Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048866.01.T01 | XP_013467613.1 | 99.14 | 465 | 4 | 0 | 1 | 465 | 1 | 465 | 0 | 954 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048866.01.T01 | Q94CD1 | 34.382 | 445 | 262 | 15 | 24 | 458 | 31 | 455 | 4.12E-72 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048866.01.T01 | A0A072VU57 | 99.140 | 465 | 4 | 0 | 1 | 465 | 1 | 465 | 0.0 | 954 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0080048866.01 | MsG0180001633.01 | PPI |
| MsG0080048866.01 | MsG0180001630.01 | PPI |
| MsG0080048866.01 | MsG0180001619.01 | PPI |
| MsG0080048866.01 | MsG0780041614.01 | PPI |
| MsG0080048866.01 | MsG0780041615.01 | PPI |
| MsG0080048866.01 | MsG0180001626.01 | PPI |
| MsG0080048866.01 | MsG0180001620.01 | PPI |
| MsG0080048866.01 | MsG0780037094.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048866.01.T01 | MTR_1g053315 | 99.140 | 465 | 4 | 0 | 1 | 465 | 1 | 465 | 0.0 | 954 |
| MsG0080048866.01.T01 | MTR_3g098980 | 35.477 | 451 | 262 | 16 | 18 | 460 | 6 | 435 | 6.14e-83 | 263 |
| MsG0080048866.01.T01 | MTR_7g027175 | 35.354 | 396 | 232 | 15 | 41 | 431 | 36 | 412 | 8.47e-71 | 231 |
| MsG0080048866.01.T01 | MTR_8g096530 | 33.925 | 451 | 260 | 16 | 22 | 459 | 3 | 428 | 7.88e-68 | 224 |
| MsG0080048866.01.T01 | MTR_3g112180 | 35.000 | 440 | 245 | 17 | 25 | 453 | 19 | 428 | 8.49e-64 | 213 |
| MsG0080048866.01.T01 | MTR_5g076700 | 30.664 | 437 | 285 | 12 | 31 | 463 | 20 | 442 | 3.06e-59 | 201 |
| MsG0080048866.01.T01 | MTR_4g007540 | 31.416 | 452 | 273 | 18 | 20 | 457 | 2 | 430 | 9.33e-58 | 197 |
| MsG0080048866.01.T01 | MTR_8g075610 | 31.849 | 449 | 261 | 20 | 26 | 460 | 2 | 419 | 1.41e-57 | 196 |
| MsG0080048866.01.T01 | MTR_2g064495 | 30.599 | 451 | 273 | 18 | 20 | 455 | 2 | 427 | 5.59e-57 | 194 |
| MsG0080048866.01.T01 | MTR_2g105330 | 30.377 | 451 | 274 | 18 | 20 | 455 | 2 | 427 | 1.53e-55 | 191 |
| MsG0080048866.01.T01 | MTR_1g081660 | 30.324 | 432 | 281 | 13 | 31 | 457 | 28 | 444 | 6.61e-55 | 190 |
| MsG0080048866.01.T01 | MTR_7g114470 | 29.864 | 442 | 290 | 12 | 26 | 463 | 19 | 444 | 9.22e-55 | 189 |
| MsG0080048866.01.T01 | MTR_7g114490 | 31.591 | 440 | 277 | 14 | 24 | 453 | 8 | 433 | 1.93e-54 | 190 |
| MsG0080048866.01.T01 | MTR_3g049150 | 30.067 | 449 | 270 | 16 | 18 | 443 | 2 | 429 | 4.11e-54 | 187 |
| MsG0080048866.01.T01 | MTR_7g114520 | 29.977 | 437 | 286 | 13 | 26 | 457 | 19 | 440 | 5.76e-54 | 187 |
| MsG0080048866.01.T01 | MTR_7g114560 | 30.023 | 443 | 286 | 15 | 26 | 463 | 18 | 441 | 1.44e-51 | 181 |
| MsG0080048866.01.T01 | MTR_7g114550 | 30.856 | 444 | 281 | 16 | 26 | 463 | 18 | 441 | 2.88e-51 | 180 |
| MsG0080048866.01.T01 | MTR_1g040175 | 31.362 | 389 | 251 | 10 | 26 | 413 | 17 | 390 | 1.56e-50 | 178 |
| MsG0080048866.01.T01 | MTR_7g084940 | 28.953 | 449 | 286 | 14 | 14 | 453 | 12 | 436 | 5.39e-50 | 176 |
| MsG0080048866.01.T01 | MTR_1g040215 | 31.378 | 392 | 249 | 11 | 26 | 414 | 17 | 391 | 1.86e-49 | 175 |
| MsG0080048866.01.T01 | MTR_4g055170 | 29.464 | 448 | 285 | 17 | 26 | 457 | 20 | 452 | 6.13e-49 | 174 |
| MsG0080048866.01.T01 | MTR_3g071320 | 32.321 | 461 | 258 | 23 | 18 | 457 | 5 | 432 | 7.59e-49 | 173 |
| MsG0080048866.01.T01 | MTR_4g127650 | 29.764 | 467 | 283 | 16 | 18 | 460 | 10 | 455 | 6.26e-48 | 171 |
| MsG0080048866.01.T01 | MTR_3g026950 | 28.132 | 455 | 275 | 16 | 18 | 443 | 2 | 433 | 7.26e-48 | 171 |
| MsG0080048866.01.T01 | MTR_1g040195 | 29.120 | 443 | 265 | 14 | 26 | 463 | 17 | 415 | 2.20e-47 | 169 |
| MsG0080048866.01.T01 | MTR_4g097090 | 30.090 | 442 | 261 | 14 | 47 | 460 | 34 | 455 | 6.14e-47 | 169 |
| MsG0080048866.01.T01 | MTR_7g085990 | 29.032 | 465 | 275 | 15 | 32 | 460 | 11 | 456 | 2.21e-46 | 167 |
| MsG0080048866.01.T01 | MTR_7g085930 | 28.936 | 470 | 269 | 16 | 32 | 460 | 15 | 460 | 5.23e-46 | 166 |
| MsG0080048866.01.T01 | MTR_2g015430 | 29.385 | 439 | 276 | 18 | 33 | 457 | 16 | 434 | 1.60e-45 | 164 |
| MsG0080048866.01.T01 | MTR_1g040320 | 27.891 | 441 | 262 | 13 | 26 | 463 | 17 | 404 | 9.75e-45 | 162 |
| MsG0080048866.01.T01 | MTR_7g084910 | 29.613 | 439 | 262 | 17 | 15 | 443 | 14 | 415 | 1.89e-41 | 153 |
| MsG0080048866.01.T01 | MTR_7g056087 | 26.535 | 456 | 297 | 18 | 18 | 458 | 4 | 436 | 7.32e-41 | 152 |
| MsG0080048866.01.T01 | MTR_3g465930 | 28.665 | 457 | 280 | 17 | 30 | 457 | 19 | 458 | 4.03e-39 | 147 |
| MsG0080048866.01.T01 | MTR_1g040315 | 27.356 | 435 | 254 | 14 | 26 | 457 | 17 | 392 | 2.12e-37 | 142 |
| MsG0080048866.01.T01 | MTR_3g465990 | 27.766 | 461 | 280 | 19 | 26 | 457 | 18 | 454 | 3.59e-37 | 142 |
| MsG0080048866.01.T01 | MTR_3g465980 | 27.983 | 461 | 279 | 19 | 26 | 457 | 18 | 454 | 8.40e-37 | 141 |
| MsG0080048866.01.T01 | MTR_4g013050 | 28.000 | 450 | 241 | 21 | 19 | 445 | 5 | 394 | 8.73e-37 | 140 |
| MsG0080048866.01.T01 | MTR_3g465910 | 29.148 | 446 | 278 | 19 | 34 | 453 | 18 | 451 | 4.20e-35 | 137 |
| MsG0080048866.01.T01 | MTR_7g086000 | 28.200 | 461 | 279 | 18 | 16 | 445 | 2 | 441 | 4.56e-34 | 133 |
| MsG0080048866.01.T01 | MTR_6g053810 | 28.348 | 448 | 275 | 21 | 39 | 457 | 29 | 459 | 1.06e-33 | 132 |
| MsG0080048866.01.T01 | MTR_7g114510 | 29.450 | 309 | 198 | 10 | 158 | 457 | 1 | 298 | 6.06e-32 | 124 |
| MsG0080048866.01.T01 | MTR_3g465950 | 28.009 | 457 | 278 | 20 | 26 | 457 | 18 | 448 | 2.34e-31 | 125 |
| MsG0080048866.01.T01 | MTR_3g465880 | 28.602 | 472 | 293 | 25 | 13 | 457 | 7 | 461 | 1.32e-30 | 124 |
| MsG0080048866.01.T01 | MTR_7g110610 | 27.470 | 415 | 222 | 14 | 23 | 424 | 2 | 350 | 4.18e-30 | 121 |
| MsG0080048866.01.T01 | MTR_0502s0010 | 30.738 | 244 | 157 | 6 | 117 | 357 | 1 | 235 | 3.33e-28 | 112 |
| MsG0080048866.01.T01 | MTR_5g090830 | 25.123 | 406 | 251 | 15 | 40 | 412 | 29 | 414 | 8.68e-25 | 107 |
| MsG0080048866.01.T01 | MTR_5g026320 | 24.706 | 425 | 287 | 14 | 35 | 447 | 34 | 437 | 9.16e-25 | 107 |
| MsG0080048866.01.T01 | MTR_5g090810 | 25.436 | 401 | 256 | 14 | 40 | 412 | 29 | 414 | 1.15e-24 | 106 |
| MsG0080048866.01.T01 | MTR_7g114420 | 28.014 | 282 | 166 | 10 | 185 | 463 | 3 | 250 | 1.54e-23 | 100 |
| MsG0080048866.01.T01 | MTR_3g465870 | 30.492 | 305 | 175 | 14 | 14 | 301 | 8 | 292 | 2.07e-23 | 102 |
| MsG0080048866.01.T01 | MTR_5g090880 | 25.479 | 365 | 223 | 14 | 78 | 410 | 67 | 414 | 2.55e-22 | 99.8 |
| MsG0080048866.01.T01 | MTR_3g086020 | 24.762 | 420 | 255 | 17 | 14 | 418 | 1 | 374 | 2.58e-22 | 99.4 |
| MsG0080048866.01.T01 | MTR_0042s0190 | 27.706 | 231 | 162 | 4 | 183 | 413 | 1 | 226 | 3.59e-22 | 96.7 |
| MsG0080048866.01.T01 | MTR_3g450710 | 25.849 | 383 | 241 | 15 | 58 | 412 | 46 | 413 | 5.07e-21 | 95.9 |
| MsG0080048866.01.T01 | MTR_8g079980 | 25.057 | 439 | 264 | 21 | 20 | 433 | 5 | 403 | 1.71e-20 | 94.0 |
| MsG0080048866.01.T01 | MTR_3g450690 | 25.762 | 361 | 227 | 14 | 78 | 412 | 72 | 417 | 3.28e-20 | 93.6 |
| MsG0080048866.01.T01 | MTR_8g079970 | 24.764 | 424 | 252 | 14 | 16 | 412 | 1 | 384 | 3.09e-19 | 90.1 |
| MsG0080048866.01.T01 | MTR_4g094838 | 24.528 | 371 | 229 | 14 | 58 | 410 | 45 | 382 | 8.11e-19 | 89.0 |
| MsG0080048866.01.T01 | MTR_0190s0020 | 24.806 | 387 | 248 | 18 | 78 | 446 | 63 | 424 | 1.99e-18 | 87.8 |
| MsG0080048866.01.T01 | MTR_8g467580 | 24.832 | 447 | 271 | 22 | 14 | 432 | 1 | 410 | 2.07e-18 | 87.8 |
| MsG0080048866.01.T01 | MTR_4g022825 | 23.571 | 420 | 258 | 18 | 60 | 446 | 33 | 422 | 6.24e-18 | 86.3 |
| MsG0080048866.01.T01 | MTR_4g094835 | 24.581 | 358 | 220 | 17 | 78 | 410 | 64 | 396 | 6.30e-17 | 83.2 |
| MsG0080048866.01.T01 | MTR_3g049140 | 28.505 | 214 | 128 | 8 | 248 | 443 | 20 | 226 | 8.59e-17 | 80.5 |
| MsG0080048866.01.T01 | MTR_8g041770 | 24.331 | 411 | 267 | 19 | 21 | 410 | 4 | 391 | 1.58e-16 | 82.0 |
| MsG0080048866.01.T01 | MTR_4g094842 | 23.563 | 348 | 240 | 14 | 78 | 410 | 62 | 398 | 4.35e-16 | 80.5 |
| MsG0080048866.01.T01 | MTR_8g467590 | 24.201 | 438 | 274 | 22 | 22 | 432 | 4 | 410 | 5.04e-16 | 80.5 |
| MsG0080048866.01.T01 | MTR_0042s0190 | 28.378 | 148 | 104 | 2 | 266 | 413 | 16 | 161 | 1.82e-15 | 76.3 |
| MsG0080048866.01.T01 | MTR_3g088420 | 25.193 | 389 | 245 | 21 | 78 | 447 | 55 | 416 | 2.34e-15 | 78.2 |
| MsG0080048866.01.T01 | MTR_6g045553 | 23.146 | 445 | 280 | 20 | 51 | 455 | 44 | 466 | 3.17e-15 | 78.2 |
| MsG0080048866.01.T01 | MTR_4g094832 | 24.522 | 314 | 197 | 16 | 115 | 410 | 89 | 380 | 4.83e-15 | 77.4 |
| MsG0080048866.01.T01 | MTR_7g114500 | 32.857 | 140 | 83 | 5 | 26 | 164 | 18 | 147 | 1.43e-14 | 71.6 |
| MsG0080048866.01.T01 | MTR_2g007880 | 22.248 | 427 | 272 | 17 | 16 | 416 | 15 | 407 | 3.09e-14 | 75.1 |
| MsG0080048866.01.T01 | MTR_3g101960 | 24.242 | 462 | 277 | 23 | 21 | 445 | 6 | 431 | 3.46e-14 | 74.7 |
| MsG0080048866.01.T01 | MTR_4g022720 | 23.944 | 355 | 226 | 15 | 78 | 410 | 55 | 387 | 3.68e-14 | 74.7 |
| MsG0080048866.01.T01 | MTR_4g022670 | 25.634 | 355 | 226 | 17 | 78 | 410 | 55 | 393 | 8.06e-14 | 73.6 |
| MsG0080048866.01.T01 | MTR_6g015320 | 25.168 | 298 | 194 | 13 | 160 | 437 | 143 | 431 | 1.61e-13 | 72.8 |
| MsG0080048866.01.T01 | MTR_0042s0230 | 34.965 | 143 | 82 | 6 | 26 | 167 | 17 | 149 | 2.35e-13 | 68.2 |
| MsG0080048866.01.T01 | MTR_7g014200 | 22.539 | 386 | 254 | 14 | 58 | 409 | 46 | 420 | 2.72e-13 | 72.0 |
| MsG0080048866.01.T01 | MTR_8g039950 | 39.640 | 111 | 59 | 4 | 26 | 136 | 17 | 119 | 6.81e-13 | 65.9 |
| MsG0080048866.01.T01 | MTR_1g046770 | 30.000 | 180 | 96 | 8 | 279 | 457 | 36 | 186 | 1.27e-12 | 67.0 |
| MsG0080048866.01.T01 | MTR_7g114960 | 22.016 | 377 | 252 | 11 | 18 | 381 | 8 | 355 | 1.28e-12 | 70.1 |
| MsG0080048866.01.T01 | MTR_3g026310 | 23.492 | 315 | 211 | 11 | 151 | 447 | 129 | 431 | 1.59e-12 | 69.7 |
| MsG0080048866.01.T01 | MTR_7g085960 | 28.079 | 203 | 107 | 8 | 279 | 465 | 15 | 194 | 2.93e-12 | 65.9 |
| MsG0080048866.01.T01 | MTR_1g094790 | 23.128 | 454 | 269 | 20 | 18 | 432 | 3 | 415 | 5.78e-12 | 67.8 |
| MsG0080048866.01.T01 | MTR_4g022800 | 22.905 | 358 | 233 | 15 | 78 | 410 | 55 | 394 | 5.78e-12 | 67.8 |
| MsG0080048866.01.T01 | MTR_7g014160 | 23.214 | 392 | 249 | 17 | 58 | 409 | 46 | 425 | 1.38e-11 | 66.6 |
| MsG0080048866.01.T01 | MTR_3g049080 | 33.333 | 87 | 52 | 2 | 18 | 104 | 2 | 82 | 8.96e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048866.01.T01 | AT1G03390 | 66.304 | 460 | 144 | 6 | 6 | 460 | 5 | 458 | 0.0 | 625 |
| MsG0080048866.01.T01 | AT1G27620 | 36.384 | 437 | 240 | 18 | 31 | 458 | 19 | 426 | 1.32e-73 | 239 |
| MsG0080048866.01.T01 | AT5G41040 | 34.382 | 445 | 262 | 15 | 24 | 458 | 15 | 439 | 3.45e-73 | 238 |
| MsG0080048866.01.T01 | AT5G41040 | 34.382 | 445 | 262 | 15 | 24 | 458 | 31 | 455 | 4.20e-73 | 238 |
| MsG0080048866.01.T01 | AT3G48720 | 32.407 | 432 | 269 | 14 | 31 | 459 | 19 | 430 | 2.75e-67 | 222 |
| MsG0080048866.01.T01 | AT5G63560 | 33.562 | 438 | 255 | 18 | 26 | 453 | 9 | 420 | 1.15e-65 | 218 |
| MsG0080048866.01.T01 | AT3G03480 | 33.560 | 441 | 262 | 16 | 26 | 457 | 27 | 445 | 4.39e-58 | 198 |
| MsG0080048866.01.T01 | AT5G17540 | 32.960 | 446 | 259 | 17 | 26 | 457 | 17 | 436 | 9.45e-56 | 192 |
| MsG0080048866.01.T01 | AT5G48930 | 30.580 | 448 | 280 | 15 | 21 | 457 | 3 | 430 | 3.13e-55 | 190 |
| MsG0080048866.01.T01 | AT1G28680 | 30.464 | 453 | 286 | 19 | 18 | 457 | 4 | 440 | 2.47e-52 | 183 |
| MsG0080048866.01.T01 | AT2G40230 | 30.820 | 451 | 267 | 18 | 19 | 453 | 3 | 424 | 1.55e-51 | 180 |
| MsG0080048866.01.T01 | AT1G65450 | 28.390 | 472 | 292 | 18 | 1 | 455 | 1 | 443 | 5.33e-45 | 163 |
| MsG0080048866.01.T01 | AT2G19070 | 29.263 | 475 | 278 | 20 | 17 | 460 | 3 | 450 | 2.21e-44 | 161 |
| MsG0080048866.01.T01 | AT1G28680 | 30.831 | 373 | 238 | 15 | 26 | 392 | 12 | 370 | 5.91e-44 | 159 |
| MsG0080048866.01.T01 | AT5G57840 | 28.200 | 461 | 274 | 15 | 21 | 455 | 3 | 432 | 1.12e-39 | 149 |
| MsG0080048866.01.T01 | AT3G62160 | 30.077 | 389 | 233 | 15 | 36 | 415 | 20 | 378 | 6.98e-39 | 146 |
| MsG0080048866.01.T01 | AT5G07080 | 26.609 | 466 | 281 | 13 | 20 | 457 | 13 | 445 | 1.11e-38 | 146 |
| MsG0080048866.01.T01 | AT4G31910 | 28.281 | 442 | 275 | 19 | 42 | 458 | 32 | 456 | 3.58e-35 | 136 |
| MsG0080048866.01.T01 | AT2G23510 | 29.605 | 456 | 274 | 21 | 23 | 457 | 18 | 447 | 9.45e-35 | 135 |
| MsG0080048866.01.T01 | AT2G25150 | 27.556 | 450 | 288 | 19 | 30 | 457 | 16 | 449 | 1.39e-31 | 126 |
| MsG0080048866.01.T01 | AT1G24430 | 23.624 | 436 | 279 | 18 | 14 | 433 | 1 | 398 | 3.35e-25 | 107 |
| MsG0080048866.01.T01 | AT3G47170 | 25.155 | 485 | 278 | 22 | 26 | 463 | 20 | 466 | 6.88e-25 | 107 |
| MsG0080048866.01.T01 | AT3G26040 | 26.214 | 412 | 257 | 16 | 18 | 413 | 3 | 383 | 1.20e-24 | 106 |
| MsG0080048866.01.T01 | AT1G65450 | 26.621 | 293 | 189 | 11 | 175 | 455 | 1 | 279 | 1.89e-22 | 97.4 |
| MsG0080048866.01.T01 | AT5G67160 | 28.612 | 353 | 233 | 13 | 70 | 414 | 48 | 389 | 6.12e-22 | 98.2 |
| MsG0080048866.01.T01 | AT1G31490 | 23.134 | 402 | 275 | 16 | 18 | 409 | 6 | 383 | 1.94e-20 | 94.0 |
| MsG0080048866.01.T01 | AT1G78990 | 24.309 | 362 | 234 | 13 | 70 | 412 | 58 | 398 | 7.13e-19 | 89.4 |
| MsG0080048866.01.T01 | AT5G23940 | 23.641 | 423 | 271 | 18 | 16 | 409 | 1 | 400 | 2.32e-18 | 87.8 |
| MsG0080048866.01.T01 | AT1G32910 | 24.533 | 375 | 226 | 15 | 70 | 412 | 52 | 401 | 5.03e-18 | 86.7 |
| MsG0080048866.01.T01 | AT3G50280 | 25.281 | 356 | 232 | 13 | 78 | 414 | 59 | 399 | 7.54e-18 | 86.3 |
| MsG0080048866.01.T01 | AT3G29590 | 24.816 | 407 | 244 | 16 | 86 | 459 | 69 | 446 | 1.61e-17 | 85.1 |
| MsG0080048866.01.T01 | AT5G38130 | 25.474 | 369 | 238 | 18 | 70 | 416 | 66 | 419 | 5.94e-17 | 83.6 |
| MsG0080048866.01.T01 | AT5G16410 | 24.173 | 393 | 249 | 17 | 70 | 438 | 79 | 446 | 2.79e-16 | 81.6 |
| MsG0080048866.01.T01 | AT3G50300 | 24.866 | 374 | 238 | 15 | 67 | 414 | 43 | 399 | 1.12e-15 | 79.3 |
| MsG0080048866.01.T01 | AT3G30280 | 24.324 | 407 | 249 | 19 | 30 | 411 | 15 | 387 | 1.46e-15 | 79.0 |
| MsG0080048866.01.T01 | AT5G47980 | 23.898 | 431 | 253 | 15 | 14 | 413 | 1 | 387 | 1.58e-15 | 79.0 |
| MsG0080048866.01.T01 | AT5G23970 | 24.396 | 455 | 272 | 20 | 34 | 464 | 11 | 417 | 3.71e-15 | 77.8 |
| MsG0080048866.01.T01 | AT5G07870 | 24.638 | 483 | 297 | 23 | 18 | 465 | 8 | 458 | 1.32e-14 | 76.3 |
| MsG0080048866.01.T01 | AT3G29670 | 23.628 | 419 | 265 | 21 | 58 | 448 | 45 | 436 | 2.75e-14 | 75.1 |
| MsG0080048866.01.T01 | AT4G15390 | 21.957 | 460 | 314 | 17 | 11 | 455 | 1 | 430 | 2.55e-13 | 72.0 |
| MsG0080048866.01.T01 | AT4G15390 | 21.957 | 460 | 314 | 17 | 11 | 455 | 1 | 430 | 2.55e-13 | 72.0 |
| MsG0080048866.01.T01 | AT3G50280 | 26.182 | 275 | 172 | 11 | 156 | 414 | 10 | 269 | 6.89e-13 | 69.7 |
| MsG0080048866.01.T01 | AT1G24420 | 23.114 | 411 | 266 | 20 | 18 | 412 | 5 | 381 | 1.36e-12 | 69.7 |
| MsG0080048866.01.T01 | AT1G24420 | 23.114 | 411 | 266 | 20 | 18 | 412 | 5 | 381 | 1.36e-12 | 69.7 |
| MsG0080048866.01.T01 | AT5G47950 | 29.557 | 203 | 123 | 10 | 30 | 229 | 15 | 200 | 3.33e-12 | 68.6 |
| MsG0080048866.01.T01 | AT5G61160 | 22.812 | 377 | 263 | 15 | 55 | 412 | 38 | 405 | 1.77e-11 | 66.6 |
| MsG0080048866.01.T01 | AT5G39090 | 22.296 | 453 | 300 | 16 | 14 | 440 | 1 | 427 | 5.55e-11 | 64.7 |
Find 92 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTATAATTGTTCTGATTT+TGG | 0.098860 | contig498end:+26602 | MsG0080048866.01.T01:CDS |
| AGCCGCAAGATTACGAATTA+AGG | 0.212133 | contig498end:+26306 | MsG0080048866.01.T01:CDS |
| ATGCAATGGCTGCACATATT+TGG | 0.230199 | contig498end:+26255 | MsG0080048866.01.T01:CDS |
| CCTTCCAGAGAGAGGGTAAT+AGG | 0.259302 | contig498end:-25673 | MsG0080048866.01.T01:intergenic |
| AACTTGTTCGCAGCAGATTC+AGG | 0.294220 | contig498end:-26746 | MsG0080048866.01.T01:intergenic |
| CCGCGCTCTAGCTGATGTTT+TGG | 0.307482 | contig498end:+25647 | MsG0080048866.01.T01:CDS |
| TCAATAGGACCAGCATAAAT+TGG | 0.316153 | contig498end:-26635 | MsG0080048866.01.T01:intergenic |
| AGAAGAACAAGGAGCGTTAA+TGG | 0.317914 | contig498end:+25743 | MsG0080048866.01.T01:CDS |
| ATTACCAGAGACTACTCTTT+TGG | 0.326454 | contig498end:+26451 | MsG0080048866.01.T01:CDS |
| ACTTTGTATTGTTCTTCATT+TGG | 0.336455 | contig498end:-25852 | MsG0080048866.01.T01:intergenic |
| TTGACAGGAATAGGCTTTGA+TGG | 0.354952 | contig498end:-25492 | MsG0080048866.01.T01:intergenic |
| TCTCTGTTCCAACAAGGTTC+AGG | 0.357662 | contig498end:-26035 | MsG0080048866.01.T01:intergenic |
| AATGGTTCCCAAGATGGATT+TGG | 0.362060 | contig498end:-25816 | MsG0080048866.01.T01:intergenic |
| CCATAAAACCCTTCTTTCAA+TGG | 0.366018 | contig498end:-26371 | MsG0080048866.01.T01:intergenic |
| ATGGGAGCTATGCAGTTTCT+AGG | 0.367373 | contig498end:+25969 | MsG0080048866.01.T01:CDS |
| TGCTGCTCCAAATCCATCTT+GGG | 0.372169 | contig498end:+25809 | MsG0080048866.01.T01:CDS |
| CCACCAAACTCAAGTTGCTT+TGG | 0.374913 | contig498end:-26545 | MsG0080048866.01.T01:intergenic |
| CTAGAATCACCTTCTCCTTC+AGG | 0.380164 | contig498end:-26692 | MsG0080048866.01.T01:intergenic |
| AGGCCAAAGCAACTTGAGTT+TGG | 0.383129 | contig498end:+26542 | MsG0080048866.01.T01:CDS |
| TCAAACCTCGATGATGTGAT+TGG | 0.383794 | contig498end:+25537 | MsG0080048866.01.T01:CDS |
| ATATGTGGAAATTTCACTTC+TGG | 0.395042 | contig498end:-26080 | MsG0080048866.01.T01:intergenic |
| TTGCTGCTCCAAATCCATCT+TGG | 0.397296 | contig498end:+25808 | MsG0080048866.01.T01:CDS |
| CAAACTTAACAATGAAACTT+TGG | 0.400300 | contig498end:+26129 | MsG0080048866.01.T01:CDS |
| TTTGGAAATTTGAATATCAA+TGG | 0.400500 | contig498end:-25834 | MsG0080048866.01.T01:intergenic |
| CTTCCAGAGAGAGGGTAATA+GGG | 0.404106 | contig498end:-25672 | MsG0080048866.01.T01:intergenic |
| ATGCGATAACACTTCTGAAC+AGG | 0.407661 | contig498end:-26161 | MsG0080048866.01.T01:intergenic |
| AATATCAATGGTTCCCAAGA+TGG | 0.408999 | contig498end:-25822 | MsG0080048866.01.T01:intergenic |
| AGAAGTGAAATTTCCACATA+TGG | 0.416239 | contig498end:+26082 | MsG0080048866.01.T01:CDS |
| TCACCTGGTTTGACAGGAAT+AGG | 0.417319 | contig498end:-25501 | MsG0080048866.01.T01:intergenic |
| GGTGTAGGTGTTAAATCAAT+AGG | 0.417668 | contig498end:-26650 | MsG0080048866.01.T01:intergenic |
| CGGCCAAGTATTTCTGCAAC+CGG | 0.424613 | contig498end:-25627 | MsG0080048866.01.T01:intergenic |
| CTGCACATATTTGGAGATCA+TGG | 0.426583 | contig498end:+26264 | MsG0080048866.01.T01:CDS |
| GCTCAACCATTTGATTCTGC+TGG | 0.426988 | contig498end:+26218 | MsG0080048866.01.T01:CDS |
| GTTCCCTATTACCCTCTCTC+TGG | 0.430323 | contig498end:+25669 | MsG0080048866.01.T01:CDS |
| TATTGCTTGCACAACAAGTA+AGG | 0.435787 | contig498end:+26406 | MsG0080048866.01.T01:CDS |
| TTACAGAACCTGAACCTTGT+TGG | 0.439465 | contig498end:+26027 | MsG0080048866.01.T01:CDS |
| AAGGTTTCTGATCTTGTGAA+TGG | 0.443284 | contig498end:+26425 | MsG0080048866.01.T01:CDS |
| TTGATTATGTTGAAGTTGAT+AGG | 0.454882 | contig498end:+26522 | MsG0080048866.01.T01:CDS |
| AAAGAGTCACCTGGTTTGAC+AGG | 0.465860 | contig498end:-25507 | MsG0080048866.01.T01:intergenic |
| AACGGAGAATGTGTTGATAA+TGG | 0.468370 | contig498end:-25466 | MsG0080048866.01.T01:intergenic |
| AAAATCCACCATTGAAAGAA+GGG | 0.480777 | contig498end:+26363 | MsG0080048866.01.T01:CDS |
| AAACCGGTTGCAGAAATACT+TGG | 0.486758 | contig498end:+25624 | MsG0080048866.01.T01:CDS |
| AATGCCACTTGTTATAGCTC+AGG | 0.506750 | contig498end:+25881 | MsG0080048866.01.T01:CDS |
| AACCTTAATTCGTAATCTTG+CGG | 0.509012 | contig498end:-26308 | MsG0080048866.01.T01:intergenic |
| GAACAAGTTTACACAAGCCT+TGG | 0.510546 | contig498end:+26760 | MsG0080048866.01.T01:CDS |
| CCAAAGCAACTTGAGTTTGG+TGG | 0.511667 | contig498end:+26545 | MsG0080048866.01.T01:CDS |
| TGTGGAAATTTCACTTCTGG+TGG | 0.512819 | contig498end:-26077 | MsG0080048866.01.T01:intergenic |
| GTGCAACCAGCAGAATCAAA+TGG | 0.517769 | contig498end:-26224 | MsG0080048866.01.T01:intergenic |
| TTCACTTCTGGTGGATCACG+TGG | 0.525704 | contig498end:-26068 | MsG0080048866.01.T01:intergenic |
| CCTATTACCCTCTCTCTGGA+AGG | 0.526401 | contig498end:+25673 | MsG0080048866.01.T01:CDS |
| TGAAGAACAATACAAAGTGT+TGG | 0.527463 | contig498end:+25857 | MsG0080048866.01.T01:CDS |
| TCATTGTATCTGTGATGGAA+TGG | 0.531490 | contig498end:+25950 | MsG0080048866.01.T01:CDS |
| TTGCACTACATTTGATGCAA+TGG | 0.535105 | contig498end:+26241 | MsG0080048866.01.T01:CDS |
| TAAAACCCTTCTTTCAATGG+TGG | 0.535458 | contig498end:-26368 | MsG0080048866.01.T01:intergenic |
| AGAGGGAGTTCTTGAACCCA+TGG | 0.536362 | contig498end:-25420 | MsG0080048866.01.T01:intergenic |
| ACATGTGGTGGATTTAGCCT+CGG | 0.543992 | contig498end:+25915 | MsG0080048866.01.T01:CDS |
| CGAACCAAAAGAGTAGTCTC+TGG | 0.545439 | contig498end:-26455 | MsG0080048866.01.T01:intergenic |
| ATTCTCATGAACTCCATATG+TGG | 0.547153 | contig498end:-26095 | MsG0080048866.01.T01:intergenic |
| TGCACATATTTGGAGATCAT+GGG | 0.553120 | contig498end:+26265 | MsG0080048866.01.T01:CDS |
| CTATGCAGTTTCTAGGAGCA+TGG | 0.553170 | contig498end:+25976 | MsG0080048866.01.T01:CDS |
| GTAAACTTACAATTACTCAA+TGG | 0.554348 | contig498end:+26567 | MsG0080048866.01.T01:CDS |
| CATTGTATCTGTGATGGAAT+GGG | 0.558261 | contig498end:+25951 | MsG0080048866.01.T01:CDS |
| AATACACAAACTTGAGGTGT+AGG | 0.562354 | contig498end:-26665 | MsG0080048866.01.T01:intergenic |
| TGGGGTAAGCCAATTTATGC+TGG | 0.566093 | contig498end:+26626 | MsG0080048866.01.T01:CDS |
| GGAATATTCAAAGGATTGAG+AGG | 0.566846 | contig498end:-25438 | MsG0080048866.01.T01:intergenic |
| AAGCCTATTCCTGTCAAACC+AGG | 0.569590 | contig498end:+25498 | MsG0080048866.01.T01:CDS |
| AGTTGATCTCAAATATTCCT+CGG | 0.570133 | contig498end:-26498 | MsG0080048866.01.T01:intergenic |
| TATGCAGTTTCTAGGAGCAT+GGG | 0.573221 | contig498end:+25977 | MsG0080048866.01.T01:CDS |
| AATGTGTTGATAATGGTGAC+TGG | 0.575398 | contig498end:-25459 | MsG0080048866.01.T01:intergenic |
| CTCTTAACCTTCCAGAGAGA+GGG | 0.576626 | contig498end:-25680 | MsG0080048866.01.T01:intergenic |
| ATGGTGACTGGAATATTCAA+AGG | 0.586441 | contig498end:-25447 | MsG0080048866.01.T01:intergenic |
| CTTTGTCATTGTATCTGTGA+TGG | 0.588884 | contig498end:+25945 | MsG0080048866.01.T01:CDS |
| GATTGATAAAAGTAAACTGT+CGG | 0.588937 | contig498end:-25576 | MsG0080048866.01.T01:intergenic |
| GTTGAGCAAGTGATTTCAAG+TGG | 0.594391 | contig498end:-26202 | MsG0080048866.01.T01:intergenic |
| TCTCTTAACCTTCCAGAGAG+AGG | 0.594993 | contig498end:-25681 | MsG0080048866.01.T01:intergenic |
| AAAATCTCTCTGTTCCAACA+AGG | 0.600364 | contig498end:-26041 | MsG0080048866.01.T01:intergenic |
| GAGTTCATGAGAATTGATGA+AGG | 0.601902 | contig498end:+26104 | MsG0080048866.01.T01:CDS |
| GAAAGATATAAAGAGTCACC+TGG | 0.606953 | contig498end:-25516 | MsG0080048866.01.T01:intergenic |
| TTCGGAGAAGAAGAAGAACA+AGG | 0.616846 | contig498end:+25732 | MsG0080048866.01.T01:CDS |
| AATAGGCTTTGATGGAGTAA+CGG | 0.618575 | contig498end:-25484 | MsG0080048866.01.T01:intergenic |
| GTTACCTGAGCTATAACAAG+TGG | 0.625798 | contig498end:-25885 | MsG0080048866.01.T01:intergenic |
| GGAGAAGGTGATTCTAGTGG+TGG | 0.632681 | contig498end:+26698 | MsG0080048866.01.T01:CDS |
| AACATAGCTTTATCTGAACT+AGG | 0.638913 | contig498end:+25780 | MsG0080048866.01.T01:CDS |
| CAACATTGAATCAATAACCA+AGG | 0.646066 | contig498end:-26777 | MsG0080048866.01.T01:intergenic |
| GAATATTCAAAGGATTGAGA+GGG | 0.647428 | contig498end:-25437 | MsG0080048866.01.T01:intergenic |
| GAAGGAGAAGGTGATTCTAG+TGG | 0.654729 | contig498end:+26695 | MsG0080048866.01.T01:CDS |
| CATCACAGATACAATGACAA+AGG | 0.659886 | contig498end:-25944 | MsG0080048866.01.T01:intergenic |
| AGCTCGACAAAGTGTAACCG+AGG | 0.683483 | contig498end:+26481 | MsG0080048866.01.T01:CDS |
| CCAAAACATCAGCTAGAGCG+CGG | 0.685011 | contig498end:-25647 | MsG0080048865.01.T01:intergenic |
| AATGACAAAGGCGTAAACCG+AGG | 0.712450 | contig498end:-25932 | MsG0080048865.01.T01:intergenic |
| GGGAGTTCTTGAACCCATGG+AGG | 0.731086 | contig498end:-25417 | MsG0080048865.01.T01:intergenic |
| GCGCTCCAATCACATCATCG+AGG | 0.780384 | contig498end:-25542 | MsG0080048865.01.T01:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATAATTGTTCTGATTT+TGG | + | contig498end:26602-26621 | MsG0080048866.01.T01:CDS | 15.0% |
| !! | TTTGGAAATTTGAATATCAA+TGG | - | contig498end:25837-25856 | MsG0080048866.01.T01:intergenic | 20.0% |
| ! | ACTTTGTATTGTTCTTCATT+TGG | - | contig498end:25855-25874 | MsG0080048866.01.T01:intergenic | 25.0% |
| ! | CAAACTTAACAATGAAACTT+TGG | + | contig498end:26129-26148 | MsG0080048866.01.T01:CDS | 25.0% |
| ! | GATTGATAAAAGTAAACTGT+CGG | - | contig498end:25579-25598 | MsG0080048866.01.T01:intergenic | 25.0% |
| ! | GTAAACTTACAATTACTCAA+TGG | + | contig498end:26567-26586 | MsG0080048866.01.T01:CDS | 25.0% |
| !! | ATAATTGTTCTGATTTTGGA+TGG | + | contig498end:26606-26625 | MsG0080048866.01.T01:CDS | 25.0% |
| !! | TAATTGTTCTGATTTTGGAT+GGG | + | contig498end:26607-26626 | MsG0080048866.01.T01:CDS | 25.0% |
| !! | TTGATTATGTTGAAGTTGAT+AGG | + | contig498end:26522-26541 | MsG0080048866.01.T01:CDS | 25.0% |
| AAAAATCCACCATTGAAAGA+AGG | + | contig498end:26362-26381 | MsG0080048866.01.T01:CDS | 30.0% | |
| AAAATCCACCATTGAAAGAA+GGG | + | contig498end:26363-26382 | MsG0080048866.01.T01:CDS | 30.0% | |
| AACAGCAAAAACAGGAAAAT+TGG | + | contig498end:26004-26023 | MsG0080048866.01.T01:CDS | 30.0% | |
| AACCTTAATTCGTAATCTTG+CGG | - | contig498end:26311-26330 | MsG0080048866.01.T01:intergenic | 30.0% | |
| AAGTACTTCTTTCCAAAAAC+CGG | + | contig498end:25608-25627 | MsG0080048866.01.T01:CDS | 30.0% | |
| AGAAGTGAAATTTCCACATA+TGG | + | contig498end:26082-26101 | MsG0080048866.01.T01:CDS | 30.0% | |
| AGTTGATCTCAAATATTCCT+CGG | - | contig498end:26501-26520 | MsG0080048866.01.T01:intergenic | 30.0% | |
| ATATGTGGAAATTTCACTTC+TGG | - | contig498end:26083-26102 | MsG0080048866.01.T01:intergenic | 30.0% | |
| CAACATTGAATCAATAACCA+AGG | - | contig498end:26780-26799 | MsG0080048866.01.T01:intergenic | 30.0% | |
| GAATATTCAAAGGATTGAGA+GGG | - | contig498end:25440-25459 | MsG0080048866.01.T01:intergenic | 30.0% | |
| GGTAAAAATACACAAACTTG+AGG | - | contig498end:26674-26693 | MsG0080048866.01.T01:intergenic | 30.0% | |
| TGAAGAACAATACAAAGTGT+TGG | + | contig498end:25857-25876 | MsG0080048866.01.T01:CDS | 30.0% | |
| ! | AATTGTTCTGATTTTGGATG+GGG | + | contig498end:26608-26627 | MsG0080048866.01.T01:CDS | 30.0% |
| !! | AACATAGCTTTATCTGAACT+AGG | + | contig498end:25780-25799 | MsG0080048866.01.T01:CDS | 30.0% |
| !! | GTTTGTGTATTTTTACCTGA+AGG | + | contig498end:26677-26696 | MsG0080048866.01.T01:CDS | 30.0% |
| !!! | GGTAAACTGGAAGTATTTTT+CGG | + | contig498end:25714-25733 | MsG0080048866.01.T01:CDS | 30.0% |
| AAAATCTCTCTGTTCCAACA+AGG | - | contig498end:26044-26063 | MsG0080048866.01.T01:intergenic | 35.0% | |
| AAGGTTTCTGATCTTGTGAA+TGG | + | contig498end:26425-26444 | MsG0080048866.01.T01:CDS | 35.0% | |
| AATACACAAACTTGAGGTGT+AGG | - | contig498end:26668-26687 | MsG0080048866.01.T01:intergenic | 35.0% | |
| AATATCAATGGTTCCCAAGA+TGG | - | contig498end:25825-25844 | MsG0080048866.01.T01:intergenic | 35.0% | |
| AGGTTAAGAGAGACGAAAAA+CGG | + | contig498end:25693-25712 | MsG0080048866.01.T01:CDS | 35.0% | |
| ATGGTGACTGGAATATTCAA+AGG | - | contig498end:25450-25469 | MsG0080048866.01.T01:intergenic | 35.0% | |
| ATTCTCATGAACTCCATATG+TGG | - | contig498end:26098-26117 | MsG0080048866.01.T01:intergenic | 35.0% | |
| CATCACAGATACAATGACAA+AGG | - | contig498end:25947-25966 | MsG0080048866.01.T01:intergenic | 35.0% | |
| CCATAAAACCCTTCTTTCAA+TGG | - | contig498end:26374-26393 | MsG0080048866.01.T01:intergenic | 35.0% | |
| CTTTGTCATTGTATCTGTGA+TGG | + | contig498end:25945-25964 | MsG0080048866.01.T01:CDS | 35.0% | |
| GAAAGATATAAAGAGTCACC+TGG | - | contig498end:25519-25538 | MsG0080048866.01.T01:intergenic | 35.0% | |
| GAGTTCATGAGAATTGATGA+AGG | + | contig498end:26104-26123 | MsG0080048866.01.T01:CDS | 35.0% | |
| GGAATATTCAAAGGATTGAG+AGG | - | contig498end:25441-25460 | MsG0080048866.01.T01:intergenic | 35.0% | |
| GGTGTAGGTGTTAAATCAAT+AGG | - | contig498end:26653-26672 | MsG0080048866.01.T01:intergenic | 35.0% | |
| TAAAACCCTTCTTTCAATGG+TGG | - | contig498end:26371-26390 | MsG0080048866.01.T01:intergenic | 35.0% | |
| TATTGCTTGCACAACAAGTA+AGG | + | contig498end:26406-26425 | MsG0080048866.01.T01:CDS | 35.0% | |
| TCAATAGGACCAGCATAAAT+TGG | - | contig498end:26638-26657 | MsG0080048866.01.T01:intergenic | 35.0% | |
| TGCACATATTTGGAGATCAT+GGG | + | contig498end:26265-26284 | MsG0080048866.01.T01:CDS | 35.0% | |
| TTGCACTACATTTGATGCAA+TGG | + | contig498end:26241-26260 | MsG0080048866.01.T01:CDS | 35.0% | |
| ! | AACGGAGAATGTGTTGATAA+TGG | - | contig498end:25469-25488 | MsG0080048866.01.T01:intergenic | 35.0% |
| ! | AATAGGCTTTGATGGAGTAA+CGG | - | contig498end:25487-25506 | MsG0080048866.01.T01:intergenic | 35.0% |
| ! | ATTACCAGAGACTACTCTTT+TGG | + | contig498end:26451-26470 | MsG0080048866.01.T01:CDS | 35.0% |
| ! | CAGGTAACAATTTTCACATG+TGG | + | contig498end:25900-25919 | MsG0080048866.01.T01:CDS | 35.0% |
| ! | CATTGTATCTGTGATGGAAT+GGG | + | contig498end:25951-25970 | MsG0080048866.01.T01:CDS | 35.0% |
| ! | CCATTGAAAGAAGGGTTTTA+TGG | + | contig498end:26371-26390 | MsG0080048866.01.T01:CDS | 35.0% |
| ! | GTAACAATTTTCACATGTGG+TGG | + | contig498end:25903-25922 | MsG0080048866.01.T01:CDS | 35.0% |
| ! | TCATTGTATCTGTGATGGAA+TGG | + | contig498end:25950-25969 | MsG0080048866.01.T01:CDS | 35.0% |
| !! | AATGTGTTGATAATGGTGAC+TGG | - | contig498end:25462-25481 | MsG0080048866.01.T01:intergenic | 35.0% |
| !! | AGAAGGGTTTTATGGTAATG+TGG | + | contig498end:26379-26398 | MsG0080048866.01.T01:CDS | 35.0% |
| !! | GTATTTTTACCTGAAGGAGA+AGG | + | contig498end:26683-26702 | MsG0080048866.01.T01:CDS | 35.0% |
| AAACCGGTTGCAGAAATACT+TGG | + | contig498end:25624-25643 | MsG0080048866.01.T01:CDS | 40.0% | |
| AGAGACGAAAAACGGTAAAC+TGG | + | contig498end:25701-25720 | MsG0080048866.01.T01:CDS | 40.0% | |
| AGCCGCAAGATTACGAATTA+AGG | + | contig498end:26306-26325 | MsG0080048866.01.T01:CDS | 40.0% | |
| ATGCAATGGCTGCACATATT+TGG | + | contig498end:26255-26274 | MsG0080048866.01.T01:CDS | 40.0% | |
| ATGCGATAACACTTCTGAAC+AGG | - | contig498end:26164-26183 | MsG0080048866.01.T01:intergenic | 40.0% | |
| CTGCACATATTTGGAGATCA+TGG | + | contig498end:26264-26283 | MsG0080048866.01.T01:CDS | 40.0% | |
| GAACAAGTTTACACAAGCCT+TGG | + | contig498end:26760-26779 | MsG0080048866.01.T01:CDS | 40.0% | |
| GTTACCTGAGCTATAACAAG+TGG | - | contig498end:25888-25907 | MsG0080048866.01.T01:intergenic | 40.0% | |
| GTTGAGCAAGTGATTTCAAG+TGG | - | contig498end:26205-26224 | MsG0080048866.01.T01:intergenic | 40.0% | |
| TCAAACCTCGATGATGTGAT+TGG | + | contig498end:25537-25556 | MsG0080048866.01.T01:CDS | 40.0% | |
| TGTGGAAATTTCACTTCTGG+TGG | - | contig498end:26080-26099 | MsG0080048866.01.T01:intergenic | 40.0% | |
| TTACAGAACCTGAACCTTGT+TGG | + | contig498end:26027-26046 | MsG0080048866.01.T01:CDS | 40.0% | |
| TTCGGAGAAGAAGAAGAACA+AGG | + | contig498end:25732-25751 | MsG0080048866.01.T01:CDS | 40.0% | |
| ! | AATGGTTCCCAAGATGGATT+TGG | - | contig498end:25819-25838 | MsG0080048866.01.T01:intergenic | 40.0% |
| ! | TATGCAGTTTCTAGGAGCAT+GGG | + | contig498end:25977-25996 | MsG0080048866.01.T01:CDS | 40.0% |
| ! | TTGACAGGAATAGGCTTTGA+TGG | - | contig498end:25495-25514 | MsG0080048866.01.T01:intergenic | 40.0% |
| !! | AATGCCACTTGTTATAGCTC+AGG | + | contig498end:25881-25900 | MsG0080048866.01.T01:CDS | 40.0% |
| !! | AGAAGAACAAGGAGCGTTAA+TGG | + | contig498end:25743-25762 | MsG0080048866.01.T01:CDS | 40.0% |
| !! | GTATTTCTGCAACCGGTTTT+TGG | - | contig498end:25623-25642 | MsG0080048866.01.T01:intergenic | 40.0% |
| AAGCCTATTCCTGTCAAACC+AGG | + | contig498end:25498-25517 | MsG0080048866.01.T01:CDS | 45.0% | |
| AGGCCAAAGCAACTTGAGTT+TGG | + | contig498end:26542-26561 | MsG0080048866.01.T01:CDS | 45.0% | |
| ATGGGAGCTATGCAGTTTCT+AGG | + | contig498end:25969-25988 | MsG0080048866.01.T01:CDS | 45.0% | |
| CCAAAGCAACTTGAGTTTGG+TGG | + | contig498end:26545-26564 | MsG0080048866.01.T01:CDS | 45.0% | |
| CGAACCAAAAGAGTAGTCTC+TGG | - | contig498end:26458-26477 | MsG0080048866.01.T01:intergenic | 45.0% | |
| CTAGAATCACCTTCTCCTTC+AGG | - | contig498end:26695-26714 | MsG0080048866.01.T01:intergenic | 45.0% | |
| CTCTTAACCTTCCAGAGAGA+GGG | - | contig498end:25683-25702 | MsG0080048866.01.T01:intergenic | 45.0% | |
| CTTCCAGAGAGAGGGTAATA+GGG | - | contig498end:25675-25694 | MsG0080048866.01.T01:intergenic | 45.0% | |
| GAAGGAGAAGGTGATTCTAG+TGG | + | contig498end:26695-26714 | MsG0080048866.01.T01:CDS | 45.0% | |
| GCTCAACCATTTGATTCTGC+TGG | + | contig498end:26218-26237 | MsG0080048866.01.T01:CDS | 45.0% | |
| GTGCAACCAGCAGAATCAAA+TGG | - | contig498end:26227-26246 | MsG0080048866.01.T01:intergenic | 45.0% | |
| TCTCTGTTCCAACAAGGTTC+AGG | - | contig498end:26038-26057 | MsG0080048866.01.T01:intergenic | 45.0% | |
| TCTCTTAACCTTCCAGAGAG+AGG | - | contig498end:25684-25703 | MsG0080048866.01.T01:intergenic | 45.0% | |
| TGCTGCTCCAAATCCATCTT+GGG | + | contig498end:25809-25828 | MsG0080048866.01.T01:CDS | 45.0% | |
| TGGGGTAAGCCAATTTATGC+TGG | + | contig498end:26626-26645 | MsG0080048866.01.T01:CDS | 45.0% | |
| TTGCTGCTCCAAATCCATCT+TGG | + | contig498end:25808-25827 | MsG0080048866.01.T01:CDS | 45.0% | |
| ! | AAAGAGTCACCTGGTTTGAC+AGG | - | contig498end:25510-25529 | MsG0080048866.01.T01:intergenic | 45.0% |
| ! | AACTTGTTCGCAGCAGATTC+AGG | - | contig498end:26749-26768 | MsG0080048866.01.T01:intergenic | 45.0% |
| ! | AATGACAAAGGCGTAAACCG+AGG | - | contig498end:25935-25954 | MsG0080048866.01.T01:intergenic | 45.0% |
| ! | CCACCAAACTCAAGTTGCTT+TGG | - | contig498end:26548-26567 | MsG0080048866.01.T01:intergenic | 45.0% |
| ! | CTATGCAGTTTCTAGGAGCA+TGG | + | contig498end:25976-25995 | MsG0080048866.01.T01:CDS | 45.0% |
| ! | TCACCTGGTTTGACAGGAAT+AGG | - | contig498end:25504-25523 | MsG0080048866.01.T01:intergenic | 45.0% |
| !! | ACATGTGGTGGATTTAGCCT+CGG | + | contig498end:25915-25934 | MsG0080048866.01.T01:CDS | 45.0% |
| AGAGGGAGTTCTTGAACCCA+TGG | - | contig498end:25423-25442 | MsG0080048866.01.T01:intergenic | 50.0% | |
| AGCTCGACAAAGTGTAACCG+AGG | + | contig498end:26481-26500 | MsG0080048866.01.T01:CDS | 50.0% | |
| CCAAAACATCAGCTAGAGCG+CGG | - | contig498end:25650-25669 | MsG0080048866.01.T01:intergenic | 50.0% | |
| CCTATTACCCTCTCTCTGGA+AGG | + | contig498end:25673-25692 | MsG0080048866.01.T01:CDS | 50.0% | |
| CCTTCCAGAGAGAGGGTAAT+AGG | - | contig498end:25676-25695 | MsG0080048866.01.T01:intergenic | 50.0% | |
| GGAGAAGGTGATTCTAGTGG+TGG | + | contig498end:26698-26717 | MsG0080048866.01.T01:CDS | 50.0% | |
| GTTCCCTATTACCCTCTCTC+TGG | + | contig498end:25669-25688 | MsG0080048866.01.T01:CDS | 50.0% | |
| TGGGCTGCAACAGCAAAAAC+AGG | + | contig498end:25996-26015 | MsG0080048866.01.T01:CDS | 50.0% | |
| ! | CGGCCAAGTATTTCTGCAAC+CGG | - | contig498end:25630-25649 | MsG0080048866.01.T01:intergenic | 50.0% |
| ! | TTCACTTCTGGTGGATCACG+TGG | - | contig498end:26071-26090 | MsG0080048866.01.T01:intergenic | 50.0% |
| GCGCTCCAATCACATCATCG+AGG | - | contig498end:25545-25564 | MsG0080048866.01.T01:intergenic | 55.0% | |
| GGGAGTTCTTGAACCCATGG+AGG | - | contig498end:25420-25439 | MsG0080048866.01.T01:intergenic | 55.0% | |
| ! | CCGCGCTCTAGCTGATGTTT+TGG | + | contig498end:25647-25666 | MsG0080048866.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig498end | gene | 25411 | 26808 | 25411 | ID=MsG0080048866.01;Name=MsG0080048866.01 |
| contig498end | mRNA | 25411 | 26808 | 25411 | ID=MsG0080048866.01.T01;Parent=MsG0080048866.01;Name=MsG0080048866.01.T01;_AED=0.13;_eAED=0.13;_QI=0|-1|0|1|-1|1|1|0|465 |
| contig498end | exon | 25411 | 26808 | 25411 | ID=MsG0080048866.01.T01:exon:21872;Parent=MsG0080048866.01.T01 |
| contig498end | CDS | 25411 | 26808 | 25411 | ID=MsG0080048866.01.T01:cds;Parent=MsG0080048866.01.T01 |
| Gene Sequence |
| Protein sequence |
