AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017151.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017151.01.T01 MTR_3g101900 94.725 455 18 1 1 455 1 449 0.0 894
MsG0380017151.01.T01 MTR_3g101930 72.429 457 119 3 1 453 1 454 0.0 692
MsG0380017151.01.T01 MTR_3g102020 67.249 458 140 3 2 455 1 452 0.0 629
MsG0380017151.01.T01 MTR_3g101960 67.406 451 138 3 2 449 1 445 0.0 623
MsG0380017151.01.T01 MTR_3g101970 65.066 458 136 3 2 455 1 438 0.0 609
MsG0380017151.01.T01 MTR_3g102010 65.652 460 149 4 1 457 1 454 0.0 609
MsG0380017151.01.T01 MTR_3g102030 57.407 324 106 4 84 407 29 320 2.64e-123 367
MsG0380017151.01.T01 MTR_4g094842 39.121 455 252 11 7 450 4 444 2.40e-94 297
MsG0380017151.01.T01 MTR_4g094835 40.138 436 229 10 26 450 28 442 2.25e-91 290
MsG0380017151.01.T01 MTR_8g041770 38.322 441 243 10 22 454 22 441 4.66e-91 288
MsG0380017151.01.T01 MTR_3g088420 39.269 438 237 10 24 454 18 433 2.43e-90 286
MsG0380017151.01.T01 MTR_4g022800 38.600 443 242 12 24 454 18 442 1.51e-89 285
MsG0380017151.01.T01 MTR_4g015180 36.759 506 248 10 2 454 1 487 6.35e-89 285
MsG0380017151.01.T01 MTR_4g022825 38.938 452 238 12 18 454 12 440 8.19e-89 283
MsG0380017151.01.T01 MTR_4g022670 38.288 444 241 11 24 454 18 441 1.51e-88 282
MsG0380017151.01.T01 MTR_4g022720 39.220 436 242 9 24 454 18 435 1.80e-88 281
MsG0380017151.01.T01 MTR_3g070170 37.069 464 227 11 30 454 33 470 5.54e-88 281
MsG0380017151.01.T01 MTR_0190s0020 38.140 430 247 8 29 454 28 442 2.01e-87 279
MsG0380017151.01.T01 MTR_4g094838 37.617 428 233 6 30 450 28 428 2.99e-85 273
MsG0380017151.01.T01 MTR_5g081960 35.318 487 256 13 10 450 9 482 4.04e-82 267
MsG0380017151.01.T01 MTR_7g026860 37.020 443 245 12 24 454 18 438 6.68e-82 265
MsG0380017151.01.T01 MTR_3g026310 37.079 445 240 11 30 454 24 448 9.67e-78 254
MsG0380017151.01.T01 MTR_4g094832 40.625 352 193 5 104 450 86 426 6.46e-77 251
MsG0380017151.01.T01 MTR_4g022290 35.214 443 250 11 24 452 24 443 3.10e-75 247
MsG0380017151.01.T01 MTR_4g094828 35.794 447 254 11 24 455 23 451 1.11e-73 243
MsG0380017151.01.T01 MTR_4g022760 37.366 372 207 8 24 384 18 374 1.23e-70 234
MsG0380017151.01.T01 MTR_8g079710 34.873 433 248 14 24 443 23 434 1.27e-66 224
MsG0380017151.01.T01 MTR_6g045553 30.675 489 269 14 7 453 14 474 7.62e-59 204
MsG0380017151.01.T01 MTR_6g016815 31.336 434 211 10 24 454 32 381 5.46e-50 178
MsG0380017151.01.T01 MTR_4g007540 28.188 447 262 18 24 444 14 427 4.42e-40 152
MsG0380017151.01.T01 MTR_8g075610 26.923 442 270 15 24 444 5 414 4.36e-39 149
MsG0380017151.01.T01 MTR_2g064495 28.935 432 241 17 41 444 33 426 1.48e-38 147
MsG0380017151.01.T01 MTR_8g040780 34.156 243 148 6 222 458 1 237 2.02e-38 142
MsG0380017151.01.T01 MTR_2g105330 29.167 432 240 18 41 444 33 426 4.60e-38 146
MsG0380017151.01.T01 MTR_7g026850 41.509 159 84 4 44 201 21 171 2.78e-31 120
MsG0380017151.01.T01 MTR_8g096530 30.573 314 184 11 60 360 53 345 6.53e-31 126
MsG0380017151.01.T01 MTR_3g098980 27.877 391 243 13 66 444 66 429 8.01e-31 125
MsG0380017151.01.T01 MTR_7g026770 38.798 183 86 3 154 336 132 288 1.72e-30 122
MsG0380017151.01.T01 MTR_3g026950 24.186 430 254 15 40 429 32 429 5.19e-28 117
MsG0380017151.01.T01 MTR_3g049150 26.034 411 250 12 48 429 40 425 8.44e-28 117
MsG0380017151.01.T01 MTR_8g040760 35.922 206 118 5 23 227 20 212 9.72e-28 111
MsG0380017151.01.T01 MTR_4g127650 25.056 443 280 15 30 444 31 449 7.14e-26 111
MsG0380017151.01.T01 MTR_6g034495 43.443 122 68 1 77 197 45 166 1.48e-25 103
MsG0380017151.01.T01 MTR_4g094825 38.650 163 95 2 30 191 92 250 1.15e-24 107
MsG0380017151.01.T01 MTR_4g094825 36.667 150 84 3 305 454 253 391 6.03e-23 101
MsG0380017151.01.T01 MTR_7g114520 25.367 477 294 20 3 451 4 446 6.56e-23 102
MsG0380017151.01.T01 MTR_4g097090 24.943 437 271 14 30 435 30 440 2.00e-22 100
MsG0380017151.01.T01 MTR_7g085930 27.064 436 247 16 48 440 43 450 2.85e-22 100
MsG0380017151.01.T01 MTR_5g076700 25.104 482 292 23 1 451 1 444 4.55e-22 100
MsG0380017151.01.T01 MTR_3g071320 26.634 413 258 15 9 403 6 391 4.94e-22 99.8
MsG0380017151.01.T01 MTR_7g086000 27.189 434 254 16 48 444 42 450 6.73e-22 99.8
MsG0380017151.01.T01 MTR_7g085990 27.252 433 258 17 48 444 39 450 9.15e-22 99.0
MsG0380017151.01.T01 MTR_6g015815 25.376 465 296 14 9 443 9 452 3.80e-21 97.1
MsG0380017151.01.T01 MTR_5g026320 24.576 472 286 21 7 449 18 448 7.35e-20 93.2
MsG0380017151.01.T01 MTR_7g084940 27.119 354 215 12 64 402 67 392 8.41e-20 92.8
MsG0380017151.01.T01 MTR_4g013050 24.570 407 234 14 64 449 51 405 8.78e-20 92.4
MsG0380017151.01.T01 MTR_1g040195 26.933 375 232 15 59 422 33 376 1.14e-19 92.4
MsG0380017151.01.T01 MTR_6g034485 38.462 117 65 2 209 321 2 115 4.32e-19 84.0
MsG0380017151.01.T01 MTR_1g081660 26.368 402 256 15 61 446 68 445 1.45e-18 89.4
MsG0380017151.01.T01 MTR_6g053810 26.990 289 195 9 66 348 71 349 3.10e-18 88.2
MsG0380017151.01.T01 MTR_6g015850 24.454 458 303 14 10 443 11 449 3.24e-18 88.2
MsG0380017151.01.T01 MTR_1g040175 26.303 422 263 21 7 414 9 396 4.30e-18 87.8
MsG0380017151.01.T01 MTR_7g114550 26.959 434 264 21 44 451 37 443 6.47e-18 87.4
MsG0380017151.01.T01 MTR_3g465990 27.273 341 209 14 14 338 17 334 8.79e-18 87.0
MsG0380017151.01.T01 MTR_8g079970 24.893 466 297 21 7 455 3 432 1.26e-17 86.3
MsG0380017151.01.T01 MTR_4g055170 25.882 340 215 12 14 338 19 336 2.89e-17 85.1
MsG0380017151.01.T01 MTR_5g090880 23.711 388 230 14 66 416 67 425 6.95e-17 84.0
MsG0380017151.01.T01 MTR_3g112180 24.432 352 232 11 63 401 58 388 8.18e-17 84.0
MsG0380017151.01.T01 MTR_3g465980 27.114 343 207 15 14 338 17 334 8.19e-17 84.0
MsG0380017151.01.T01 MTR_6g015830 24.083 436 292 13 30 443 34 452 6.02e-16 81.3
MsG0380017151.01.T01 MTR_2g089650 22.697 445 277 20 30 435 29 445 7.22e-16 80.9
MsG0380017151.01.T01 MTR_7g026830 45.783 83 42 2 99 178 15 97 9.32e-16 73.6
MsG0380017151.01.T01 MTR_5g090830 22.798 386 245 11 49 403 49 412 2.60e-15 79.3
MsG0380017151.01.T01 MTR_5g090810 22.539 386 246 11 49 403 49 412 1.97e-14 76.6
MsG0380017151.01.T01 MTR_7g114490 25.185 405 252 17 61 444 60 434 2.02e-14 76.6
MsG0380017151.01.T01 MTR_3g465930 25.073 343 225 11 7 335 10 334 1.19e-13 73.9
MsG0380017151.01.T01 MTR_8g079950 25.160 469 292 21 7 455 3 432 5.74e-13 71.6
MsG0380017151.01.T01 MTR_7g114960 24.925 333 226 10 40 367 37 350 7.37e-13 71.6
MsG0380017151.01.T01 MTR_6g033550 96.875 32 1 0 583 614 29 60 1.02e-12 63.5
MsG0380017151.01.T01 MTR_3g049140 23.645 203 130 3 246 429 27 223 1.90e-12 68.2
MsG0380017151.01.T01 MTR_7g084910 25.746 268 168 7 64 318 68 317 2.98e-12 69.3
MsG0380017151.01.T01 MTR_1g040315 25.143 350 203 17 2 329 1 313 3.59e-12 68.9
MsG0380017151.01.T01 MTR_8g012750 22.850 407 270 13 30 402 26 422 5.99e-12 68.6
MsG0380017151.01.T01 MTR_3g465910 25.267 281 182 9 66 335 68 331 6.32e-12 68.9
MsG0380017151.01.T01 MTR_2g015430 24.000 350 231 11 69 406 61 387 1.02e-11 67.8
MsG0380017151.01.T01 MTR_3g437450 49.398 83 39 1 531 613 193 272 4.28e-11 65.5
MsG0380017151.01.T01 MTR_2g089670 22.475 396 246 11 43 402 59 429 5.99e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017151.01.T01 AT5G42830 54.072 442 198 3 14 455 14 450 6.72e-163 473
MsG0380017151.01.T01 AT5G07850 51.087 460 213 6 3 457 4 456 2.92e-154 452
MsG0380017151.01.T01 AT5G07870 49.676 463 217 6 3 454 4 461 1.19e-146 432
MsG0380017151.01.T01 AT5G07860 50.870 460 207 8 1 453 1 448 1.36e-145 429
MsG0380017151.01.T01 AT5G67150 39.301 458 250 12 10 456 8 448 2.23e-97 305
MsG0380017151.01.T01 AT2G39980 39.451 474 216 9 30 454 29 480 6.98e-97 305
MsG0380017151.01.T01 AT5G01210 36.864 491 250 11 2 454 1 469 4.37e-86 276
MsG0380017151.01.T01 AT3G50270 35.667 457 269 10 10 456 9 450 2.31e-82 266
MsG0380017151.01.T01 AT3G50280 36.303 449 262 11 10 450 7 439 2.56e-81 263
MsG0380017151.01.T01 AT3G50300 34.332 434 263 10 10 436 7 425 3.60e-74 244
MsG0380017151.01.T01 AT5G67160 34.685 444 251 12 22 456 21 434 5.67e-73 241
MsG0380017151.01.T01 AT5G38130 34.091 440 266 12 7 439 24 446 3.04e-71 237
MsG0380017151.01.T01 AT5G23940 33.117 462 275 10 7 450 3 448 3.23e-69 233
MsG0380017151.01.T01 AT3G50280 38.245 319 181 7 138 450 1 309 1.30e-58 199
MsG0380017151.01.T01 AT3G50290 38.571 280 148 7 129 400 6 269 8.83e-49 171
MsG0380017151.01.T01 AT5G48930 29.551 423 235 15 49 444 41 427 1.23e-39 150
MsG0380017151.01.T01 AT5G41040 27.318 399 250 13 60 444 63 435 5.41e-31 126
MsG0380017151.01.T01 AT2G19070 27.494 451 260 18 30 444 25 444 6.81e-31 126
MsG0380017151.01.T01 AT5G41040 27.318 399 250 13 60 444 79 451 6.95e-31 126
MsG0380017151.01.T01 AT3G48720 27.628 409 254 15 6 403 8 385 1.17e-26 113
MsG0380017151.01.T01 AT5G63560 27.007 411 252 15 6 404 8 382 1.36e-26 113
MsG0380017151.01.T01 AT2G40230 27.273 363 211 13 65 405 58 389 9.44e-22 99.0
MsG0380017151.01.T01 AT1G03940 23.918 439 299 15 30 444 30 457 2.98e-21 97.8
MsG0380017151.01.T01 AT3G26040 25.728 412 250 15 63 455 56 430 2.12e-20 94.7
MsG0380017151.01.T01 AT5G57840 25.874 429 242 17 64 455 54 443 3.99e-19 90.9
MsG0380017151.01.T01 AT1G65450 26.823 384 230 17 40 402 47 400 3.28e-18 88.2
MsG0380017151.01.T01 AT1G28680 26.519 362 206 15 69 406 65 390 4.44e-18 87.8
MsG0380017151.01.T01 AT1G28680 26.537 309 180 11 69 358 65 345 1.48e-17 85.5
MsG0380017151.01.T01 AT5G07080 24.048 420 285 17 2 406 6 406 4.41e-17 84.7
MsG0380017151.01.T01 AT1G03495 26.708 322 209 13 30 330 30 345 1.35e-15 79.0
MsG0380017151.01.T01 AT1G24420 25.597 461 296 18 7 455 5 430 1.50e-15 79.7
MsG0380017151.01.T01 AT1G24420 25.597 461 296 18 7 455 5 430 1.50e-15 79.7
MsG0380017151.01.T01 AT1G78990 24.384 365 218 15 64 403 65 396 1.50e-15 80.1
MsG0380017151.01.T01 AT5G39080 23.451 452 282 15 30 443 28 453 3.17e-15 79.0
MsG0380017151.01.T01 AT3G30280 22.105 475 311 18 2 455 1 437 6.85e-14 74.7
MsG0380017151.01.T01 AT1G31490 25.180 417 261 18 52 449 48 432 2.42e-13 72.8
MsG0380017151.01.T01 AT5G39090 23.094 446 277 15 30 443 28 439 6.80e-13 71.6
MsG0380017151.01.T01 AT3G29590 22.273 440 296 17 22 438 19 435 1.56e-12 70.5
MsG0380017151.01.T01 AT1G32910 23.467 375 214 15 64 403 63 399 5.16e-12 68.9
MsG0380017151.01.T01 AT1G65450 27.165 254 151 9 165 402 1 236 1.75e-11 65.9

Find 170 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCATCAAAGTGGTGTTTA+AGG 0.177579 3:+92676447 None:intergenic
AACATGTATGGAAATGAATT+TGG 0.200204 3:-92676392 MsG0380017151.01.T01:CDS
AAACCCCTGTTAATGCTTTC+CGG 0.207410 3:-92673667 MsG0380017151.01.T01:CDS
AAGTTGTCAAATAACATATT+TGG 0.241717 3:+92677488 None:intergenic
AAATTTCATTGATGATCTTT+TGG 0.244067 3:-92677395 MsG0380017151.01.T01:CDS
GAAGAAGATGGGGAAGAAAT+TGG 0.283229 3:+92673591 None:intergenic
TTCCATTTCTATCCTTTATC+TGG 0.285102 3:-92677340 MsG0380017151.01.T01:CDS
TTGGTGATGGAACTTCTTAT+TGG 0.296229 3:-92677045 MsG0380017151.01.T01:CDS
AAAATCCGGAAAGCATTAAC+AGG 0.313352 3:+92673662 None:intergenic
AAACAGCATTCATGAAATTC+TGG 0.315247 3:+92676225 None:intergenic
TGTTCTATGAATCACTATAT+TGG 0.320492 3:-92677064 MsG0380017151.01.T01:CDS
ATCAGTGGACCATGACCTTC+TGG 0.322755 3:+92676917 None:intergenic
CTCTTCCACAAGAGTACTTT+GGG 0.331112 3:-92676631 MsG0380017151.01.T01:CDS
AGGAGGAGGGAGCATGGATT+TGG 0.335716 3:-92676291 MsG0380017151.01.T01:CDS
TTTGCCATCTTTCGTACCTC+TGG 0.340501 3:+92676500 None:intergenic
GGAAGAGGTGGTTTCATTCT+CGG 0.346910 3:+92676647 None:intergenic
ATAATTAAAGTGCGGGTAAT+GGG 0.351580 3:-92674111 MsG0380017151.01.T01:intron
TGAATTGCTAGAGAATGATT+TGG 0.359006 3:-92676570 MsG0380017151.01.T01:CDS
TCTGAAACACGTTGAATGAT+AGG 0.359221 3:+92677550 None:intergenic
TCACCAAGGTTTAACATGTA+TGG 0.363014 3:-92676404 MsG0380017151.01.T01:CDS
GCTGAAAGCTAAGGCCAATA+TGG 0.363379 3:-92676795 MsG0380017151.01.T01:CDS
TCTAGTGCTCTCATCACATT+TGG 0.370186 3:+92676254 None:intergenic
AGTCATTATCAGCACATGTT+TGG 0.378371 3:-92676742 MsG0380017151.01.T01:CDS
AAATATGTTATTTGACAACT+TGG 0.380880 3:-92677486 MsG0380017151.01.T01:CDS
TTTGTTAGAGAATGGCAAAC+AGG 0.389996 3:+92673553 None:intergenic
TATAATTAAAGTGCGGGTAA+TGG 0.394354 3:-92674112 MsG0380017151.01.T01:intron
ACAAGTTGTTACTTGATCAT+TGG 0.401455 3:+92676691 None:intergenic
TAAAGTGCGGGTAATGGGTA+TGG 0.408351 3:-92674106 MsG0380017151.01.T01:intron
ATTTGATTTGAGGAAGAAGA+TGG 0.410308 3:+92673579 None:intergenic
ACAACTGATGGAACATCAAT+TGG 0.410907 3:+92677190 None:intergenic
ACAAAGCCTTTGTTAGAGAA+TGG 0.413162 3:+92673545 None:intergenic
GTTTGTATTAGACTCCATAT+TGG 0.414390 3:+92676781 None:intergenic
CCTCTTCCACAAGAGTACTT+TGG 0.419393 3:-92676632 MsG0380017151.01.T01:CDS
TGTACCCCATCTACTTCAAA+AGG 0.420856 3:-92676176 MsG0380017151.01.T01:CDS
TGTGATGAGAGCACTAGAAT+TGG 0.427916 3:-92676249 MsG0380017151.01.T01:CDS
GTGCCCTTCCCCATACCCTA+TGG 0.433592 3:+92674065 None:intergenic
TATGGAAATGAATTTGGAAT+GGG 0.439212 3:-92676386 MsG0380017151.01.T01:CDS
ACTTAGGTGCCCATAGGGTA+TGG 0.439768 3:-92674075 MsG0380017151.01.T01:CDS
ACAGATATAATTAGAGAGAT+TGG 0.441305 3:+92676196 None:intergenic
ATTTGGTTTGACTCTGGAAT+GGG 0.441319 3:+92677505 None:intergenic
AACAATGACTTAACAACTGA+TGG 0.441689 3:+92677178 None:intergenic
TAACATATTTGGTTTGACTC+TGG 0.441985 3:+92677499 None:intergenic
GAATCTGATGGTTTACTAGT+TGG 0.446536 3:-92673455 MsG0380017151.01.T01:CDS
GAATTGCTAGAGAATGATTT+GGG 0.452968 3:-92676569 MsG0380017151.01.T01:CDS
GTAACAAGACGACCAGATAA+AGG 0.453295 3:+92677328 None:intergenic
TTGCCATCTTTCGTACCTCT+GGG 0.453949 3:+92676501 None:intergenic
GACCAGATAAAGGATAGAAA+TGG 0.453990 3:+92677338 None:intergenic
ACTAAAGAGTAGCAACGGTT+TGG 0.455560 3:+92673514 None:intergenic
TTTGATTTGAGGAAGAAGAT+GGG 0.456721 3:+92673580 None:intergenic
GCTGTACCAGAGGAACTTAC+TGG 0.460818 3:-92673488 MsG0380017151.01.T01:CDS
GACTCTGGAATGGGGTGTAG+AGG 0.467273 3:+92677514 None:intergenic
CTGAAACACGTTGAATGATA+GGG 0.467274 3:+92677551 None:intergenic
CACCCTGTGTATTCCGCAAA+TGG 0.468353 3:-92673784 MsG0380017151.01.T01:CDS
TTCGTACCTCTGGGTCATCA+TGG 0.471436 3:+92676510 None:intergenic
CCAAAGTACTCTTGTGGAAG+AGG 0.473388 3:+92676632 None:intergenic
CGGGTAATGGGTATGGGTAT+CGG 0.477143 3:-92674099 MsG0380017151.01.T01:CDS
TGTTTAAGGCTTAATATCAT+AGG 0.479366 3:+92676461 None:intergenic
CTTAAACACCACTTTGATGC+TGG 0.486430 3:-92676446 MsG0380017151.01.T01:CDS
AAACAGGGGTATTTGATTTG+AGG 0.486755 3:+92673569 None:intergenic
CTTAGGTGCCCATAGGGTAT+GGG 0.488581 3:-92674074 MsG0380017151.01.T01:CDS
ATTGGAATTTCTTTAATACA+TGG 0.493830 3:-92677027 MsG0380017151.01.T01:CDS
AAAGAATCTCTCTCTCAGCT+TGG 0.494857 3:+92676844 None:intergenic
ACATGAAGGAGGAGGGAGCA+TGG 0.495499 3:-92676297 MsG0380017151.01.T01:CDS
GTACCACCAGTAAGTTCCTC+TGG 0.498852 3:+92673482 None:intergenic
ATCTCGTCATGATGTTTGAA+TGG 0.499005 3:+92676887 None:intergenic
ACGAAAATATTATAAGTAGG+AGG 0.500048 3:+92677289 None:intergenic
AAGAATCTCTCTCTCAGCTT+GGG 0.501298 3:+92676845 None:intergenic
TTTCCATACATGTTAAACCT+TGG 0.506348 3:+92676401 None:intergenic
TGCTAGAGAATGATTTGGGA+TGG 0.507254 3:-92676565 MsG0380017151.01.T01:CDS
ATGGAATAGAGCAAGAGAGA+GGG 0.512197 3:+92677357 None:intergenic
TGGAAACCAACGATTGTGAA+AGG 0.513895 3:+92676937 None:intergenic
CATCCACTAGCTCAGTGACT+TGG 0.518092 3:+92677101 None:intergenic
GCCAACCCTTTCACAATCGT+TGG 0.519850 3:-92676943 MsG0380017151.01.T01:CDS
TATTTGGTTTGACTCTGGAA+TGG 0.524231 3:+92677504 None:intergenic
TAACACGATAGTTCCATTTG+CGG 0.525433 3:+92673771 None:intergenic
TGCCCATAGGGTATGGGGAA+GGG 0.525559 3:-92674068 MsG0380017151.01.T01:CDS
TCAACGAAAATATTATAAGT+AGG 0.529867 3:+92677286 None:intergenic
TGGGAATGTGACAGCATATG+AGG 0.531079 3:-92676321 MsG0380017151.01.T01:CDS
GGAAGAAATTGGAAGAGAAA+AGG 0.531132 3:+92673602 None:intergenic
ATGAATCACTATATTGGTGA+TGG 0.531436 3:-92677058 MsG0380017151.01.T01:CDS
GGAAACCAACGATTGTGAAA+GGG 0.532567 3:+92676938 None:intergenic
AGTAACAACTTGTATGTTAG+CGG 0.536386 3:-92676681 MsG0380017151.01.T01:CDS
TGGGCAGCATGGAAGGTGCA+TGG 0.536391 3:-92676545 MsG0380017151.01.T01:CDS
TATCCAAGTCACTGAGCTAG+TGG 0.536796 3:-92677104 MsG0380017151.01.T01:CDS
TGCCCTTCCCCATACCCTAT+GGG 0.537487 3:+92674066 None:intergenic
TGTTTGCCATTCTCTAACAA+AGG 0.537859 3:-92673551 MsG0380017151.01.T01:CDS
GGGTATGGGTATCGGCACTT+AGG 0.538157 3:-92674091 MsG0380017151.01.T01:CDS
GTTCCATTTGCGGAATACAC+AGG 0.539761 3:+92673781 None:intergenic
CACAATCGTTGGTTTCCAGA+AGG 0.539903 3:-92676932 MsG0380017151.01.T01:CDS
TGACCCAGAGGTACGAAAGA+TGG 0.540305 3:-92676504 MsG0380017151.01.T01:CDS
TTTGGGATGGGCAGCATGGA+AGG 0.543018 3:-92676552 MsG0380017151.01.T01:CDS
TAACCACTCAAAACTGCCAC+TGG 0.548632 3:+92676359 None:intergenic
TATGAGGGACATGAAGGAGG+AGG 0.555088 3:-92676305 MsG0380017151.01.T01:CDS
GGTTATGCAAACAAATGTGA+TGG 0.557612 3:-92676341 MsG0380017151.01.T01:CDS
AAAGTGCGGGTAATGGGTAT+GGG 0.557979 3:-92674105 MsG0380017151.01.T01:intron
CGAAAATATTATAAGTAGGA+GGG 0.558814 3:+92677290 None:intergenic
TTGATTTGAGGAAGAAGATG+GGG 0.561348 3:+92673581 None:intergenic
GTATGGAAATGAATTTGGAA+TGG 0.561756 3:-92676387 MsG0380017151.01.T01:CDS
TAGATTCATTCATGCAACAT+TGG 0.562632 3:-92677239 MsG0380017151.01.T01:CDS
TGCACTCACTGTGTCAACTG+AGG 0.563159 3:+92676607 None:intergenic
AATCTCTCTCTCAGCTTGGG+TGG 0.563254 3:+92676848 None:intergenic
AATGGAATAGAGCAAGAGAG+AGG 0.567357 3:+92677356 None:intergenic
TCTATGAACTATATCCAGAA+AGG 0.569526 3:-92677448 MsG0380017151.01.T01:CDS
TGCATGAATGAATCTAGCTC+CGG 0.570333 3:+92677246 None:intergenic
ATTCTCTAGCAATTCACCTA+CGG 0.570871 3:+92676577 None:intergenic
TCTGAAATATTTCAAGCTCA+AGG 0.572514 3:-92677004 MsG0380017151.01.T01:CDS
GCTAGAGAATGATTTGGGAT+GGG 0.574242 3:-92676564 MsG0380017151.01.T01:CDS
ACGGCGCGTGAGAAGACAGT+AGG 0.580250 3:+92673703 None:intergenic
TCGGCACTTAGGTGCCCATA+GGG 0.580338 3:-92674080 MsG0380017151.01.T01:CDS
TTGTTAGAGAATGGCAAACA+GGG 0.580484 3:+92673554 None:intergenic
TTTCTGGATATAGTTCATAG+AGG 0.580769 3:+92677450 None:intergenic
CGTTGGTTTCCAGAAGGTCA+TGG 0.581351 3:-92676926 MsG0380017151.01.T01:CDS
TTCCATTTGCGGAATACACA+GGG 0.581922 3:+92673782 None:intergenic
ACAGCATATGAGGGACATGA+AGG 0.583593 3:-92676311 MsG0380017151.01.T01:CDS
GTACCCCATCTACTTCAAAA+GGG 0.585527 3:-92676175 MsG0380017151.01.T01:intron
ATGATTTGGGATGGGCAGCA+TGG 0.587560 3:-92676556 MsG0380017151.01.T01:CDS
CGGACAAAATCGATATGACA+AGG 0.587895 3:-92673633 MsG0380017151.01.T01:CDS
AATATGTTATTTGACAACTT+GGG 0.588017 3:-92677485 MsG0380017151.01.T01:CDS
GCCCATACCCATACCCTCGC+GGG 0.590308 3:+92674031 None:intergenic
ATATTTCAAGCTCAAGGTCA+AGG 0.592438 3:-92676998 MsG0380017151.01.T01:CDS
TTAGGTGCCCATAGGGTATG+GGG 0.593208 3:-92674073 MsG0380017151.01.T01:CDS
TATTGCAAAGCTGAAAGCTA+AGG 0.595205 3:-92676804 MsG0380017151.01.T01:CDS
ATCGGCACTTAGGTGCCCAT+AGG 0.596869 3:-92674081 MsG0380017151.01.T01:CDS
CAAGGTCAAGGTCAAGGCCA+AGG 0.597402 3:-92676986 MsG0380017151.01.T01:CDS
AAGTACTCTTGTGGAAGAGG+TGG 0.603445 3:+92676635 None:intergenic
TGAAACACGTTGAATGATAG+GGG 0.603555 3:+92677552 None:intergenic
GGTGTCATGATATCAGATAC+TGG 0.604513 3:+92677211 None:intergenic
AAATCCGGAAAGCATTAACA+GGG 0.606897 3:+92673663 None:intergenic
AAATGCGAACATCATGACCT+TGG 0.608455 3:+92676969 None:intergenic
CTTTAGTGTTGCTGTACCAG+AGG 0.608700 3:-92673498 MsG0380017151.01.T01:CDS
GGTGGTACTAAAGAATCTGA+TGG 0.612457 3:-92673467 MsG0380017151.01.T01:CDS
GTGCCCATAGGGTATGGGGA+AGG 0.613951 3:-92674069 MsG0380017151.01.T01:CDS
ACTAAAATTGTTACCCGCGA+GGG 0.614165 3:-92674044 MsG0380017151.01.T01:intron
CAAGCTCAAGGTCAAGGTCA+AGG 0.616290 3:-92676992 MsG0380017151.01.T01:CDS
TTTGGTTTGACTCTGGAATG+GGG 0.616636 3:+92677506 None:intergenic
GATATAGTTCATAGAGGACA+TGG 0.617037 3:+92677456 None:intergenic
GCGTGAGAAGACAGTAGGGT+GGG 0.621068 3:+92673708 None:intergenic
CAAGTCACTGAGCTAGTGGA+TGG 0.621922 3:-92677100 MsG0380017151.01.T01:CDS
GATTGTAGTAACAATAACTC+CGG 0.623849 3:-92677265 MsG0380017151.01.T01:CDS
GTTATGCAAACAAATGTGAT+GGG 0.628176 3:-92676340 MsG0380017151.01.T01:CDS
ATGAGGGACATGAAGGAGGA+GGG 0.631723 3:-92676304 MsG0380017151.01.T01:CDS
CCACACTACCAGCATCAAAG+TGG 0.631844 3:+92676438 None:intergenic
TTATCAGCACATGTTTGGAG+AGG 0.638377 3:-92676737 MsG0380017151.01.T01:CDS
CGCGTGAGAAGACAGTAGGG+TGG 0.651163 3:+92673707 None:intergenic
CCACTTTGATGCTGGTAGTG+TGG 0.651666 3:-92676438 MsG0380017151.01.T01:CDS
AAAGTAACACTCTACTAGTG+AGG 0.651743 3:+92673732 None:intergenic
GCATATGAGGGACATGAAGG+AGG 0.651988 3:-92676308 MsG0380017151.01.T01:CDS
CGGCGCGTGAGAAGACAGTA+GGG 0.654676 3:+92673704 None:intergenic
ACCAACGATTGTGAAAGGGT+TGG 0.664079 3:+92676942 None:intergenic
TGCCCATACCCATACCCTCG+CGG 0.664103 3:+92674030 None:intergenic
TTGGATAGATAACAACGGCA+TGG 0.667589 3:+92677120 None:intergenic
CACTAAAATTGTTACCCGCG+AGG 0.667973 3:-92674045 MsG0380017151.01.T01:CDS
GGGAATGTGACAGCATATGA+GGG 0.668225 3:-92676320 MsG0380017151.01.T01:CDS
GCAACACTAAAGAGTAGCAA+CGG 0.671875 3:+92673509 None:intergenic
ATTTGGAATGGGGAAACCAG+TGG 0.673938 3:-92676375 MsG0380017151.01.T01:CDS
ATGGAAATGAATTTGGAATG+GGG 0.678734 3:-92676385 MsG0380017151.01.T01:CDS
GAGGTCCCAAAGTACTCTTG+TGG 0.680293 3:+92676626 None:intergenic
AGAAATTGGAAGAGAAAAGG+CGG 0.683451 3:+92673605 None:intergenic
AATCCGGAAAGCATTAACAG+GGG 0.683775 3:+92673664 None:intergenic
AGAGGTATAACTCGTGCTCG+CGG 0.702578 3:-92676719 MsG0380017151.01.T01:CDS
TTGAATGGAAGATTGATCAG+TGG 0.709801 3:+92676902 None:intergenic
TGTTAGAGAATGGCAAACAG+GGG 0.710503 3:+92673555 None:intergenic
ATCATGACGAGATTATAACT+AGG 0.713806 3:-92676877 MsG0380017151.01.T01:CDS
TGGCAATGATAAGTTCACCA+AGG 0.714004 3:-92676418 MsG0380017151.01.T01:CDS
GTACCAGAGGAACTTACTGG+TGG 0.717361 3:-92673485 MsG0380017151.01.T01:CDS
GGACAAAATCGATATGACAA+GGG 0.724516 3:-92673632 MsG0380017151.01.T01:CDS
AATAAAGCAATCAATCACGA+CGG 0.729010 3:-92677148 MsG0380017151.01.T01:CDS
AGCAAACCATGATGACCCAG+AGG 0.741285 3:-92676516 MsG0380017151.01.T01:CDS
GTGACTTGGATAGATAACAA+CGG 0.742107 3:+92677115 None:intergenic
CATTTGCGGAATACACAGGG+TGG 0.744722 3:+92673785 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAATAATATAATAA+GGG + Chr3:92677181-92677200 None:intergenic 0.0%
!! TAAAAAATAATAATATAATA+AGG + Chr3:92677182-92677201 None:intergenic 0.0%
!!! ATAAATATTTTATTTATTTT+TGG - Chr3:92676570-92676589 MsG0380017151.01.T01:CDS 0.0%
!! ATAAAAAAAATTCAATGAAA+TGG + Chr3:92675287-92675306 None:intergenic 10.0%
!! GATATTTCATATTAAAAAAA+AGG + Chr3:92674969-92674988 None:intergenic 10.0%
!!! AAAATTACTATATTTTTGTA+CGG + Chr3:92677045-92677064 None:intergenic 10.0%
!!! TTTAGAATTAATTTGATAAT+CGG - Chr3:92675601-92675620 MsG0380017151.01.T01:intron 10.0%
!! AAATGGTACTATTATTATTA+GGG - Chr3:92676359-92676378 MsG0380017151.01.T01:CDS 15.0%
!! AATAAAAAATTCAGATAAGT+TGG - Chr3:92675312-92675331 MsG0380017151.01.T01:intron 15.0%
!! AATTACACCTTAATTATATA+TGG - Chr3:92675924-92675943 MsG0380017151.01.T01:intron 15.0%
!! ATTATATAAATATGCATATG+CGG + Chr3:92676547-92676566 None:intergenic 15.0%
!! CAAAAAATGTCAAAAAATTT+AGG - Chr3:92675697-92675716 MsG0380017151.01.T01:intron 15.0%
!! CACATAATTAAATTTACAAA+TGG - Chr3:92675135-92675154 MsG0380017151.01.T01:intron 15.0%
!! CATTTGTAAATTTAATTATG+TGG + Chr3:92675137-92675156 None:intergenic 15.0%
!! TAAATGGTACTATTATTATT+AGG - Chr3:92676358-92676377 MsG0380017151.01.T01:CDS 15.0%
!! TTATCATGAAGTAAATAAAT+GGG + Chr3:92676065-92676084 None:intergenic 15.0%
!!! ATTTTGCATGTTTTTTTATT+TGG - Chr3:92676782-92676801 MsG0380017151.01.T01:CDS 15.0%
!! AAGTTGTCAAATAACATATT+TGG + Chr3:92673525-92673544 None:intergenic 20.0%
!! ACCTAAACCTAAAAATAATA+CGG - Chr3:92676631-92676650 MsG0380017151.01.T01:CDS 20.0%
!! ATTACATGTGTAATATAAAG+TGG - Chr3:92675975-92675994 MsG0380017151.01.T01:intron 20.0%
!! ATTGGAATTTCTTTAATACA+TGG - Chr3:92673983-92674002 MsG0380017151.01.T01:intron 20.0%
!! ATTGTTCACAATAGTTTAAT+TGG - Chr3:92675662-92675681 MsG0380017151.01.T01:intron 20.0%
!! CATATAATACACCAAAAATA+TGG + Chr3:92674900-92674919 None:intergenic 20.0%
!! CTTATCATGAAGTAAATAAA+TGG + Chr3:92676066-92676085 None:intergenic 20.0%
!! TAAATCATAAATTTGTAGCT+CGG + Chr3:92676687-92676706 None:intergenic 20.0%
!! TCAACGAAAATATTATAAGT+AGG + Chr3:92673727-92673746 None:intergenic 20.0%
!! TTATATAAATATGCATATGC+GGG + Chr3:92676546-92676565 None:intergenic 20.0%
!! TTATATAATACTTTGGATCA+AGG + Chr3:92675392-92675411 None:intergenic 20.0%
!! TTGATATGTTTAAAAAGACA+TGG + Chr3:92674931-92674950 None:intergenic 20.0%
!!! AAATATGTTATTTGACAACT+TGG - Chr3:92673524-92673543 MsG0380017151.01.T01:CDS 20.0%
!!! AAATTTCATTGATGATCTTT+TGG - Chr3:92673615-92673634 MsG0380017151.01.T01:CDS 20.0%
!!! AATATGTTATTTGACAACTT+GGG - Chr3:92673525-92673544 MsG0380017151.01.T01:CDS 20.0%
!!! AATTTTATTTCTCATCTGAT+GGG - Chr3:92675410-92675429 MsG0380017151.01.T01:intron 20.0%
!!! ATAGAAACGTGTATTTTAAA+AGG - Chr3:92674860-92674879 MsG0380017151.01.T01:intron 20.0%
!!! ATGAAATTTTGTTGGTTATT+TGG + Chr3:92673604-92673623 None:intergenic 20.0%
!!! ATTTCTACTATTTTACAAGT+TGG - Chr3:92676817-92676836 MsG0380017151.01.T01:CDS 20.0%
!!! CAAGTTGGTTTAATAAAATT+TGG - Chr3:92676832-92676851 MsG0380017151.01.T01:CDS 20.0%
!!! CTCATATAGCTAATTTTTAT+TGG - Chr3:92675200-92675219 MsG0380017151.01.T01:intron 20.0%
!!! GTAATTTTTACTTATTCAGT+AGG + Chr3:92675960-92675979 None:intergenic 20.0%
!!! GTCTTTTTATAATTAAAGTG+CGG - Chr3:92676891-92676910 MsG0380017151.01.T01:CDS 20.0%
!!! TAATTTTATTTCTCATCTGA+TGG - Chr3:92675409-92675428 MsG0380017151.01.T01:intron 20.0%
!!! TCTTTTTATAATTAAAGTGC+GGG - Chr3:92676892-92676911 MsG0380017151.01.T01:CDS 20.0%
!!! TGAAATTTTGTTGGTTATTT+GGG + Chr3:92673603-92673622 None:intergenic 20.0%
!!! TTAATGTTTCATTTTAGTTC+TGG - Chr3:92675536-92675555 MsG0380017151.01.T01:intron 20.0%
!!! TTATTTGCAATTTCTTCTTT+TGG - Chr3:92677116-92677135 MsG0380017151.01.T01:CDS 20.0%
! AAAAGAAAATAAAATTGCGG+CGG + Chr3:92675870-92675889 None:intergenic 25.0%
! AAACAGAGTAAAAAACTAGT+TGG + Chr3:92675167-92675186 None:intergenic 25.0%
! AAATCATAAATTTGTAGCTC+GGG + Chr3:92676686-92676705 None:intergenic 25.0%
! AACATGTATGGAAATGAATT+TGG - Chr3:92674618-92674637 MsG0380017151.01.T01:intron 25.0%
! AATTACCCACAAATTTAGAT+GGG - Chr3:92676479-92676498 MsG0380017151.01.T01:CDS 25.0%
! ACAGATATAATTAGAGAGAT+TGG + Chr3:92674817-92674836 None:intergenic 25.0%
! ACATAAAGAGATATAGCAAA+AGG + Chr3:92675359-92675378 None:intergenic 25.0%
! ACGAAAATATTATAAGTAGG+AGG + Chr3:92673724-92673743 None:intergenic 25.0%
! CACTACTCCATATATAATTA+AGG + Chr3:92675934-92675953 None:intergenic 25.0%
! CCGAAAAGAAAATAAAATTG+CGG + Chr3:92675873-92675892 None:intergenic 25.0%
! CGAAAATATTATAAGTAGGA+GGG + Chr3:92673723-92673742 None:intergenic 25.0%
! TAATTACCCACAAATTTAGA+TGG - Chr3:92676478-92676497 MsG0380017151.01.T01:CDS 25.0%
! TACTATTTCAGGAAAAAGAT+TGG + Chr3:92676144-92676163 None:intergenic 25.0%
! TGTTCTATGAATCACTATAT+TGG - Chr3:92673946-92673965 MsG0380017151.01.T01:intron 25.0%
! TTAGATTAAGACATGAAAGT+TGG + Chr3:92676094-92676113 None:intergenic 25.0%
! TTATTATTAGGGATGACAAT+TGG - Chr3:92676370-92676389 MsG0380017151.01.T01:CDS 25.0%
!! GATCATCAATGAAATTTTGT+TGG + Chr3:92673612-92673631 None:intergenic 25.0%
!! TATGGAAATGAATTTGGAAT+GGG - Chr3:92674624-92674643 MsG0380017151.01.T01:intron 25.0%
!! TGTTTAAGGCTTAATATCAT+AGG + Chr3:92674552-92674571 None:intergenic 25.0%
!!! AACGTGTATTTTAAAAGGAT+TGG - Chr3:92674865-92674884 MsG0380017151.01.T01:intron 25.0%
!!! AATTTTATTTCTCACCTAGT+GGG - Chr3:92675458-92675477 MsG0380017151.01.T01:intron 25.0%
!!! AATTTTATTTCTCATCTGCT+GGG - Chr3:92675507-92675526 MsG0380017151.01.T01:intron 25.0%
!!! ACCGTATTATTTTTAGGTTT+AGG + Chr3:92676635-92676654 None:intergenic 25.0%
!!! ACGATTACCGTATTATTTTT+AGG + Chr3:92676641-92676660 None:intergenic 25.0%
!!! ACGTGTATTTTAAAAGGATT+GGG - Chr3:92674866-92674885 MsG0380017151.01.T01:intron 25.0%
!!! AGCTAATTTTTATTGGTTGT+TGG - Chr3:92675207-92675226 MsG0380017151.01.T01:intron 25.0%
!!! ATTAATGTTGATTCCTAAAC+AGG - Chr3:92674996-92675015 MsG0380017151.01.T01:intron 25.0%
!!! ATTTTATTTCTCATCTGATG+GGG - Chr3:92675411-92675430 MsG0380017151.01.T01:intron 25.0%
!!! CCGCAATTTTATTTTCTTTT+CGG - Chr3:92675870-92675889 MsG0380017151.01.T01:intron 25.0%
!!! TAATTTTATTTCTCACCTAG+TGG - Chr3:92675457-92675476 MsG0380017151.01.T01:intron 25.0%
!!! TAATTTTATTTCTCATCTGC+TGG - Chr3:92675506-92675525 MsG0380017151.01.T01:intron 25.0%
!!! TATTTGGGTTTTTGAATAAG+AGG + Chr3:92673588-92673607 None:intergenic 25.0%
!!! TATTTTAAAAGGATTGGGAA+GGG - Chr3:92674871-92674890 MsG0380017151.01.T01:intron 25.0%
!!! TTAATGTTGATTCCTAAACA+GGG - Chr3:92674997-92675016 MsG0380017151.01.T01:intron 25.0%
AAAAGATTATCTTCCTAGTC+TGG + Chr3:92675584-92675603 None:intergenic 30.0%
AAACAGCATTCATGAAATTC+TGG + Chr3:92674788-92674807 None:intergenic 30.0%
AACAATGACTTAACAACTGA+TGG + Chr3:92673835-92673854 None:intergenic 30.0%
AATAAAGCAATCAATCACGA+CGG - Chr3:92673862-92673881 MsG0380017151.01.T01:intron 30.0%
ACATACTTAGCTTCTTTGAA+AGG - Chr3:92675789-92675808 MsG0380017151.01.T01:intron 30.0%
ACTTTGATGAGTTGTGAATA+TGG + Chr3:92676029-92676048 None:intergenic 30.0%
AGTAACAACTTGTATGTTAG+CGG - Chr3:92674329-92674348 MsG0380017151.01.T01:intron 30.0%
ATAATTAAAGTGCGGGTAAT+GGG - Chr3:92676899-92676918 MsG0380017151.01.T01:CDS 30.0%
ATCATGACGAGATTATAACT+AGG - Chr3:92674133-92674152 MsG0380017151.01.T01:intron 30.0%
ATGAATCACTATATTGGTGA+TGG - Chr3:92673952-92673971 MsG0380017151.01.T01:intron 30.0%
GAATTGCTAGAGAATGATTT+GGG - Chr3:92674441-92674460 MsG0380017151.01.T01:intron 30.0%
GATTGTAGTAACAATAACTC+CGG - Chr3:92673745-92673764 MsG0380017151.01.T01:CDS 30.0%
GTATGGAAATGAATTTGGAA+TGG - Chr3:92674623-92674642 MsG0380017151.01.T01:intron 30.0%
GTTATGCAAACAAATGTGAT+GGG - Chr3:92674670-92674689 MsG0380017151.01.T01:intron 30.0%
GTTTGTATTAGACTCCATAT+TGG + Chr3:92674232-92674251 None:intergenic 30.0%
TAAATTTGTGGGTAATTACC+CGG + Chr3:92676476-92676495 None:intergenic 30.0%
TAGATTCATTCATGCAACAT+TGG - Chr3:92673771-92673790 MsG0380017151.01.T01:CDS 30.0%
TATAATTAAAGTGCGGGTAA+TGG - Chr3:92676898-92676917 MsG0380017151.01.T01:CDS 30.0%
TCTATGAACTATATCCAGAA+AGG - Chr3:92673562-92673581 MsG0380017151.01.T01:CDS 30.0%
TGAATTGCTAGAGAATGATT+TGG - Chr3:92674440-92674459 MsG0380017151.01.T01:intron 30.0%
TTCCATTTCTATCCTTTATC+TGG - Chr3:92673670-92673689 MsG0380017151.01.T01:CDS 30.0%
TTTCCATACATGTTAAACCT+TGG + Chr3:92674612-92674631 None:intergenic 30.0%
TTTCTGGATATAGTTCATAG+AGG + Chr3:92673563-92673582 None:intergenic 30.0%
! ACAAGTTGTTACTTGATCAT+TGG + Chr3:92674322-92674341 None:intergenic 30.0%
! AGGTGTAATTTTCCTTTTTC+TGG + Chr3:92675914-92675933 None:intergenic 30.0%
! ATGGAAATGAATTTGGAATG+GGG - Chr3:92674625-92674644 MsG0380017151.01.T01:intron 30.0%
! ATTTTCTTTTCGGTAAAGAG+AGG - Chr3:92675880-92675899 MsG0380017151.01.T01:intron 30.0%
! CTTTAAAGACAACAAACCAA+GGG - Chr3:92675247-92675266 MsG0380017151.01.T01:intron 30.0%
! TCTGAAATATTTCAAGCTCA+AGG - Chr3:92674006-92674025 MsG0380017151.01.T01:intron 30.0%
! TCTTTAAAGACAACAAACCA+AGG - Chr3:92675246-92675265 MsG0380017151.01.T01:intron 30.0%
! TTGTTGTCTTTAAAGAGTTG+TGG + Chr3:92675242-92675261 None:intergenic 30.0%
! TTTTCTTTTCGGTAAAGAGA+GGG - Chr3:92675881-92675900 MsG0380017151.01.T01:intron 30.0%
!! ATTTGATTTGAGGAAGAAGA+TGG + Chr3:92677434-92677453 None:intergenic 30.0%
!! ATTTTAAAAGGATTGGGAAG+GGG - Chr3:92674872-92674891 MsG0380017151.01.T01:intron 30.0%
!! ATTTTATTTCTCACCTAGTG+GGG - Chr3:92675459-92675478 MsG0380017151.01.T01:intron 30.0%
!! ATTTTATTTCTCATCTGCTG+GGG - Chr3:92675508-92675527 MsG0380017151.01.T01:intron 30.0%
!! GTATTTTAAAAGGATTGGGA+AGG - Chr3:92674870-92674889 MsG0380017151.01.T01:intron 30.0%
!! TAACATATTTGGTTTGACTC+TGG + Chr3:92673514-92673533 None:intergenic 30.0%
!! TTTGATTTGAGGAAGAAGAT+GGG + Chr3:92677433-92677452 None:intergenic 30.0%
!!! ATAACCCTTTTGAAGTAGAT+GGG + Chr3:92674842-92674861 None:intergenic 30.0%
!!! GGGTTTTTGGAATTTTTGTA+CGG + Chr3:92677329-92677348 None:intergenic 30.0%
!!! TATAACCCTTTTGAAGTAGA+TGG + Chr3:92674843-92674862 None:intergenic 30.0%
!!! TTTGTCCGGATTTTAAAATC+CGG + Chr3:92677365-92677384 None:intergenic 30.0%
AAAGTAACACTCTACTAGTG+AGG + Chr3:92677281-92677300 None:intergenic 35.0%
AAGAAGCTAAGTATGTGTTG+CGG + Chr3:92675785-92675804 None:intergenic 35.0%
ACAAAGCCTTTGTTAGAGAA+TGG + Chr3:92677468-92677487 None:intergenic 35.0%
ACAACTGATGGAACATCAAT+TGG + Chr3:92673823-92673842 None:intergenic 35.0%
AGAAATTGGAAGAGAAAAGG+CGG + Chr3:92677408-92677427 None:intergenic 35.0%
AGAGATATGTACAAAAGCCA+CGG - Chr3:92675723-92675742 MsG0380017151.01.T01:intron 35.0%
AGTACCATTTACTGCAATAC+AGG + Chr3:92676349-92676368 None:intergenic 35.0%
AGTCATTATCAGCACATGTT+TGG - Chr3:92674268-92674287 MsG0380017151.01.T01:intron 35.0%
ATATTTCAAGCTCAAGGTCA+AGG - Chr3:92674012-92674031 MsG0380017151.01.T01:intron 35.0%
ATCTCGTCATGATGTTTGAA+TGG + Chr3:92674126-92674145 None:intergenic 35.0%
ATTCTCTAGCAATTCACCTA+CGG + Chr3:92674436-92674455 None:intergenic 35.0%
CAACATTTACTTTCCAGACT+AGG - Chr3:92675568-92675587 MsG0380017151.01.T01:intron 35.0%
CCACAAATTTAGATGGGTAT+GGG - Chr3:92676485-92676504 MsG0380017151.01.T01:CDS 35.0%
CCATACCCATCTAAATTTGT+GGG + Chr3:92676487-92676506 None:intergenic 35.0%
CTGAAACACGTTGAATGATA+GGG + Chr3:92673462-92673481 None:intergenic 35.0%
CTTAATCTAACTCTAACCAC+CGG - Chr3:92676104-92676123 MsG0380017151.01.T01:intron 35.0%
GAATCTGATGGTTTACTAGT+TGG - Chr3:92677555-92677574 MsG0380017151.01.T01:CDS 35.0%
GACCAGATAAAGGATAGAAA+TGG + Chr3:92673675-92673694 None:intergenic 35.0%
GATATAGTTCATAGAGGACA+TGG + Chr3:92673557-92673576 None:intergenic 35.0%
GGAAGAAATTGGAAGAGAAA+AGG + Chr3:92677411-92677430 None:intergenic 35.0%
GGACAAAATCGATATGACAA+GGG - Chr3:92677378-92677397 MsG0380017151.01.T01:CDS 35.0%
GGTTATGCAAACAAATGTGA+TGG - Chr3:92674669-92674688 MsG0380017151.01.T01:intron 35.0%
GTACCATTTACTGCAATACA+GGG + Chr3:92676348-92676367 None:intergenic 35.0%
TAACACGATAGTTCCATTTG+CGG + Chr3:92677242-92677261 None:intergenic 35.0%
TAAGTTGCTAAAGTGAGGTA+TGG - Chr3:92675062-92675081 MsG0380017151.01.T01:intron 35.0%
TACCATTTACTGCAATACAG+GGG + Chr3:92676347-92676366 None:intergenic 35.0%
TACGAAAGATGGCAAAAAAG+TGG - Chr3:92674517-92674536 MsG0380017151.01.T01:intron 35.0%
TAGTGAGTGTGTGTTTAGTT+AGG - Chr3:92676281-92676300 MsG0380017151.01.T01:CDS 35.0%
TATTGCAAAGCTGAAAGCTA+AGG - Chr3:92674206-92674225 MsG0380017151.01.T01:intron 35.0%
TCACCAAGGTTTAACATGTA+TGG - Chr3:92674606-92674625 MsG0380017151.01.T01:intron 35.0%
TCGGTATGCTCAAAATTAGT+TGG - Chr3:92675620-92675639 MsG0380017151.01.T01:intron 35.0%
TGAAACACGTTGAATGATAG+GGG + Chr3:92673461-92673480 None:intergenic 35.0%
TGTTTGCCATTCTCTAACAA+AGG - Chr3:92677459-92677478 MsG0380017151.01.T01:CDS 35.0%
TTCTTTCTGTAACCCTGTTT+AGG + Chr3:92675012-92675031 None:intergenic 35.0%
TTGAATGGAAGATTGATCAG+TGG + Chr3:92674111-92674130 None:intergenic 35.0%
TTGTTAGAGAATGGCAAACA+GGG + Chr3:92677459-92677478 None:intergenic 35.0%
TTTGCTAAGTTGCTAAAGTG+AGG - Chr3:92675057-92675076 MsG0380017151.01.T01:intron 35.0%
TTTGTTAGAGAATGGCAAAC+AGG + Chr3:92677460-92677479 None:intergenic 35.0%
! GATTAGCATGATCAAGTTGT+AGG - Chr3:92675842-92675861 MsG0380017151.01.T01:intron 35.0%
! GTGACTTGGATAGATAACAA+CGG + Chr3:92673898-92673917 None:intergenic 35.0%
! TCATATATAATTTGTGCCCG+TGG + Chr3:92675743-92675762 None:intergenic 35.0%
! TCTGAAACACGTTGAATGAT+AGG + Chr3:92673463-92673482 None:intergenic 35.0%
! TGGCTTTTGTACATATCTCT+TGG + Chr3:92675723-92675742 None:intergenic 35.0%
! TTGATTTGAGGAAGAAGATG+GGG + Chr3:92677432-92677451 None:intergenic 35.0%
! TTTTGAATAAGAGGCCTTTC+TGG + Chr3:92673579-92673598 None:intergenic 35.0%
!! AAAATCCGGAAAGCATTAAC+AGG + Chr3:92677351-92677370 None:intergenic 35.0%
!! AAACAGGGGTATTTGATTTG+AGG + Chr3:92677444-92677463 None:intergenic 35.0%
!! AAAGCATTAACAGGGGTTTT+TGG + Chr3:92677342-92677361 None:intergenic 35.0%
!! AAATCCGGAAAGCATTAACA+GGG + Chr3:92677350-92677369 None:intergenic 35.0%
!! ATTTGGTTTGACTCTGGAAT+GGG + Chr3:92673508-92673527 None:intergenic 35.0%
!! TATTTGGTTTGACTCTGGAA+TGG + Chr3:92673509-92673528 None:intergenic 35.0%
!! TTGGTGATGGAACTTCTTAT+TGG - Chr3:92673965-92673984 MsG0380017151.01.T01:intron 35.0%
!!! ATTTTTTACAAACGCCGGTA+TGG - Chr3:92677002-92677021 MsG0380017151.01.T01:CDS 35.0%
!!! CTTGTCATATCGATTTTGTC+CGG + Chr3:92677379-92677398 None:intergenic 35.0%
!!! GCTTTCCGGATTTTAAAATC+CGG - Chr3:92677357-92677376 MsG0380017151.01.T01:CDS 35.0%
!!! TAACCCTTTTGAAGTAGATG+GGG + Chr3:92674841-92674860 None:intergenic 35.0%
!!! TTTTTTACAAACGCCGGTAT+GGG - Chr3:92677003-92677022 MsG0380017151.01.T01:CDS 35.0%
AAAAAAAACCCGCAATGGGT+AGG - Chr3:92676416-92676435 MsG0380017151.01.T01:CDS 40.0%
AAAAAAACCCGCAATGGGTA+GGG - Chr3:92676417-92676436 MsG0380017151.01.T01:CDS 40.0%
AAACCCCTGTTAATGCTTTC+CGG - Chr3:92677343-92677362 MsG0380017151.01.T01:CDS 40.0%
AAAGAATCTCTCTCTCAGCT+TGG + Chr3:92674169-92674188 None:intergenic 40.0%
AAATGCGAACATCATGACCT+TGG + Chr3:92674044-92674063 None:intergenic 40.0%
AAGAATCTCTCTCTCAGCTT+GGG + Chr3:92674168-92674187 None:intergenic 40.0%
AATGGAATAGAGCAAGAGAG+AGG + Chr3:92673657-92673676 None:intergenic 40.0%
AATTTAGATGGGTATGGGTG+CGG - Chr3:92676490-92676509 MsG0380017151.01.T01:CDS 40.0%
ACTAAAATTGTTACCCGCGA+GGG - Chr3:92676966-92676985 MsG0380017151.01.T01:CDS 40.0%
ACTAAAGAGTAGCAACGGTT+TGG + Chr3:92677499-92677518 None:intergenic 40.0%
ATGGAATAGAGCAAGAGAGA+GGG + Chr3:92673656-92673675 None:intergenic 40.0%
CAGCATCAAAGTGGTGTTTA+AGG + Chr3:92674566-92674585 None:intergenic 40.0%
CCCACAAATTTAGATGGGTA+TGG - Chr3:92676484-92676503 MsG0380017151.01.T01:CDS 40.0%
CCCATACCCATCTAAATTTG+TGG + Chr3:92676488-92676507 None:intergenic 40.0%
CCTGAAATAGTAGCACTGTT+GGG - Chr3:92676152-92676171 MsG0380017151.01.T01:intron 40.0%
CGGACAAAATCGATATGACA+AGG - Chr3:92677377-92677396 MsG0380017151.01.T01:CDS 40.0%
CTTAAACACCACTTTGATGC+TGG - Chr3:92674564-92674583 MsG0380017151.01.T01:intron 40.0%
GAAGAAGATGGGGAAGAAAT+TGG + Chr3:92677422-92677441 None:intergenic 40.0%
GAGATATGTACAAAAGCCAC+GGG - Chr3:92675724-92675743 MsG0380017151.01.T01:intron 40.0%
GCAACACTAAAGAGTAGCAA+CGG + Chr3:92677504-92677523 None:intergenic 40.0%
GCGTGTCAAAGAAAATTGAG+AGG + Chr3:92676257-92676276 None:intergenic 40.0%
GGAAACCAACGATTGTGAAA+GGG + Chr3:92674075-92674094 None:intergenic 40.0%
GGTGGTACTAAAGAATCTGA+TGG - Chr3:92677543-92677562 MsG0380017151.01.T01:CDS 40.0%
GTAACAAGACGACCAGATAA+AGG + Chr3:92673685-92673704 None:intergenic 40.0%
GTACCCCATCTACTTCAAAA+GGG - Chr3:92674835-92674854 MsG0380017151.01.T01:intron 40.0%
TATAGTAACCTTCCCCATAC+CGG + Chr3:92677019-92677038 None:intergenic 40.0%
TATTTCTCATCTGATGGGGT+TGG - Chr3:92675415-92675434 MsG0380017151.01.T01:intron 40.0%
TCCTGAAATAGTAGCACTGT+TGG - Chr3:92676151-92676170 MsG0380017151.01.T01:intron 40.0%
TCTAGTGCTCTCATCACATT+TGG + Chr3:92674759-92674778 None:intergenic 40.0%
TGGAAACCAACGATTGTGAA+AGG + Chr3:92674076-92674095 None:intergenic 40.0%
TGGCAATGATAAGTTCACCA+AGG - Chr3:92674592-92674611 MsG0380017151.01.T01:intron 40.0%
TGTACCCCATCTACTTCAAA+AGG - Chr3:92674834-92674853 MsG0380017151.01.T01:intron 40.0%
TGTTAGAGAATGGCAAACAG+GGG + Chr3:92677458-92677477 None:intergenic 40.0%
TTATCAGCACATGTTTGGAG+AGG - Chr3:92674273-92674292 MsG0380017151.01.T01:intron 40.0%
TTCCATTTGCGGAATACACA+GGG + Chr3:92677231-92677250 None:intergenic 40.0%
TTGGATAGATAACAACGGCA+TGG + Chr3:92673893-92673912 None:intergenic 40.0%
! AAATATGCATATGCGGGTTG+CGG + Chr3:92676540-92676559 None:intergenic 40.0%
! GCTAGAGAATGATTTGGGAT+GGG - Chr3:92674446-92674465 MsG0380017151.01.T01:intron 40.0%
! GGTGTCATGATATCAGATAC+TGG + Chr3:92673802-92673821 None:intergenic 40.0%
! TGCATGAATGAATCTAGCTC+CGG + Chr3:92673767-92673786 None:intergenic 40.0%
! TGCTAGAGAATGATTTGGGA+TGG - Chr3:92674445-92674464 MsG0380017151.01.T01:intron 40.0%
! TTTTTACAAACGCCGGTATG+GGG - Chr3:92677004-92677023 MsG0380017151.01.T01:CDS 40.0%
!! AAACCTCGCTTTTATGGGTA+TGG - Chr3:92676442-92676461 MsG0380017151.01.T01:CDS 40.0%
!! AACCTCGCTTTTATGGGTAT+GGG - Chr3:92676443-92676462 MsG0380017151.01.T01:CDS 40.0%
!! AATCCGGAAAGCATTAACAG+GGG + Chr3:92677349-92677368 None:intergenic 40.0%
!! AGGGTAAAACCTCGCTTTTA+TGG - Chr3:92676436-92676455 MsG0380017151.01.T01:CDS 40.0%
!! CTAGTGGATGGTGTTTTCAT+AGG - Chr3:92673922-92673941 MsG0380017151.01.T01:intron 40.0%
!! CTCTTCCACAAGAGTACTTT+GGG - Chr3:92674379-92674398 MsG0380017151.01.T01:intron 40.0%
!! GGGTAAAACCTCGCTTTTAT+GGG - Chr3:92676437-92676456 MsG0380017151.01.T01:CDS 40.0%
!! TGTGATGAGAGCACTAGAAT+TGG - Chr3:92674761-92674780 MsG0380017151.01.T01:intron 40.0%
!! TTTGGTTTGACTCTGGAATG+GGG + Chr3:92673507-92673526 None:intergenic 40.0%
!!! TGGGCATTTTTTACAAACGC+CGG - Chr3:92676997-92677016 MsG0380017151.01.T01:CDS 40.0%
AAGTACTCTTGTGGAAGAGG+TGG + Chr3:92674378-92674397 None:intergenic 45.0%
ACAGCATATGAGGGACATGA+AGG - Chr3:92674699-92674718 MsG0380017151.01.T01:intron 45.0%
ACCAACGATTGTGAAAGGGT+TGG + Chr3:92674071-92674090 None:intergenic 45.0%
ATGTCAAACGAAACCCCACT+AGG + Chr3:92675475-92675494 None:intergenic 45.0%
ATTTAGATGGGTATGGGTGC+GGG - Chr3:92676491-92676510 MsG0380017151.01.T01:CDS 45.0%
CACCCCTGTATTGCAGTAAA+TGG - Chr3:92676342-92676361 MsG0380017151.01.T01:CDS 45.0%
CACTAAAATTGTTACCCGCG+AGG - Chr3:92676965-92676984 MsG0380017151.01.T01:CDS 45.0%
CATTTACTGCAATACAGGGG+TGG + Chr3:92676344-92676363 None:intergenic 45.0%
CCGCAAAAAAAACCCGCAAT+GGG - Chr3:92676412-92676431 MsG0380017151.01.T01:CDS 45.0%
CTCGGGAGCTTATGAAAGTA+AGG + Chr3:92676669-92676688 None:intergenic 45.0%
GAGGGTGAAAGTCCAGAAAA+AGG - Chr3:92675899-92675918 MsG0380017151.01.T01:intron 45.0%
GCTGAAAGCTAAGGCCAATA+TGG - Chr3:92674215-92674234 MsG0380017151.01.T01:intron 45.0%
GGAAGAGGTGGTTTCATTCT+CGG + Chr3:92674366-92674385 None:intergenic 45.0%
GGCATGTAAAAGAAGACCCT+TGG + Chr3:92675266-92675285 None:intergenic 45.0%
GGGAATGTGACAGCATATGA+GGG - Chr3:92674690-92674709 MsG0380017151.01.T01:intron 45.0%
GGGTGGTTTCGTTTAGTGAT+GGG + Chr3:92676327-92676346 None:intergenic 45.0%
GTATGTGTTGCGGTCAAACT+TGG + Chr3:92675775-92675794 None:intergenic 45.0%
GTCATGTTAACCAGTGCTTC+CGG + Chr3:92677159-92677178 None:intergenic 45.0%
GTGAGTGCAAAAACAACCGT+AGG - Chr3:92674417-92674436 MsG0380017151.01.T01:intron 45.0%
GTTCCATTTGCGGAATACAC+AGG + Chr3:92677232-92677251 None:intergenic 45.0%
TAACCACTCAAAACTGCCAC+TGG + Chr3:92674654-92674673 None:intergenic 45.0%
TATCCAAGTCACTGAGCTAG+TGG - Chr3:92673906-92673925 MsG0380017151.01.T01:intron 45.0%
TATTTCTCATCTGCTGGGGT+TGG - Chr3:92675512-92675531 MsG0380017151.01.T01:intron 45.0%
TCATGTTAACCAGTGCTTCC+GGG + Chr3:92677158-92677177 None:intergenic 45.0%
TGGGAATGTGACAGCATATG+AGG - Chr3:92674689-92674708 MsG0380017151.01.T01:intron 45.0%
TTGCCATCTTTCGTACCTCT+GGG + Chr3:92674512-92674531 None:intergenic 45.0%
TTTGCCATCTTTCGTACCTC+TGG + Chr3:92674513-92674532 None:intergenic 45.0%
! AATATGCATATGCGGGTTGC+GGG + Chr3:92676539-92676558 None:intergenic 45.0%
! AGGTTTTACCCTACCCATTG+CGG + Chr3:92676428-92676447 None:intergenic 45.0%
! ATTTGGAATGGGGAAACCAG+TGG - Chr3:92674635-92674654 MsG0380017151.01.T01:intron 45.0%
! CCAAAGTACTCTTGTGGAAG+AGG + Chr3:92674381-92674400 None:intergenic 45.0%
! CCCAACAGTGCTACTATTTC+AGG + Chr3:92676155-92676174 None:intergenic 45.0%
! CTTTAGTGTTGCTGTACCAG+AGG - Chr3:92677512-92677531 MsG0380017151.01.T01:CDS 45.0%
! GCTTTTATGGGTATGGGCTT+GGG - Chr3:92676449-92676468 MsG0380017151.01.T01:CDS 45.0%
! GGGAAGGGGTTCCATATTTT+TGG - Chr3:92674886-92674905 MsG0380017151.01.T01:intron 45.0%
!! AAAGTGCGGGTAATGGGTAT+GGG - Chr3:92676905-92676924 MsG0380017151.01.T01:CDS 45.0%
!! CACAATCGTTGGTTTCCAGA+AGG - Chr3:92674078-92674097 MsG0380017151.01.T01:CDS 45.0%
!! CAGGAAAAAGATTGGTGACG+AGG + Chr3:92676136-92676155 None:intergenic 45.0%
!! CCTCTTCCACAAGAGTACTT+TGG - Chr3:92674378-92674397 MsG0380017151.01.T01:intron 45.0%
!! TAAAGTGCGGGTAATGGGTA+TGG - Chr3:92676904-92676923 MsG0380017151.01.T01:CDS 45.0%
!!! AAACCAGTGGCAGTTTTGAG+TGG - Chr3:92674648-92674667 MsG0380017151.01.T01:intron 45.0%
!!! CCATTGCGGGTTTTTTTTGC+GGG + Chr3:92676414-92676433 None:intergenic 45.0%
!!! CCCATTGCGGGTTTTTTTTG+CGG + Chr3:92676415-92676434 None:intergenic 45.0%
!! AATAAAATTATATAATACTT+TGG + Chr3:92675399-92675418 None:intergenic 5.0%
!!! TTAATATAAATTGATTTTAA+TGG - Chr3:92677199-92677218 MsG0380017151.01.T01:CDS 5.0%
AATCTCTCTCTCAGCTTGGG+TGG + Chr3:92674165-92674184 None:intergenic 50.0%
AATTGTTACCCGCGAGGGTA+TGG - Chr3:92676971-92676990 MsG0380017151.01.T01:CDS 50.0%
ACTTAGGTGCCCATAGGGTA+TGG - Chr3:92676935-92676954 MsG0380017151.01.T01:CDS 50.0%
AGCAAACCATGATGACCCAG+AGG - Chr3:92674494-92674513 MsG0380017151.01.T01:intron 50.0%
AGCCCATACCCATAAAAGCG+AGG + Chr3:92676448-92676467 None:intergenic 50.0%
ATCAGTGGACCATGACCTTC+TGG + Chr3:92674096-92674115 None:intergenic 50.0%
ATGAGGGACATGAAGGAGGA+GGG - Chr3:92674706-92674725 MsG0380017151.01.T01:intron 50.0%
CAAGCTCAAGGTCAAGGTCA+AGG - Chr3:92674018-92674037 MsG0380017151.01.T01:intron 50.0%
CAAGTCACTGAGCTAGTGGA+TGG - Chr3:92673910-92673929 MsG0380017151.01.T01:intron 50.0%
CACCCTGTGTATTCCGCAAA+TGG - Chr3:92677226-92677245 MsG0380017151.01.T01:CDS 50.0%
CATCCACTAGCTCAGTGACT+TGG + Chr3:92673912-92673931 None:intergenic 50.0%
CATTTGCGGAATACACAGGG+TGG + Chr3:92677228-92677247 None:intergenic 50.0%
CCACACTACCAGCATCAAAG+TGG + Chr3:92674575-92674594 None:intergenic 50.0%
CCCGCAAAAAAAACCCGCAA+TGG - Chr3:92676411-92676430 MsG0380017151.01.T01:CDS 50.0%
CTTAGGTGCCCATAGGGTAT+GGG - Chr3:92676936-92676955 MsG0380017151.01.T01:CDS 50.0%
GCATATGAGGGACATGAAGG+AGG - Chr3:92674702-92674721 MsG0380017151.01.T01:intron 50.0%
GCCAACCCTTTCACAATCGT+TGG - Chr3:92674067-92674086 MsG0380017151.01.T01:CDS 50.0%
GCTGTACCAGAGGAACTTAC+TGG - Chr3:92677522-92677541 MsG0380017151.01.T01:CDS 50.0%
GGGGTGGTTTCGTTTAGTGA+TGG + Chr3:92676328-92676347 None:intergenic 50.0%
GGTTTCCTTAACCAGTGTCC+CGG - Chr3:92677137-92677156 MsG0380017151.01.T01:CDS 50.0%
GTACCACCAGTAAGTTCCTC+TGG + Chr3:92677531-92677550 None:intergenic 50.0%
GTACCAGAGGAACTTACTGG+TGG - Chr3:92677525-92677544 MsG0380017151.01.T01:CDS 50.0%
TAGGGATGACAATTGGACCC+AGG - Chr3:92676377-92676396 MsG0380017151.01.T01:CDS 50.0%
TATGAGGGACATGAAGGAGG+AGG - Chr3:92674705-92674724 MsG0380017151.01.T01:intron 50.0%
TGCACTCACTGTGTCAACTG+AGG + Chr3:92674406-92674425 None:intergenic 50.0%
TTAGGTGCCCATAGGGTATG+GGG - Chr3:92676937-92676956 MsG0380017151.01.T01:CDS 50.0%
TTCGTACCTCTGGGTCATCA+TGG + Chr3:92674503-92674522 None:intergenic 50.0%
! AGAGGTATAACTCGTGCTCG+CGG - Chr3:92674291-92674310 MsG0380017151.01.T01:intron 50.0%
! ATGATTTGGGATGGGCAGCA+TGG - Chr3:92674454-92674473 MsG0380017151.01.T01:intron 50.0%
! ATTGTTACCCGCGAGGGTAT+GGG - Chr3:92676972-92676991 MsG0380017151.01.T01:CDS 50.0%
! CCACTTTGATGCTGGTAGTG+TGG - Chr3:92674572-92674591 MsG0380017151.01.T01:intron 50.0%
! CGCTTTTATGGGTATGGGCT+TGG - Chr3:92676448-92676467 MsG0380017151.01.T01:CDS 50.0%
! GAGGTCCCAAAGTACTCTTG+TGG + Chr3:92674387-92674406 None:intergenic 50.0%
! GGTTTTACCCTACCCATTGC+GGG + Chr3:92676427-92676446 None:intergenic 50.0%
! TGACCCAGAGGTACGAAAGA+TGG - Chr3:92674506-92674525 MsG0380017151.01.T01:intron 50.0%
!! ATTGGTGACGAGGATCGTTC+CGG + Chr3:92676126-92676145 None:intergenic 50.0%
!! CGGGTAATGGGTATGGGTAT+CGG - Chr3:92676911-92676930 MsG0380017151.01.T01:CDS 50.0%
!! CGTTGGTTTCCAGAAGGTCA+TGG - Chr3:92674084-92674103 MsG0380017151.01.T01:CDS 50.0%
!! GTAAGGGCACTATACTACCC+AGG - Chr3:92676513-92676532 MsG0380017151.01.T01:CDS 50.0%
ACAATTGGACCCAGGCTCGA+TGG - Chr3:92676385-92676404 MsG0380017151.01.T01:CDS 55.0%
ACATGAAGGAGGAGGGAGCA+TGG - Chr3:92674713-92674732 MsG0380017151.01.T01:intron 55.0%
ATCGGCACTTAGGTGCCCAT+AGG - Chr3:92676929-92676948 MsG0380017151.01.T01:CDS 55.0%
ATGGGTATGGGTGCGGGTAA+GGG - Chr3:92676497-92676516 MsG0380017151.01.T01:CDS 55.0%
CAAGGTCAAGGTCAAGGCCA+AGG - Chr3:92674024-92674043 MsG0380017151.01.T01:intron 55.0%
CAATTGGACCCAGGCTCGAT+GGG - Chr3:92676386-92676405 MsG0380017151.01.T01:CDS 55.0%
GCGTGAGAAGACAGTAGGGT+GGG + Chr3:92677305-92677324 None:intergenic 55.0%
TACAAACGCCGGTATGGGGA+AGG - Chr3:92677008-92677027 MsG0380017151.01.T01:CDS 55.0%
TATGGGTATGGGCTTGGGTC+CGG - Chr3:92676454-92676473 MsG0380017151.01.T01:CDS 55.0%
TCGGCACTTAGGTGCCCATA+GGG - Chr3:92676930-92676949 MsG0380017151.01.T01:CDS 55.0%
TGCCCATAGGGTATGGGGAA+GGG - Chr3:92676942-92676961 MsG0380017151.01.T01:CDS 55.0%
TGCCCTTCCCCATACCCTAT+GGG + Chr3:92676947-92676966 None:intergenic 55.0%
! AGGAGGAGGGAGCATGGATT+TGG - Chr3:92674719-92674738 MsG0380017151.01.T01:intron 55.0%
! TGCTTCCGGGACACTGGTTA+AGG + Chr3:92677145-92677164 None:intergenic 55.0%
! TTTGGGATGGGCAGCATGGA+AGG - Chr3:92674458-92674477 MsG0380017151.01.T01:intron 55.0%
!! GACTCTGGAATGGGGTGTAG+AGG + Chr3:92673499-92673518 None:intergenic 55.0%
!! GGGTATGGGTATCGGCACTT+AGG - Chr3:92676919-92676938 MsG0380017151.01.T01:CDS 55.0%
AACCAGTGCTTCCGGGACAC+TGG + Chr3:92677151-92677170 None:intergenic 60.0%
ACGGCGCGTGAGAAGACAGT+AGG + Chr3:92677310-92677329 None:intergenic 60.0%
ATGGGTATGGGCTTGGGTCC+GGG - Chr3:92676455-92676474 MsG0380017151.01.T01:CDS 60.0%
CGCGTGAGAAGACAGTAGGG+TGG + Chr3:92677306-92677325 None:intergenic 60.0%
CGGCGCGTGAGAAGACAGTA+GGG + Chr3:92677309-92677328 None:intergenic 60.0%
GATGGGTATGGGTGCGGGTA+AGG - Chr3:92676496-92676515 MsG0380017151.01.T01:CDS 60.0%
GTGCCCATAGGGTATGGGGA+AGG - Chr3:92676941-92676960 MsG0380017151.01.T01:CDS 60.0%
GTGCCCTTCCCCATACCCTA+TGG + Chr3:92676948-92676967 None:intergenic 60.0%
TGCCCATACCCATACCCTCG+CGG + Chr3:92676983-92677002 None:intergenic 60.0%
! AACCAGTGTCCCGGAAGCAC+TGG - Chr3:92677146-92677165 MsG0380017151.01.T01:CDS 60.0%
! ACCCGCGAGGGTATGGGTAT+GGG - Chr3:92676978-92676997 MsG0380017151.01.T01:CDS 60.0%
! TACCCGCGAGGGTATGGGTA+TGG - Chr3:92676977-92676996 MsG0380017151.01.T01:CDS 60.0%
! TGGGCAGCATGGAAGGTGCA+TGG - Chr3:92674465-92674484 MsG0380017151.01.T01:intron 60.0%
GCCCATACCCATACCCTCGC+GGG + Chr3:92676982-92677001 None:intergenic 65.0%
GGTGACGAGGATCGTTCCGG+TGG + Chr3:92676123-92676142 None:intergenic 65.0%
! CATATGCGGGTTGCGGGCCT+GGG + Chr3:92676533-92676552 None:intergenic 65.0%
TGCGGGTGCCCATCGAGCCT+GGG + Chr3:92676397-92676416 None:intergenic 70.0%
TTGCGGGTGCCCATCGAGCC+TGG + Chr3:92676398-92676417 None:intergenic 70.0%
! GCATATGCGGGTTGCGGGCC+TGG + Chr3:92676534-92676553 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 92673448 92677584 92673448 ID=MsG0380017151.01;Name=MsG0380017151.01
Chr3 mRNA 92673448 92677584 92673448 ID=MsG0380017151.01.T01;Parent=MsG0380017151.01;Name=MsG0380017151.01.T01;_AED=0.60;_eAED=0.60;_QI=0|0|0|0.33|0.5|1|3|0|615
Chr3 exon 92676176 92677584 92676176 ID=MsG0380017151.01.T01:exon:15713;Parent=MsG0380017151.01.T01
Chr3 exon 92674045 92674123 92674045 ID=MsG0380017151.01.T01:exon:15712;Parent=MsG0380017151.01.T01
Chr3 exon 92673448 92673807 92673448 ID=MsG0380017151.01.T01:exon:15711;Parent=MsG0380017151.01.T01
Chr3 CDS 92676176 92677584 92676176 ID=MsG0380017151.01.T01:cds;Parent=MsG0380017151.01.T01
Chr3 CDS 92674045 92674123 92674045 ID=MsG0380017151.01.T01:cds;Parent=MsG0380017151.01.T01
Chr3 CDS 92673448 92673807 92673448 ID=MsG0380017151.01.T01:cds;Parent=MsG0380017151.01.T01
Gene Sequence

>MsG0380017151.01.T01

ATGATGACTTCCCCTATCATTCAACGTGTTTCAGAATGTTTTATCAAACCTCTACACCCCATTCCAGAGTCAAACCAAATATGTTATTTGACAACTTGGGATATTGCCATGTCCTCTATGAACTATATCCAGAAAGGCCTCTTATTCAAAAACCCAAATAACCAACAAAATTTCATTGATGATCTTTTGGAGAAGCTCAAACACTCCCTCTCTCTTGCTCTATTCCATTTCTATCCTTTATCTGGTCGTCTTGTTACACAAAAATCTCAAGACCCTCCTACTTATAATATTTTCGTTGATTGTAGTAACAATAACTCCGGAGCTAGATTCATTCATGCAACATTGGATGCACCAGTATCTGATATCATGACACCAATTGATGTTCCATCAGTTGTTAAGTCATTGTTTGATCTCAATAAAGCAATCAATCACGACGGTCACACCATGCCGTTGTTATCTATCCAAGTCACTGAGCTAGTGGATGGTGTTTTCATAGGTTGTTCTATGAATCACTATATTGGTGATGGAACTTCTTATTGGAATTTCTTTAATACATGGTCTGAAATATTTCAAGCTCAAGGTCAAGGTCAAGGCCAAGGTCATGATGTTCGCATTTCACGCCAACCCTTTCACAATCGTTGGTTTCCAGAAGGTCATGGTCCACTGATCAATCTTCCATTCAAACATCATGACGAGATTATAACTAGGTATGAACCACCCAAGCTGAGAGAGAGATTCTTTCATTTTACAGCAGAGTCTATTGCAAAGCTGAAAGCTAAGGCCAATATGGAGTCTAATACAAACAAAATCTCTTCATTTCAGTCATTATCAGCACATGTTTGGAGAGGTATAACTCGTGCTCGCGGCTTAACCAATGATCAAGTAACAACTTGTATGTTAGCGGTAAATAATCGACCGAGAATGAAACCACCTCTTCCACAAGAGTACTTTGGGACCTCAGTTGACACAGTGAGTGCAAAAACAACCGTAGGTGAATTGCTAGAGAATGATTTGGGATGGGCAGCATGGAAGGTGCATGGTGCTGTAGCAAACCATGATGACCCAGAGGTACGAAAGATGGCAAAAAAGTGGTTAGAGTCTCCTATGATATTAAGCCTTAAACACCACTTTGATGCTGGTAGTGTGGCAATGATAAGTTCACCAAGGTTTAACATGTATGGAAATGAATTTGGAATGGGGAAACCAGTGGCAGTTTTGAGTGGTTATGCAAACAAATGTGATGGGAATGTGACAGCATATGAGGGACATGAAGGAGGAGGGAGCATGGATTTGGAAATTTCTCTTTCTCCAAATGTGATGAGAGCACTAGAATTGGACCAGAATTTCATGAATGCTGTTTCTGTGACCAATCTCTCTAATTATATCTGTACCCCATCTACTTCAAAAGGTGCGGGTAATGGGTATGGGTATCGGCACTTAGGTGCCCATAGGGTATGGGGAAGGGCACTAAAATTGTTACCCGCGAGGCCACCCTGTGTATTCCGCAAATGGAACTATCGTGTTATTGTGCAAGTGAAGTGCCTCACTAGTAGAGTGTTACTTTTCCCACCCTACTGTCTTCTCACGCGCCGTACAAAAATTCCAAAAACCCCTGTTAATGCTTTCCGGATTTTAAAATCCGGACAAAATCGATATGACAAGGGTCTGCCGCCTTTTCTCTTCCAATTTCTTCCCCATCTTCTTCCTCAAATCAAATACCCCTGTTTGCCATTCTCTAACAAAGGCTTTGTAAGATCTTCCAAACCGTTGCTACTCTTTAGTGTTGCTGTACCAGAGGAACTTACTGGTGGTACTAAAGAATCTGATGGTTTACTAGTTGGTGTTTGA

Protein sequence

>MsG0380017151.01.T01

MMTSPIIQRVSECFIKPLHPIPESNQICYLTTWDIAMSSMNYIQKGLLFKNPNNQQNFIDDLLEKLKHSLSLALFHFYPLSGRLVTQKSQDPPTYNIFVDCSNNNSGARFIHATLDAPVSDIMTPIDVPSVVKSLFDLNKAINHDGHTMPLLSIQVTELVDGVFIGCSMNHYIGDGTSYWNFFNTWSEIFQAQGQGQGQGHDVRISRQPFHNRWFPEGHGPLINLPFKHHDEIITRYEPPKLRERFFHFTAESIAKLKAKANMESNTNKISSFQSLSAHVWRGITRARGLTNDQVTTCMLAVNNRPRMKPPLPQEYFGTSVDTVSAKTTVGELLENDLGWAAWKVHGAVANHDDPEVRKMAKKWLESPMILSLKHHFDAGSVAMISSPRFNMYGNEFGMGKPVAVLSGYANKCDGNVTAYEGHEGGGSMDLEISLSPNVMRALELDQNFMNAVSVTNLSNYICTPSTSKGAGNGYGYRHLGAHRVWGRALKLLPARPPCVFRKWNYRVIVQVKCLTSRVLLFPPYCLLTRRTKIPKTPVNAFRILKSGQNRYDKGLPPFLFQFLPHLLPQIKYPCLPFSNKGFVRSSKPLLLFSVAVPEELTGGTKESDGLLVGV*