AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011416.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011416.01.T01 MTR_2g104100 88.264 409 11 3 1 385 1 396 0.0 687
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011416.01.T01 AT1G52500 62.147 354 93 6 1 326 1 341 1.23e-145 418
MsG0280011416.01.T01 AT1G52500 64.094 298 66 4 1 274 1 281 4.21e-133 383
MsG0280011416.01.T01 AT1G52500 66.008 253 62 2 1 229 1 253 9.02e-121 351
MsG0280011416.01.T01 AT1G52500 66.008 253 62 2 1 229 1 253 9.02e-121 351
MsG0280011416.01.T01 AT1G52500 68.468 222 47 1 1 199 1 222 2.62e-109 320

Find 108 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACGGCGCTGACGAGAATT+TGG 0.221084 2:-83686152 MsG0280011416.01.T01:CDS
ATATTTCAGGCATTGGAAAT+TGG 0.240383 2:-83688717 MsG0280011416.01.T01:CDS
TCTCTGTTCTTAGTTCTTAC+AGG 0.249897 2:+83691819 None:intergenic
TAAAGCTAAGTAGCAACTTT+TGG 0.251634 2:-83685891 MsG0280011416.01.T01:exon
TTCTTTGAGGCTTTCCCTCT+GGG 0.288446 2:+83686199 None:intergenic
AAATTATAAATGTTTGGATT+TGG 0.309079 2:+83686421 None:intergenic
CCTCTGCAGAGCTATATTTC+AGG 0.317206 2:-83688730 MsG0280011416.01.T01:intron
GTAGTCAATATCCCACTAAT+TGG 0.319108 2:-83687195 MsG0280011416.01.T01:CDS
ACATGAAAATTATAAATGTT+TGG 0.320798 2:+83686415 None:intergenic
TTGCTGTAACAAAGTATAAA+AGG 0.321116 2:-83691414 MsG0280011416.01.T01:intron
TTTCTTTGAGGCTTTCCCTC+TGG 0.329200 2:+83686198 None:intergenic
CATTCAGCATGGGTTTAAAT+CGG 0.330362 2:+83691864 None:intergenic
AACCAGGCTCGGGGACTAAT+AGG 0.335713 2:-83685985 MsG0280011416.01.T01:CDS
ACCATCAACAAAAGCTTTGC+CGG 0.348394 2:+83687147 None:intergenic
GGTCTATGTGATATCCTCAT+TGG 0.355614 2:-83685660 MsG0280011416.01.T01:three_prime_UTR
TATTTCAGGCATTGGAAATT+GGG 0.367779 2:-83688716 MsG0280011416.01.T01:CDS
TCACAAGTGTTAAAAGAAAC+TGG 0.374623 2:-83686226 MsG0280011416.01.T01:CDS
GAATTCGAAGCTTCCGTTGT+TGG 0.375577 2:-83691632 MsG0280011416.01.T01:CDS
CCGTTTCCCTCTTTCCAATT+CGG 0.381749 2:-83691548 MsG0280011416.01.T01:intron
AGATTCGCATGATAACGTTT+TGG 0.382486 2:-83685784 MsG0280011416.01.T01:three_prime_UTR
ATCAGGTCCAAGCTCAGATA+TGG 0.382869 2:+83689082 None:intergenic
TGGTTTAGTGTATGCTTGCT+TGG 0.412212 2:-83685640 MsG0280011416.01.T01:three_prime_UTR
ATTTCATCACCGCAGGTGGC+AGG 0.416756 2:-83686372 MsG0280011416.01.T01:CDS
CAGAGCTATATTTCAGGCAT+TGG 0.419170 2:-83688724 MsG0280011416.01.T01:CDS
AATTCGAAGCTTCCGTTGTT+GGG 0.422866 2:-83691631 MsG0280011416.01.T01:CDS
ATCATCGGCGACGATGCATT+TGG 0.423442 2:+83691685 None:intergenic
CAATCAAAGAAACGTGTTCA+AGG 0.450717 2:-83685941 MsG0280011416.01.T01:CDS
ATTGTCATCGTCACTTTCCT+CGG 0.455015 2:+83686060 None:intergenic
CAGATAGCTTCTAGCCTGTC+AGG 0.458232 2:-83687525 MsG0280011416.01.T01:CDS
TTCCTATTAGTCCCCGAGCC+TGG 0.459245 2:+83685983 None:intergenic
GTAACTGTGTTAGGTATGGC+TGG 0.461478 2:-83691457 MsG0280011416.01.T01:intron
GCCGGAGCTACCGGAGGTAG+AGG 0.468617 2:-83691753 MsG0280011416.01.T01:CDS
CAAGAAGAAAACTGAAATCA+AGG 0.473543 2:-83689012 MsG0280011416.01.T01:CDS
GGTTTAGTGTATGCTTGCTT+GGG 0.479354 2:-83685639 MsG0280011416.01.T01:three_prime_UTR
GAGCACAATGCCGGAGCTAC+CGG 0.482856 2:-83691762 MsG0280011416.01.T01:exon
GAAAAGAAGAAACCAGGCTC+GGG 0.483523 2:-83685995 MsG0280011416.01.T01:CDS
GGAAAGTCTCAAATCAAAGA+AGG 0.484998 2:-83686131 MsG0280011416.01.T01:CDS
CATTCCCGTGAAAAGAAGCC+CGG 0.485250 2:-83687166 MsG0280011416.01.T01:CDS
GCCTCTACCTCCGGTAGCTC+CGG 0.488209 2:+83691752 None:intergenic
ATTCAGCATGGGTTTAAATC+GGG 0.498348 2:+83691865 None:intergenic
GGAATGAAATATCCAATTAG+TGG 0.507785 2:+83687183 None:intergenic
GACTAATAGGAAACAGACTA+AGG 0.508838 2:-83685972 MsG0280011416.01.T01:CDS
CTGTTGTTCTAGAGCAGAGT+AGG 0.509083 2:+83685836 None:intergenic
TTGAGCAGCTTTCTCCTGAC+AGG 0.509313 2:+83687511 None:intergenic
CTTCTTGCCGCCTCTACCTC+CGG 0.512405 2:+83691743 None:intergenic
CTGTAAATGACGAGGATGAA+TGG 0.513522 2:-83690733 MsG0280011416.01.T01:CDS
TCTATATAAGTGCATTAAAG+AGG 0.514418 2:-83687487 MsG0280011416.01.T01:intron
AGTAAACTCGTCAAGTGTCA+TGG 0.514613 2:+83689046 None:intergenic
CGGTGGAAGAGAACTGTGTC+GGG 0.514616 2:-83691718 MsG0280011416.01.T01:CDS
CCATCAACAAAAGCTTTGCC+GGG 0.519750 2:+83687148 None:intergenic
TCAGGTCCAAGCTCAGATAT+GGG 0.520534 2:+83689083 None:intergenic
GGCTGGTGCTGTATACATCA+AGG 0.525973 2:-83691440 MsG0280011416.01.T01:CDS
GAAAGTCTCAAATCAAAGAA+GGG 0.526412 2:-83686130 MsG0280011416.01.T01:CDS
ATCATGCGAATCTATGCTGC+AGG 0.529383 2:+83685794 None:intergenic
GAGAGTACCGAATTGGAAAG+AGG 0.538227 2:+83691541 None:intergenic
TGTTGTTATACATTCAGCAT+GGG 0.541733 2:+83691854 None:intergenic
ATGTTGTTATACATTCAGCA+TGG 0.542719 2:+83691853 None:intergenic
GTGCCTCCCATATCTGAGCT+TGG 0.543407 2:-83689089 MsG0280011416.01.T01:CDS
TTGTTGCAGCTCGTCGGAAG+GGG 0.544764 2:-83691601 MsG0280011416.01.T01:CDS
ACGATTGATTTCATCACCGC+AGG 0.546236 2:-83686379 MsG0280011416.01.T01:CDS
GTCGATGACTTTGTCATCAT+CGG 0.552732 2:+83691670 None:intergenic
GATTGTTGCAGCTCGTCGGA+AGG 0.555315 2:-83691603 MsG0280011416.01.T01:CDS
GTAAACTCGTCAAGTGTCAT+GGG 0.556504 2:+83689047 None:intergenic
GTGACGACGGAGCACAATGC+CGG 0.559922 2:-83691771 MsG0280011416.01.T01:exon
GTCGGAAGGGGAAGAATATG+TGG 0.563477 2:-83691589 MsG0280011416.01.T01:CDS
CCAGAGTTGCAAAAGCTAAG+TGG 0.563520 2:-83686250 MsG0280011416.01.T01:CDS
GATATGGGAGGCACTGATGT+TGG 0.563853 2:+83689098 None:intergenic
GAATGAAATATCCAATTAGT+GGG 0.570260 2:+83687184 None:intergenic
AAGAAACTGGCAAGCCCAGA+GGG 0.571679 2:-83686213 MsG0280011416.01.T01:CDS
AGAGGCGGCAAGAAGAGCGG+TGG 0.572464 2:-83691735 MsG0280011416.01.T01:CDS
TGAAAAGAAGAAACCAGGCT+CGG 0.576111 2:-83685996 MsG0280011416.01.T01:CDS
GATGACAATGATGGTGATGC+TGG 0.577086 2:-83686046 MsG0280011416.01.T01:CDS
GTGCTCCGTCGTCACTGTGA+TGG 0.579220 2:+83691779 None:intergenic
AGAGTACCGAATTGGAAAGA+GGG 0.583270 2:+83691542 None:intergenic
GCGGTGGAAGAGAACTGTGT+CGG 0.583991 2:-83691719 MsG0280011416.01.T01:CDS
ATCAAAGTAGTAGAAGTACT+AGG 0.585884 2:-83685916 MsG0280011416.01.T01:CDS
ATTGTTGCAGCTCGTCGGAA+GGG 0.588802 2:-83691602 MsG0280011416.01.T01:CDS
TTTCATCACCGCAGGTGGCA+GGG 0.589885 2:-83686371 MsG0280011416.01.T01:intron
AGACGATTGTTGCAGCTCGT+CGG 0.595174 2:-83691607 MsG0280011416.01.T01:CDS
TCCAGGCAAGGATTCATCCA+CGG 0.599987 2:-83687548 MsG0280011416.01.T01:intron
GCAGAGTAGGAACACAGCCA+TGG 0.602255 2:+83685849 None:intergenic
CAAGTTGAAAAGAAGAAACC+AGG 0.602633 2:-83686001 MsG0280011416.01.T01:CDS
ATTGATTTCATCACCGCAGG+TGG 0.604046 2:-83686376 MsG0280011416.01.T01:CDS
ATGGCATACCCTGCCACCTG+CGG 0.606176 2:+83686363 None:intergenic
CTCTGCTCTAGAACAACAGA+AGG 0.606847 2:-83685832 MsG0280011416.01.T01:three_prime_UTR
CCGAATTGGAAAGAGGGAAA+CGG 0.607478 2:+83691548 None:intergenic
AGGCTAGAAGCTATCTGCCG+TGG 0.612330 2:+83687531 None:intergenic
GGTAGAGGCGGCAAGAAGAG+CGG 0.618561 2:-83691738 MsG0280011416.01.T01:CDS
GCTCTAGAACAACAGAAGGA+TGG 0.619271 2:-83685828 MsG0280011416.01.T01:three_prime_UTR
GGAGCTACCGGAGGTAGAGG+CGG 0.620805 2:-83691750 MsG0280011416.01.T01:CDS
CAAATCAAAGAAGGGGACGA+AGG 0.629764 2:-83686122 MsG0280011416.01.T01:CDS
GCTGGTGCTGTATACATCAA+GGG 0.640257 2:-83691439 MsG0280011416.01.T01:CDS
GAAAGTGACGATGACAATGA+TGG 0.640739 2:-83686055 MsG0280011416.01.T01:CDS
AAAAGAAGAAACCAGGCTCG+GGG 0.641315 2:-83685994 MsG0280011416.01.T01:CDS
GTAGATGATGATAACAATGA+CGG 0.642794 2:-83686169 MsG0280011416.01.T01:CDS
ACTAATAGGAAACAGACTAA+GGG 0.645351 2:-83685971 MsG0280011416.01.T01:CDS
CAGGTCTGCTGTAAATGACG+AGG 0.648999 2:-83690741 MsG0280011416.01.T01:CDS
AAAGTCTCAAATCAAAGAAG+GGG 0.649563 2:-83686129 MsG0280011416.01.T01:CDS
CACAATGCCGGAGCTACCGG+AGG 0.654051 2:-83691759 MsG0280011416.01.T01:exon
CTAAGAACAGAGAATAAACG+CGG 0.655329 2:-83691809 MsG0280011416.01.T01:five_prime_UTR
AACAATCGTCTTCCCAACAA+CGG 0.658793 2:+83691619 None:intergenic
AAATTCCATCACAGTGACGA+CGG 0.665991 2:-83691784 MsG0280011416.01.T01:five_prime_UTR
AAAGAAACTGGCAAGCCCAG+AGG 0.666706 2:-83686214 MsG0280011416.01.T01:CDS
GATGATGACAAAGTCATCGA+CGG 0.687773 2:-83691668 MsG0280011416.01.T01:CDS
AAGCATACACTAAACCAATG+AGG 0.688443 2:+83685646 None:intergenic
AATTGGAAAGAGGGAAACGG+AGG 0.705743 2:+83691551 None:intergenic
GGTCCAAGCTCAGATATGGG+AGG 0.706462 2:+83689086 None:intergenic
TAAGAACAGAGAATAAACGC+GGG 0.712595 2:-83691808 MsG0280011416.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTAATTATTTATTATT+AGG - Chr2:83689731-83689750 MsG0280011416.01.T01:intron 0.0%
!! TTATTTATTATTAGGAATTA+AGG - Chr2:83689739-83689758 MsG0280011416.01.T01:intron 10.0%
!!! ATATTTTCATTTGTTATTAT+TGG + Chr2:83691023-83691042 None:intergenic 10.0%
!! AAATTATAAATGTTTGGATT+TGG + Chr2:83691056-83691075 None:intergenic 15.0%
!! AAGACAGAAAATAAAATATT+TGG + Chr2:83688532-83688551 None:intergenic 15.0%
!! AATAAAAAACTTTGAATACT+TGG + Chr2:83686771-83686790 None:intergenic 15.0%
!! ACAGAAATAAAAAATGTAAA+GGG + Chr2:83688658-83688677 None:intergenic 15.0%
!! ACATGAAAATTATAAATGTT+TGG + Chr2:83691062-83691081 None:intergenic 15.0%
!! AGACAGAAAATAAAATATTT+GGG + Chr2:83688531-83688550 None:intergenic 15.0%
!! CTATAATATAATCAATTTCT+TGG - Chr2:83690930-83690949 MsG0280011416.01.T01:intron 15.0%
!! CTGTAAAATAAATTTATTTG+TGG + Chr2:83690225-83690244 None:intergenic 15.0%
!! TAGAAATAAATAAAAGATGA+TGG + Chr2:83691165-83691184 None:intergenic 15.0%
!! TTAACTATATGATGATATAA+TGG - Chr2:83688948-83688967 MsG0280011416.01.T01:intron 15.0%
!! TTTAACATTATTGAGAAAAT+GGG - Chr2:83687171-83687190 MsG0280011416.01.T01:CDS 15.0%
!! TTTCAATTCTATATCAAAAA+AGG + Chr2:83689498-83689517 None:intergenic 15.0%
!!! AATCAATTTACTACAATTTT+AGG + Chr2:83690469-83690488 None:intergenic 15.0%
!!! ATCAATTTACTACAATTTTA+GGG + Chr2:83690468-83690487 None:intergenic 15.0%
!!! CACAAATAAATTTATTTTAC+AGG - Chr2:83690223-83690242 MsG0280011416.01.T01:intron 15.0%
!!! CTAGATTTTTATAATTCAAT+TGG - Chr2:83689563-83689582 MsG0280011416.01.T01:intron 15.0%
!!! TTTATTTTTAACTCAAAGTA+GGG + Chr2:83690359-83690378 None:intergenic 15.0%
!!! TTTTAACATTATTGAGAAAA+TGG - Chr2:83687170-83687189 MsG0280011416.01.T01:CDS 15.0%
!!! TTTTATTTTTAACTCAAAGT+AGG + Chr2:83690360-83690379 None:intergenic 15.0%
!!! TTTTGATATAGAATTGAAAT+CGG - Chr2:83689499-83689518 MsG0280011416.01.T01:intron 15.0%
!! AAAATACATGGAAAATATCA+AGG + Chr2:83688843-83688862 None:intergenic 20.0%
!! AAATCTAATGACTTCAAATT+TGG + Chr2:83687960-83687979 None:intergenic 20.0%
!! AATGGCATACATATAATAAA+AGG - Chr2:83689314-83689333 MsG0280011416.01.T01:intron 20.0%
!! ACTTGAATATAATTCACATT+TGG + Chr2:83686168-83686187 None:intergenic 20.0%
!! AGAACAATAAGCAATTTAAA+GGG + Chr2:83690027-83690046 None:intergenic 20.0%
!! ATAGACTAATATCATATACT+TGG - Chr2:83689029-83689048 MsG0280011416.01.T01:CDS 20.0%
!! ATATCAAACTCTTATTAGTA+TGG + Chr2:83688332-83688351 None:intergenic 20.0%
!! ATGGCATACATATAATAAAA+GGG - Chr2:83689315-83689334 MsG0280011416.01.T01:intron 20.0%
!! CACAGAAATAAAAAATGTAA+AGG + Chr2:83688659-83688678 None:intergenic 20.0%
!! GTGTTCTTAACTTATTATTT+GGG - Chr2:83689457-83689476 MsG0280011416.01.T01:intron 20.0%
!! TAAAAGAAAAGAAACCAATA+TGG + Chr2:83689100-83689119 None:intergenic 20.0%
!! TCAAATAAAAAACATAGCAT+CGG + Chr2:83686877-83686896 None:intergenic 20.0%
!! TGTAAATTTAAATACGCAAA+TGG - Chr2:83686424-83686443 MsG0280011416.01.T01:CDS 20.0%
!! TGTGTTCTTAACTTATTATT+TGG - Chr2:83689456-83689475 MsG0280011416.01.T01:intron 20.0%
!! TTAACATTATTGAGAAAATG+GGG - Chr2:83687172-83687191 MsG0280011416.01.T01:CDS 20.0%
!! TTACTAACGTTTAATATTTG+TGG - Chr2:83690635-83690654 MsG0280011416.01.T01:intron 20.0%
!! TTTATTATTAGGAATTAAGG+AGG - Chr2:83689742-83689761 MsG0280011416.01.T01:intron 20.0%
!! TTTGTTCAGAAGAAATATAT+TGG - Chr2:83689223-83689242 MsG0280011416.01.T01:intron 20.0%
!!! AACTTTAAGTGTTTTCATTA+GGG - Chr2:83686545-83686564 MsG0280011416.01.T01:intron 20.0%
!!! AGTTTGTTGGATATTATTTT+GGG - Chr2:83687708-83687727 MsG0280011416.01.T01:intron 20.0%
!!! ATAGACCAAAGATATTTTTT+AGG + Chr2:83691801-83691820 None:intergenic 20.0%
!!! ATTTACATTTTCATACTACA+CGG + Chr2:83686411-83686430 None:intergenic 20.0%
!!! GTATTCAAAGTTTTTTATTC+AGG - Chr2:83686772-83686791 MsG0280011416.01.T01:intron 20.0%
!!! TAACTTTAAGTGTTTTCATT+AGG - Chr2:83686544-83686563 MsG0280011416.01.T01:intron 20.0%
!!! TATTTTAACAATATCTCCAA+CGG + Chr2:83687873-83687892 None:intergenic 20.0%
!!! TTTAGCCTCTATATTTTTTA+TGG + Chr2:83690064-83690083 None:intergenic 20.0%
!!! TTTTAATTCTCATCTAAACT+TGG - Chr2:83688912-83688931 MsG0280011416.01.T01:intron 20.0%
! AAAAACTTTGAATACTTGGA+AGG + Chr2:83686767-83686786 None:intergenic 25.0%
! AAAATGAAATAACCACTCAA+GGG + Chr2:83690141-83690160 None:intergenic 25.0%
! AAGTATCTATTTGTTCAATC+TGG + Chr2:83689132-83689151 None:intergenic 25.0%
! AATGATAGTTTATTAGTCAC+TGG + Chr2:83689838-83689857 None:intergenic 25.0%
! AGACTCCATAAAAAATATAG+AGG - Chr2:83690056-83690075 MsG0280011416.01.T01:intron 25.0%
! AGCTAAATACCATAGTAAAA+GGG + Chr2:83690417-83690436 None:intergenic 25.0%
! ATAAACTATCATTCTAGCAT+TGG - Chr2:83689845-83689864 MsG0280011416.01.T01:intron 25.0%
! ATACAATAAGTTATAAGGCA+TGG + Chr2:83689896-83689915 None:intergenic 25.0%
! ATTCAATTGGTCAAACAATT+AGG - Chr2:83689576-83689595 MsG0280011416.01.T01:intron 25.0%
! CAAAATAATATCCAACAAAC+TGG + Chr2:83687709-83687728 None:intergenic 25.0%
! CAATCAAGAATACAAGTTTA+GGG + Chr2:83690538-83690557 None:intergenic 25.0%
! CAATTCTATATCAAAAAAGG+TGG + Chr2:83689495-83689514 None:intergenic 25.0%
! CAGAACAATAAGCAATTTAA+AGG + Chr2:83690028-83690047 None:intergenic 25.0%
! CTTTAAATTGCTTATTGTTC+TGG - Chr2:83690026-83690045 MsG0280011416.01.T01:intron 25.0%
! GAAACATGATATTGTAAAAC+TGG + Chr2:83686360-83686379 None:intergenic 25.0%
! GAATGAAATATCCAATTAGT+GGG + Chr2:83690293-83690312 None:intergenic 25.0%
! GGGAAATACAATAAGTTATA+AGG + Chr2:83689901-83689920 None:intergenic 25.0%
! GTAAATATAAACTTCTTCAC+AGG - Chr2:83686714-83686733 MsG0280011416.01.T01:intron 25.0%
! GTGTGTTTCATATAATATGT+AGG + Chr2:83690986-83691005 None:intergenic 25.0%
! GTTAAAAAAAGTCAAATGAG+AGG + Chr2:83688018-83688037 None:intergenic 25.0%
! TAAATAAAGGTTAGATGTCA+TGG + Chr2:83687268-83687287 None:intergenic 25.0%
! TAATACCTTCAAAACAATCA+AGG + Chr2:83690690-83690709 None:intergenic 25.0%
! TAATATATAGTAGTCACAGA+TGG + Chr2:83687008-83687027 None:intergenic 25.0%
! TACTTTCATGTTACATACTA+TGG - Chr2:83687784-83687803 MsG0280011416.01.T01:intron 25.0%
! TATGATGATATAATGGCTAA+TGG - Chr2:83688955-83688974 MsG0280011416.01.T01:intron 25.0%
! TCCATAGTTAACAAAATACA+TGG + Chr2:83688855-83688874 None:intergenic 25.0%
! TCCTGGTGTATTATAAATAA+AGG + Chr2:83687281-83687300 None:intergenic 25.0%
! TCTATATAAGTGCATTAAAG+AGG - Chr2:83689987-83690006 MsG0280011416.01.T01:intron 25.0%
! TCTTCACTTTAACATGATTA+CGG - Chr2:83687526-83687545 MsG0280011416.01.T01:CDS 25.0%
! TTATGCTCTTATGTATGAAA+TGG + Chr2:83688044-83688063 None:intergenic 25.0%
! TTGCTGTAACAAAGTATAAA+AGG - Chr2:83686060-83686079 MsG0280011416.01.T01:CDS 25.0%
! TTGGTGTGATTTACTATTAT+TGG - Chr2:83690555-83690574 MsG0280011416.01.T01:intron 25.0%
!! AACTTGAACATTCAAAGTTT+TGG + Chr2:83687150-83687169 None:intergenic 25.0%
!! ACCTTTATTTATAATACACC+AGG - Chr2:83687277-83687296 MsG0280011416.01.T01:intron 25.0%
!! ATAATTTTCATGTGATTGCA+GGG - Chr2:83691069-83691088 MsG0280011416.01.T01:intron 25.0%
!! TACTTTTCTTGTCAATTACA+AGG - Chr2:83687080-83687099 MsG0280011416.01.T01:intron 25.0%
!! TATAATTTTCATGTGATTGC+AGG - Chr2:83691068-83691087 MsG0280011416.01.T01:intron 25.0%
!! TCAAGGATTTAAAATCATTG+AGG + Chr2:83688826-83688845 None:intergenic 25.0%
!! TCCATGTATTTTGTTAACTA+TGG - Chr2:83688851-83688870 MsG0280011416.01.T01:intron 25.0%
!! TTCATACATAAGAGCATAAT+CGG - Chr2:83688045-83688064 MsG0280011416.01.T01:intron 25.0%
!! TTTTGAACAGGATAATTTTC+AGG - Chr2:83691775-83691794 MsG0280011416.01.T01:exon 25.0%
!!! ATGACATTTTTTGATTCATG+AGG - Chr2:83689652-83689671 MsG0280011416.01.T01:intron 25.0%
!!! ATTTTAACAATATCTCCAAC+GGG + Chr2:83687872-83687891 None:intergenic 25.0%
!!! CAGTTTGTTGGATATTATTT+TGG - Chr2:83687707-83687726 MsG0280011416.01.T01:intron 25.0%
!!! CTTTTTTGTCAAGATTTTGT+TGG - Chr2:83686379-83686398 MsG0280011416.01.T01:CDS 25.0%
!!! GTTTGTTGGATATTATTTTG+GGG - Chr2:83687709-83687728 MsG0280011416.01.T01:intron 25.0%
!!! TTATACCTTGATTGTTTTGA+AGG - Chr2:83690682-83690701 MsG0280011416.01.T01:intron 25.0%
!!! TTTTTGCTGTAAAATAGCTA+TGG - Chr2:83687624-83687643 MsG0280011416.01.T01:intron 25.0%
AAAAAGCCTGGAAAAATAAG+TGG - Chr2:83690170-83690189 MsG0280011416.01.T01:intron 30.0%
AAACTAGGTTATTAACCTGT+TGG - Chr2:83687350-83687369 MsG0280011416.01.T01:intron 30.0%
AAAGTCTCAAATCAAAGAAG+GGG - Chr2:83691345-83691364 MsG0280011416.01.T01:intron 30.0%
AAATGAAATAACCACTCAAG+GGG + Chr2:83690140-83690159 None:intergenic 30.0%
AAGAAAAGAAACCAATATGG+AGG + Chr2:83689097-83689116 None:intergenic 30.0%
AAGAAGAAACGTGAACAATT+TGG + Chr2:83689352-83689371 None:intergenic 30.0%
AATAAGAGCAATGTTCAGAA+TGG + Chr2:83691133-83691152 None:intergenic 30.0%
AATATTCCCCTTATAAGACT+TGG - Chr2:83687889-83687908 MsG0280011416.01.T01:intron 30.0%
ACAGATATTGTCCAAAATGT+AGG - Chr2:83687105-83687124 MsG0280011416.01.T01:intron 30.0%
ACTAATAGGAAACAGACTAA+GGG - Chr2:83691503-83691522 MsG0280011416.01.T01:intron 30.0%
AGTTACAAGCATAAATCGTA+AGG + Chr2:83686003-83686022 None:intergenic 30.0%
ATAAGTGCATTAAAGAGGTA+GGG - Chr2:83689992-83690011 MsG0280011416.01.T01:intron 30.0%
ATCATTCCCCAATAATATGA+AGG + Chr2:83690611-83690630 None:intergenic 30.0%
ATCTTCACAATGCTTTCAAA+AGG - Chr2:83690823-83690842 MsG0280011416.01.T01:intron 30.0%
ATGTATAAAGTTCAAACTGC+AGG + Chr2:83687991-83688010 None:intergenic 30.0%
ATGTTGTTATACATTCAGCA+TGG + Chr2:83685624-83685643 None:intergenic 30.0%
ATTCACTAAAAGCTCTTTAG+AGG - Chr2:83687230-83687249 MsG0280011416.01.T01:CDS 30.0%
ATTCGTCTATTTGATCTTCA+AGG + Chr2:83687462-83687481 None:intergenic 30.0%
ATTGATCCTATAACACATCT+GGG + Chr2:83690887-83690906 None:intergenic 30.0%
CAAACTCAGATGTAAAGTTA+TGG - Chr2:83686496-83686515 MsG0280011416.01.T01:intron 30.0%
CAAGAAGAAAACTGAAATCA+AGG - Chr2:83688462-83688481 MsG0280011416.01.T01:intron 30.0%
CAGCTAAATACCATAGTAAA+AGG + Chr2:83690418-83690437 None:intergenic 30.0%
CATAACTTTACATCTGAGTT+TGG + Chr2:83686498-83686517 None:intergenic 30.0%
CCAATCAAGAATACAAGTTT+AGG + Chr2:83690539-83690558 None:intergenic 30.0%
CCTAAACTTGTATTCTTGAT+TGG - Chr2:83690536-83690555 MsG0280011416.01.T01:intron 30.0%
CTTCACTTTAACATGATTAC+GGG - Chr2:83687527-83687546 MsG0280011416.01.T01:CDS 30.0%
GAAAATGAAATAACCACTCA+AGG + Chr2:83690142-83690161 None:intergenic 30.0%
GAAAGTCTCAAATCAAAGAA+GGG - Chr2:83691344-83691363 MsG0280011416.01.T01:intron 30.0%
GGAATGAAATATCCAATTAG+TGG + Chr2:83690294-83690313 None:intergenic 30.0%
GTAACAAAGTATAAAAGGTG+AGG - Chr2:83686065-83686084 MsG0280011416.01.T01:CDS 30.0%
GTAAGATTCTGATTACATTC+AGG - Chr2:83687588-83687607 MsG0280011416.01.T01:intron 30.0%
GTAGATGATGATAACAATGA+CGG - Chr2:83691305-83691324 MsG0280011416.01.T01:intron 30.0%
TAATAGTTGCTAACAGCTTA+TGG + Chr2:83689536-83689555 None:intergenic 30.0%
TATAAGTGCATTAAAGAGGT+AGG - Chr2:83689991-83690010 MsG0280011416.01.T01:intron 30.0%
TATATTTCCTTCTGTGTAGT+GGG - Chr2:83686576-83686595 MsG0280011416.01.T01:intron 30.0%
TATTGATCCTATAACACATC+TGG + Chr2:83690888-83690907 None:intergenic 30.0%
TCACAAGTGTTAAAAGAAAC+TGG - Chr2:83691248-83691267 MsG0280011416.01.T01:intron 30.0%
TCAGGCCTAAAAAATATCTT+TGG - Chr2:83691793-83691812 MsG0280011416.01.T01:five_prime_UTR 30.0%
TCTTCACAATGCTTTCAAAA+GGG - Chr2:83690824-83690843 MsG0280011416.01.T01:intron 30.0%
TGTTGTTATACATTCAGCAT+GGG + Chr2:83685623-83685642 None:intergenic 30.0%
TTATATTTCCTTCTGTGTAG+TGG - Chr2:83686575-83686594 MsG0280011416.01.T01:intron 30.0%
TTCAAAAAGAAAAAAGACCG+AGG - Chr2:83691397-83691416 MsG0280011416.01.T01:intron 30.0%
TTTATGCTTGTAACTGTGTT+AGG - Chr2:83686008-83686027 MsG0280011416.01.T01:CDS 30.0%
! AAAGCTAAGTAGCAACTTTT+GGG - Chr2:83691584-83691603 MsG0280011416.01.T01:CDS 30.0%
! AATGTTAACGTCTTTTGAAC+AGG - Chr2:83691763-83691782 MsG0280011416.01.T01:exon 30.0%
! ATTGTATTTCCCTTATTTCC+AGG - Chr2:83689909-83689928 MsG0280011416.01.T01:intron 30.0%
! CTTTAAGAGATTTGATCGTT+AGG - Chr2:83689369-83689388 MsG0280011416.01.T01:intron 30.0%
! GTTTTATCATGAATCTTGTC+CGG + Chr2:83689629-83689648 None:intergenic 30.0%
! TAAAGCTAAGTAGCAACTTT+TGG - Chr2:83691583-83691602 MsG0280011416.01.T01:CDS 30.0%
! TAGAAGGTATAGAACAAACT+AGG - Chr2:83687335-83687354 MsG0280011416.01.T01:intron 30.0%
! TATATTTCTGTGAAGCAGAA+GGG - Chr2:83687564-83687583 MsG0280011416.01.T01:intron 30.0%
! TTTTATCTAGTCCTCCATAT+TGG - Chr2:83689083-83689102 MsG0280011416.01.T01:CDS 30.0%
! TTTTTGTTAGAGTTGACGAA+TGG - Chr2:83687500-83687519 MsG0280011416.01.T01:CDS 30.0%
!! AGTGGTTATTTCATTTTCGA+TGG - Chr2:83690144-83690163 MsG0280011416.01.T01:intron 30.0%
!! ATATTTCAGGCATTGGAAAT+TGG - Chr2:83688757-83688776 MsG0280011416.01.T01:intron 30.0%
!! ATCAAAGTAGTAGAAGTACT+AGG - Chr2:83691558-83691577 MsG0280011416.01.T01:CDS 30.0%
!! ATCTACACTTGTTTTCTTTG+AGG + Chr2:83691291-83691310 None:intergenic 30.0%
!! GTGGTTATTTCATTTTCGAT+GGG - Chr2:83690145-83690164 MsG0280011416.01.T01:intron 30.0%
!! TACATTCAGGTTGTAAGTTT+AGG - Chr2:83687601-83687620 MsG0280011416.01.T01:intron 30.0%
!! TATTTCAGGCATTGGAAATT+GGG - Chr2:83688758-83688777 MsG0280011416.01.T01:intron 30.0%
!! TGGTTATTTCATTTTCGATG+GGG - Chr2:83690146-83690165 MsG0280011416.01.T01:intron 30.0%
!! TTGATCTTCAAGGTATTGTA+TGG + Chr2:83687452-83687471 None:intergenic 30.0%
!! TTTGAAAGCATTGTGAAGAT+TGG + Chr2:83690823-83690842 None:intergenic 30.0%
!! TTTTGGAAATAGCATTTCAC+TGG - Chr2:83689779-83689798 MsG0280011416.01.T01:intron 30.0%
!!! ATTTATTTTGTGTCTGTGTG+TGG - Chr2:83689289-83689308 MsG0280011416.01.T01:intron 30.0%
!!! GTTTTGGAAAATATTCGTGT+TGG + Chr2:83687134-83687153 None:intergenic 30.0%
!!! GTTTTGGTTTTATGATCTGT+TGG - Chr2:83691706-83691725 MsG0280011416.01.T01:CDS 30.0%
!!! TCGGTCTTTTTTCTTTTTGA+AGG + Chr2:83691398-83691417 None:intergenic 30.0%
!!! TTAGAATTGTTTTTTGGCCA+TGG - Chr2:83691608-83691627 MsG0280011416.01.T01:CDS 30.0%
!!! TTGGGCTTAGAATTGTTTTT+TGG - Chr2:83691602-83691621 MsG0280011416.01.T01:CDS 30.0%
!!! TTTATTTTGTGTCTGTGTGT+GGG - Chr2:83689290-83689309 MsG0280011416.01.T01:intron 30.0%
AAACTTGAGTATAACGTGTG+AGG + Chr2:83686294-83686313 None:intergenic 35.0%
AAATGAAAGATCCGCTTACT+TGG + Chr2:83688803-83688822 None:intergenic 35.0%
AACTTTACCACTTGTGTCTT+TGG - Chr2:83686832-83686851 MsG0280011416.01.T01:intron 35.0%
AAGCATACACTAAACCAATG+AGG + Chr2:83691831-83691850 None:intergenic 35.0%
ACTTTACCACTTGTGTCTTT+GGG - Chr2:83686833-83686852 MsG0280011416.01.T01:intron 35.0%
ATATAGAGGCTAAAACCTGT+AGG - Chr2:83690070-83690089 MsG0280011416.01.T01:intron 35.0%
ATATTGCATCAGCAAGATGA+TGG - Chr2:83689060-83689079 MsG0280011416.01.T01:CDS 35.0%
ATCGTAAGGATTATGAAGCT+AGG + Chr2:83685989-83686008 None:intergenic 35.0%
ATGGATGACAATTTGCAAGT+AGG + Chr2:83688313-83688332 None:intergenic 35.0%
ATTCAGCATGGGTTTAAATC+GGG + Chr2:83685612-83685631 None:intergenic 35.0%
CAATCAAAGAAACGTGTTCA+AGG - Chr2:83691533-83691552 MsG0280011416.01.T01:intron 35.0%
CATTCAGCATGGGTTTAAAT+CGG + Chr2:83685613-83685632 None:intergenic 35.0%
CCTGTAGGTTATTCAATTTG+CGG - Chr2:83690085-83690104 MsG0280011416.01.T01:intron 35.0%
CTAAGAACAGAGAATAAACG+CGG - Chr2:83685665-83685684 MsG0280011416.01.T01:three_prime_UTR 35.0%
CTATTTGTTCAATCTGGTCA+AGG + Chr2:83689126-83689145 None:intergenic 35.0%
GACTAATAGGAAACAGACTA+AGG - Chr2:83691502-83691521 MsG0280011416.01.T01:intron 35.0%
GGAAAGTCTCAAATCAAAGA+AGG - Chr2:83691343-83691362 MsG0280011416.01.T01:intron 35.0%
GTAGTCAATATCCCACTAAT+TGG - Chr2:83690279-83690298 MsG0280011416.01.T01:intron 35.0%
GTTCTATACCTTCTAAGCAA+GGG + Chr2:83687330-83687349 None:intergenic 35.0%
GTTTATATCCCTTGCTTAGA+AGG - Chr2:83687319-83687338 MsG0280011416.01.T01:intron 35.0%
TAACCACTGAGAGAACTTAT+AGG + Chr2:83686692-83686711 None:intergenic 35.0%
TAAGAACAGAGAATAAACGC+GGG - Chr2:83685666-83685685 MsG0280011416.01.T01:three_prime_UTR 35.0%
TACATCCATACGTGATTTCA+TGG - Chr2:83687044-83687063 MsG0280011416.01.T01:intron 35.0%
TCGAAAAAGCAGTTGAAGTT+GGG - Chr2:83690249-83690268 MsG0280011416.01.T01:intron 35.0%
TCGTAAGGATTATGAAGCTA+GGG + Chr2:83685988-83686007 None:intergenic 35.0%
TGAATGATGACAAACTGAAG+TGG - Chr2:83686897-83686916 MsG0280011416.01.T01:intron 35.0%
TGCAGCAATGTGATTTAATC+TGG + Chr2:83688210-83688229 None:intergenic 35.0%
TGGATGACAATTTGCAAGTA+GGG + Chr2:83688312-83688331 None:intergenic 35.0%
TGTTCTATACCTTCTAAGCA+AGG + Chr2:83687331-83687350 None:intergenic 35.0%
TTATTAGGAATTAAGGAGGC+AGG - Chr2:83689746-83689765 MsG0280011416.01.T01:intron 35.0%
! AGAGTGCCTTCATATTATTG+GGG - Chr2:83690602-83690621 MsG0280011416.01.T01:intron 35.0%
! CAAGTTGAAAAGAAGAAACC+AGG - Chr2:83691473-83691492 MsG0280011416.01.T01:intron 35.0%
! CAGAGTGCCTTCATATTATT+GGG - Chr2:83690601-83690620 MsG0280011416.01.T01:intron 35.0%
! CATTCTTGTTTCCAGTTTGT+TGG - Chr2:83687695-83687714 MsG0280011416.01.T01:intron 35.0%
! CTATATTTCTGTGAAGCAGA+AGG - Chr2:83687563-83687582 MsG0280011416.01.T01:intron 35.0%
! GTATTCCAGTTTGAAACTCA+CGG - Chr2:83690734-83690753 MsG0280011416.01.T01:CDS 35.0%
! TATTCCAGTTTGAAACTCAC+GGG - Chr2:83690735-83690754 MsG0280011416.01.T01:CDS 35.0%
! TCTCTGTTCTTAGTTCTTAC+AGG + Chr2:83685658-83685677 None:intergenic 35.0%
! TGAATCGTACCCTTTTACTA+TGG - Chr2:83690405-83690424 MsG0280011416.01.T01:intron 35.0%
! TGAATGGTCTGAAATCTAGT+TGG - Chr2:83689171-83689190 MsG0280011416.01.T01:intron 35.0%
!! AGATTCGCATGATAACGTTT+TGG - Chr2:83691690-83691709 MsG0280011416.01.T01:CDS 35.0%
!! GGTTATTTCATTTTCGATGG+GGG - Chr2:83690147-83690166 MsG0280011416.01.T01:intron 35.0%
!! TTAACGGGAAAGGTTTTTAG+AGG - Chr2:83689685-83689704 MsG0280011416.01.T01:intron 35.0%
!!! ATTACCAGTGTTGACGTTTT+AGG - Chr2:83686209-83686228 MsG0280011416.01.T01:CDS 35.0%
!!! TGGTTTTATGATCTGTTGGT+CGG - Chr2:83691710-83691729 MsG0280011416.01.T01:CDS 35.0%
!!! TGTTGGATATTATTTTGGGG+CGG - Chr2:83687712-83687731 MsG0280011416.01.T01:intron 35.0%
!!! TTACCAGTGTTGACGTTTTA+GGG - Chr2:83686210-83686229 MsG0280011416.01.T01:CDS 35.0%
AAATTCCATCACAGTGACGA+CGG - Chr2:83685690-83685709 MsG0280011416.01.T01:three_prime_UTR 40.0%
AACAATCGTCTTCCCAACAA+CGG + Chr2:83685858-83685877 None:intergenic 40.0%
AACGTGAACAATTTGGACAG+TGG + Chr2:83689345-83689364 None:intergenic 40.0%
AATTCGAAGCTTCCGTTGTT+GGG - Chr2:83685843-83685862 MsG0280011416.01.T01:three_prime_UTR 40.0%
ACACCTATAAGTTCTCTCAG+TGG - Chr2:83686686-83686705 MsG0280011416.01.T01:intron 40.0%
ACAGAGCTCATTGAGATTTG+AGG + Chr2:83686642-83686661 None:intergenic 40.0%
ACATTGGCAACTTCAACTGA+TGG - Chr2:83687401-83687420 MsG0280011416.01.T01:intron 40.0%
ACCATCAACAAAAGCTTTGC+CGG + Chr2:83690330-83690349 None:intergenic 40.0%
ACTGGATTTAGTATCTGCTC+TGG - Chr2:83689797-83689816 MsG0280011416.01.T01:intron 40.0%
AGATACTTGTTCACGTCATC+AGG - Chr2:83689144-83689163 MsG0280011416.01.T01:intron 40.0%
AGTAAACTCGTCAAGTGTCA+TGG + Chr2:83688431-83688450 None:intergenic 40.0%
AGTAGCCTGTATGTTAGACT+TGG - Chr2:83686974-83686993 MsG0280011416.01.T01:intron 40.0%
AGTATAAAAGGTGAGGCCAA+TGG - Chr2:83686072-83686091 MsG0280011416.01.T01:CDS 40.0%
ATAACCACTCAAGGGGAAAA+CGG + Chr2:83690133-83690152 None:intergenic 40.0%
ATCTGTCCCAGATGTGTTAT+AGG - Chr2:83690878-83690897 MsG0280011416.01.T01:intron 40.0%
CAAGCTTAACGATACTCCAT+TGG + Chr2:83686091-83686110 None:intergenic 40.0%
CAGAGCTATATTTCAGGCAT+TGG - Chr2:83688750-83688769 MsG0280011416.01.T01:intron 40.0%
CATAGCATTCTGCTCATCAA+AGG + Chr2:83686812-83686831 None:intergenic 40.0%
CCGCAAATTGAATAACCTAC+AGG + Chr2:83690088-83690107 None:intergenic 40.0%
CGAAAAAGCAGTTGAAGTTG+GGG - Chr2:83690250-83690269 MsG0280011416.01.T01:intron 40.0%
CTCAGATGTAAAGTTATGGC+AGG - Chr2:83686500-83686519 MsG0280011416.01.T01:intron 40.0%
CTGGATTTAGTATCTGCTCT+GGG - Chr2:83689798-83689817 MsG0280011416.01.T01:intron 40.0%
CTGTAAATGACGAGGATGAA+TGG - Chr2:83686741-83686760 MsG0280011416.01.T01:intron 40.0%
GAAAGTGACGATGACAATGA+TGG - Chr2:83691419-83691438 MsG0280011416.01.T01:CDS 40.0%
GAATCCTTGCCTGGAAATAA+GGG + Chr2:83689921-83689940 None:intergenic 40.0%
GATGATGACAAAGTCATCGA+CGG - Chr2:83685806-83685825 MsG0280011416.01.T01:three_prime_UTR 40.0%
GCTTCTACTACCTAACACAT+TGG - Chr2:83687385-83687404 MsG0280011416.01.T01:intron 40.0%
GCTTGTAACTGTGTTAGGTA+TGG - Chr2:83686013-83686032 MsG0280011416.01.T01:CDS 40.0%
GGTCTATGTGATATCCTCAT+TGG - Chr2:83691814-83691833 MsG0280011416.01.T01:five_prime_UTR 40.0%
GGTTTAGTGTATGCTTGCTT+GGG - Chr2:83691835-83691854 MsG0280011416.01.T01:five_prime_UTR 40.0%
GTAAACTCGTCAAGTGTCAT+GGG + Chr2:83688430-83688449 None:intergenic 40.0%
GTAGCCTGTATGTTAGACTT+GGG - Chr2:83686975-83686994 MsG0280011416.01.T01:intron 40.0%
GTCACAATACATCTTTGAGC+AGG + Chr2:83688290-83688309 None:intergenic 40.0%
GTCGAAAAAGCAGTTGAAGT+TGG - Chr2:83690248-83690267 MsG0280011416.01.T01:intron 40.0%
GTCGATGACTTTGTCATCAT+CGG + Chr2:83685807-83685826 None:intergenic 40.0%
GTTGAAGTTGCCAATGTGTT+AGG + Chr2:83687398-83687417 None:intergenic 40.0%
TGAAAAGAAGAAACCAGGCT+CGG - Chr2:83691478-83691497 MsG0280011416.01.T01:intron 40.0%
TGAATCCTTGCCTGGAAATA+AGG + Chr2:83689922-83689941 None:intergenic 40.0%
TGGTTTAGTGTATGCTTGCT+TGG - Chr2:83691834-83691853 MsG0280011416.01.T01:five_prime_UTR 40.0%
TTCAAAAGGGTTTCCGAAAG+TGG - Chr2:83690837-83690856 MsG0280011416.01.T01:intron 40.0%
! AAAAGTTGGCTCAAGGAATG+AGG + Chr2:83687920-83687939 None:intergenic 40.0%
! AAATATAGCTCTGCAGAGGA+TGG + Chr2:83688743-83688762 None:intergenic 40.0%
! AGCTGTCTTTTACCGACAAA+AGG - Chr2:83688247-83688266 MsG0280011416.01.T01:intron 40.0%
! AGGATAGGCCAAGTCTTATA+AGG + Chr2:83687900-83687919 None:intergenic 40.0%
! AGGCAGGAGCTTCAAATTTT+TGG - Chr2:83689762-83689781 MsG0280011416.01.T01:intron 40.0%
! ATGAGAACATCAGCCACTTT+CGG + Chr2:83690853-83690872 None:intergenic 40.0%
! ATGAGGCCAATGCTACTTAA+CGG - Chr2:83689669-83689688 MsG0280011416.01.T01:intron 40.0%
! ATGGGATCAAAAAGTGCATC+AGG + Chr2:83688412-83688431 None:intergenic 40.0%
! ATTCCTTGAGCCAACTTTTG+GGG - Chr2:83687921-83687940 MsG0280011416.01.T01:intron 40.0%
! ATTGTCATCGTCACTTTCCT+CGG + Chr2:83691417-83691436 None:intergenic 40.0%
! ATTTCCCTTATTTCCAGGCA+AGG - Chr2:83689914-83689933 MsG0280011416.01.T01:intron 40.0%
! CATTCCTTGAGCCAACTTTT+GGG - Chr2:83687920-83687939 MsG0280011416.01.T01:intron 40.0%
! CCAGAGTGCCTTCATATTAT+TGG - Chr2:83690600-83690619 MsG0280011416.01.T01:intron 40.0%
! GATAGGCCAAGTCTTATAAG+GGG + Chr2:83687898-83687917 None:intergenic 40.0%
! GCTCATTGAGATTTGAGGTA+TGG + Chr2:83686637-83686656 None:intergenic 40.0%
! GGATAGGCCAAGTCTTATAA+GGG + Chr2:83687899-83687918 None:intergenic 40.0%
! GGTCTGAAATCTAGTTGGAA+CGG - Chr2:83689176-83689195 MsG0280011416.01.T01:intron 40.0%
! GTCTGAAATCTAGTTGGAAC+GGG - Chr2:83689177-83689196 MsG0280011416.01.T01:intron 40.0%
! TCATTCCTTGAGCCAACTTT+TGG - Chr2:83687919-83687938 MsG0280011416.01.T01:intron 40.0%
! TCTAGCAAATCGCCTTTTGT+CGG + Chr2:83688262-83688281 None:intergenic 40.0%
!! AGAGTACCGAATTGGAAAGA+GGG + Chr2:83685935-83685954 None:intergenic 40.0%
!! CCAATAATATGAAGGCACTC+TGG + Chr2:83690603-83690622 None:intergenic 40.0%
!! TCCTCACCACTTATTTTTCC+AGG + Chr2:83690179-83690198 None:intergenic 40.0%
!! TGTTAGGTAGTAGAAGCACT+TGG + Chr2:83687382-83687401 None:intergenic 40.0%
AAAAGAAGAAACCAGGCTCG+GGG - Chr2:83691480-83691499 MsG0280011416.01.T01:intron 45.0%
AACAATATCTCCAACGGGTG+TGG + Chr2:83687867-83687886 None:intergenic 45.0%
AAGTTGTGCCTCTGTGCTTA+GGG - Chr2:83688072-83688091 MsG0280011416.01.T01:intron 45.0%
AATTGGAAAGAGGGAAACGG+AGG + Chr2:83685926-83685945 None:intergenic 45.0%
ACAATATCTCCAACGGGTGT+GGG + Chr2:83687866-83687885 None:intergenic 45.0%
ACATTGTGTGATCAGAGTCC+TGG + Chr2:83687298-83687317 None:intergenic 45.0%
AGCACTTGGCTTAATCCAAC+AGG + Chr2:83687368-83687387 None:intergenic 45.0%
AGCATCATTGTTCCTCAGGA+AGG + Chr2:83689401-83689420 None:intergenic 45.0%
ATCAGGTCCAAGCTCAGATA+TGG + Chr2:83688395-83688414 None:intergenic 45.0%
ATCATGCGAATCTATGCTGC+AGG + Chr2:83691683-83691702 None:intergenic 45.0%
ATGGGGAGAGTGAACATGTT+TGG - Chr2:83687189-83687208 MsG0280011416.01.T01:CDS 45.0%
CAAATCAAAGAAGGGGACGA+AGG - Chr2:83691352-83691371 MsG0280011416.01.T01:intron 45.0%
CAACCCTAAAACGTCAACAC+TGG + Chr2:83686216-83686235 None:intergenic 45.0%
CACGTCATCAGGATTGTGAA+TGG - Chr2:83689155-83689174 MsG0280011416.01.T01:intron 45.0%
CATTAAAGAGGTAGGGATGC+TGG - Chr2:83689999-83690018 MsG0280011416.01.T01:intron 45.0%
CCAGAGTTGCAAAAGCTAAG+TGG - Chr2:83691224-83691243 MsG0280011416.01.T01:intron 45.0%
CCATCAACAAAAGCTTTGCC+GGG + Chr2:83690329-83690348 None:intergenic 45.0%
CCGAATTGGAAAGAGGGAAA+CGG + Chr2:83685929-83685948 None:intergenic 45.0%
CCGTTTCCCTCTTTCCAATT+CGG - Chr2:83685926-83685945 MsG0280011416.01.T01:CDS 45.0%
CCTCTGCAGAGCTATATTTC+AGG - Chr2:83688744-83688763 MsG0280011416.01.T01:intron 45.0%
CCTTTCCCGTTAAGTAGCAT+TGG + Chr2:83689678-83689697 None:intergenic 45.0%
CTAGCCCAAGTCTAACATAC+AGG + Chr2:83686982-83687001 None:intergenic 45.0%
CTATGGTGAAAGCTTGTGTC+AGG - Chr2:83687641-83687660 MsG0280011416.01.T01:intron 45.0%
GAAAAGAAGAAACCAGGCTC+GGG - Chr2:83691479-83691498 MsG0280011416.01.T01:intron 45.0%
GAATTCGAAGCTTCCGTTGT+TGG - Chr2:83685842-83685861 MsG0280011416.01.T01:three_prime_UTR 45.0%
GAGTATAACGTGTGAGGTAG+AGG + Chr2:83686288-83686307 None:intergenic 45.0%
GCCTGGAAAAATAAGTGGTG+AGG - Chr2:83690175-83690194 MsG0280011416.01.T01:intron 45.0%
GCTAACTCAACCCCAAAAGT+TGG + Chr2:83687934-83687953 None:intergenic 45.0%
GTAACAGAGCTTGACTCAAC+AGG + Chr2:83690766-83690785 None:intergenic 45.0%
GTAACCCGTGAGTTTCAAAC+TGG + Chr2:83690742-83690761 None:intergenic 45.0%
GTAACTGTGTTAGGTATGGC+TGG - Chr2:83686017-83686036 MsG0280011416.01.T01:CDS 45.0%
TACAAGCCCAAAGACACAAG+TGG + Chr2:83686842-83686861 None:intergenic 45.0%
TCAGGTCCAAGCTCAGATAT+GGG + Chr2:83688394-83688413 None:intergenic 45.0%
TCGCACCATGAAATCACGTA+TGG + Chr2:83687052-83687071 None:intergenic 45.0%
TTGGCTCAAGGAATGAGGAT+AGG + Chr2:83687915-83687934 None:intergenic 45.0%
! ACAGAGCATCATTGTTCCTC+AGG + Chr2:83689405-83689424 None:intergenic 45.0%
! ACGATTGATTTCATCACCGC+AGG - Chr2:83691095-83691114 MsG0280011416.01.T01:intron 45.0%
! ATTGATTTCATCACCGCAGG+TGG - Chr2:83691098-83691117 MsG0280011416.01.T01:intron 45.0%
! ATTTCCTTCTGTGTAGTGGG+TGG - Chr2:83686579-83686598 MsG0280011416.01.T01:intron 45.0%
! CCAATGCTACTTAACGGGAA+AGG - Chr2:83689675-83689694 MsG0280011416.01.T01:intron 45.0%
! CCTGAAATATAGCTCTGCAG+AGG + Chr2:83688747-83688766 None:intergenic 45.0%
! GATGACAATGATGGTGATGC+TGG - Chr2:83691428-83691447 MsG0280011416.01.T01:CDS 45.0%
! TGAGGCCAATGCTACTTAAC+GGG - Chr2:83689670-83689689 MsG0280011416.01.T01:intron 45.0%
!! ACGGGAAAGGTTTTTAGAGG+TGG - Chr2:83689688-83689707 MsG0280011416.01.T01:intron 45.0%
!! AGAGAGAGAGAGTACCGAAT+TGG + Chr2:83685943-83685962 None:intergenic 45.0%
!! CCACTTAGCTTTTGCAACTC+TGG + Chr2:83691227-83691246 None:intergenic 45.0%
!! CGTGTTGGTGTCCTACATTT+TGG + Chr2:83687119-83687138 None:intergenic 45.0%
!! CTCTGCTCTAGAACAACAGA+AGG - Chr2:83691642-83691661 MsG0280011416.01.T01:CDS 45.0%
!! CTGAAGTGGACTATTTGCTG+TGG - Chr2:83686911-83686930 MsG0280011416.01.T01:intron 45.0%
!! CTGTTGTTCTAGAGCAGAGT+AGG + Chr2:83691641-83691660 None:intergenic 45.0%
!! GAAGTGCTGTACCAAGTAAG+CGG - Chr2:83688789-83688808 MsG0280011416.01.T01:intron 45.0%
!! GAGAGTACCGAATTGGAAAG+AGG + Chr2:83685936-83685955 None:intergenic 45.0%
!! GCTCTAGAACAACAGAAGGA+TGG - Chr2:83691646-83691665 MsG0280011416.01.T01:CDS 45.0%
!! GCTGGTGCTGTATACATCAA+GGG - Chr2:83686035-83686054 MsG0280011416.01.T01:CDS 45.0%
!! GGAAAGGTTTTTAGAGGTGG+TGG - Chr2:83689691-83689710 MsG0280011416.01.T01:intron 45.0%
!! TTCTTTGAGGCTTTCCCTCT+GGG + Chr2:83691278-83691297 None:intergenic 45.0%
!! TTTCTTTGAGGCTTTCCCTC+TGG + Chr2:83691279-83691298 None:intergenic 45.0%
!!! TGACGTTTTAGGGTTGTGTC+TGG - Chr2:83686220-83686239 MsG0280011416.01.T01:CDS 45.0%
!!! AAAAATATTTTTAATTTGTT+GGG + Chr2:83691865-83691884 None:intergenic 5.0%
!!! TAAAAATATTTTTAATTTGT+TGG + Chr2:83691866-83691885 None:intergenic 5.0%
AAAGAAACTGGCAAGCCCAG+AGG - Chr2:83691260-83691279 MsG0280011416.01.T01:intron 50.0%
AAGAAACTGGCAAGCCCAGA+GGG - Chr2:83691261-83691280 MsG0280011416.01.T01:intron 50.0%
ACATTGCTGCAGCTAGACGA+TGG - Chr2:83688219-83688238 MsG0280011416.01.T01:intron 50.0%
AGACGATTGTTGCAGCTCGT+CGG - Chr2:83685867-83685886 MsG0280011416.01.T01:three_prime_UTR 50.0%
AGTTGTGCCTCTGTGCTTAG+GGG - Chr2:83688073-83688092 MsG0280011416.01.T01:intron 50.0%
ATCATCGGCGACGATGCATT+TGG + Chr2:83685792-83685811 None:intergenic 50.0%
ATTGTTGCAGCTCGTCGGAA+GGG - Chr2:83685872-83685891 MsG0280011416.01.T01:three_prime_UTR 50.0%
CAGATAGCTTCTAGCCTGTC+AGG - Chr2:83689949-83689968 MsG0280011416.01.T01:intron 50.0%
CAGGTCTGCTGTAAATGACG+AGG - Chr2:83686733-83686752 MsG0280011416.01.T01:intron 50.0%
CATTCCCGTGAAAAGAAGCC+CGG - Chr2:83690308-83690327 MsG0280011416.01.T01:intron 50.0%
GAAGTTGTGCCTCTGTGCTT+AGG - Chr2:83688071-83688090 MsG0280011416.01.T01:intron 50.0%
GACAAATCCCCTAAGCACAG+AGG + Chr2:83688083-83688102 None:intergenic 50.0%
GTCCAATGTTTGACGCGTGT+CGG - Chr2:83686139-83686158 MsG0280011416.01.T01:CDS 50.0%
GTCGGAAGGGGAAGAATATG+TGG - Chr2:83685885-83685904 MsG0280011416.01.T01:exon 50.0%
TCCAGGCAAGGATTCATCCA+CGG - Chr2:83689926-83689945 MsG0280011416.01.T01:intron 50.0%
TGTACCACCCACTACACAGA+AGG + Chr2:83686586-83686605 None:intergenic 50.0%
TTGAGCAGCTTTCTCCTGAC+AGG + Chr2:83689966-83689985 None:intergenic 50.0%
TTGTGTCTGTGTGTGGGCAA+TGG - Chr2:83689296-83689315 MsG0280011416.01.T01:intron 50.0%
TTTCGATGGGGGAAAAAGCC+TGG - Chr2:83690158-83690177 MsG0280011416.01.T01:intron 50.0%
! CAACCCCAAAAGTTGGCTCA+AGG + Chr2:83687927-83687946 None:intergenic 50.0%
! CCCGGCAAAGCTTTTGTTGA+TGG - Chr2:83690326-83690345 MsG0280011416.01.T01:intron 50.0%
! CTTTGCCGGGCTTCTTTTCA+CGG + Chr2:83690316-83690335 None:intergenic 50.0%
! TTTGCCGGGCTTCTTTTCAC+GGG + Chr2:83690315-83690334 None:intergenic 50.0%
!! GATATGGGAGGCACTGATGT+TGG + Chr2:83688379-83688398 None:intergenic 50.0%
!! GGCTGGTGCTGTATACATCA+AGG - Chr2:83686034-83686053 MsG0280011416.01.T01:CDS 50.0%
AACCAGGCTCGGGGACTAAT+AGG - Chr2:83691489-83691508 MsG0280011416.01.T01:intron 55.0%
AGGCTAGAAGCTATCTGCCG+TGG + Chr2:83689946-83689965 None:intergenic 55.0%
ATTTCATCACCGCAGGTGGC+AGG - Chr2:83691102-83691121 MsG0280011416.01.T01:intron 55.0%
CACCGACACGCGTCAAACAT+TGG + Chr2:83686144-83686163 None:intergenic 55.0%
CGGTGGAAGAGAACTGTGTC+GGG - Chr2:83685756-83685775 MsG0280011416.01.T01:three_prime_UTR 55.0%
GATTGTTGCAGCTCGTCGGA+AGG - Chr2:83685871-83685890 MsG0280011416.01.T01:three_prime_UTR 55.0%
GCAGAGTAGGAACACAGCCA+TGG + Chr2:83691628-83691647 None:intergenic 55.0%
GCGGTGGAAGAGAACTGTGT+CGG - Chr2:83685755-83685774 MsG0280011416.01.T01:three_prime_UTR 55.0%
GCTGCAGCTAGACGATGGTT+TGG - Chr2:83688224-83688243 MsG0280011416.01.T01:intron 55.0%
GGTCCAAGCTCAGATATGGG+AGG + Chr2:83688391-83688410 None:intergenic 55.0%
GTGCCTCCCATATCTGAGCT+TGG - Chr2:83688385-83688404 MsG0280011416.01.T01:intron 55.0%
GTTAGGCTGTCACCTTCCTG+AGG - Chr2:83689386-83689405 MsG0280011416.01.T01:intron 55.0%
TTCCTATTAGTCCCCGAGCC+TGG + Chr2:83691494-83691513 None:intergenic 55.0%
TTGTTGCAGCTCGTCGGAAG+GGG - Chr2:83685873-83685892 MsG0280011416.01.T01:three_prime_UTR 55.0%
TTTCATCACCGCAGGTGGCA+GGG - Chr2:83691103-83691122 MsG0280011416.01.T01:intron 55.0%
!! GTAGCCGTTTTCCCCTTGAG+TGG - Chr2:83690126-83690145 MsG0280011416.01.T01:intron 55.0%
!! TGACGGCGCTGACGAGAATT+TGG - Chr2:83691322-83691341 MsG0280011416.01.T01:intron 55.0%
ATGGCATACCCTGCCACCTG+CGG + Chr2:83691114-83691133 None:intergenic 60.0%
CGTTGAGATCCCACACCCGT+TGG - Chr2:83687854-83687873 MsG0280011416.01.T01:intron 60.0%
CTTCTTGCCGCCTCTACCTC+CGG + Chr2:83685734-83685753 None:intergenic 60.0%
GAGCACAATGCCGGAGCTAC+CGG - Chr2:83685712-83685731 MsG0280011416.01.T01:three_prime_UTR 60.0%
GCCGTGGATGAATCCTTGCC+TGG + Chr2:83689930-83689949 None:intergenic 60.0%
GGTAGAGGCGGCAAGAAGAG+CGG - Chr2:83685736-83685755 MsG0280011416.01.T01:three_prime_UTR 60.0%
GTGACGACGGAGCACAATGC+CGG - Chr2:83685703-83685722 MsG0280011416.01.T01:three_prime_UTR 60.0%
GTGCTCCGTCGTCACTGTGA+TGG + Chr2:83685698-83685717 None:intergenic 60.0%
AGAGGCGGCAAGAAGAGCGG+TGG - Chr2:83685739-83685758 MsG0280011416.01.T01:three_prime_UTR 65.0%
CACAATGCCGGAGCTACCGG+AGG - Chr2:83685715-83685734 MsG0280011416.01.T01:three_prime_UTR 65.0%
GCCTCTACCTCCGGTAGCTC+CGG + Chr2:83685725-83685744 None:intergenic 65.0%
GGAGCTACCGGAGGTAGAGG+CGG - Chr2:83685724-83685743 MsG0280011416.01.T01:three_prime_UTR 65.0%
GCCGGAGCTACCGGAGGTAG+AGG - Chr2:83685721-83685740 MsG0280011416.01.T01:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 83685608 83691888 83685608 ID=MsG0280011416.01;Name=MsG0280011416.01
Chr2 mRNA 83685608 83691888 83685608 ID=MsG0280011416.01.T01;Parent=MsG0280011416.01;Name=MsG0280011416.01.T01;_AED=0.43;_eAED=0.43;_QI=111|0.75|0.88|1|1|1|9|293|385
Chr2 exon 83685608 83686287 83685608 ID=MsG0280011416.01.T01:exon:3151;Parent=MsG0280011416.01.T01
Chr2 exon 83686372 83686445 83686372 ID=MsG0280011416.01.T01:exon:3150;Parent=MsG0280011416.01.T01
Chr2 exon 83687149 83687251 83687149 ID=MsG0280011416.01.T01:exon:3149;Parent=MsG0280011416.01.T01
Chr2 exon 83687488 83687565 83687488 ID=MsG0280011416.01.T01:exon:3148;Parent=MsG0280011416.01.T01
Chr2 exon 83688693 83688743 83688693 ID=MsG0280011416.01.T01:exon:3147;Parent=MsG0280011416.01.T01
Chr2 exon 83688995 83689120 83688995 ID=MsG0280011416.01.T01:exon:3146;Parent=MsG0280011416.01.T01
Chr2 exon 83690703 83690760 83690703 ID=MsG0280011416.01.T01:exon:3145;Parent=MsG0280011416.01.T01
Chr2 exon 83691415 83691466 83691415 ID=MsG0280011416.01.T01:exon:3144;Parent=MsG0280011416.01.T01
Chr2 exon 83691549 83691888 83691549 ID=MsG0280011416.01.T01:exon:3143;Parent=MsG0280011416.01.T01
Chr2 five_prime_UTR 83691778 83691888 83691778 ID=MsG0280011416.01.T01:five_prime_utr;Parent=MsG0280011416.01.T01
Chr2 CDS 83691549 83691777 83691549 ID=MsG0280011416.01.T01:cds;Parent=MsG0280011416.01.T01
Chr2 CDS 83691415 83691466 83691415 ID=MsG0280011416.01.T01:cds;Parent=MsG0280011416.01.T01
Chr2 CDS 83690703 83690760 83690703 ID=MsG0280011416.01.T01:cds;Parent=MsG0280011416.01.T01
Chr2 CDS 83688995 83689120 83688995 ID=MsG0280011416.01.T01:cds;Parent=MsG0280011416.01.T01
Chr2 CDS 83688693 83688743 83688693 ID=MsG0280011416.01.T01:cds;Parent=MsG0280011416.01.T01
Chr2 CDS 83687488 83687565 83687488 ID=MsG0280011416.01.T01:cds;Parent=MsG0280011416.01.T01
Chr2 CDS 83687149 83687251 83687149 ID=MsG0280011416.01.T01:cds;Parent=MsG0280011416.01.T01
Chr2 CDS 83686372 83686445 83686372 ID=MsG0280011416.01.T01:cds;Parent=MsG0280011416.01.T01
Chr2 CDS 83685901 83686287 83685901 ID=MsG0280011416.01.T01:cds;Parent=MsG0280011416.01.T01
Chr2 three_prime_UTR 83685608 83685900 83685608 ID=MsG0280011416.01.T01:three_prime_utr;Parent=MsG0280011416.01.T01
Gene Sequence

>MsG0280011416.01.T01

ATGCCGGAGCTACCGGAGGTAGAGGCGGCAAGAAGAGCGGTGGAAGAGAACTGTGTCGGGAAGAAGATAACCAAATGCATCGTCGCCGATGATGACAAAGTCATCGACGGTGTCTCTCGCGAAGAATTCGAAGCTTCCGTTGTTGGGAAGACGATTGTTGCAGCTCGTCGGAAGGGGAAGAATATGTGGCTTCAGCTTGATTCTCCTCCGTTTCCCTCTTTCCAATTCGGTATGGCTGGTGCTGTATACATCAAGGGCGTTGCTGTAACAAAGTATAAAAGGTCTGCTGTAAATGACGAGGATGAATGGCCTTCCAAGTATTCAAAGTTTTTTATTCAGCCAACATCAGTGCCTCCCATATCTGAGCTTGGACCTGATGCACTTTTTGATCCCATGACACTTGACGAGTTTACTGAGCGTTTGCACAAGAAGAAAACTGAAATCAAGGCTTTATTACTAGATCAAAGCTATATTTCAGGCATTGGAAATTGGGTTGCAGATGAAGTGCTGTACCAAGCAAGGATTCATCCACGGCAGATAGCTTCTAGCCTGTCAGGAGAAAGCTGCTCAACTCTATATAAGTGCATTAAAGAGGTTGTCGAAAAAGCAGTTGAAGTTGGGGCAGATAGTAGTCAATATCCCACTAATTGGATATTTCATTCCCGTGAAAAGAAGCCCGGCAAAGCTTTTGTTGATGTGCCAAATCCAAACATTTATAATTTTCATGTGATTGCAGGGAAAACGATTGATTTCATCACCGCAGGTGGCAGGACAACTGCTTACGTGCCAGAGTTGCAAAAGCTAAGTGGATCACAAGTGTTAAAAGAAACTGGCAAGCCCAGAGGGAAAGCCTCAAAGAAAACAAGTGTAGATGATGATAACAATGACGGCGCTGACGAGAATTTGGAAAGTCTCAAATCAAAGAAGGGGACGAAGGCAGAAGCTAAAGCTAAGAAACCTTCAAAAAGAAAAAAGACCGAGGAAAGTGACGATGACAATGATGGTGATGCTGGTACTGATGATGATGATAGCGATCAAGTTGAAAAGAAGAAACCAGGCTCGGGGACTAATAGGAAACAGACTAAGGGAGAGAAGCAATCAAAGAAACGTGTTCAAGGCAATCAAAGTAGTAGAAGTACTAGGAGTAAAGCTAAGTAG

Protein sequence

>MsG0280011416.01.T01

MPELPEVEAARRAVEENCVGKKITKCIVADDDKVIDGVSREEFEASVVGKTIVAARRKGKNMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDEDEWPSKYSKFFIQPTSVPPISELGPDALFDPMTLDEFTERLHKKKTEIKALLLDQSYISGIGNWVADEVLYQARIHPRQIASSLSGESCSTLYKCIKEVVEKAVEVGADSSQYPTNWIFHSREKKPGKAFVDVPNPNIYNFHVIAGKTIDFITAGGRTTAYVPELQKLSGSQVLKETGKPRGKASKKTSVDDDNNDGADENLESLKSKKGTKAEAKAKKPSKRKKTEESDDDNDGDAGTDDDDSDQVEKKKPGSGTNRKQTKGEKQSKKRVQGNQSSRSTRSKAK*