AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001626.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001626.01.T01 MTR_1g040175 85.033 461 65 2 1 460 1 458 0.0 814
MsG0180001626.01.T01 MTR_1g040320 86.985 461 23 2 1 460 1 425 0.0 809
MsG0180001626.01.T01 MTR_1g040215 76.356 461 108 1 1 460 1 461 0.0 741
MsG0180001626.01.T01 MTR_1g040195 72.000 450 101 3 1 450 1 425 0.0 664
MsG0180001626.01.T01 MTR_1g040315 66.000 450 109 4 1 450 1 406 0.0 587
MsG0180001626.01.T01 MTR_7g114560 56.376 447 188 6 5 448 6 448 0.0 521
MsG0180001626.01.T01 MTR_7g114550 54.725 455 199 6 2 453 3 453 0.0 520
MsG0180001626.01.T01 MTR_7g114520 55.507 454 183 7 5 448 7 451 0.0 514
MsG0180001626.01.T01 MTR_5g076700 54.585 458 200 6 5 458 6 459 8.10e-180 511
MsG0180001626.01.T01 MTR_7g114470 55.556 450 189 7 5 448 7 451 5.74e-177 504
MsG0180001626.01.T01 MTR_1g081660 57.859 439 180 5 4 440 13 448 2.02e-176 502
MsG0180001626.01.T01 MTR_7g114490 54.292 431 191 5 5 432 6 433 2.81e-169 486
MsG0180001626.01.T01 MTR_0042s0190 73.401 297 78 1 165 460 1 297 1.95e-161 458
MsG0180001626.01.T01 MTR_0042s0190 73.707 232 60 1 230 460 1 232 9.07e-122 355
MsG0180001626.01.T01 MTR_7g114510 51.125 311 134 6 147 448 8 309 5.55e-101 305
MsG0180001626.01.T01 MTR_0502s0010 57.202 243 96 4 100 338 1 239 1.49e-95 288
MsG0180001626.01.T01 MTR_3g035000 61.261 222 59 3 199 419 43 238 1.83e-86 267
MsG0180001626.01.T01 MTR_0042s0230 84.354 147 23 0 1 147 1 147 5.31e-86 260
MsG0180001626.01.T01 MTR_3g098980 32.634 429 270 10 9 432 14 428 1.51e-76 246
MsG0180001626.01.T01 MTR_7g114420 44.251 287 127 5 165 448 1 257 5.95e-75 236
MsG0180001626.01.T01 MTR_8g096530 32.184 435 275 11 1 430 1 420 7.06e-73 236
MsG0180001626.01.T01 MTR_7g027175 32.311 424 267 11 13 430 20 429 1.32e-72 236
MsG0180001626.01.T01 MTR_8g039950 79.688 128 26 0 1 128 1 128 7.18e-71 221
MsG0180001626.01.T01 MTR_7g114500 59.333 150 61 0 2 151 3 152 1.09e-63 203
MsG0180001626.01.T01 MTR_3g051790 62.329 146 55 0 2 147 6 151 2.48e-59 192
MsG0180001626.01.T01 MTR_3g112180 33.419 389 231 12 17 391 20 394 1.25e-55 192
MsG0180001626.01.T01 MTR_4g007540 30.516 426 270 12 9 420 3 416 4.89e-54 187
MsG0180001626.01.T01 MTR_1g053315 30.385 441 287 12 17 440 26 463 8.90e-54 187
MsG0180001626.01.T01 MTR_8g075610 29.742 427 254 11 16 420 1 403 1.71e-52 182
MsG0180001626.01.T01 MTR_2g105330 28.864 440 287 12 9 436 3 428 8.12e-51 178
MsG0180001626.01.T01 MTR_4g055170 28.387 465 304 12 3 446 6 462 1.51e-50 178
MsG0180001626.01.T01 MTR_2g064495 28.864 440 287 12 9 436 3 428 4.23e-50 176
MsG0180001626.01.T01 MTR_3g071320 31.172 401 248 11 9 391 5 395 2.47e-46 166
MsG0180001626.01.T01 MTR_7g110610 29.327 416 225 13 5 411 1 356 6.80e-44 159
MsG0180001626.01.T01 MTR_7g084940 28.354 395 266 9 5 391 12 397 2.04e-43 159
MsG0180001626.01.T01 MTR_7g086000 30.097 412 229 17 17 385 12 407 1.33e-40 151
MsG0180001626.01.T01 MTR_3g465990 28.850 461 285 15 9 439 10 457 1.98e-40 150
MsG0180001626.01.T01 MTR_7g084910 27.960 397 245 11 8 391 16 384 7.29e-40 149
MsG0180001626.01.T01 MTR_3g465930 27.312 465 295 14 7 439 8 461 2.69e-38 145
MsG0180001626.01.T01 MTR_2g015430 29.897 388 258 10 9 387 2 384 2.29e-37 142
MsG0180001626.01.T01 MTR_3g465980 28.633 461 286 16 9 439 10 457 2.42e-37 142
MsG0180001626.01.T01 MTR_7g085930 27.358 424 260 15 9 392 6 421 3.15e-37 142
MsG0180001626.01.T01 MTR_6g053810 25.107 466 312 11 3 439 5 462 3.30e-37 142
MsG0180001626.01.T01 MTR_7g056087 27.416 445 275 16 16 434 11 433 5.55e-37 141
MsG0180001626.01.T01 MTR_3g026950 26.961 408 258 10 17 392 10 409 5.75e-37 141
MsG0180001626.01.T01 MTR_7g085990 27.039 466 284 18 9 434 2 451 5.97e-37 141
MsG0180001626.01.T01 MTR_3g465910 29.971 347 218 9 7 337 8 345 1.46e-36 141
MsG0180001626.01.T01 MTR_4g088765 79.452 73 15 0 1 73 1 73 2.01e-33 122
MsG0180001626.01.T01 MTR_4g127650 26.329 414 268 12 8 392 9 414 4.69e-33 130
MsG0180001626.01.T01 MTR_3g465880 27.021 470 293 15 7 439 8 464 1.93e-32 129
MsG0180001626.01.T01 MTR_3g465950 29.395 347 223 10 7 337 8 348 8.05e-32 127
MsG0180001626.01.T01 MTR_3g049150 26.733 404 256 12 17 390 10 403 8.75e-31 124
MsG0180001626.01.T01 MTR_5g090830 26.980 404 227 14 61 427 63 435 4.38e-30 122
MsG0180001626.01.T01 MTR_4g013050 24.834 451 240 16 17 430 12 400 5.72e-30 121
MsG0180001626.01.T01 MTR_4g097090 25.977 435 278 14 17 420 17 438 6.32e-30 121
MsG0180001626.01.T01 MTR_5g090810 25.217 460 273 15 7 427 8 435 2.97e-29 120
MsG0180001626.01.T01 MTR_5g090880 26.000 400 237 14 61 427 64 437 8.60e-27 112
MsG0180001626.01.T01 MTR_3g465870 28.716 296 186 10 5 283 8 295 1.27e-25 108
MsG0180001626.01.T01 MTR_3g450710 25.926 432 233 17 64 446 65 458 1.55e-25 109
MsG0180001626.01.T01 MTR_1g094790 26.328 433 243 18 15 404 9 408 6.66e-24 104
MsG0180001626.01.T01 MTR_5g084870 23.529 391 260 13 15 388 9 377 1.52e-23 103
MsG0180001626.01.T01 MTR_3g450690 25.063 395 227 14 64 422 72 433 7.35e-23 101
MsG0180001626.01.T01 MTR_3g086020 24.433 397 241 15 15 390 11 369 1.88e-22 99.4
MsG0180001626.01.T01 MTR_4g094828 25.245 408 262 16 51 432 49 439 8.81e-22 97.8
MsG0180001626.01.T01 MTR_0190s0020 25.123 406 262 16 48 432 47 431 9.83e-22 97.8
MsG0180001626.01.T01 MTR_8g467580 24.878 410 275 15 15 405 9 404 3.28e-21 96.3
MsG0180001626.01.T01 MTR_4g094842 25.464 377 246 14 48 399 46 412 3.32e-21 96.3
MsG0180001626.01.T01 MTR_3g101960 28.338 367 226 16 61 402 65 419 9.90e-21 94.7
MsG0180001626.01.T01 MTR_5g084850 22.051 390 266 12 15 388 9 376 1.94e-20 94.0
MsG0180001626.01.T01 MTR_3g101930 26.997 363 221 14 64 397 70 417 2.68e-20 93.6
MsG0180001626.01.T01 MTR_3g101900 25.610 410 256 16 61 445 63 448 3.71e-20 93.2
MsG0180001626.01.T01 MTR_8g079710 25.496 353 227 14 59 387 54 394 4.41e-20 92.8
MsG0180001626.01.T01 MTR_3g101970 28.729 362 217 15 61 402 66 406 1.20e-19 91.3
MsG0180001626.01.T01 MTR_8g041770 25.137 366 238 14 49 395 49 397 1.30e-19 91.3
MsG0180001626.01.T01 MTR_7g026860 26.173 405 260 18 48 432 42 427 2.17e-19 90.5
MsG0180001626.01.T01 MTR_4g094835 24.570 407 267 15 46 432 49 435 2.30e-19 90.5
MsG0180001626.01.T01 MTR_8g079970 22.333 403 256 11 15 388 9 383 2.33e-19 90.5
MsG0180001626.01.T01 MTR_8g079950 22.475 396 264 12 15 388 9 383 6.74e-19 89.4
MsG0180001626.01.T01 MTR_4g022720 25.410 366 246 14 51 399 44 399 7.49e-19 89.0
MsG0180001626.01.T01 MTR_4g022800 25.564 399 252 17 23 395 25 404 1.28e-18 88.2
MsG0180001626.01.T01 MTR_4g094838 22.973 370 236 12 53 399 53 396 9.42e-18 85.5
MsG0180001626.01.T01 MTR_5g084900 21.257 334 218 10 61 388 6 300 1.40e-17 84.3
MsG0180001626.01.T01 MTR_7g114417 67.308 52 16 1 89 139 29 80 1.95e-17 77.4
MsG0180001626.01.T01 MTR_4g094832 27.324 355 222 16 94 432 85 419 2.38e-17 84.3
MsG0180001626.01.T01 MTR_3g102020 25.936 374 226 16 61 402 66 420 1.10e-16 82.4
MsG0180001626.01.T01 MTR_4g022670 24.157 356 245 13 51 387 44 393 2.10e-16 81.6
MsG0180001626.01.T01 MTR_3g102010 26.596 376 225 15 61 402 62 420 5.41e-16 80.5
MsG0180001626.01.T01 MTR_4g022825 26.161 409 242 19 57 432 48 429 1.32e-15 79.0
MsG0180001626.01.T01 MTR_3g051820 47.312 93 45 3 367 458 1 90 7.00e-15 70.5
MsG0180001626.01.T01 MTR_6g045553 23.698 384 216 15 58 385 60 422 1.04e-14 76.6
MsG0180001626.01.T01 MTR_4g022760 28.727 275 176 11 64 323 55 324 5.49e-14 73.9
MsG0180001626.01.T01 MTR_2g036780 23.846 390 239 12 72 437 74 429 1.15e-13 73.2
MsG0180001626.01.T01 MTR_2g007880 23.059 425 251 18 6 389 14 403 2.25e-13 72.4
MsG0180001626.01.T01 MTR_3g026310 24.863 366 231 17 64 395 55 410 8.96e-13 70.5
MsG0180001626.01.T01 MTR_3g049140 31.333 150 84 5 257 390 54 200 1.29e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001626.01.T01 AT5G17540 54.390 467 200 9 1 460 1 461 8.32e-175 498
MsG0180001626.01.T01 AT3G03480 51.802 444 199 9 5 441 15 450 5.84e-152 440
MsG0180001626.01.T01 AT5G63560 32.952 437 267 11 1 430 1 418 2.16e-79 253
MsG0180001626.01.T01 AT5G41040 33.907 407 246 11 7 404 31 423 7.30e-78 250
MsG0180001626.01.T01 AT5G41040 33.907 407 246 11 7 404 15 407 8.25e-78 249
MsG0180001626.01.T01 AT3G48720 30.575 435 284 10 1 430 1 422 8.38e-75 241
MsG0180001626.01.T01 AT5G48930 30.269 446 277 13 8 436 2 430 1.19e-53 186
MsG0180001626.01.T01 AT1G27620 29.797 443 288 10 10 446 10 435 1.17e-52 183
MsG0180001626.01.T01 AT3G62160 30.330 455 271 16 5 445 1 423 5.61e-50 176
MsG0180001626.01.T01 AT1G03390 30.964 394 247 12 14 391 27 411 1.69e-48 172
MsG0180001626.01.T01 AT5G57840 28.502 414 259 12 8 397 2 402 2.44e-47 169
MsG0180001626.01.T01 AT1G28680 28.508 449 296 14 13 444 8 448 5.41e-47 168
MsG0180001626.01.T01 AT2G40230 30.858 431 262 15 9 421 5 417 2.37e-45 164
MsG0180001626.01.T01 AT1G65450 29.759 457 275 15 7 440 16 449 7.48e-45 162
MsG0180001626.01.T01 AT2G19070 29.024 410 255 13 12 392 7 409 8.34e-44 160
MsG0180001626.01.T01 AT1G28680 29.700 367 242 11 13 368 8 369 1.59e-42 155
MsG0180001626.01.T01 AT3G47170 27.061 473 296 16 4 440 7 466 9.82e-39 146
MsG0180001626.01.T01 AT5G07080 29.280 403 248 12 9 387 14 403 4.51e-38 144
MsG0180001626.01.T01 AT2G23510 28.205 468 285 17 1 439 5 450 2.17e-37 142
MsG0180001626.01.T01 AT2G25150 27.473 455 295 16 9 441 13 454 1.01e-34 135
MsG0180001626.01.T01 AT1G32910 27.901 405 251 14 62 441 63 451 5.99e-33 130
MsG0180001626.01.T01 AT1G78990 27.390 387 234 13 62 431 65 421 7.44e-33 130
MsG0180001626.01.T01 AT1G31490 28.075 374 224 13 38 389 36 386 5.55e-28 115
MsG0180001626.01.T01 AT1G24420 26.750 400 237 15 15 388 11 380 4.15e-25 107
MsG0180001626.01.T01 AT1G24420 26.750 400 237 15 15 388 11 380 4.15e-25 107
MsG0180001626.01.T01 AT4G31910 27.342 395 241 14 25 384 24 407 5.94e-24 104
MsG0180001626.01.T01 AT5G23970 26.174 447 268 16 8 431 2 409 3.90e-23 101
MsG0180001626.01.T01 AT5G07850 27.424 361 232 13 64 402 70 422 7.75e-23 101
MsG0180001626.01.T01 AT3G26040 24.000 400 255 14 15 390 9 383 3.54e-22 99.0
MsG0180001626.01.T01 AT5G07860 26.131 398 242 12 64 437 72 441 8.75e-22 97.8
MsG0180001626.01.T01 AT5G16410 24.929 353 222 13 62 390 89 422 1.93e-21 97.1
MsG0180001626.01.T01 AT5G38130 26.551 403 245 17 23 399 48 425 2.30e-21 96.7
MsG0180001626.01.T01 AT1G24430 23.737 396 261 12 15 393 11 382 2.97e-20 93.2
MsG0180001626.01.T01 AT5G42830 27.098 417 253 15 21 402 18 418 3.80e-20 93.2
MsG0180001626.01.T01 AT4G15390 23.729 413 264 16 3 388 2 390 1.05e-19 91.7
MsG0180001626.01.T01 AT4G15390 23.729 413 264 16 3 388 2 390 1.05e-19 91.7
MsG0180001626.01.T01 AT3G50280 25.419 358 236 14 64 399 59 407 1.12e-19 91.7
MsG0180001626.01.T01 AT1G65450 27.303 304 180 11 158 440 2 285 3.19e-19 88.2
MsG0180001626.01.T01 AT3G50270 25.419 358 238 11 64 399 62 412 1.57e-18 88.2
MsG0180001626.01.T01 AT5G47980 25.751 466 277 21 15 447 11 440 1.81e-18 87.8
MsG0180001626.01.T01 AT5G67160 24.318 440 303 14 13 437 2 426 5.34e-18 86.3
MsG0180001626.01.T01 AT3G30280 22.983 409 263 16 7 388 4 387 3.78e-17 84.0
MsG0180001626.01.T01 AT5G23940 25.248 404 262 15 61 440 62 449 7.63e-17 83.2
MsG0180001626.01.T01 AT2G39980 25.436 401 246 12 53 402 51 449 2.94e-16 81.3
MsG0180001626.01.T01 AT3G29670 23.851 348 230 15 64 387 66 402 7.42e-13 70.9
MsG0180001626.01.T01 AT3G23840 23.529 289 177 9 80 353 81 340 1.06e-12 70.1
MsG0180001626.01.T01 AT5G47950 24.679 312 196 12 7 309 4 285 2.80e-12 68.9
MsG0180001626.01.T01 AT1G65450 33.333 147 93 4 7 151 16 159 2.84e-12 65.1
MsG0180001626.01.T01 AT3G29635 23.988 346 226 14 67 385 70 405 2.57e-11 65.9

Find 108 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTTACACGTGCTGGATTT+AGG 0.146152 1:-24296314 MsG0180001626.01.T01:CDS
TGCAGCAATGATTTCAAAAT+TGG 0.167630 1:+24296650 None:intergenic
GGGTCTTTCCCTGCCATATT+TGG 0.199762 1:+24298538 None:intergenic
TTTGAAGGTGTTATCAATTC+AGG 0.202630 1:+24298655 None:intergenic
TCTCCTTTATCATTTGTAAA+AGG 0.217002 1:+24296201 None:intergenic
GGATTTAGGGATGTTGATTT+TGG 0.219143 1:-24296300 MsG0180001626.01.T01:CDS
GCATTACCATAGTAACTATT+TGG 0.237009 1:+24296522 None:intergenic
GATATTACTCTTAAACAATT+TGG 0.242406 1:-24298376 MsG0180001626.01.T01:CDS
GTTCCTTTGTTGTCGGGTTC+TGG 0.275311 1:+24296777 None:intergenic
TCATCCTCCATTTCCTTGCT+TGG 0.281673 1:-24298344 MsG0180001626.01.T01:CDS
CACTTTGAATACTAGAGATT+TGG 0.294557 1:+24298690 None:intergenic
TTATAACCATGATCCAAATA+TGG 0.301048 1:-24298551 MsG0180001626.01.T01:CDS
TATAATCCCGCAGTAGTTAA+AGG 0.315636 1:+24296348 None:intergenic
ATCCATTTGCAGGTAGGTTA+AGG 0.320236 1:-24298468 MsG0180001626.01.T01:CDS
AAATCATTGCTGCATACTTT+TGG 0.324455 1:-24296641 MsG0180001626.01.T01:CDS
GAACTTCTTTATGATGTTCC+AGG 0.333980 1:-24298319 MsG0180001626.01.T01:CDS
TGTTACACGTGCTGGATTTA+GGG 0.349126 1:-24296313 MsG0180001626.01.T01:CDS
GGAGGGGATGGTGCTCTTCC+TGG 0.355512 1:-24296243 MsG0180001626.01.T01:CDS
GTTCACCGCACTTTCTTCAT+TGG 0.359527 1:-24296732 MsG0180001626.01.T01:CDS
CCTGCAGTTGTAACCGCAAC+GGG 0.366367 1:+24296489 None:intergenic
CAACTTCCAAATAGTTACTA+TGG 0.371901 1:-24296528 MsG0180001626.01.T01:CDS
CCCGTTGCGGTTACAACTGC+AGG 0.395172 1:-24296489 MsG0180001626.01.T01:CDS
CAAAATTAACCAGCCTACTA+AGG 0.403998 1:-24296097 MsG0180001626.01.T01:CDS
TCCATTTGCAGGTAGGTTAA+GGG 0.408126 1:-24298467 MsG0180001626.01.T01:CDS
ACAAATGATAAAGGAGAGAA+AGG 0.408216 1:-24296195 MsG0180001626.01.T01:CDS
AACATGGTTCCTTTGTTGTC+GGG 0.413970 1:+24296771 None:intergenic
AGTTCATCCAAGCAAGGAAA+TGG 0.414422 1:+24298337 None:intergenic
TCCCTGCCATATTTGGATCA+TGG 0.420285 1:+24298545 None:intergenic
GCGGTGAACCATGTCGTCTA+AGG 0.420378 1:+24296746 None:intergenic
AGGTCCTAGTAGGAAACTTA+TGG 0.427564 1:-24298443 MsG0180001626.01.T01:CDS
AGTAACTATTTGGAAGTTGT+TGG 0.428564 1:+24296532 None:intergenic
TCCCTTAACCTACCTGCAAA+TGG 0.437418 1:+24298466 None:intergenic
AATTGGAGTATTGTTGCAAT+TGG 0.448429 1:+24296667 None:intergenic
CGTCCTCCTTTAACTACTGC+GGG 0.454902 1:-24296354 MsG0180001626.01.T01:CDS
CACTCCATTGCTACTTATCC+AGG 0.458160 1:-24298278 MsG0180001626.01.T01:intron
CTCCACACCGGTGAGATTGA+AGG 0.462106 1:+24296861 None:intergenic
TGCTTTAGCGTTTCCCGTTG+CGG 0.463673 1:-24296502 MsG0180001626.01.T01:CDS
GGAGAGGTTGGTTAAAGAGT+TGG 0.469038 1:-24296136 MsG0180001626.01.T01:CDS
CTTGCCAACGTAATGAATCT+TGG 0.470742 1:+24298590 None:intergenic
AACCATGATCCAAATATGGC+AGG 0.473833 1:-24298547 MsG0180001626.01.T01:CDS
AGAGAAAGGTTTGGTTATAC+CGG 0.481825 1:-24296181 MsG0180001626.01.T01:CDS
CTGATGCATCACTCAATGTA+TGG 0.482975 1:+24296937 None:intergenic
AAACATGGTTCCTTTGTTGT+CGG 0.483476 1:+24296770 None:intergenic
TGAGTAAATGTCACTCTTGG+TGG 0.484486 1:+24296813 None:intergenic
CCATTGTGATCACCCTTAGT+AGG 0.484592 1:+24296084 None:intergenic
AAACTTATGGTTGATTGTAA+TGG 0.490791 1:-24298430 MsG0180001626.01.T01:CDS
TTGAAGGTGTTATCAATTCA+GGG 0.491855 1:+24298656 None:intergenic
GCACCATCCCCTCCTTTAGC+TGG 0.492161 1:+24296252 None:intergenic
GTGTCTGATGTTACACGTGC+TGG 0.496612 1:-24296321 MsG0180001626.01.T01:CDS
TGTGATCACCCTTAGTAGGC+TGG 0.505166 1:+24296088 None:intergenic
TATTGTTGCAATTGGTGAGT+TGG 0.518445 1:+24296675 None:intergenic
TGGTTATAAAATTGTATCAA+AGG 0.519033 1:+24298565 None:intergenic
GGTTAAGGGAAGGTCCTAGT+AGG 0.521835 1:-24298453 MsG0180001626.01.T01:CDS
AAAACTTGTTGAAAATCCAT+TGG 0.522732 1:-24296466 MsG0180001626.01.T01:CDS
TGATAAAGGAGAGAAAGGTT+TGG 0.523809 1:-24296190 MsG0180001626.01.T01:CDS
AACTCAAGTCATGGAGAGGT+TGG 0.531928 1:-24296148 MsG0180001626.01.T01:CDS
AACAGATTTGCTACGTGCAT+CGG 0.534097 1:+24296557 None:intergenic
AACCTCTCCATGACTTGAGT+TGG 0.536373 1:+24296150 None:intergenic
TCAACCATAAGTTTCCTACT+AGG 0.537063 1:+24298439 None:intergenic
CATGTTTCCCTTAGACGACA+TGG 0.537703 1:-24296754 MsG0180001626.01.T01:CDS
CCCGCGAGATATCTCTCCTA+AGG 0.540283 1:+24296893 None:intergenic
TCCTGCAGTTGTAACCGCAA+CGG 0.546523 1:+24296488 None:intergenic
CGATGAGTAAATGTCACTCT+TGG 0.547541 1:+24296810 None:intergenic
ACCATGATCCAAATATGGCA+GGG 0.552731 1:-24298546 MsG0180001626.01.T01:CDS
GCAGAGAGCTTCTTAACGCA+AGG 0.556473 1:-24296839 MsG0180001626.01.T01:CDS
CTCTAGTATTCAAAGTGAAG+AGG 0.559433 1:-24298684 MsG0180001626.01.T01:CDS
GTTTATGGAGGACCAGCTAA+AGG 0.560640 1:-24296264 MsG0180001626.01.T01:CDS
CGGTGAACCATGTCGTCTAA+GGG 0.561272 1:+24296747 None:intergenic
CATACATTGAGTGATGCATC+AGG 0.566369 1:-24296936 MsG0180001626.01.T01:CDS
TTTACTATCCATTTGCAGGT+AGG 0.573968 1:-24298474 MsG0180001626.01.T01:CDS
TGCCAACTCAAGTCATGGAG+AGG 0.581695 1:-24296152 MsG0180001626.01.T01:CDS
ACAACTAGATTCTAACGAAG+AGG 0.582842 1:-24296598 MsG0180001626.01.T01:CDS
TCGTCCTCCTTTAACTACTG+CGG 0.583673 1:-24296355 MsG0180001626.01.T01:CDS
GAGTAAACCTTCAATCTCAC+CGG 0.590238 1:-24296868 MsG0180001626.01.T01:CDS
CGAATTGCAGCTACCTCGGT+GGG 0.592586 1:+24296708 None:intergenic
GGACCAGCTAAAGGAGGGGA+TGG 0.594000 1:-24296255 MsG0180001626.01.T01:CDS
AAATTCAACGCATACACCAA+TGG 0.594850 1:+24296450 None:intergenic
TTAATCACATCTGAAGAACC+TGG 0.598479 1:+24298301 None:intergenic
CATGTCGTCTAAGGGAAACA+TGG 0.598974 1:+24296755 None:intergenic
AGAGCGAATTGCAGCTACCT+CGG 0.600847 1:+24296704 None:intergenic
ATGGAGGACCAGCTAAAGGA+GGG 0.603039 1:-24296260 MsG0180001626.01.T01:CDS
AAAATTAACCAGCCTACTAA+GGG 0.605486 1:-24296096 MsG0180001626.01.T01:CDS
TATACCTGGATAAGTAGCAA+TGG 0.605830 1:+24298274 None:intergenic
ATATGAAAGACAGCTTGACC+AGG 0.606019 1:+24296225 None:intergenic
GTTGCAATTGGTGAGTTGGA+AGG 0.610618 1:+24296679 None:intergenic
AGATAAAACCACCACACTTG+AGG 0.612567 1:+24296976 None:intergenic
TAAAGAAGTTCATCCAAGCA+AGG 0.615141 1:+24298331 None:intergenic
TCATCCAAGCAAGGAAATGG+AGG 0.615425 1:+24298340 None:intergenic
GAATTTAGTTAAGAAAGCAA+AGG 0.616320 1:-24296433 MsG0180001626.01.T01:CDS
CAGGTAACACGCCTCAAGTG+TGG 0.617684 1:-24296987 MsG0180001626.01.T01:CDS
ATGGTTGATTGTAATGGTGA+AGG 0.618125 1:-24298424 MsG0180001626.01.T01:CDS
GCCTTAGGAGAGATATCTCG+CGG 0.618905 1:-24296894 MsG0180001626.01.T01:CDS
ATGACCAAGATTCATTACGT+TGG 0.619237 1:-24298594 MsG0180001626.01.T01:CDS
TATGGAGGACCAGCTAAAGG+AGG 0.622508 1:-24296261 MsG0180001626.01.T01:CDS
GAACCAGAACCCGACAACAA+AGG 0.627957 1:-24296780 MsG0180001626.01.T01:CDS
CAGAGAGCTTCTTAACGCAA+GGG 0.631889 1:-24296838 MsG0180001626.01.T01:CDS
AACCTTCAATCTCACCGGTG+TGG 0.645966 1:-24296863 MsG0180001626.01.T01:CDS
TTTGCAGGTAGGTTAAGGGA+AGG 0.651163 1:-24298463 MsG0180001626.01.T01:CDS
CCTACTAAGGGTGATCACAA+TGG 0.657807 1:-24296084 MsG0180001626.01.T01:CDS
GCGAATTGCAGCTACCTCGG+TGG 0.658016 1:+24296707 None:intergenic
AGAAGCTCTCTGCTCCACAC+CGG 0.659501 1:+24296849 None:intergenic
TGGGACCAATGAAGAAAGTG+CGG 0.689546 1:+24296727 None:intergenic
CCTTAGGAGAGATATCTCGC+GGG 0.690826 1:-24296893 MsG0180001626.01.T01:CDS
AATCCCGCAGTAGTTAAAGG+AGG 0.692126 1:+24296351 None:intergenic
GTAACACGCCTCAAGTGTGG+TGG 0.692143 1:-24296984 MsG0180001626.01.T01:CDS
TGGAGGACCAGCTAAAGGAG+GGG 0.700713 1:-24296259 MsG0180001626.01.T01:CDS
TTTCTTCATTGGTCCCACCG+AGG 0.730036 1:-24296721 MsG0180001626.01.T01:CDS
CAAAGAGTATATGCACTCAG+TGG 0.731748 1:-24296400 MsG0180001626.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAATTTAAAATTTTGTG+GGG - Chr1:24297214-24297233 MsG0180001626.01.T01:intron 10.0%
!!! AAATATTTTTTTATAAGGAT+TGG - Chr1:24296900-24296919 MsG0180001626.01.T01:CDS 10.0%
!!! AAATTTTTTATTAATTGAAG+TGG - Chr1:24297590-24297609 MsG0180001626.01.T01:intron 10.0%
!!! TTTAAACCTTATTTTTAATA+TGG + Chr1:24296750-24296769 None:intergenic 10.0%
!! AAAATGATTCAAATATATTG+TGG - Chr1:24297271-24297290 MsG0180001626.01.T01:intron 15.0%
!! ATAAAAAGTAGTATATTTGT+AGG - Chr1:24296993-24297012 MsG0180001626.01.T01:intron 15.0%
!!! AAGTTGAAGTAATATTTTAT+AGG - Chr1:24297302-24297321 MsG0180001626.01.T01:intron 15.0%
!!! AGTTGAAGTAATATTTTATA+GGG - Chr1:24297303-24297322 MsG0180001626.01.T01:intron 15.0%
!!! ATATTTGAATCATTTTTTGA+AGG + Chr1:24297267-24297286 None:intergenic 15.0%
!!! CAATTTATTTTATCTTTTCA+AGG - Chr1:24296937-24296956 MsG0180001626.01.T01:CDS 15.0%
!!! TTCAATTCATTTTAACTTTT+AGG + Chr1:24297036-24297055 None:intergenic 15.0%
!! CATGTTAAAAAATTGTTACA+AGG + Chr1:24297493-24297512 None:intergenic 20.0%
!! GATATTACTCTTAAACAATT+TGG - Chr1:24296380-24296399 MsG0180001626.01.T01:CDS 20.0%
!! TAGAAAGTTCAAATCTTTAT+GGG + Chr1:24297640-24297659 None:intergenic 20.0%
!! TATAACAAATGTAACATCAA+AGG + Chr1:24297663-24297682 None:intergenic 20.0%
!! TGGTTATAAAATTGTATCAA+AGG + Chr1:24296194-24296213 None:intergenic 20.0%
!! TTTAGGCCATATTAAAAATA+AGG - Chr1:24296741-24296760 MsG0180001626.01.T01:CDS 20.0%
!!! ATTATTTTAACAAGTGATGA+TGG + Chr1:24297201-24297220 None:intergenic 20.0%
!!! ATTCCTTTTACAAATGATAA+AGG - Chr1:24298552-24298571 MsG0180001626.01.T01:CDS 20.0%
! AAACTTATGGTTGATTGTAA+TGG - Chr1:24296326-24296345 MsG0180001626.01.T01:CDS 25.0%
! AATCATAAAAGGTTTAAGCT+CGG + Chr1:24297175-24297194 None:intergenic 25.0%
! AATCTTTATGGGGTTAAAAA+TGG + Chr1:24297629-24297648 None:intergenic 25.0%
! AGAAAGTTCAAATCTTTATG+GGG + Chr1:24297639-24297658 None:intergenic 25.0%
! ATGATTCAAATATATTGTGG+TGG - Chr1:24297274-24297293 MsG0180001626.01.T01:intron 25.0%
! GAATTTAGTTAAGAAAGCAA+AGG - Chr1:24298323-24298342 MsG0180001626.01.T01:CDS 25.0%
! GTAGAAAGTTCAAATCTTTA+TGG + Chr1:24297641-24297660 None:intergenic 25.0%
! GTCCTTTCAATACTTATTTA+AGG + Chr1:24296837-24296856 None:intergenic 25.0%
! TATGCAGTGAATTAAACTTA+AGG + Chr1:24297706-24297725 None:intergenic 25.0%
! TCTCCTTTATCATTTGTAAA+AGG + Chr1:24298558-24298577 None:intergenic 25.0%
! TGATTCAAATATATTGTGGT+GGG - Chr1:24297275-24297294 MsG0180001626.01.T01:intron 25.0%
! TTATAACCATGATCCAAATA+TGG - Chr1:24296205-24296224 MsG0180001626.01.T01:CDS 25.0%
!! AAAATGAATTGAAGCCTTAT+CGG - Chr1:24297043-24297062 MsG0180001626.01.T01:intron 25.0%
!! AAAGTTTTCCGATAATATGT+AGG + Chr1:24296524-24296543 None:intergenic 25.0%
!! AAGTTTTCCGATAATATGTA+GGG + Chr1:24296523-24296542 None:intergenic 25.0%
!! ACATTTTTATTGAGATCACA+CGG - Chr1:24296593-24296612 MsG0180001626.01.T01:CDS 25.0%
!!! AAAACTTGTTGAAAATCCAT+TGG - Chr1:24298290-24298309 MsG0180001626.01.T01:CDS 25.0%
!!! ATCAAGAGTATTTAAAAGCT+TGG + Chr1:24297076-24297095 None:intergenic 25.0%
!!! GATGATGGATTAATCATAAA+AGG + Chr1:24297186-24297205 None:intergenic 25.0%
!!! GTCCTTAAATAAGTATTGAA+AGG - Chr1:24296832-24296851 MsG0180001626.01.T01:CDS 25.0%
!!! TTATTTTAAAATTGGGCAAG+TGG - Chr1:24297567-24297586 MsG0180001626.01.T01:intron 25.0%
AAAATTAACCAGCCTACTAA+GGG - Chr1:24298660-24298679 MsG0180001626.01.T01:CDS 30.0%
ACAAATGATAAAGGAGAGAA+AGG - Chr1:24298561-24298580 MsG0180001626.01.T01:CDS 30.0%
AGTAACTATTTGGAAGTTGT+TGG + Chr1:24298227-24298246 None:intergenic 30.0%
CAACTTCCAAATAGTTACTA+TGG - Chr1:24298228-24298247 MsG0180001626.01.T01:intron 30.0%
CACTTTGAATACTAGAGATT+TGG + Chr1:24296069-24296088 None:intergenic 30.0%
GAAAAGATCAATTGTATACC+TGG + Chr1:24296499-24296518 None:intergenic 30.0%
GCATTACCATAGTAACTATT+TGG + Chr1:24298237-24298256 None:intergenic 30.0%
TGCAGCAATGATTTCAAAAT+TGG + Chr1:24298109-24298128 None:intergenic 30.0%
! AAATCATTGCTGCATACTTT+TGG - Chr1:24298115-24298134 MsG0180001626.01.T01:intron 30.0%
! CTTTTCACCCTACATATTAT+CGG - Chr1:24296513-24296532 MsG0180001626.01.T01:CDS 30.0%
! CTTTTCGAATAACATCAACA+GGG + Chr1:24296241-24296260 None:intergenic 30.0%
! GCAGATTTTATGGTTATCAA+GGG - Chr1:24298378-24298397 MsG0180001626.01.T01:CDS 30.0%
!! AAGAGTATTTAAAAGCTTGG+TGG + Chr1:24297073-24297092 None:intergenic 30.0%
!! AATTGGAGTATTGTTGCAAT+TGG + Chr1:24298092-24298111 None:intergenic 30.0%
!! TTGAAGGTGTTATCAATTCA+GGG + Chr1:24296103-24296122 None:intergenic 30.0%
!! TTTGAAGGTGTTATCAATTC+AGG + Chr1:24296104-24296123 None:intergenic 30.0%
AAATTCAACGCATACACCAA+TGG + Chr1:24298309-24298328 None:intergenic 35.0%
ACAACTAGATTCTAACGAAG+AGG - Chr1:24298158-24298177 MsG0180001626.01.T01:intron 35.0%
ACGGGTGTGTATAAGTATAA+GGG + Chr1:24297377-24297396 None:intergenic 35.0%
ATGACCAAGATTCATTACGT+TGG - Chr1:24296162-24296181 MsG0180001626.01.T01:CDS 35.0%
ATGGTTGATTGTAATGGTGA+AGG - Chr1:24296332-24296351 MsG0180001626.01.T01:CDS 35.0%
CAAAATTAACCAGCCTACTA+AGG - Chr1:24298659-24298678 MsG0180001626.01.T01:CDS 35.0%
CGATCACAATCAAACACTTA+CGG + Chr1:24297396-24297415 None:intergenic 35.0%
CGTAAGTGTTTGATTGTGAT+CGG - Chr1:24297394-24297413 MsG0180001626.01.T01:intron 35.0%
CTCTAGTATTCAAAGTGAAG+AGG - Chr1:24296072-24296091 MsG0180001626.01.T01:CDS 35.0%
GAACTTCTTTATGATGTTCC+AGG - Chr1:24296437-24296456 MsG0180001626.01.T01:CDS 35.0%
GATCACAATCAAACACTTAC+GGG + Chr1:24297395-24297414 None:intergenic 35.0%
GGAAAACTTTGCATTATAGC+CGG - Chr1:24296534-24296553 MsG0180001626.01.T01:CDS 35.0%
TAAAGAAGTTCATCCAAGCA+AGG + Chr1:24296428-24296447 None:intergenic 35.0%
TACGGGTGTGTATAAGTATA+AGG + Chr1:24297378-24297397 None:intergenic 35.0%
TATAATCCCGCAGTAGTTAA+AGG + Chr1:24298411-24298430 None:intergenic 35.0%
TATACCTGGATAAGTAGCAA+TGG + Chr1:24296485-24296504 None:intergenic 35.0%
TATTGTTGCAATTGGTGAGT+TGG + Chr1:24298084-24298103 None:intergenic 35.0%
TCAACCATAAGTTTCCTACT+AGG + Chr1:24296320-24296339 None:intergenic 35.0%
TGATAAAGGAGAGAAAGGTT+TGG - Chr1:24298566-24298585 MsG0180001626.01.T01:CDS 35.0%
TTAATCACATCTGAAGAACC+TGG + Chr1:24296458-24296477 None:intergenic 35.0%
TTTACTATCCATTTGCAGGT+AGG - Chr1:24296282-24296301 MsG0180001626.01.T01:CDS 35.0%
! AAACATGGTTCCTTTGTTGT+CGG + Chr1:24297989-24298008 None:intergenic 35.0%
! AGAGAAAGGTTTGGTTATAC+CGG - Chr1:24298575-24298594 MsG0180001626.01.T01:CDS 35.0%
! GAAAGCGTAAAAATCATGAC+CGG + Chr1:24296556-24296575 None:intergenic 35.0%
! GCTTTTCGAATAACATCAAC+AGG + Chr1:24296242-24296261 None:intergenic 35.0%
! GGCAGATTTTATGGTTATCA+AGG - Chr1:24298377-24298396 MsG0180001626.01.T01:CDS 35.0%
! GTGTTTTACTATCCATTTGC+AGG - Chr1:24296278-24296297 MsG0180001626.01.T01:CDS 35.0%
!! ACTTGAGTTGGCAAAAAAAC+CGG + Chr1:24298597-24298616 None:intergenic 35.0%
!!! AGTTTTGTTTCATGAGGTGT+GGG + Chr1:24296128-24296147 None:intergenic 35.0%
!!! CTTCAATTTTTGAGTGCCTT+AGG - Chr1:24297847-24297866 MsG0180001626.01.T01:intron 35.0%
!!! GAGAGTAGTTTTGTTTCATG+AGG + Chr1:24296134-24296153 None:intergenic 35.0%
!!! GGATTTAGGGATGTTGATTT+TGG - Chr1:24298456-24298475 MsG0180001626.01.T01:CDS 35.0%
!!! TAGGGATGTTGATTTTGGTT+GGG - Chr1:24298461-24298480 MsG0180001626.01.T01:CDS 35.0%
!!! TAGTTTTGTTTCATGAGGTG+TGG + Chr1:24296129-24296148 None:intergenic 35.0%
!!! TTAGGGATGTTGATTTTGGT+TGG - Chr1:24298460-24298479 MsG0180001626.01.T01:CDS 35.0%
!!! TTTTTTGCCAACTCAAGTCA+TGG - Chr1:24298599-24298618 MsG0180001626.01.T01:CDS 35.0%
AACCATGATCCAAATATGGC+AGG - Chr1:24296209-24296228 MsG0180001626.01.T01:CDS 40.0%
ACCATGATCCAAATATGGCA+GGG - Chr1:24296210-24296229 MsG0180001626.01.T01:CDS 40.0%
AGATAAAACCACCACACTTG+AGG + Chr1:24297783-24297802 None:intergenic 40.0%
AGGTCCTAGTAGGAAACTTA+TGG - Chr1:24296313-24296332 MsG0180001626.01.T01:CDS 40.0%
AGTTCATCCAAGCAAGGAAA+TGG + Chr1:24296422-24296441 None:intergenic 40.0%
ATATGAAAGACAGCTTGACC+AGG + Chr1:24298534-24298553 None:intergenic 40.0%
ATCCATTTGCAGGTAGGTTA+AGG - Chr1:24296288-24296307 MsG0180001626.01.T01:CDS 40.0%
ATGTTACACGTGCTGGATTT+AGG - Chr1:24298442-24298461 MsG0180001626.01.T01:CDS 40.0%
CACAAACACATCGAAACGAA+AGG + Chr1:24296665-24296684 None:intergenic 40.0%
CATACATTGAGTGATGCATC+AGG - Chr1:24297820-24297839 MsG0180001626.01.T01:intron 40.0%
CGATGAGTAAATGTCACTCT+TGG + Chr1:24297949-24297968 None:intergenic 40.0%
CTGATGCATCACTCAATGTA+TGG + Chr1:24297822-24297841 None:intergenic 40.0%
CTTGAATTGTAACTACGTGC+AGG - Chr1:24297750-24297769 MsG0180001626.01.T01:intron 40.0%
CTTGCCAACGTAATGAATCT+TGG + Chr1:24296169-24296188 None:intergenic 40.0%
GAGTAAACCTTCAATCTCAC+CGG - Chr1:24297888-24297907 MsG0180001626.01.T01:intron 40.0%
TCCATTTGCAGGTAGGTTAA+GGG - Chr1:24296289-24296308 MsG0180001626.01.T01:CDS 40.0%
TGAGTAAATGTCACTCTTGG+TGG + Chr1:24297946-24297965 None:intergenic 40.0%
TGTTACACGTGCTGGATTTA+GGG - Chr1:24298443-24298462 MsG0180001626.01.T01:CDS 40.0%
! AACATGGTTCCTTTGTTGTC+GGG + Chr1:24297988-24298007 None:intergenic 40.0%
! CAAAGAGTATATGCACTCAG+TGG - Chr1:24298356-24298375 MsG0180001626.01.T01:CDS 40.0%
!! AACAGATTTGCTACGTGCAT+CGG + Chr1:24298202-24298221 None:intergenic 40.0%
!!! AGGGATGTTGATTTTGGTTG+GGG - Chr1:24298462-24298481 MsG0180001626.01.T01:CDS 40.0%
AACCTCTCCATGACTTGAGT+TGG + Chr1:24298609-24298628 None:intergenic 45.0%
AACTCAAGTCATGGAGAGGT+TGG - Chr1:24298608-24298627 MsG0180001626.01.T01:CDS 45.0%
AATCCCGCAGTAGTTAAAGG+AGG + Chr1:24298408-24298427 None:intergenic 45.0%
CAGAGAGCTTCTTAACGCAA+GGG - Chr1:24297918-24297937 MsG0180001626.01.T01:intron 45.0%
CATGTCGTCTAAGGGAAACA+TGG + Chr1:24298004-24298023 None:intergenic 45.0%
CATGTTTCCCTTAGACGACA+TGG - Chr1:24298002-24298021 MsG0180001626.01.T01:intron 45.0%
CCATTGTGATCACCCTTAGT+AGG + Chr1:24298675-24298694 None:intergenic 45.0%
CCTACTAAGGGTGATCACAA+TGG - Chr1:24298672-24298691 MsG0180001626.01.T01:CDS 45.0%
GTTCACCGCACTTTCTTCAT+TGG - Chr1:24298024-24298043 MsG0180001626.01.T01:intron 45.0%
GTTTATGGAGGACCAGCTAA+AGG - Chr1:24298492-24298511 MsG0180001626.01.T01:CDS 45.0%
TACGCTTTCACGTTGTCTCT+AGG - Chr1:24296567-24296586 MsG0180001626.01.T01:CDS 45.0%
TCATCCAAGCAAGGAAATGG+AGG + Chr1:24296419-24296438 None:intergenic 45.0%
TCATCCTCCATTTCCTTGCT+TGG - Chr1:24296412-24296431 MsG0180001626.01.T01:CDS 45.0%
TCCCTGCCATATTTGGATCA+TGG + Chr1:24296214-24296233 None:intergenic 45.0%
TCCCTTAACCTACCTGCAAA+TGG + Chr1:24296293-24296312 None:intergenic 45.0%
TCGTCCTCCTTTAACTACTG+CGG - Chr1:24298401-24298420 MsG0180001626.01.T01:CDS 45.0%
TGGGACCAATGAAGAAAGTG+CGG + Chr1:24298032-24298051 None:intergenic 45.0%
TTTGCAGGTAGGTTAAGGGA+AGG - Chr1:24296293-24296312 MsG0180001626.01.T01:CDS 45.0%
! AGCTTGGTGGTATTCCGATA+AGG + Chr1:24297060-24297079 None:intergenic 45.0%
! CACTCCATTGCTACTTATCC+AGG - Chr1:24296478-24296497 MsG0180001626.01.T01:CDS 45.0%
! GCACTCAGTGGCAGATTTTA+TGG - Chr1:24298368-24298387 MsG0180001626.01.T01:CDS 45.0%
! GGAGAGGTTGGTTAAAGAGT+TGG - Chr1:24298620-24298639 MsG0180001626.01.T01:CDS 45.0%
! GTTGCAATTGGTGAGTTGGA+AGG + Chr1:24298080-24298099 None:intergenic 45.0%
!! TCATGAGGTGTGGGTTTTGA+AGG + Chr1:24296119-24296138 None:intergenic 45.0%
!!! GGGATGTTGATTTTGGTTGG+GGG - Chr1:24298463-24298482 MsG0180001626.01.T01:CDS 45.0%
!!! AAAATAATTTAAAATTTTGT+GGG - Chr1:24297213-24297232 MsG0180001626.01.T01:intron 5.0%
!!! ACATAAAATATTTTTTTATA+AGG - Chr1:24296895-24296914 MsG0180001626.01.T01:CDS 5.0%
!!! ACTAAAATTTTAAATTTTAT+AGG - Chr1:24297333-24297352 MsG0180001626.01.T01:intron 5.0%
!!! ATTTTATATCATTTAATTTT+AGG - Chr1:24296724-24296743 MsG0180001626.01.T01:CDS 5.0%
!!! CAAATTTTTATTTTAAAATT+GGG - Chr1:24297560-24297579 MsG0180001626.01.T01:intron 5.0%
!!! TAAAATAATTTAAAATTTTG+TGG - Chr1:24297212-24297231 MsG0180001626.01.T01:intron 5.0%
!!! TATAAAAAAATATTTTATGT+TGG + Chr1:24296895-24296914 None:intergenic 5.0%
!!! TCAAATTTTTATTTTAAAAT+TGG - Chr1:24297559-24297578 MsG0180001626.01.T01:intron 5.0%
!!! TTTTAAAATAAAAATTTGAT+AGG + Chr1:24297558-24297577 None:intergenic 5.0%
AACCTTCAATCTCACCGGTG+TGG - Chr1:24297893-24297912 MsG0180001626.01.T01:intron 50.0%
AGAGCGAATTGCAGCTACCT+CGG + Chr1:24298055-24298074 None:intergenic 50.0%
ATGGAGGACCAGCTAAAGGA+GGG - Chr1:24298496-24298515 MsG0180001626.01.T01:CDS 50.0%
CCTTAGGAGAGATATCTCGC+GGG - Chr1:24297863-24297882 MsG0180001626.01.T01:intron 50.0%
CGGTGAACCATGTCGTCTAA+GGG + Chr1:24298012-24298031 None:intergenic 50.0%
CGTCCTCCTTTAACTACTGC+GGG - Chr1:24298402-24298421 MsG0180001626.01.T01:CDS 50.0%
GAACCAGAACCCGACAACAA+AGG - Chr1:24297976-24297995 MsG0180001626.01.T01:intron 50.0%
GCAGAGAGCTTCTTAACGCA+AGG - Chr1:24297917-24297936 MsG0180001626.01.T01:intron 50.0%
GCCTTAGGAGAGATATCTCG+CGG - Chr1:24297862-24297881 MsG0180001626.01.T01:intron 50.0%
GGGTCTTTCCCTGCCATATT+TGG + Chr1:24296221-24296240 None:intergenic 50.0%
GGTTAAGGGAAGGTCCTAGT+AGG - Chr1:24296303-24296322 MsG0180001626.01.T01:CDS 50.0%
GGTTGGGGGAAAGCTGTTTA+TGG - Chr1:24298477-24298496 MsG0180001626.01.T01:CDS 50.0%
GTGTCTGATGTTACACGTGC+TGG - Chr1:24298435-24298454 MsG0180001626.01.T01:CDS 50.0%
TATGGAGGACCAGCTAAAGG+AGG - Chr1:24298495-24298514 MsG0180001626.01.T01:CDS 50.0%
TCCTGCAGTTGTAACCGCAA+CGG + Chr1:24298271-24298290 None:intergenic 50.0%
TGCCAACTCAAGTCATGGAG+AGG - Chr1:24298604-24298623 MsG0180001626.01.T01:CDS 50.0%
TGCTTTAGCGTTTCCCGTTG+CGG - Chr1:24298254-24298273 MsG0180001626.01.T01:intron 50.0%
TGGGGGAAAGCTGTTTATGG+AGG - Chr1:24298480-24298499 MsG0180001626.01.T01:CDS 50.0%
TGTGATCACCCTTAGTAGGC+TGG + Chr1:24298671-24298690 None:intergenic 50.0%
TTTCTTCATTGGTCCCACCG+AGG - Chr1:24298035-24298054 MsG0180001626.01.T01:intron 50.0%
! GTTCCTTTGTTGTCGGGTTC+TGG + Chr1:24297982-24298001 None:intergenic 50.0%
AGAAGCTCTCTGCTCCACAC+CGG + Chr1:24297910-24297929 None:intergenic 55.0%
CAGGTAACACGCCTCAAGTG+TGG - Chr1:24297769-24297788 MsG0180001626.01.T01:intron 55.0%
CCCGCGAGATATCTCTCCTA+AGG + Chr1:24297866-24297885 None:intergenic 55.0%
CCTGCAGTTGTAACCGCAAC+GGG + Chr1:24298270-24298289 None:intergenic 55.0%
CGAATTGCAGCTACCTCGGT+GGG + Chr1:24298051-24298070 None:intergenic 55.0%
CTCCACACCGGTGAGATTGA+AGG + Chr1:24297898-24297917 None:intergenic 55.0%
GCGGTGAACCATGTCGTCTA+AGG + Chr1:24298013-24298032 None:intergenic 55.0%
GTAACACGCCTCAAGTGTGG+TGG - Chr1:24297772-24297791 MsG0180001626.01.T01:intron 55.0%
TGGAGGACCAGCTAAAGGAG+GGG - Chr1:24298497-24298516 MsG0180001626.01.T01:CDS 55.0%
CCCGTTGCGGTTACAACTGC+AGG - Chr1:24298267-24298286 MsG0180001626.01.T01:intron 60.0%
GCACCATCCCCTCCTTTAGC+TGG + Chr1:24298507-24298526 None:intergenic 60.0%
GCGAATTGCAGCTACCTCGG+TGG + Chr1:24298052-24298071 None:intergenic 60.0%
GGACCAGCTAAAGGAGGGGA+TGG - Chr1:24298501-24298520 MsG0180001626.01.T01:CDS 60.0%
GGAGGGGATGGTGCTCTTCC+TGG - Chr1:24298513-24298532 MsG0180001626.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 24296062 24298716 24296062 ID=MsG0180001626.01;Name=MsG0180001626.01
Chr1 mRNA 24296062 24298716 24296062 ID=MsG0180001626.01.T01;Parent=MsG0180001626.01;Name=MsG0180001626.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|460
Chr1 exon 24298279 24298716 24298279 ID=MsG0180001626.01.T01:exon:40728;Parent=MsG0180001626.01.T01
Chr1 exon 24296062 24297006 24296062 ID=MsG0180001626.01.T01:exon:40727;Parent=MsG0180001626.01.T01
Chr1 CDS 24298279 24298716 24298279 ID=MsG0180001626.01.T01:cds;Parent=MsG0180001626.01.T01
Chr1 CDS 24296062 24297006 24296062 ID=MsG0180001626.01.T01:cds;Parent=MsG0180001626.01.T01
Gene Sequence

>MsG0180001626.01.T01

ATGGCCAAATCTCTAGTATTCAAAGTGAAGAGGCGTGACCCTGAATTGATAACACCTTCAAAACCCACACCTCATGAAACAAAACTACTCTCAGACATTGATGACCAAGATTCATTACGTTGGCAAGTTCCTTTGATACAATTTTATAACCATGATCCAAATATGGCAGGGAAAGACCCTGTTGATGTTATTCGAAAAGCATTAGCAAAAACACTTGTGTTTTACTATCCATTTGCAGGTAGGTTAAGGGAAGGTCCTAGTAGGAAACTTATGGTTGATTGTAATGGTGAAGGTGTTTTGTTCATTGAAGCTGATGCTGATATTACTCTTAAACAATTTGGTGATGCTCTTCATCCTCCATTTCCTTGCTTGGATGAACTTCTTTATGATGTTCCAGGTTCTTCAGATGTGATTAACACTCCATTGCTACTTATCCAGGTAACACGCCTCAAGTGTGGTGGTTTTATCTTTGCTCTTCGTATGAACCATACATTGAGTGATGCATCAGGTATGCTTCAATTTTTGAGTGCCTTAGGAGAGATATCTCGCGGGATGAGTAAACCTTCAATCTCACCGGTGTGGAGCAGAGAGCTTCTTAACGCAAGGGATCCACCAAGAGTGACATTTACTCATCGTGAATATGAACCAGAACCCGACAACAAAGGAACCATGTTTCCCTTAGACGACATGGTTCACCGCACTTTCTTCATTGGTCCCACCGAGGTAGCTGCAATTCGCTCTCTCCTTCCAACTCACCAATTGCAACAATACTCCAATTTTGAAATCATTGCTGCATACTTTTGGCGTTGTCGTACAATAGCATTACAACTAGATTCTAACGAAGAGGTTCGCATAATCTGCATAGCCGATGCACGTAGCAAATCTGTTGACCAACAACTTCCAAATAGTTACTATGGTAATGCTTTAGCGTTTCCCGTTGCGGTTACAACTGCAGGAAAACTTGTTGAAAATCCATTGGTGTATGCGTTGAATTTAGTTAAGAAAGCAAAGGCTAACGTCGACAAAGAGTATATGCACTCAGTGGCAGATTTTATGGTTATCAAGGGTCGTCCTCCTTTAACTACTGCGGGATTATATTTAGTGTCTGATGTTACACGTGCTGGATTTAGGGATGTTGATTTTGGTTGGGGGAAAGCTGTTTATGGAGGACCAGCTAAAGGAGGGGATGGTGCTCTTCCTGGTCAAGCTGTCTTTCATATTCCTTTTACAAATGATAAAGGAGAGAAAGGTTTGGTTATACCGGTTTTTTTGCCAACTCAAGTCATGGAGAGGTTGGTTAAAGAGTTGGATAGTGTTCTTAAGAACAAAATTAACCAGCCTACTAAGGGTGATCACAATGGCATCATTAAATCTTCGTTGTAG
Protein sequence

>MsG0180001626.01.T01

MAKSLVFKVKRRDPELITPSKPTPHETKLLSDIDDQDSLRWQVPLIQFYNHDPNMAGKDPVDVIRKALAKTLVFYYPFAGRLREGPSRKLMVDCNGEGVLFIEADADITLKQFGDALHPPFPCLDELLYDVPGSSDVINTPLLLIQVTRLKCGGFIFALRMNHTLSDASGMLQFLSALGEISRGMSKPSISPVWSRELLNARDPPRVTFTHREYEPEPDNKGTMFPLDDMVHRTFFIGPTEVAAIRSLLPTHQLQQYSNFEIIAAYFWRCRTIALQLDSNEEVRIICIADARSKSVDQQLPNSYYGNALAFPVAVTTAGKLVENPLVYALNLVKKAKANVDKEYMHSVADFMVIKGRPPLTTAGLYLVSDVTRAGFRDVDFGWGKAVYGGPAKGGDGALPGQAVFHIPFTNDKGEKGLVIPVFLPTQVMERLVKELDSVLKNKINQPTKGDHNGIIKSSL*