAAATATAAATTAATTGA+AGG - Chr1:24086319-24086338 MsG0180001612.01.T01:intron 10.0%
!! ATAAAAATTTAAACTTGAAT+TGG - Chr1:24078875-24078894 MsG0180001612.01.T01:three_prime_UTR 10.0%
!! ATAATAGCATTAAATTAAAT+AGG - Chr1:24086353-24086372 MsG0180001612.01.T01:intron 10.0%
!! ATACTTATGATAAATTAAAT+AGG - Chr1:24081425-24081444 MsG0180001612.01.T01:intron 10.0%
!! ATATATAATATGTTTATTGA+TGG + Chr1:24080359-24080378 None:intergenic 10.0%
!! CAACTAAAAAATATAAAAAT+GGG + Chr1:24083221-24083240 None:intergenic 10.0%
!! CTAAATATAAATTAATTGAA+GGG - Chr1:24086320-24086339 MsG0180001612.01.T01:intron 10.0%
!! CTAATACAATAAAATATATA+TGG + Chr1:24088547-24088566 None:intergenic 10.0%
!! TAAAAAACTATACTAAAAAT+TGG + Chr1:24081453-24081472 None:intergenic 10.0%
!! TAATAGCATTAAATTAAATA+GGG - Chr1:24086354-24086373 MsG0180001612.01.T01:intron 10.0%
!!! ATATAATATATTACATTTTG+AGG + Chr1:24081400-24081419 None:intergenic 10.0%
!!! ATATTAAATTACTTTTTTGA+GGG + Chr1:24078985-24079004 None:intergenic 10.0%
!!! ATTTTAATTTATCACTAAAA+TGG - Chr1:24085461-24085480 MsG0180001612.01.T01:intron 10.0%
!!! TACTTTTATCATATTTAATT+GGG + Chr1:24086826-24086845 None:intergenic 10.0%
!!! TTTTAATTTATCACTAAAAT+GGG - Chr1:24085462-24085481 MsG0180001612.01.T01:intron 10.0%
!! AAAAAATATTACCAACAATT+AGG + Chr1:24088728-24088747 None:intergenic 15.0%
!! AAAAATAGGTTAAGATTATT+TGG - Chr1:24084616-24084635 MsG0180001612.01.T01:intron 15.0%
!! AAAATTCTAATACATAATCT+AGG + Chr1:24089426-24089445 None:intergenic 15.0%
!! AAATAAAAGAATTTACATCT+TGG - Chr1:24085889-24085908 MsG0180001612.01.T01:intron 15.0%
!! AATAAAAGAATTTACATCTT+GGG - Chr1:24085890-24085909 MsG0180001612.01.T01:intron 15.0%
!! AATACAATATAACAACTTTA+TGG - Chr1:24081309-24081328 MsG0180001612.01.T01:intron 15.0%
!! AATATTAAAGAAAATAAAGC+AGG - Chr1:24085260-24085279 MsG0180001612.01.T01:intron 15.0%
!! AATTAAAATACTCTAAACTA+AGG + Chr1:24081619-24081638 None:intergenic 15.0%
!! AGAAAATTCAATTATTTGAT+CGG + Chr1:24081533-24081552 None:intergenic 15.0%
!! ATACAATAAAATATATATGG+CGG + Chr1:24088544-24088563 None:intergenic 15.0%
!! ATATTATATATGTTCAACTT+CGG - Chr1:24080368-24080387 MsG0180001612.01.T01:intron 15.0%
!! CTCAAAAAAAAAATATTCAT+GGG + Chr1:24081207-24081226 None:intergenic 15.0%
!! GTATCTTCTTTATATATAAT+AGG + Chr1:24081559-24081578 None:intergenic 15.0%
!! GTTAGTAATTTAAATAAATG+AGG + Chr1:24087002-24087021 None:intergenic 15.0%
!! TAAAAGGTAGAATTAATATT+TGG - Chr1:24080565-24080584 MsG0180001612.01.T01:intron 15.0%
!! TCTCAAAAAAAAAATATTCA+TGG + Chr1:24081208-24081227 None:intergenic 15.0%
!! TGACAAAATTATGAATAAAA+TGG + Chr1:24081502-24081521 None:intergenic 15.0%
!! TGTTCTAATATATTATTAGA+TGG - Chr1:24080702-24080721 MsG0180001612.01.T01:intron 15.0%
!! TTAGTCATACAAAATTAAAT+CGG + Chr1:24082278-24082297 None:intergenic 15.0%
!!! AAATTAAATTTGTTTTTGAG+AGG + Chr1:24081372-24081391 None:intergenic 15.0%
!!! AAATTTTATTATTTGCAACA+AGG + Chr1:24089455-24089474 None:intergenic 15.0%
!!! ATATTGTTTTTATGAATCAT+GGG - Chr1:24082929-24082948 MsG0180001612.01.T01:intron 15.0%
!!! ATTGTTTGTTAAATTGTTTT+TGG - Chr1:24084722-24084741 MsG0180001612.01.T01:intron 15.0%
!!! CTACTTTTATCATATTTAAT+TGG + Chr1:24086827-24086846 None:intergenic 15.0%
!!! GAAAAATGAGATTTTTTTTT+GGG - Chr1:24082883-24082902 MsG0180001612.01.T01:intron 15.0%
!!! GATATTAAATTACTTTTTTG+AGG + Chr1:24078986-24079005 None:intergenic 15.0%
!!! TATTAAATTACTTTTTTGAG+GGG + Chr1:24078984-24079003 None:intergenic 15.0%
!!! TCAAGTTTAAATTTTTATTC+TGG + Chr1:24078873-24078892 None:intergenic 15.0%
!!! TGGTTTTCATATAATAAATA+GGG - Chr1:24085499-24085518 MsG0180001612.01.T01:intron 15.0%
!!! TTGGATTTTTTTTTTATTGA+GGG + Chr1:24080936-24080955 None:intergenic 15.0%
!!! TTGTTTGTTAAATTGTTTTT+GGG - Chr1:24084723-24084742 MsG0180001612.01.T01:intron 15.0%
!!! TTTGGATTTTTTTTTTATTG+AGG + Chr1:24080937-24080956 None:intergenic 15.0%
!! AAAAAAAATATTCATGGGTT+TGG + Chr1:24081202-24081221 None:intergenic 20.0%
!! AAAAGTAATTTAATATCGTG+TGG - Chr1:24078989-24079008 MsG0180001612.01.T01:CDS 20.0%
!! AAAATTTAAACTTGAATTGG+TGG - Chr1:24078878-24078897 MsG0180001612.01.T01:three_prime_UTR 20.0%
!! AAAGAAAGAATACTCTTAAT+GGG + Chr1:24084419-24084438 None:intergenic 20.0%
!! AAATAAATTGCTTACTTTAG+CGG - Chr1:24081167-24081186 MsG0180001612.01.T01:intron 20.0%
!! AAATTAATTGAAGGGATATT+AGG - Chr1:24086328-24086347 MsG0180001612.01.T01:intron 20.0%
!! AAATTTAAACTTGAATTGGT+GGG - Chr1:24078879-24078898 MsG0180001612.01.T01:three_prime_UTR 20.0%
!! AACTCAAAAGAATCAATTAT+AGG - Chr1:24082061-24082080 MsG0180001612.01.T01:intron 20.0%
!! AAGTTAAAGATTACATAAAG+TGG + Chr1:24085576-24085595 None:intergenic 20.0%
!! AATATACCTGATATTGAAAA+CGG + Chr1:24083365-24083384 None:intergenic 20.0%
!! AATTAATTGAAGGGATATTA+GGG - Chr1:24086329-24086348 MsG0180001612.01.T01:intron 20.0%
!! AATTTATGGTTTATGTTTCA+AGG - Chr1:24088186-24088205 MsG0180001612.01.T01:intron 20.0%
!! ATAAAAATGAGGTGAATAAA+TGG + Chr1:24082757-24082776 None:intergenic 20.0%
!! ATATAATAACAATGTAGTGT+AGG - Chr1:24083521-24083540 MsG0180001612.01.T01:intron 20.0%
!! ATCTTCAATTGAAATCAAAA+AGG + Chr1:24088583-24088602 None:intergenic 20.0%
!! ATGAAACTTGCAATTAAATA+AGG + Chr1:24089286-24089305 None:intergenic 20.0%
!! ATTGTATTAGATTTCATTTG+AGG - Chr1:24088557-24088576 MsG0180001612.01.T01:intron 20.0%
!! ATTTATGGTTTATGTTTCAA+GGG - Chr1:24088187-24088206 MsG0180001612.01.T01:intron 20.0%
!! CTATTTATTATATGAAAACC+AGG + Chr1:24085500-24085519 None:intergenic 20.0%
!! GAGGTTAAATACATAATTTA+TGG - Chr1:24087761-24087780 MsG0180001612.01.T01:intron 20.0%
!! GTTTACTTGATGAATAAAAT+TGG + Chr1:24081480-24081499 None:intergenic 20.0%
!! TAAAAATGAGGTGAATAAAT+GGG + Chr1:24082756-24082775 None:intergenic 20.0%
!! TAAAGAAAGAATACTCTTAA+TGG + Chr1:24084420-24084439 None:intergenic 20.0%
!! TAATTTAAATAAATGAGGCT+AGG + Chr1:24086997-24087016 None:intergenic 20.0%
!! TACGTGTAAAAATCAATTAT+AGG - Chr1:24082019-24082038 MsG0180001612.01.T01:intron 20.0%
!! TATAAACAAGTTATGTTTGT+TGG + Chr1:24086874-24086893 None:intergenic 20.0%
!! TATATTATATTTAATGGCAC+CGG + Chr1:24087693-24087712 None:intergenic 20.0%
!! TATGCTCATGATTTAATATA+GGG + Chr1:24086083-24086102 None:intergenic 20.0%
!! TCATCATTTAATGATTTAGA+TGG - Chr1:24085539-24085558 MsG0180001612.01.T01:intron 20.0%
!! TGTACAAATGTTTGAAAATA+AGG - Chr1:24083801-24083820 MsG0180001612.01.T01:intron 20.0%
!! TTATTTAATTGCAAGTTTCA+TGG - Chr1:24089285-24089304 MsG0180001612.01.T01:intron 20.0%
!!! AAAATTGATTCTGACATAAT+TGG + Chr1:24082112-24082131 None:intergenic 20.0%
!!! AAAGTCTATTTGATGATTAT+AGG + Chr1:24087229-24087248 None:intergenic 20.0%
!!! AAGACTGGTTAAAATTAATT+CGG + Chr1:24083728-24083747 None:intergenic 20.0%
!!! ACAACTTTATGGATTTTTTA+TGG - Chr1:24081320-24081339 MsG0180001612.01.T01:intron 20.0%
!!! ATAAAGAGAATAATGTGTTT+TGG + Chr1:24085939-24085958 None:intergenic 20.0%
!!! ATAATAATAGAGTTTTGTGA+TGG + Chr1:24080960-24080979 None:intergenic 20.0%
!!! ATAATATGTTTATTGATGGT+TGG + Chr1:24080355-24080374 None:intergenic 20.0%
!!! ATTAAATTACTTTTTTGAGG+GGG + Chr1:24078983-24079002 None:intergenic 20.0%
!!! ATTTGTGTTATTCTATTTCA+GGG - Chr1:24085093-24085112 MsG0180001612.01.T01:intron 20.0%
!!! CAACTTTAAAAGATTTTATC+TGG + Chr1:24079930-24079949 None:intergenic 20.0%
!!! CAACTTTATGGATTTTTTAT+GGG - Chr1:24081321-24081340 MsG0180001612.01.T01:intron 20.0%
!!! CTGGTTTTCATATAATAAAT+AGG - Chr1:24085498-24085517 MsG0180001612.01.T01:intron 20.0%
!!! GATATTGTTTTTATGAATCA+TGG - Chr1:24082928-24082947 MsG0180001612.01.T01:intron 20.0%
!!! GATTTGTGTTTAATTTTGTA+AGG - Chr1:24081950-24081969 MsG0180001612.01.T01:intron 20.0%
!!! GCTTAAAATCCATATTTTTA+TGG - Chr1:24087401-24087420 MsG0180001612.01.T01:intron 20.0%
!!! GGAAAAATGAGATTTTTTTT+TGG - Chr1:24082882-24082901 MsG0180001612.01.T01:intron 20.0%
!!! TAAAGTTTTATTCAAATTGC+AGG - Chr1:24088647-24088666 MsG0180001612.01.T01:intron 20.0%
!!! TATTGTTTTTATGAATCATG+GGG - Chr1:24082930-24082949 MsG0180001612.01.T01:intron 20.0%
!!! TATTTGTGTTATTCTATTTC+AGG - Chr1:24085092-24085111 MsG0180001612.01.T01:intron 20.0%
!!! TTTACATTCAATTTTACACT+GGG - Chr1:24085358-24085377 MsG0180001612.01.T01:intron 20.0%
!!! TTTTATTGAACTAGTCAAAA+TGG + Chr1:24080760-24080779 None:intergenic 20.0%
! AAAAAACAAATCTATCCGTA+GGG - Chr1:24089209-24089228 MsG0180001612.01.T01:intron 25.0%
! AAAATCACAGCAAAATGAAA+GGG - Chr1:24079796-24079815 MsG0180001612.01.T01:intron 25.0%
! AAAATGTCAAAATGCTAAGT+CGG + Chr1:24081731-24081750 None:intergenic 25.0%
! AAAGCAAACATACACTAAAT+AGG + Chr1:24081850-24081869 None:intergenic 25.0%
! AACAAATTAAGGATTGGATT+GGG + Chr1:24079638-24079657 None:intergenic 25.0%
! AAGCAAACATACACTAAATA+GGG + Chr1:24081849-24081868 None:intergenic 25.0%
! AAGGTTTGAACAAGAAAAAT+AGG - Chr1:24084602-24084621 MsG0180001612.01.T01:intron 25.0%
! AATCGAAAACAAAAAGGAAA+AGG + Chr1:24088479-24088498 None:intergenic 25.0%
! AATTTAAACTTGAATTGGTG+GGG - Chr1:24078880-24078899 MsG0180001612.01.T01:three_prime_UTR 25.0%
! AATTTACATCTTGGGTAAAT+TGG - Chr1:24085898-24085917 MsG0180001612.01.T01:intron 25.0%
! ACATTATTCTCTTTATCTAC+AGG - Chr1:24085943-24085962 MsG0180001612.01.T01:intron 25.0%
! ACCTACAATACCAAAAAAAA+CGG + Chr1:24083286-24083305 None:intergenic 25.0%
! ACTTGAAATCGAAAACAAAA+AGG + Chr1:24088485-24088504 None:intergenic 25.0%
! ATAGGTTAAGATTATTTGGT+TGG - Chr1:24084620-24084639 MsG0180001612.01.T01:intron 25.0%
! ATATGAATACTTGAAAGGAT+TGG + Chr1:24079725-24079744 None:intergenic 25.0%
! ATATTATATTTAATGGCACC+GGG + Chr1:24087692-24087711 None:intergenic 25.0%
! ATCGAAAACAAAAAGGAAAA+GGG + Chr1:24088478-24088497 None:intergenic 25.0%
! ATGAAAGATCAACAAATTCT+AGG + Chr1:24084480-24084499 None:intergenic 25.0%
! ATTGAGTGAAATAATGAAGT+TGG - Chr1:24082489-24082508 MsG0180001612.01.T01:intron 25.0%
! CAACAACTAATATTCATTCA+GGG - Chr1:24085988-24086007 MsG0180001612.01.T01:intron 25.0%
! CAATTCACTCAATAAATTAG+GGG - Chr1:24086049-24086068 MsG0180001612.01.T01:intron 25.0%
! CATCTAGAGAATTTAATTAG+AGG - Chr1:24080659-24080678 MsG0180001612.01.T01:intron 25.0%
! CTATGCTCATGATTTAATAT+AGG + Chr1:24086084-24086103 None:intergenic 25.0%
! CTTAACAAATTATTCACCAA+GGG - Chr1:24083745-24083764 MsG0180001612.01.T01:intron 25.0%
! GAAAGTTACTGAACAAATTA+AGG + Chr1:24079649-24079668 None:intergenic 25.0%
! GAACATAAATTGAGACATTT+AGG + Chr1:24087340-24087359 None:intergenic 25.0%
! GATCTTCTATTACTCTTTAT+AGG - Chr1:24088600-24088619 MsG0180001612.01.T01:intron 25.0%
! GCAATTCACTCAATAAATTA+GGG - Chr1:24086048-24086067 MsG0180001612.01.T01:intron 25.0%
! GCTATACTCTATTTAGTAAA+AGG - Chr1:24083482-24083501 MsG0180001612.01.T01:intron 25.0%
! GTATCAAAAGAAAAAGAGAT+TGG - Chr1:24079983-24080002 MsG0180001612.01.T01:intron 25.0%
! GTATTCTTTCTTTATAAGTG+TGG - Chr1:24084426-24084445 MsG0180001612.01.T01:intron 25.0%
! GTTAATGTGATCTCTAATTT+GGG + Chr1:24082612-24082631 None:intergenic 25.0%
! GTTATGATTTGAATTCTAAC+AGG - Chr1:24079766-24079785 MsG0180001612.01.T01:intron 25.0%
! TAATACATAATCTAGGCATT+TGG + Chr1:24089419-24089438 None:intergenic 25.0%
! TATAGTAGAAAGAGTTGAAA+GGG + Chr1:24087135-24087154 None:intergenic 25.0%
! TATTCAAATCGACGTAAATA+AGG + Chr1:24084282-24084301 None:intergenic 25.0%
! TCAGTTTAATATCTGATATG+TGG + Chr1:24079024-24079043 None:intergenic 25.0%
! TCTTAACAAATTATTCACCA+AGG - Chr1:24083744-24083763 MsG0180001612.01.T01:intron 25.0%
! TGCAATTCACTCAATAAATT+AGG - Chr1:24086047-24086066 MsG0180001612.01.T01:intron 25.0%
! TGTTAATGTGATCTCTAATT+TGG + Chr1:24082613-24082632 None:intergenic 25.0%
! TTAAGCAGTTGAATCAAAAT+TGG + Chr1:24087387-24087406 None:intergenic 25.0%
! TTACTGAACAAATTAAGGAT+TGG + Chr1:24079644-24079663 None:intergenic 25.0%
! TTGAGTGAAATAATGAAGTT+GGG - Chr1:24082490-24082509 MsG0180001612.01.T01:intron 25.0%
! TTTGTTCAGTAACTTTCATT+AGG - Chr1:24079652-24079671 MsG0180001612.01.T01:intron 25.0%
!! AAACGTTTTCTCAAAGTAAA+TGG - Chr1:24083898-24083917 MsG0180001612.01.T01:intron 25.0%
!! AACGTTTTCTCAAAGTAAAT+GGG - Chr1:24083899-24083918 MsG0180001612.01.T01:intron 25.0%
!! AACTTGTTTATATTTGAGAC+TGG - Chr1:24086882-24086901 MsG0180001612.01.T01:intron 25.0%
!! ATTTTGTACTTAACCATGAT+CGG - Chr1:24089471-24089490 MsG0180001612.01.T01:CDS 25.0%
!! CAAGTTATTCAAGTTTGTAA+GGG - Chr1:24083249-24083268 MsG0180001612.01.T01:intron 25.0%
!! CATGGTTTGATTTATGTTTA+TGG - Chr1:24089303-24089322 MsG0180001612.01.T01:intron 25.0%
!! CTTTACATTCAATTTTACAC+TGG - Chr1:24085357-24085376 MsG0180001612.01.T01:intron 25.0%
!! TAAAAGATTTTATCTGGCAA+TGG + Chr1:24079924-24079943 None:intergenic 25.0%
!! TCAAGTTATTCAAGTTTGTA+AGG - Chr1:24083248-24083267 MsG0180001612.01.T01:intron 25.0%
!! TCCTTTCAAGTATTCATATA+TGG - Chr1:24079726-24079745 MsG0180001612.01.T01:intron 25.0%
!! TGGTAACATCAAATCAATTT+TGG + Chr1:24083669-24083688 None:intergenic 25.0%
!! TGTTTCTTTTCTGTGAATTA+AGG + Chr1:24083973-24083992 None:intergenic 25.0%
!! TTTTTGTGTTATCGTTGTTT+AGG - Chr1:24087505-24087524 MsG0180001612.01.T01:intron 25.0%
!!! AATAGGCATTGATAAAAATG+AGG + Chr1:24082768-24082787 None:intergenic 25.0%
!!! AATTGTTTTTGGGAACATTA+AGG - Chr1:24084733-24084752 MsG0180001612.01.T01:intron 25.0%
!!! ACTTTTTTTTTAAGGCATTG+AGG + Chr1:24080888-24080907 None:intergenic 25.0%
!!! AGACTAACTACTTTTCTTAA+TGG + Chr1:24086201-24086220 None:intergenic 25.0%
!!! AGATGAATTTTTTAGCAACT+GGG + Chr1:24085133-24085152 None:intergenic 25.0%
!!! ATTGAGGGACTTTTTTTTTA+AGG + Chr1:24080896-24080915 None:intergenic 25.0%
!!! CTTTTTTTTTAAGGCATTGA+GGG + Chr1:24080887-24080906 None:intergenic 25.0%
!!! GACTAACTACTTTTCTTAAT+AGG + Chr1:24086200-24086219 None:intergenic 25.0%
!!! GACTAACTACTTTTCTTAAT+GGG + Chr1:24086200-24086219 None:intergenic 25.0%
!!! GATTATTTTGGTTTTCTTGT+AGG - Chr1:24085316-24085335 MsG0180001612.01.T01:intron 25.0%
!!! GTTCAGGATAGATTATTTTT+TGG - Chr1:24087361-24087380 MsG0180001612.01.T01:intron 25.0%
!!! TAAATTTGTTTTTGAGAGGA+AGG + Chr1:24081368-24081387 None:intergenic 25.0%
!!! TTTCGAGAACTTTTGATTAA+AGG + Chr1:24080295-24080314 None:intergenic 25.0%
!!! TTTGTTTTCGATTTCAAGTT+GGG - Chr1:24088486-24088505 MsG0180001612.01.T01:intron 25.0%
!!! TTTTGTTTTCGATTTCAAGT+TGG - Chr1:24088485-24088504 MsG0180001612.01.T01:intron 25.0%
!!! TTTTTATTCTGGTTCAAATC+TGG + Chr1:24078862-24078881 None:intergenic 25.0%
AAAAACAAATCTATCCGTAG+GGG - Chr1:24089210-24089229 MsG0180001612.01.T01:intron 30.0%
AAAAATCCACTAGCTATAGA+AGG - Chr1:24079822-24079841 MsG0180001612.01.T01:intron 30.0%
AAAGGGGACAAAATTGATTA+TGG + Chr1:24082141-24082160 None:intergenic 30.0%
AACGCTCAACCATAAAAATA+TGG + Chr1:24087413-24087432 None:intergenic 30.0%
AACTAACCAAATCACAATCT+TGG - Chr1:24084976-24084995 MsG0180001612.01.T01:intron 30.0%
AAGAAGCTCTTAAAATTTGC+AGG - Chr1:24082959-24082978 MsG0180001612.01.T01:CDS 30.0%
AATAAGGAAAACTCAATCAC+TGG + Chr1:24084266-24084285 None:intergenic 30.0%
AATAGAGTATAGCTGAACAA+TGG + Chr1:24083475-24083494 None:intergenic 30.0%
AATGAGAATAATACCGATCA+TGG + Chr1:24089487-24089506 None:intergenic 30.0%
AATGATGAAACTGGAACTAA+AGG + Chr1:24085177-24085196 None:intergenic 30.0%
AATTGCTTTCTAAGTTCTTC+TGG - Chr1:24088416-24088435 MsG0180001612.01.T01:intron 30.0%
AATTGGTGAAATCCTTTAGT+GGG + Chr1:24079209-24079228 None:intergenic 30.0%
ACAAATTAAGGATTGGATTG+GGG + Chr1:24079637-24079656 None:intergenic 30.0%
ACTAACCAAATCACAATCTT+GGG - Chr1:24084977-24084996 MsG0180001612.01.T01:intron 30.0%
ACTTCACAAGTTACAACATT+AGG - Chr1:24080158-24080177 MsG0180001612.01.T01:intron 30.0%
AGAAGCTCTTAAAATTTGCA+GGG - Chr1:24082960-24082979 MsG0180001612.01.T01:CDS 30.0%
AGAGAAATATCTCATATCTG+AGG + Chr1:24084070-24084089 None:intergenic 30.0%
AGATATAATAACACCAACAC+AGG + Chr1:24085013-24085032 None:intergenic 30.0%
AGTGCTCAATATGATAGATT+AGG - Chr1:24086016-24086035 MsG0180001612.01.T01:intron 30.0%
AGTTATATATAGTACTCCCT+CGG - Chr1:24086139-24086158 MsG0180001612.01.T01:intron 30.0%
ATAAGGAAAACTCAATCACT+GGG + Chr1:24084265-24084284 None:intergenic 30.0%
ATAATTGGATTCAGAGCAAT+AGG + Chr1:24082785-24082804 None:intergenic 30.0%
ATGGGAGTTATATAAAGGAT+AGG + Chr1:24084152-24084171 None:intergenic 30.0%
ATTGCTTTCTAAGTTCTTCT+GGG - Chr1:24088417-24088436 MsG0180001612.01.T01:intron 30.0%
ATTTGATCAAACACTTTGTG+TGG + Chr1:24082718-24082737 None:intergenic 30.0%
CAAAAGAAAAAGAGATTGGA+TGG - Chr1:24079987-24080006 MsG0180001612.01.T01:intron 30.0%
CAAACATTTGTACAGAAAAC+AGG + Chr1:24083795-24083814 None:intergenic 30.0%
CAAGTATTCATATATGGCTT+TGG - Chr1:24079732-24079751 MsG0180001612.01.T01:intron 30.0%
CACTTTCTCATATTCTTGTA+CGG + Chr1:24080622-24080641 None:intergenic 30.0%
CAGAAGAAAGAAAACAATCA+TGG - Chr1:24083060-24083079 MsG0180001612.01.T01:CDS 30.0%
CTAGTTAGTTAGAGAAGAAT+GGG + Chr1:24084170-24084189 None:intergenic 30.0%
CTTCACAAGTTACAACATTA+GGG - Chr1:24080159-24080178 MsG0180001612.01.T01:intron 30.0%
GAAAATCACAGCAAAATGAA+AGG - Chr1:24079795-24079814 MsG0180001612.01.T01:intron 30.0%
GAACAAATTAAGGATTGGAT+TGG + Chr1:24079639-24079658 None:intergenic 30.0%
GAAGAATGGGAGTTATATAA+AGG + Chr1:24084157-24084176 None:intergenic 30.0%
GCAACAACTAATATTCATTC+AGG - Chr1:24085987-24086006 MsG0180001612.01.T01:intron 30.0%
GCCATATATGAATACTTGAA+AGG + Chr1:24079730-24079749 None:intergenic 30.0%
GTATAGTAGAAAGAGTTGAA+AGG + Chr1:24087136-24087155 None:intergenic 30.0%
GTGATAACAATAACTAGTGT+TGG + Chr1:24088363-24088382 None:intergenic 30.0%
GTGCTCAATATGATAGATTA+GGG - Chr1:24086017-24086036 MsG0180001612.01.T01:intron 30.0%
GTTGAGAATGACAAATTAGA+AGG + Chr1:24080113-24080132 None:intergenic 30.0%
GTTGCTAAAAAATTCATCTG+AGG - Chr1:24085134-24085153 MsG0180001612.01.T01:intron 30.0%
TAAAAGAGTGAGTGTATGTT+TGG + Chr1:24082174-24082193 None:intergenic 30.0%
TAGTTATTGGGTATAACACT+TGG + Chr1:24079412-24079431 None:intergenic 30.0%
TATCTACAGGTATAAGCTAA+AGG - Chr1:24085956-24085975 MsG0180001612.01.T01:intron 30.0%
TATTGAAAACGGTGATCAAA+AGG + Chr1:24083354-24083373 None:intergenic 30.0%
TCAAAATTGCACCTTAAACA+CGG - Chr1:24082829-24082848 MsG0180001612.01.T01:intron 30.0%
TCAAGTTTGTAAGGGTTTAT+GGG - Chr1:24083257-24083276 MsG0180001612.01.T01:intron 30.0%
TCAATATGATAGATTAGGGT+GGG - Chr1:24086021-24086040 MsG0180001612.01.T01:intron 30.0%
TCATAAAAACAATATCCCTC+CGG + Chr1:24082924-24082943 None:intergenic 30.0%
TCATCAGTAAAGAGAAAACA+AGG + Chr1:24088787-24088806 None:intergenic 30.0%
TCTCAATTTATGTTCTGTTC+AGG - Chr1:24087345-24087364 MsG0180001612.01.T01:intron 30.0%
TGGGAGTTATATAAAGGATA+GGG + Chr1:24084151-24084170 None:intergenic 30.0%
TTAATAGAGAAACCACTAGA+AGG + Chr1:24084526-24084545 None:intergenic 30.0%
TTAGTTCCAGTTTCATCATT+CGG - Chr1:24085177-24085196 MsG0180001612.01.T01:intron 30.0%
TTATTCAGATACAAGCCTTA+TGG + Chr1:24084104-24084123 None:intergenic 30.0%
TTCGAAGGTTCTTAGTTATT+GGG + Chr1:24079424-24079443 None:intergenic 30.0%
TTGAAATTGTCATGATTCTC+AGG + Chr1:24079864-24079883 None:intergenic 30.0%
TTGAATTAGAGACAGTATTG+AGG + Chr1:24087805-24087824 None:intergenic 30.0%
TTTCTCTATTAAGCACTTTG+TGG - Chr1:24084534-24084553 MsG0180001612.01.T01:intron 30.0%
TTTGATCAAACACTTTGTGT+GGG + Chr1:24082717-24082736 None:intergenic 30.0%
! AAATAGGGTTACTTTAGTTG+TGG + Chr1:24081834-24081853 None:intergenic 30.0%
! ACAATCAATGGTAATGATAG+TGG - Chr1:24079257-24079276 MsG0180001612.01.T01:CDS 30.0%
! ACTGATTAGTTCACAAGTTT+GGG - Chr1:24083597-24083616 MsG0180001612.01.T01:intron 30.0%
! AGGAATTCTTGGATTTTTCA+AGG - Chr1:24084693-24084712 MsG0180001612.01.T01:intron 30.0%
! ATTTTCCAAATTATCCCTCA+TGG - Chr1:24086259-24086278 MsG0180001612.01.T01:intron 30.0%
! ATTTTGTTGGAGACCAAAAT+GGG + Chr1:24081789-24081808 None:intergenic 30.0%
! CATTCCATTATCAGTTTTTC+AGG + Chr1:24085425-24085444 None:intergenic 30.0%
! CTCTGGAAACTCAAAATTTA+TGG - Chr1:24088172-24088191 MsG0180001612.01.T01:intron 30.0%
! CTTTAAGAAGCTAACTAAGA+AGG - Chr1:24088990-24089009 MsG0180001612.01.T01:intron 30.0%
! TAATCAGTGTTGAAAACCAT+GGG + Chr1:24083585-24083604 None:intergenic 30.0%
! TCCAGTATACTTGTTAAAGT+GGG - Chr1:24087560-24087579 MsG0180001612.01.T01:intron 30.0%
! TGTTTATATTTGAGACTGGA+GGG - Chr1:24086886-24086905 MsG0180001612.01.T01:intron 30.0%
! TTCAAGTTTGTAAGGGTTTA+TGG - Chr1:24083256-24083275 MsG0180001612.01.T01:intron 30.0%
! TTGTTTATATTTGAGACTGG+AGG - Chr1:24086885-24086904 MsG0180001612.01.T01:intron 30.0%
! TTTTCCAAATTATCCCTCAT+GGG - Chr1:24086260-24086279 MsG0180001612.01.T01:intron 30.0%
!! AAGATTGTGATTTGGTTAGT+TGG + Chr1:24084977-24084996 None:intergenic 30.0%
!! AATAGAGTTTTGTGATGGTT+TGG + Chr1:24080955-24080974 None:intergenic 30.0%
!! ACTTTGAGAAAACGTTTTCT+AGG + Chr1:24083895-24083914 None:intergenic 30.0%
!! ACTTTGCTATGTTCTTTTAG+AGG + Chr1:24081000-24081019 None:intergenic 30.0%
!! ATCTTCCATTTTTGACAACA+AGG - Chr1:24080193-24080212 MsG0180001612.01.T01:intron 30.0%
!! CTACTATACTCCTTTGAAAT+AGG - Chr1:24087147-24087166 MsG0180001612.01.T01:intron 30.0%
!! GACTAACTACTTTTCTTAGT+AGG + Chr1:24086633-24086652 None:intergenic 30.0%
!! GATCAACAGGTTTTATAAGA+GGG + Chr1:24080239-24080258 None:intergenic 30.0%
!! GGTGAATAATTTGTTAAGAC+TGG + Chr1:24083743-24083762 None:intergenic 30.0%
!! TATGGCTTTGGTTTCAAATA+TGG - Chr1:24079744-24079763 MsG0180001612.01.T01:intron 30.0%
!! TGATCAACAGGTTTTATAAG+AGG + Chr1:24080240-24080259 None:intergenic 30.0%
!! TTAGTGTATGTTTGCTTTTG+CGG - Chr1:24081852-24081871 MsG0180001612.01.T01:intron 30.0%
!! TTTTCTCTTTACTGATGATG+CGG - Chr1:24088789-24088808 MsG0180001612.01.T01:intron 30.0%
!!! ACCGTTTTTTTTGGTATTGT+AGG - Chr1:24083282-24083301 MsG0180001612.01.T01:intron 30.0%
!!! ATGCTCTTGATGGATTATTT+TGG - Chr1:24085304-24085323 MsG0180001612.01.T01:intron 30.0%
!!! ATGTTTGGCTCTACTTTTAA+AGG + Chr1:24082159-24082178 None:intergenic 30.0%
!!! CAGATGAATTTTTTAGCAAC+TGG + Chr1:24085134-24085153 None:intergenic 30.0%
!!! CAGTAACACTTTTTTTCTCA+TGG + Chr1:24086295-24086314 None:intergenic 30.0%
!!! GATGGCTAGATTTGTTTTTT+CGG + Chr1:24089113-24089132 None:intergenic 30.0%
!!! TGTTTGGCTCTACTTTTAAA+GGG + Chr1:24082158-24082177 None:intergenic 30.0%
!!! TGTTTTTTCGCTTTTCTCAA+AGG - Chr1:24085633-24085652 MsG0180001612.01.T01:intron 30.0%
AAACAAAAAGGAAAAGGGCT+AGG + Chr1:24088473-24088492 None:intergenic 35.0%
AACAAAAGCTGTTAGGTACT+GGG + Chr1:24084242-24084261 None:intergenic 35.0%
AACAATTTCCGCAGATGATT+TGG - Chr1:24088101-24088120 MsG0180001612.01.T01:intron 35.0%
AACAGTAGACAAATGATGTC+TGG - Chr1:24079373-24079392 MsG0180001612.01.T01:intron 35.0%
AACCAACTCTCCTATTTAAC+AGG - Chr1:24084196-24084215 MsG0180001612.01.T01:intron 35.0%
AACCTGTTAAATAGGAGAGT+TGG + Chr1:24084201-24084220 None:intergenic 35.0%
AAGAAGAGGCAAAAATTGCT+AGG - Chr1:24088953-24088972 MsG0180001612.01.T01:intron 35.0%
AAGAAGCTAACTAAGAAGGA+GGG - Chr1:24088994-24089013 MsG0180001612.01.T01:intron 35.0%
AAGAATTTCACTCCTTCTAG+TGG - Chr1:24084511-24084530 MsG0180001612.01.T01:intron 35.0%
AAGCCATCGATAAAGACTAT+GGG - Chr1:24080467-24080486 MsG0180001612.01.T01:intron 35.0%
AATAATGAAGTTGGGATCGA+AGG - Chr1:24082498-24082517 MsG0180001612.01.T01:intron 35.0%
AATAGAGGGAATAATGTGAG+TGG + Chr1:24087956-24087975 None:intergenic 35.0%
AATCACAGCTAGAACAAACA+TGG + Chr1:24083689-24083708 None:intergenic 35.0%
AATGGGCATTAATGAAAACC+TGG - Chr1:24085479-24085498 MsG0180001612.01.T01:intron 35.0%
ACATGTGTACCGTTAAAAAG+TGG - Chr1:24082246-24082265 MsG0180001612.01.T01:intron 35.0%
ACTAGACATGCTGTTATTGT+AGG - Chr1:24084807-24084826 MsG0180001612.01.T01:intron 35.0%
ACTTTACCTTCTATAGCTAG+TGG + Chr1:24079831-24079850 None:intergenic 35.0%
AGAGCAATCAAGATCTACAA+GGG + Chr1:24088156-24088175 None:intergenic 35.0%
AGATCAGTAAGAGAACCAAT+AGG + Chr1:24079499-24079518 None:intergenic 35.0%
AGTACGCAATTATGATCAAC+AGG + Chr1:24080252-24080271 None:intergenic 35.0%
AGTCACTATTTGACAACACT+GGG + Chr1:24083425-24083444 None:intergenic 35.0%
AGTGTTCACTAAATTGCTTG+AGG + Chr1:24084394-24084413 None:intergenic 35.0%
ATATCTGATATGTGGACCAA+TGG + Chr1:24079016-24079035 None:intergenic 35.0%
ATCATGAAGTCCAAGAAAAC+AGG + Chr1:24084905-24084924 None:intergenic 35.0%
ATTGTTCGTCGCATTCATAA+GGG - Chr1:24083109-24083128 MsG0180001612.01.T01:intron 35.0%
ATTTCAATTGTTCCCTTGTG+TGG - Chr1:24079563-24079582 MsG0180001612.01.T01:intron 35.0%
CAAAGAACAAACCGTGTTTA+AGG + Chr1:24082843-24082862 None:intergenic 35.0%
CAAGTTTGTAAGGGTTTATG+GGG - Chr1:24083258-24083277 MsG0180001612.01.T01:intron 35.0%
CACAGTTTCTCAAAGTAAAC+AGG + Chr1:24083771-24083790 None:intergenic 35.0%
CACCATCATCATTGTTGTAT+TGG - Chr1:24083398-24083417 MsG0180001612.01.T01:intron 35.0%
CAGAATTTCAATGATCTGCT+TGG - Chr1:24086947-24086966 MsG0180001612.01.T01:intron 35.0%
CAGTCCTGAAAAACTGATAA+TGG - Chr1:24085418-24085437 MsG0180001612.01.T01:intron 35.0%
CATCAGCTAGAAACAATCAA+TGG - Chr1:24079245-24079264 MsG0180001612.01.T01:CDS 35.0%
CATTCATCTCATACCTTTCT+CGG + Chr1:24079083-24079102 None:intergenic 35.0%
CGCACTTTCACTTAATCTAT+AGG + Chr1:24083939-24083958 None:intergenic 35.0%
CTAAGATAGATGAGGATAGT+TGG + Chr1:24079531-24079550 None:intergenic 35.0%
CTCAATATGATAGATTAGGG+TGG - Chr1:24086020-24086039 MsG0180001612.01.T01:intron 35.0%
CTCACAATTCTGATACCTAT+TGG - Chr1:24079481-24079500 MsG0180001612.01.T01:intron 35.0%
CTTTGTGAAGAGATATATGG+TGG + Chr1:24078775-24078794 None:intergenic 35.0%
GAATGGGATACAATCATGAA+AGG + Chr1:24087280-24087299 None:intergenic 35.0%
GAATTGGTGAAATCCTTTAG+TGG + Chr1:24079210-24079229 None:intergenic 35.0%
GACCAATACAACAATGATGA+TGG + Chr1:24083403-24083422 None:intergenic 35.0%
GAGCATCTTGAAGTCAAAAA+TGG - Chr1:24086908-24086927 MsG0180001612.01.T01:intron 35.0%
GCAATGGAGAACTCAATAAT+TGG + Chr1:24082800-24082819 None:intergenic 35.0%
GCTAGTTAGTTAGAGAAGAA+TGG + Chr1:24084171-24084190 None:intergenic 35.0%
GGCTTCAAAAACTGTATATC+AGG - Chr1:24088335-24088354 MsG0180001612.01.T01:intron 35.0%
GTTCGAAGGTTCTTAGTTAT+TGG + Chr1:24079425-24079444 None:intergenic 35.0%
GTTGAGAAATATGCAGACTA+AGG - Chr1:24089368-24089387 MsG0180001612.01.T01:CDS 35.0%
GTTGTGATAAAAGTCAACAG+AGG + Chr1:24085663-24085682 None:intergenic 35.0%
TAACTAAGAACCTTCGAACT+TGG - Chr1:24079426-24079445 MsG0180001612.01.T01:intron 35.0%
TAAGAAGCTAACTAAGAAGG+AGG - Chr1:24088993-24089012 MsG0180001612.01.T01:intron 35.0%
TACACTTGATCTTAGCCAAA+AGG - Chr1:24079057-24079076 MsG0180001612.01.T01:CDS 35.0%
TAGTCACTATTTGACAACAC+TGG + Chr1:24083426-24083445 None:intergenic 35.0%
TATGAATGCGACGAACAATA+GGG + Chr1:24083108-24083127 None:intergenic 35.0%
TATTGAGGGACTTTCTTTGA+GGG + Chr1:24080922-24080941 None:intergenic 35.0%
TATTGTTCGTCGCATTCATA+AGG - Chr1:24083108-24083127 MsG0180001612.01.T01:intron 35.0%
TCCCACTTTAACAAGTATAC+TGG + Chr1:24087564-24087583 None:intergenic 35.0%
TCCTATTTAACAGGTTCGTT+GGG - Chr1:24084205-24084224 MsG0180001612.01.T01:intron 35.0%
TGCGTTTGGATGAGTAAATT+CGG - Chr1:24082861-24082880 MsG0180001612.01.T01:intron 35.0%
TGGTGGAATTGTACAACTTA+CGG + Chr1:24087109-24087128 None:intergenic 35.0%
TGTATTTCAGAGTCCAAAGA+AGG - Chr1:24088236-24088255 MsG0180001612.01.T01:intron 35.0%
TTATCTCTTCATGCTCTTGA+TGG - Chr1:24085294-24085313 MsG0180001612.01.T01:intron 35.0%
TTATGAATGCGACGAACAAT+AGG + Chr1:24083109-24083128 None:intergenic 35.0%
TTATTGAGGGACTTTCTTTG+AGG + Chr1:24080923-24080942 None:intergenic 35.0%
TTCAGTAACTTTCATTAGGC+CGG - Chr1:24079656-24079675 MsG0180001612.01.T01:intron 35.0%
TTCATGATTGTATCCCATTC+AGG - Chr1:24087280-24087299 MsG0180001612.01.T01:intron 35.0%
TTCTTTATAAGTGTGGCCTA+AGG - Chr1:24084433-24084452 MsG0180001612.01.T01:intron 35.0%
TTGCTTTCTAAGTTCTTCTG+GGG - Chr1:24088418-24088437 MsG0180001612.01.T01:intron 35.0%
TTGTAAGTATTCGCTTCCTT+AGG + Chr1:24084452-24084471 None:intergenic 35.0%
TTGTGAGAAGAGAAATCACT+CGG + Chr1:24079468-24079487 None:intergenic 35.0%
TTGTTGATCTTTCATGTCAC+AGG - Chr1:24084485-24084504 MsG0180001612.01.T01:intron 35.0%
TTTAATATCGTGTGGACCAT+TGG - Chr1:24078997-24079016 MsG0180001612.01.T01:CDS 35.0%
TTTAGATGCCAAATCATCTG+CGG + Chr1:24088112-24088131 None:intergenic 35.0%
TTTCCAAATTATCCCTCATG+GGG - Chr1:24086261-24086280 MsG0180001612.01.T01:intron 35.0%
TTTGGGAACATTAAGGTTGT+TGG - Chr1:24084740-24084759 MsG0180001612.01.T01:intron 35.0%
! AAATAGGAGAGTTGGTTATG+TGG + Chr1:24084193-24084212 None:intergenic 35.0%
! AATTTTTGCCTCTTCTTCAG+GGG + Chr1:24088950-24088969 None:intergenic 35.0%
! AGAAAGAGTTGAAAGGGTAT+TGG + Chr1:24087129-24087148 None:intergenic 35.0%
! AGATACAAGCCTTATGGTTT+AGG + Chr1:24084098-24084117 None:intergenic 35.0%
! AGCACTTTGTGGTTTGTATT+AGG - Chr1:24084545-24084564 MsG0180001612.01.T01:intron 35.0%
! ATACTTGAAAGGATTGGTAG+AGG + Chr1:24079719-24079738 None:intergenic 35.0%
! ATCAAGAGCATGAAGAGATA+AGG + Chr1:24085295-24085314 None:intergenic 35.0%
! ATCTGCCTTGTTGTCAAAAA+TGG + Chr1:24080201-24080220 None:intergenic 35.0%
! CAATTTTTGCCTCTTCTTCA+GGG + Chr1:24088951-24088970 None:intergenic 35.0%
! CACTGATTAGTTCACAAGTT+TGG - Chr1:24083596-24083615 MsG0180001612.01.T01:intron 35.0%
! CATTTTGTTGGAGACCAAAA+TGG + Chr1:24081790-24081809 None:intergenic 35.0%
! CTAATCAGTGTTGAAAACCA+TGG + Chr1:24083586-24083605 None:intergenic 35.0%
! CTCCAGTATACTTGTTAAAG+TGG - Chr1:24087559-24087578 MsG0180001612.01.T01:intron 35.0%
! GCAAGTTCTAATGGAAGAAT+TGG + Chr1:24079226-24079245 None:intergenic 35.0%
! GCACTTTGTGGTTTGTATTA+GGG - Chr1:24084546-24084565 MsG0180001612.01.T01:intron 35.0%
! GTAAAAGTGAGTACCCATTT+TGG - Chr1:24081773-24081792 MsG0180001612.01.T01:intron 35.0%
! GTTTTTATGAATCATGGGGT+GGG - Chr1:24082934-24082953 MsG0180001612.01.T01:intron 35.0%
! TAAGTGAAAGTGCGTTTGAT+AGG - Chr1:24083945-24083964 MsG0180001612.01.T01:intron 35.0%
! TAGCTAGTCTCCTATTTCAA+AGG + Chr1:24087160-24087179 None:intergenic 35.0%
! TGATCACCGTTTTCAATATC+AGG - Chr1:24083356-24083375 MsG0180001612.01.T01:intron 35.0%
! TGCTTTTATATGAGATCCGA+GGG + Chr1:24086158-24086177 None:intergenic 35.0%
! TTTATTGATGGTTGGTGCAA+TGG + Chr1:24080347-24080366 None:intergenic 35.0%
! TTTCTTTGAGGGGATATTGA+GGG + Chr1:24080911-24080930 None:intergenic 35.0%
! TTTGGAACTAGAACTAGTCT+CGG + Chr1:24089401-24089420 None:intergenic 35.0%
!! AAGTTGATGAGCTCACTATA+TGG - Chr1:24079944-24079963 MsG0180001612.01.T01:CDS 35.0%
!! ATTTTGAGTGTGTGATGCAA+TGG + Chr1:24082816-24082835 None:intergenic 35.0%
!! TGGCTTTGTGAAGAGATATA+TGG + Chr1:24078778-24078797 None:intergenic 35.0%
!! TGTTTTTATGAATCATGGGG+TGG - Chr1:24082933-24082952 MsG0180001612.01.T01:intron 35.0%
!! TTGCTTTTATATGAGATCCG+AGG + Chr1:24086159-24086178 None:intergenic 35.0%
!!! GACGGCTAGATTTGTTTTTT+CGG + Chr1:24089236-24089255 None:intergenic 35.0%
!!! GTTTGGCTCTACTTTTAAAG+GGG + Chr1:24082157-24082176 None:intergenic 35.0%
!!! TTATGGGGAACCGTTTTTTT+TGG - Chr1:24083273-24083292 MsG0180001612.01.T01:intron 35.0%
!!! TTATTTTTTCGTCCCCAAAC+AGG + Chr1:24089054-24089073 None:intergenic 35.0%
AAATTGCTTGAGGAAACCCT+AGG + Chr1:24084384-24084403 None:intergenic 40.0%
AACGAGAGTGATAAAGTGCA+AGG + Chr1:24083165-24083184 None:intergenic 40.0%
AAGAACCTTCGAACTTGGAA+AGG - Chr1:24079431-24079450 MsG0180001612.01.T01:intron 40.0%
AAGAAGAGAGTTTCCATCCA+TGG - Chr1:24088859-24088878 MsG0180001612.01.T01:intron 40.0%
AAGGTTTGTAGCCGAATGAT+TGG + Chr1:24083146-24083165 None:intergenic 40.0%
AATAAATGAGGCTAGGCAAG+AGG + Chr1:24086990-24087009 None:intergenic 40.0%
AATGCGTTGCACTATAGCAT+TGG + Chr1:24078915-24078934 None:intergenic 40.0%
AATGCTATAGTGCAACGCAT+TGG - Chr1:24078914-24078933 MsG0180001612.01.T01:three_prime_UTR 40.0%
AATGCTGATCGCCTAATTGT+TGG - Chr1:24088714-24088733 MsG0180001612.01.T01:intron 40.0%
ACAAGCAGTTACACCTGAAT+GGG + Chr1:24087296-24087315 None:intergenic 40.0%
ACAGTCTGTGCATAACAAAC+CGG + Chr1:24087062-24087081 None:intergenic 40.0%
AGAAAACAATCATGGTGCAG+TGG - Chr1:24083068-24083087 MsG0180001612.01.T01:CDS 40.0%
AGATGAATCTTACACTGCGT+TGG + Chr1:24082644-24082663 None:intergenic 40.0%
ATACGCACAATGATGGTATC+AGG + Chr1:24087828-24087847 None:intergenic 40.0%
ATGGAATAAGTTCCCCATGA+GGG + Chr1:24086276-24086295 None:intergenic 40.0%
ATGTGCAGCTCTATTGAATG+TGG + Chr1:24078728-24078747 None:intergenic 40.0%
ATTGAGGGACTTTCTTTGAG+GGG + Chr1:24080921-24080940 None:intergenic 40.0%
ATTGTGAAGAGAAAGCGAGA+GGG + Chr1:24087925-24087944 None:intergenic 40.0%
CAAAATATCCCTGTATGGCA+CGG + Chr1:24078803-24078822 None:intergenic 40.0%
CAAACGCTTCTCACAATCAT+GGG - Chr1:24088688-24088707 MsG0180001612.01.T01:intron 40.0%
CAAGCCATCGATAAAGACTA+TGG - Chr1:24080466-24080485 MsG0180001612.01.T01:intron 40.0%
CAATAGAGCTGCACATGATT+TGG - Chr1:24078732-24078751 MsG0180001612.01.T01:three_prime_UTR 40.0%
CAATGGTAGAAGACTTAAGG+AGG + Chr1:24080330-24080349 None:intergenic 40.0%
CAGAGCAATCAAGATCTACA+AGG + Chr1:24088157-24088176 None:intergenic 40.0%
CTACAGTATGATTCATCACC+CGG - Chr1:24087727-24087746 MsG0180001612.01.T01:intron 40.0%
CTCCTATTTAACAGGTTCGT+TGG - Chr1:24084204-24084223 MsG0180001612.01.T01:intron 40.0%
CTTGTAGATCTTGATTGCTC+TGG - Chr1:24088155-24088174 MsG0180001612.01.T01:intron 40.0%
GAACAAAAGCTGTTAGGTAC+TGG + Chr1:24084243-24084262 None:intergenic 40.0%
GAACTACCGAATGATGAAAC+TGG + Chr1:24085186-24085205 None:intergenic 40.0%
GAACTTCAAGATGCTTAAGC+CGG + Chr1:24079678-24079697 None:intergenic 40.0%
GATACCATCATTGTGCGTAT+GGG - Chr1:24087828-24087847 MsG0180001612.01.T01:intron 40.0%
GGTCTCCAACAAAATGTGTA+GGG - Chr1:24081794-24081813 MsG0180001612.01.T01:intron 40.0%
GTATTGTAGGTCAGTTACAG+AGG - Chr1:24083295-24083314 MsG0180001612.01.T01:intron 40.0%
GTCTCCAACAAAATGTGTAG+GGG - Chr1:24081795-24081814 MsG0180001612.01.T01:intron 40.0%
GTGCAATGGTAGAAGACTTA+AGG + Chr1:24080333-24080352 None:intergenic 40.0%
TACAAGCAGTTACACCTGAA+TGG + Chr1:24087297-24087316 None:intergenic 40.0%
TACAGTATGATTCATCACCC+GGG - Chr1:24087728-24087747 MsG0180001612.01.T01:intron 40.0%
TATAACACTTGGCCGAACAT+CGG + Chr1:24079401-24079420 None:intergenic 40.0%
TATGAGATGAATGACGAGCT+CGG - Chr1:24079090-24079109 MsG0180001612.01.T01:CDS 40.0%
TATTGAGACCACTCCTGTTT+GGG - Chr1:24089038-24089057 MsG0180001612.01.T01:intron 40.0%
TCAAAAGGCCTTGAGATACT+TGG + Chr1:24083339-24083358 None:intergenic 40.0%
TCAACTTCGGTTGAATGTCT+TGG - Chr1:24080381-24080400 MsG0180001612.01.T01:intron 40.0%
TCATCATTCGGTAGTTCACA+AGG - Chr1:24085189-24085208 MsG0180001612.01.T01:intron 40.0%
TCTCGTTCTTCTCTTTCACA+AGG - Chr1:24083178-24083197 MsG0180001612.01.T01:intron 40.0%
TGATACCATCATTGTGCGTA+TGG - Chr1:24087827-24087846 MsG0180001612.01.T01:intron 40.0%
TGATTGTGCATTTGTGCCTA+GGG - Chr1:24084365-24084384 MsG0180001612.01.T01:intron 40.0%
TGGAATTGTACAACTTACGG+AGG + Chr1:24087106-24087125 None:intergenic 40.0%
TGGCAGGAATGCTAATGAAA+TGG - Chr1:24078821-24078840 MsG0180001612.01.T01:three_prime_UTR 40.0%
TGGTCTCCAACAAAATGTGT+AGG - Chr1:24081793-24081812 MsG0180001612.01.T01:intron 40.0%
TGTGACCCAAGATTGTGATT+TGG + Chr1:24084985-24085004 None:intergenic 40.0%
TTAACCTCTGTAACAAGTCC+CGG + Chr1:24087749-24087768 None:intergenic 40.0%
TTACAGAGGCAATGGTCAAA+AGG - Chr1:24083309-24083328 MsG0180001612.01.T01:intron 40.0%
TTATTGAGACCACTCCTGTT+TGG - Chr1:24089037-24089056 MsG0180001612.01.T01:intron 40.0%
TTCCTGGCATAGGGTTTAAA+AGG - Chr1:24084583-24084602 MsG0180001612.01.T01:intron 40.0%
TTGAAAACTTCGCACACAAG+TGG - Chr1:24081673-24081692 MsG0180001612.01.T01:intron 40.0%
TTGATTGTGCATTTGTGCCT+AGG - Chr1:24084364-24084383 MsG0180001612.01.T01:intron 40.0%
TTGCTTCTGACAAAAGTGAG+AGG + Chr1:24086108-24086127 None:intergenic 40.0%
TTGTCAGAAGCAACATGATG+AGG - Chr1:24086115-24086134 MsG0180001612.01.T01:intron 40.0%
! AACCTTTTAAACCCTATGCC+AGG + Chr1:24084588-24084607 None:intergenic 40.0%
! AATTAAGGATTGGATTGGGG+TGG + Chr1:24079634-24079653 None:intergenic 40.0%
! ACAACTGTTAGCCTACATTC+TGG + Chr1:24088913-24088932 None:intergenic 40.0%
! ACTGTGTCAACCTGTTTTCT+TGG - Chr1:24084892-24084911 MsG0180001612.01.T01:CDS 40.0%
! AGTTCACAAGTTTGGGACAT+TGG - Chr1:24083604-24083623 MsG0180001612.01.T01:intron 40.0%
! CTAGCTGATGCAAGTTCTAA+TGG + Chr1:24079235-24079254 None:intergenic 40.0%
! CTTACAGCTGAAGCATTTGT+GGG - Chr1:24088823-24088842 MsG0180001612.01.T01:intron 40.0%
! CTTGTGTGCGAAGTTTTCAA+TGG + Chr1:24081673-24081692 None:intergenic 40.0%
! CTTTCTTTGAGGGGATATTG+AGG + Chr1:24080912-24080931 None:intergenic 40.0%
! GCAATTTTTGCCTCTTCTTC+AGG + Chr1:24088952-24088971 None:intergenic 40.0%
! GGTTTTCTTGTAGGCATGAT+TGG - Chr1:24085325-24085344 MsG0180001612.01.T01:intron 40.0%
! TATTTAATGGCACCGGGTTA+TGG + Chr1:24087686-24087705 None:intergenic 40.0%
! TCGAGAGTCTAAGATAGATG+AGG + Chr1:24079539-24079558 None:intergenic 40.0%
! TCTTACAGCTGAAGCATTTG+TGG - Chr1:24088822-24088841 MsG0180001612.01.T01:intron 40.0%
! TTGACCCCTACACATTTTGT+TGG + Chr1:24081802-24081821 None:intergenic 40.0%
! TTGGGACTGTGTTAGTTTGA+AGG - Chr1:24088504-24088523 MsG0180001612.01.T01:intron 40.0%
! TTTTAAACCCTATGCCAGGA+AGG + Chr1:24084584-24084603 None:intergenic 40.0%
!! AAGAGTTGAAAGGGTATTGG+TGG + Chr1:24087126-24087145 None:intergenic 40.0%
!! AGTTGCAAGTGTTGGTAAAG+CGG - Chr1:24088313-24088332 MsG0180001612.01.T01:intron 40.0%
!! GGACATTGGTTTAGTTGGAA+GGG - Chr1:24083618-24083637 MsG0180001612.01.T01:intron 40.0%
!! GTTTGGGACATTGGTTTAGT+TGG - Chr1:24083613-24083632 MsG0180001612.01.T01:intron 40.0%
!! TGCACATGATTTGGTCTTGT+GGG - Chr1:24078741-24078760 MsG0180001612.01.T01:three_prime_UTR 40.0%
!!! ATTACTTTTTTGAGGGGGAG+AGG + Chr1:24078978-24078997 None:intergenic 40.0%
!!! ATTTGTTTTTTCGGCCCCTA+CGG + Chr1:24089227-24089246 None:intergenic 40.0%
!!! CGGTGCTATCCACTTTTTAA+CGG + Chr1:24082258-24082277 None:intergenic 40.0%
!!! TTACTTTTTTGAGGGGGAGA+GGG + Chr1:24078977-24078996 None:intergenic 40.0%
!!! TTTTTTGTCCCAAACACGAG+TGG + Chr1:24089142-24089161 None:intergenic 40.0%
AAAAGGAAAAGGGCTAGGAG+TGG + Chr1:24088468-24088487 None:intergenic 45.0%
AAACACTTTGTGTGGGTGTG+TGG + Chr1:24082710-24082729 None:intergenic 45.0%
AAACGAGACCACACCTGTTA+AGG - Chr1:24089182-24089201 MsG0180001612.01.T01:intron 45.0%
AAAGGGCTAGGAGTGGAAAA+AGG + Chr1:24088461-24088480 None:intergenic 45.0%
AAATCACACTAGCGTGCAGA+CGG - Chr1:24085597-24085616 MsG0180001612.01.T01:intron 45.0%
AACCTTCGAACTTGGAAAGG+AGG - Chr1:24079434-24079453 MsG0180001612.01.T01:intron 45.0%
AACGAAGCTTGGAGAAAAGC+AGG + Chr1:24088019-24088038 None:intergenic 45.0%
AACGAGACCACACCTGTTAA+GGG - Chr1:24089183-24089202 MsG0180001612.01.T01:intron 45.0%
AAGGTGTGCCAAGTATCTCA+AGG - Chr1:24083328-24083347 MsG0180001612.01.T01:intron 45.0%
ACCTTCGAACTTGGAAAGGA+GGG - Chr1:24079435-24079454 MsG0180001612.01.T01:intron 45.0%
AGAGATTACCCCTGAAGAAG+AGG - Chr1:24088939-24088958 MsG0180001612.01.T01:intron 45.0%
AGAGTTTCCATCCATGGCAA+AGG - Chr1:24088865-24088884 MsG0180001612.01.T01:intron 45.0%
AGATCCACCACAAAACAGCA+AGG + Chr1:24084657-24084676 None:intergenic 45.0%
AGATCTTCCTTTGCCATGGA+TGG + Chr1:24088875-24088894 None:intergenic 45.0%
ATCACAAGACCACTCGTGTT+TGG - Chr1:24089130-24089149 MsG0180001612.01.T01:intron 45.0%
ATCCATGGCAAAGGAAGATC+TGG - Chr1:24088874-24088893 MsG0180001612.01.T01:intron 45.0%
ATTCAGAGGAGTTCCTGTTC+TGG - Chr1:24084784-24084803 MsG0180001612.01.T01:intron 45.0%
ATTGAGACCACTCCTGTTTG+GGG - Chr1:24089039-24089058 MsG0180001612.01.T01:intron 45.0%
CACTGGGAACAAAAGCTGTT+AGG + Chr1:24084249-24084268 None:intergenic 45.0%
CAGAGAAGGGAATTGGGAAT+GGG + Chr1:24087984-24088003 None:intergenic 45.0%
CATCATTGTGCGTATGGGAA+TGG - Chr1:24087833-24087852 MsG0180001612.01.T01:intron 45.0%
CATGGAATAAGTTCCCCATG+AGG + Chr1:24086277-24086296 None:intergenic 45.0%
CATTCCCATACGCACAATGA+TGG + Chr1:24087835-24087854 None:intergenic 45.0%
CATTGTGAAGAGAAAGCGAG+AGG + Chr1:24087926-24087945 None:intergenic 45.0%
CCTGCCAAAATATCCCTGTA+TGG + Chr1:24078808-24078827 None:intergenic 45.0%
CGGAGTTCGAATCTTGATCA+CGG - Chr1:24081702-24081721 MsG0180001612.01.T01:intron 45.0%
CGTGATCAAGATTCGAACTC+CGG + Chr1:24081704-24081723 None:intergenic 45.0%
CGTGCTCATCATACTTGAAG+TGG + Chr1:24087659-24087678 None:intergenic 45.0%
CTCTCGCTTTCTCTTCACAA+TGG - Chr1:24087924-24087943 MsG0180001612.01.T01:intron 45.0%
CTCTCTCTGCCTAAACCATA+AGG - Chr1:24084086-24084105 MsG0180001612.01.T01:intron 45.0%
CTGGTTCAAATCTGGCACAT+TGG + Chr1:24078854-24078873 None:intergenic 45.0%
CTTCAAGTATGATGAGCACG+TGG - Chr1:24087659-24087678 MsG0180001612.01.T01:intron 45.0%
CTTGGAGAAAAGCAGGAAGA+GGG + Chr1:24088012-24088031 None:intergenic 45.0%
CTTTCTCTCCCACAGCTATT+CGG + Chr1:24082560-24082579 None:intergenic 45.0%
CTTTCTTGACTGCTCGATGT+GGG - Chr1:24079145-24079164 MsG0180001612.01.T01:CDS 45.0%
GAAGTGCAGAGAAGGGAATT+GGG + Chr1:24087990-24088009 None:intergenic 45.0%
GAGTCCAAAGAAGGTCAACT+TGG - Chr1:24088245-24088264 MsG0180001612.01.T01:intron 45.0%
GAGTCTTGGAGAGGAATTCT+TGG - Chr1:24084682-24084701 MsG0180001612.01.T01:intron 45.0%
GCAAACGCTTCTCACAATCA+TGG - Chr1:24088687-24088706 MsG0180001612.01.T01:intron 45.0%
GCAATCAAGATCTACAAGGG+AGG + Chr1:24088153-24088172 None:intergenic 45.0%
GCCCAACGAACCTGTTAAAT+AGG + Chr1:24084209-24084228 None:intergenic 45.0%
GGCAAAAATTGCTAGGCTGA+AGG - Chr1:24088960-24088979 MsG0180001612.01.T01:intron 45.0%
GGGAATGGGAGAGAAATAGA+GGG + Chr1:24087970-24087989 None:intergenic 45.0%
GTGCCCATAGTCTTTATCGA+TGG + Chr1:24080473-24080492 None:intergenic 45.0%
GTGGGAATCTCTTAGAGTGA+AGG + Chr1:24079610-24079629 None:intergenic 45.0%
GTTCCCCATGAGGGATAATT+TGG + Chr1:24086267-24086286 None:intergenic 45.0%
TAACATACTCGTAGCACTCC+CGG - Chr1:24087018-24087037 MsG0180001612.01.T01:intron 45.0%
TAACCTCTGTAACAAGTCCC+GGG + Chr1:24087748-24087767 None:intergenic 45.0%
TAGGTCAGTTACAGAGGCAA+TGG - Chr1:24083301-24083320 MsG0180001612.01.T01:intron 45.0%
TCACAAGACCACTCGTGTTT+GGG - Chr1:24089131-24089150 MsG0180001612.01.T01:CDS 45.0%
TCATGCACAGACCAGAATGT+AGG - Chr1:24088899-24088918 MsG0180001612.01.T01:intron 45.0%
TCCTGATTGACAAATCCGGA+GGG - Chr1:24082906-24082925 MsG0180001612.01.T01:intron 45.0%
TCTCAAAGTAAACAGGCCCT+TGG + Chr1:24083764-24083783 None:intergenic 45.0%
TGGGAATGGGAGAGAAATAG+AGG + Chr1:24087971-24087990 None:intergenic 45.0%
TGGGTCCTGATTGACAAATC+CGG - Chr1:24082902-24082921 MsG0180001612.01.T01:intron 45.0%
TTCCAGATCTTCCTTTGCCA+TGG + Chr1:24088879-24088898 None:intergenic 45.0%
TTGTGAAGAGAAAGCGAGAG+GGG + Chr1:24087924-24087943 None:intergenic 45.0%
TTTGCTGCAGTTGCAAGTGT+TGG - Chr1:24088305-24088324 MsG0180001612.01.T01:intron 45.0%
TTTGTAGCCGAATGATTGGC+AGG + Chr1:24083142-24083161 None:intergenic 45.0%
! AATGTAGTGTAGGAGCGTAG+TGG - Chr1:24083531-24083550 MsG0180001612.01.T01:intron 45.0%
! AGCTGAAGCATTTGTGGGAA+AGG - Chr1:24088828-24088847 MsG0180001612.01.T01:intron 45.0%
! CACGGTTTGTTCTTTGCGTT+TGG - Chr1:24082847-24082866 MsG0180001612.01.T01:intron 45.0%
! CGTGCCATACAGGGATATTT+TGG - Chr1:24078801-24078820 MsG0180001612.01.T01:three_prime_UTR 45.0%
! CTTTTGCTCTGGCGTTACAA+GGG + Chr1:24084045-24084064 None:intergenic 45.0%
! GCAACCAAGTTGACCTTCTT+TGG + Chr1:24088252-24088271 None:intergenic 45.0%
! GCTGAAGCATTTGTGGGAAA+GGG - Chr1:24088829-24088848 MsG0180001612.01.T01:intron 45.0%
! TATCTGAGGAGCTTTTGCTC+TGG + Chr1:24084056-24084075 None:intergenic 45.0%
! TCATACCTTTCTCGGCCTTT+TGG + Chr1:24079075-24079094 None:intergenic 45.0%
! TGCTTTTCTCCAAGCTTCGT+TGG - Chr1:24088018-24088037 MsG0180001612.01.T01:intron 45.0%
!! AAACACGAGTGGTCTTGTGA+TGG + Chr1:24089131-24089150 None:intergenic 45.0%
!! AAGCTGTTAGGTACTGGGTT+TGG + Chr1:24084237-24084256 None:intergenic 45.0%
!! AGCTGTTAGGTACTGGGTTT+GGG + Chr1:24084236-24084255 None:intergenic 45.0%
!! ATTGTGAGAAGCGTTTGCTC+GGG + Chr1:24088685-24088704 None:intergenic 45.0%
!! CATTGGTTTAGTTGGAAGGG+AGG - Chr1:24083621-24083640 MsG0180001612.01.T01:intron 45.0%
!! CTGCACATGATTTGGTCTTG+TGG - Chr1:24078740-24078759 MsG0180001612.01.T01:three_prime_UTR 45.0%
!! CTGCAGCACTTGAGTTTTGA+CGG + Chr1:24089254-24089273 None:intergenic 45.0%
!! GATTGTGAGAAGCGTTTGCT+CGG + Chr1:24088686-24088705 None:intergenic 45.0%
!! GGGACATTGGTTTAGTTGGA+AGG - Chr1:24083617-24083636 MsG0180001612.01.T01:intron 45.0%
!! GTTGCAAGTGTTGGTAAAGC+GGG - Chr1:24088314-24088333 MsG0180001612.01.T01:intron 45.0%
!! GTTGCACTATAGCATTGGCT+TGG + Chr1:24078910-24078929 None:intergenic 45.0%
!! TCCTTTAGTGGGCTCTATGT+TGG + Chr1:24079198-24079217 None:intergenic 45.0%
!! TCTAAGTTCTTCTGGGGCAT+TGG - Chr1:24088424-24088443 MsG0180001612.01.T01:intron 45.0%
!! TGATGTCTGGTACCGATGTT+CGG - Chr1:24079386-24079405 MsG0180001612.01.T01:intron 45.0%
!! TGGTAGAGGTGTTGTTACTG+AGG + Chr1:24079705-24079724 None:intergenic 45.0%
!!! CCATACAGGGATATTTTGGC+AGG - Chr1:24078805-24078824 MsG0180001612.01.T01:three_prime_UTR 45.0%
!!! CTTTCCTTGCTGTTTTGTGG+TGG - Chr1:24084650-24084669 MsG0180001612.01.T01:intron 45.0%
!!! GAGCTTTCCTTGCTGTTTTG+TGG - Chr1:24084647-24084666 MsG0180001612.01.T01:intron 45.0%
!!! TGTTTTGTGGTGGATCTGGT+TGG - Chr1:24084660-24084679 MsG0180001612.01.T01:intron 45.0%
!!! TTGCTGTTTTGTGGTGGATC+TGG - Chr1:24084656-24084675 MsG0180001612.01.T01:intron 45.0%
!!! TTGTTTTTTCGGTCCCGAAC+AGG + Chr1:24089102-24089121 None:intergenic 45.0%
!! CAAAATTTAATTATTTAATT+AGG - Chr1:24085847-24085866 MsG0180001612.01.T01:intron 5.0%
!! GTTAAAATAAAAATAAAATA+TGG + Chr1:24081597-24081616 None:intergenic 5.0%
!! TAAATAATTACAAAAATAAA+AGG - Chr1:24080549-24080568 MsG0180001612.01.T01:intron 5.0%
!!! ACTATTATTTTATTTTTTTA+TGG + Chr1:24081117-24081136 None:intergenic 5.0%
!!! TTGATAATTAATATTTTTTA+CGG - Chr1:24081072-24081091 MsG0180001612.01.T01:intron 5.0%
AAGACGAGACCACTCCTGTT+CGG - Chr1:24089085-24089104 MsG0180001612.01.T01:intron 50.0%
AATCACACTAGCGTGCAGAC+GGG - Chr1:24085598-24085617 MsG0180001612.01.T01:intron 50.0%
ACAGTCACGAGTCCACACAA+GGG + Chr1:24079578-24079597 None:intergenic 50.0%
ACTGGAGCCTGCCAATCATT+CGG - Chr1:24083132-24083151 MsG0180001612.01.T01:intron 50.0%
ATCTGGTTGGAGTCTTGGAG+AGG - Chr1:24084673-24084692 MsG0180001612.01.T01:intron 50.0%
CACACAAGGCAGTGAATACC+GGG + Chr1:24087039-24087058 None:intergenic 50.0%
CAGCATGTCTAGTCCAGAAC+AGG + Chr1:24084800-24084819 None:intergenic 50.0%
CAGGAGTGGTCTCAATAAGC+TGG + Chr1:24089035-24089054 None:intergenic 50.0%
CCTTCGAACTTGGAAAGGAG+GGG - Chr1:24079436-24079455 MsG0180001612.01.T01:intron 50.0%
CGAATAGCTGTGGGAGAGAA+AGG - Chr1:24082558-24082577 MsG0180001612.01.T01:intron 50.0%
CTTAGCCAAAAGGCCGAGAA+AGG - Chr1:24079067-24079086 MsG0180001612.01.T01:CDS 50.0%
CTTCGAACTTGGAAAGGAGG+GGG - Chr1:24079437-24079456 MsG0180001612.01.T01:intron 50.0%
GCACACAAGGCAGTGAATAC+CGG + Chr1:24087040-24087059 None:intergenic 50.0%
GCAGAGAAGGGAATTGGGAA+TGG + Chr1:24087985-24088004 None:intergenic 50.0%
GCATAACAAACCGGCACACA+AGG + Chr1:24087053-24087072 None:intergenic 50.0%
GCCAACATAGAGCCCACTAA+AGG - Chr1:24079194-24079213 MsG0180001612.01.T01:CDS 50.0%
GCTTGGAGAAAAGCAGGAAG+AGG + Chr1:24088013-24088032 None:intergenic 50.0%
GCTTTCTTGACTGCTCGATG+TGG - Chr1:24079144-24079163 MsG0180001612.01.T01:CDS 50.0%
GGAACTAAAGGCGACGAAAC+AGG + Chr1:24085165-24085184 None:intergenic 50.0%
GGATAGGGATAGCAAGAGAG+AGG + Chr1:24084136-24084155 None:intergenic 50.0%
GGGACACAAGTAGCTTCACT+AGG - Chr1:24087580-24087599 MsG0180001612.01.T01:intron 50.0%
GTATTCACTGCCTTGTGTGC+CGG - Chr1:24087040-24087059 MsG0180001612.01.T01:intron 50.0%
GTCCTGATTGACAAATCCGG+AGG - Chr1:24082905-24082924 MsG0180001612.01.T01:intron 50.0%
GTGGTCTCAATAAGCTGGTG+TGG + Chr1:24089030-24089049 None:intergenic 50.0%
GTGTTGAAAACCATGGGTCG+CGG + Chr1:24083579-24083598 None:intergenic 50.0%
TACAGTCACGAGTCCACACA+AGG + Chr1:24079579-24079598 None:intergenic 50.0%
TCCCTCCGGATTTGTCAATC+AGG + Chr1:24082910-24082929 None:intergenic 50.0%
TCGTCGCATTCATAAGGGAC+TGG - Chr1:24083114-24083133 MsG0180001612.01.T01:intron 50.0%
TCTTGAGCCTTCCTGGCATA+GGG - Chr1:24084574-24084593 MsG0180001612.01.T01:intron 50.0%
TTAGCGCTTCGCTCATTCAG+AGG - Chr1:24084770-24084789 MsG0180001612.01.T01:intron 50.0%
TTGACACGTCCAACGAAGCT+TGG + Chr1:24088030-24088049 None:intergenic 50.0%
TTGGGATCGAAGGTGAGAGT+GGG - Chr1:24082508-24082527 MsG0180001612.01.T01:intron 50.0%
! AAAGTAGCGCCGAATAGCTG+TGG - Chr1:24082548-24082567 MsG0180001612.01.T01:intron 50.0%
! AAGTAGCGCCGAATAGCTGT+GGG - Chr1:24082549-24082568 MsG0180001612.01.T01:intron 50.0%
! CAGGTGTGGTCTCGTTTTGA+TGG + Chr1:24089179-24089198 None:intergenic 50.0%
! GAAGAGGGAAGTGCAGAGAA+GGG + Chr1:24087997-24088016 None:intergenic 50.0%
! GCGCTACTTTCTCAGTCAAG+TGG + Chr1:24082538-24082557 None:intergenic 50.0%
! GCTTTTGCTCTGGCGTTACA+AGG + Chr1:24084046-24084065 None:intergenic 50.0%
! GGAAGTGCAGAGAAGGGAAT+TGG + Chr1:24087991-24088010 None:intergenic 50.0%
! GGTCAACTTGGTTGCTGCTT+TGG - Chr1:24088257-24088276 MsG0180001612.01.T01:intron 50.0%
! TTTTCGTCCCCAAACAGGAG+TGG + Chr1:24089049-24089068 None:intergenic 50.0%
!! TTGGTTGCTGCTTTGGTTCG+TGG - Chr1:24088264-24088283 MsG0180001612.01.T01:intron 50.0%
AAAGCCAAGCCGTGCCATAC+AGG - Chr1:24078791-24078810 MsG0180001612.01.T01:three_prime_UTR 55.0%
AAGCCAAGCCGTGCCATACA+GGG - Chr1:24078792-24078811 MsG0180001612.01.T01:three_prime_UTR 55.0%
AGACGAGACCACTCCTGTTC+GGG - Chr1:24089086-24089105 MsG0180001612.01.T01:intron 55.0%
CAATCATGGTGCAGTGGCAG+AGG - Chr1:24083074-24083093 MsG0180001612.01.T01:CDS 55.0%
CCCCTCCTTTCCAAGTTCGA+AGG + Chr1:24079439-24079458 None:intergenic 55.0%
CTCTTGAGCCTTCCTGGCAT+AGG - Chr1:24084573-24084592 MsG0180001612.01.T01:intron 55.0%
GGTGGATCTGGTTGGAGTCT+TGG - Chr1:24084668-24084687 MsG0180001612.01.T01:intron 55.0%
GGTTGTCTCTTGAGCCTTCC+TGG - Chr1:24084567-24084586 MsG0180001612.01.T01:intron 55.0%
GTTGGGATCGAAGGTGAGAG+TGG - Chr1:24082507-24082526 MsG0180001612.01.T01:intron 55.0%
TATCCCTGTATGGCACGGCT+TGG + Chr1:24078798-24078817 None:intergenic 55.0%
TCGCACACAAGTGGATGAGC+CGG - Chr1:24081682-24081701 MsG0180001612.01.T01:intron 55.0%
TGAGCACGTGGACCATAACC+CGG - Chr1:24087671-24087690 MsG0180001612.01.T01:intron 55.0%
TTGGCGACACAAGAGAGGAC+TGG - Chr1:24078933-24078952 MsG0180001612.01.T01:exon 55.0%
! ACGCATTGGCGACACAAGAG+AGG - Chr1:24078928-24078947 MsG0180001612.01.T01:exon 55.0%
! AGGATTGGATTGGGGTGGAG+TGG + Chr1:24079629-24079648 None:intergenic 55.0%
! GGAAGAGGGAAGTGCAGAGA+AGG + Chr1:24087998-24088017 None:intergenic 55.0%
! GGATTGGATTGGGGTGGAGT+GGG + Chr1:24079628-24079647 None:intergenic 55.0%
! TTTTCGGTCCCGAACAGGAG+TGG + Chr1:24089097-24089116 None:intergenic 55.0%
!! TCACCCGGGACTTGTTACAG+AGG - Chr1:24087742-24087761 MsG0180001612.01.T01:intron 55.0%
AGGGGTGACTGGTGAGTGCT+AGG + Chr1:24087906-24087925 None:intergenic 60.0%
CCATGGGTCGCGGAAAGTAG+CGG + Chr1:24083569-24083588 None:intergenic 60.0%
GAGAAAGCGAGAGGGGTGAC+TGG + Chr1:24087917-24087936 None:intergenic 60.0%
GGGGTGACTGGTGAGTGCTA+GGG + Chr1:24087905-24087924 None:intergenic 60.0%
GGGTCACACTGAGCCTGTGT+TGG - Chr1:24084997-24085016 MsG0180001612.01.T01:intron 60.0%
! CCGCTACTTTCCGCGACCCA+TGG - Chr1:24083566-24083585 MsG0180001612.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 24078709 24089510 24078709 ID=MsG0180001612.01;Name=MsG0180001612.01
Chr1 mRNA 24078709 24089510 24078709 ID=MsG0180001612.01.T01;Parent=MsG0180001612.01;Name=MsG0180001612.01.T01;_AED=0.48;_eAED=0.58;_QI=0|0.66|0.71|1|1|1|7|229|373
Chr1 exon 24078709 24079389 24078709 ID=MsG0180001612.01.T01:exon:40677;Parent=MsG0180001612.01.T01
Chr1 exon 24079484 24079550 24079484 ID=MsG0180001612.01.T01:exon:40676;Parent=MsG0180001612.01.T01
Chr1 exon 24079863 24079973 24079863 ID=MsG0180001612.01.T01:exon:40675;Parent=MsG0180001612.01.T01
Chr1 exon 24082938 24083105 24082938 ID=MsG0180001612.01.T01:exon:40674;Parent=MsG0180001612.01.T01
Chr1 exon 24084842 24084915 24084842 ID=MsG0180001612.01.T01:exon:40673;Parent=MsG0180001612.01.T01
Chr1 exon 24089131 24089187 24089131 ID=MsG0180001612.01.T01:exon:40672;Parent=MsG0180001612.01.T01
Chr1 exon 24089318 24089510 24089318 ID=MsG0180001612.01.T01:exon:40671;Parent=MsG0180001612.01.T01
Chr1 CDS 24089318 24089510 24089318 ID=MsG0180001612.01.T01:cds;Parent=MsG0180001612.01.T01
Chr1 CDS 24089131 24089187 24089131 ID=MsG0180001612.01.T01:cds;Parent=MsG0180001612.01.T01
Chr1 CDS 24084842 24084915 24084842 ID=MsG0180001612.01.T01:cds;Parent=MsG0180001612.01.T01
Chr1 CDS 24082938 24083105 24082938 ID=MsG0180001612.01.T01:cds;Parent=MsG0180001612.01.T01
Chr1 CDS 24079863 24079973 24079863 ID=MsG0180001612.01.T01:cds;Parent=MsG0180001612.01.T01
Chr1 CDS 24079484 24079550 24079484 ID=MsG0180001612.01.T01:cds;Parent=MsG0180001612.01.T01
Chr1 CDS 24078938 24079389 24078938 ID=MsG0180001612.01.T01:cds;Parent=MsG0180001612.01.T01
Chr1 three_prime_UTR 24078709 24078937 24078709 ID=MsG0180001612.01.T01:three_prime_utr;Parent=MsG0180001612.01.T01
Gene Sequence

>MsG0180001612.01.T01

ATGTGGGTAAAAGAGTCCACATTCAATAGAGCTGCACATGATTTGGTCTTGTGGGTCACACATCCACCATATATCTCTTCACAAAGCCAAGCCGTGCCATACAGGGATATTTTGGCAGGAATGCTAATGAAATGGACACAAACCAATGTGCCAGATTTGAACCAGAATAAAAATTTAAACTTGAATTGGTGGGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTCAGTTACAGAGGCAATGGTCAAAAGGTGTGCCAAGTATCTCAAGGCCTTTTGATCACCGTTTTCAATATCAGGGAATTTCAAGCTCTACCCAGTTGCTAAAAAATTCATCTGAGGAAACACCTGTTTCGTCGCCTTTAGTTCCAGTTTCATCATTCGGTAGTTCACAAGGTCAAGAACAAAATACGAAAGCTATTGCTAAGACAGATAAAGTTCAAGCAATATTAAAGAAAATAAAGCAGAGTCCAAAGAAGGTCAACTTGGTTGCTGCTTTGGTTCGTGGTATGCTTGTTAAAGATGCTTTGCTGCAGTTGCAAGTGTTGGTAAAGCGGGCTTCAAAAACTGTATATCAGGTTATTCATTCAGCCCGAGCAAACGCTTCTCACAATCATGGGTTGAATGCTGATCGCCTAATTGTTGCTGAAGCATTTGTGGGAAAGGGAGATTTTAAGAAGAGAGTTTCCATCCATGGCAAAGGAAGATCTGGAATCATGCACAGACCAGAATGTAGGCTAACAGTTGTACTAAGAGAGATTACCCCTGAAGAAGAGGCAAAAATTGCTAGGCTGAAGGTTCACAACTTTAAGAAGCTAACTAAGAAGGAGGGAAGACTTGTGCCACACCAGCTTATTGAGACCACTCCTGTTTGGGGACGAAAAAATAAATCTAGCAGTCAAGACGAGACCACTCCTGTTCGGGACCGAAAAAACAAATCTAGCCATCACAAGACCACTCGTGTTTGGGACAAAAAAGAAACAAATCTAAGCCATCAAAACGAGACCACACCTGTTAAGGGCCGAAAAAACAAATCTATCCGTAGGGGCCGAAAAAACAAATCTAGCCGTCAAAACTCAAGTGCTGCAGTTGCATGA
Protein sequence

>MsG0180001612.01.T01

MWVKESTFNRAAHDLVLWVTHPPYISSQSQAVPYRDILAGMLMKWTQTNVPDLNQNKNLNLNWWDIKLIRTDTTLDLSQKAEKGQLQRQWSKGVPSISRPFDHRFQYQGISSSTQLLKNSSEETPVSSPLVPVSSFGSSQGQEQNTKAIAKTDKVQAILKKIKQSPKKVNLVAALVRGMLVKDALLQLQVLVKRASKTVYQVIHSARANASHNHGLNADRLIVAEAFVGKGDFKKRVSIHGKGRSGIMHRPECRLTVVLREITPEEEAKIARLKVHNFKKLTKKEGRLVPHQLIETTPVWGRKNKSSSQDETTPVRDRKNKSSHHKTTRVWDKKETNLSHQNETTPVKGRKNKSIRRGRKNKSSRQNSSAAVA*