Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002770.01.T02 | AAL84187.1 | 88.506 | 174 | 18 | 1 | 5 | 176 | 1 | 174 | 1.33E-103 | 305 |
| MsG0180002770.01.T03 | AAL84187.1 | 88.506 | 174 | 18 | 1 | 1 | 172 | 1 | 174 | 1.35E-103 | 305 |
| MsG0180002770.01.T04 | AAL84187.1 | 86.154 | 130 | 16 | 1 | 1 | 128 | 45 | 174 | 6.46E-71 | 220 |
| MsG0180002770.01.T01 | AAL84187.1 | 88.506 | 174 | 18 | 1 | 46 | 217 | 1 | 174 | 3.74E-103 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002770.01.T01 | Q8S4Q1 | 88.506 | 174 | 18 | 1 | 46 | 217 | 1 | 174 | 1.79e-103 | 305 |
| MsG0180002770.01.T02 | Q8S4Q1 | 88.506 | 174 | 18 | 1 | 5 | 176 | 1 | 174 | 6.34e-104 | 305 |
| MsG0180002770.01.T03 | Q8S4Q1 | 88.506 | 174 | 18 | 1 | 1 | 172 | 1 | 174 | 6.43e-104 | 305 |
| MsG0180002770.01.T04 | Q8S4Q1 | 86.154 | 130 | 16 | 1 | 1 | 128 | 45 | 174 | 3.09e-71 | 220 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180002770.01 | MsG0180005564.01 | 0.865497 | 5.659860e-65 | 1.845194e-61 |
| MsG0180002770.01 | MsG0480018276.01 | 0.849839 | 2.498200e-60 | 4.798236e-57 |
| MsG0180002770.01 | MsG0480018277.01 | 0.884471 | 1.864901e-71 | 1.231673e-67 |
| MsG0180002770.01 | MsG0680035744.01 | 0.827549 | 1.471192e-54 | 1.424832e-51 |
| MsG0180002770.01 | MsG0780038885.01 | 0.917434 | 5.333899e-86 | 1.539301e-81 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002770.01.T02 | MTR_3g030260 | 64.894 | 188 | 54 | 3 | 1 | 176 | 42 | 229 | 1.41e-75 | 226 |
| MsG0180002770.01.T02 | MTR_2g009950 | 62.903 | 186 | 57 | 3 | 1 | 174 | 42 | 227 | 9.62e-70 | 213 |
| MsG0180002770.01.T02 | MTR_6g033455 | 59.474 | 190 | 63 | 4 | 1 | 176 | 42 | 231 | 5.02e-63 | 194 |
| MsG0180002770.01.T02 | MTR_0510s0010 | 57.895 | 190 | 66 | 4 | 1 | 176 | 49 | 238 | 2.31e-58 | 182 |
| MsG0180002770.01.T02 | MTR_7g016020 | 59.211 | 152 | 50 | 3 | 1 | 140 | 42 | 193 | 3.51e-43 | 147 |
| MsG0180002770.01.T02 | MTR_7g045350 | 62.774 | 137 | 39 | 3 | 51 | 175 | 23 | 159 | 3.85e-43 | 141 |
| MsG0180002770.01.T02 | MTR_2g083020 | 59.868 | 152 | 49 | 4 | 1 | 140 | 42 | 193 | 1.12e-41 | 148 |
| MsG0180002770.01.T02 | MTR_8g461570 | 78.378 | 74 | 15 | 1 | 104 | 176 | 5 | 78 | 1.32e-33 | 114 |
| MsG0180002770.01.T02 | MTR_0012s0290 | 64.228 | 123 | 32 | 3 | 51 | 161 | 1147 | 1269 | 7.66e-33 | 123 |
| MsG0180002770.01.T02 | MTR_7g074720 | 80.822 | 73 | 13 | 1 | 105 | 176 | 2 | 74 | 1.76e-32 | 111 |
| MsG0180002770.01.T02 | MTR_0053s0080 | 51.678 | 149 | 59 | 3 | 1 | 136 | 42 | 190 | 8.37e-27 | 104 |
| MsG0180002770.01.T02 | MTR_5g454260 | 66.667 | 75 | 25 | 0 | 1 | 75 | 42 | 116 | 8.26e-24 | 94.0 |
| MsG0180002770.01.T02 | MTR_3g026190 | 48.598 | 107 | 50 | 2 | 25 | 126 | 825 | 931 | 1.30e-15 | 74.3 |
| MsG0180002770.01.T03 | MTR_3g030260 | 64.130 | 184 | 54 | 3 | 1 | 172 | 46 | 229 | 1.13e-72 | 218 |
| MsG0180002770.01.T03 | MTR_2g009950 | 62.088 | 182 | 57 | 3 | 1 | 170 | 46 | 227 | 7.10e-67 | 206 |
| MsG0180002770.01.T03 | MTR_6g033455 | 58.602 | 186 | 63 | 4 | 1 | 172 | 46 | 231 | 6.27e-60 | 186 |
| MsG0180002770.01.T03 | MTR_0510s0010 | 56.989 | 186 | 66 | 4 | 1 | 172 | 53 | 238 | 2.51e-55 | 174 |
| MsG0180002770.01.T03 | MTR_7g045350 | 62.774 | 137 | 39 | 3 | 47 | 171 | 23 | 159 | 4.49e-43 | 141 |
| MsG0180002770.01.T03 | MTR_7g016020 | 58.108 | 148 | 50 | 3 | 1 | 136 | 46 | 193 | 2.57e-40 | 139 |
| MsG0180002770.01.T03 | MTR_2g083020 | 58.784 | 148 | 49 | 4 | 1 | 136 | 46 | 193 | 4.38e-39 | 141 |
| MsG0180002770.01.T03 | MTR_8g461570 | 78.378 | 74 | 15 | 1 | 100 | 172 | 5 | 78 | 1.35e-33 | 114 |
| MsG0180002770.01.T03 | MTR_0012s0290 | 64.228 | 123 | 32 | 3 | 47 | 157 | 1147 | 1269 | 7.93e-33 | 123 |
| MsG0180002770.01.T03 | MTR_7g074720 | 80.822 | 73 | 13 | 1 | 101 | 172 | 2 | 74 | 1.76e-32 | 111 |
| MsG0180002770.01.T03 | MTR_0053s0080 | 50.345 | 145 | 59 | 3 | 1 | 132 | 46 | 190 | 4.58e-24 | 97.1 |
| MsG0180002770.01.T03 | MTR_5g454260 | 64.789 | 71 | 25 | 0 | 1 | 71 | 46 | 116 | 4.38e-21 | 86.7 |
| MsG0180002770.01.T03 | MTR_3g026190 | 48.598 | 107 | 50 | 2 | 21 | 122 | 825 | 931 | 1.25e-15 | 73.9 |
| MsG0180002770.01.T04 | MTR_3g030260 | 61.151 | 139 | 42 | 3 | 2 | 128 | 91 | 229 | 2.69e-48 | 154 |
| MsG0180002770.01.T04 | MTR_6g033455 | 64.925 | 134 | 35 | 3 | 7 | 128 | 98 | 231 | 6.02e-48 | 154 |
| MsG0180002770.01.T04 | MTR_0510s0010 | 63.043 | 138 | 39 | 3 | 3 | 128 | 101 | 238 | 1.00e-44 | 145 |
| MsG0180002770.01.T04 | MTR_7g045350 | 62.774 | 137 | 39 | 3 | 3 | 127 | 23 | 159 | 8.41e-43 | 138 |
| MsG0180002770.01.T04 | MTR_2g009950 | 58.824 | 136 | 44 | 3 | 3 | 126 | 92 | 227 | 1.56e-42 | 142 |
| MsG0180002770.01.T04 | MTR_8g461570 | 78.378 | 74 | 15 | 1 | 56 | 128 | 5 | 78 | 1.01e-33 | 112 |
| MsG0180002770.01.T04 | MTR_0012s0290 | 64.228 | 123 | 32 | 3 | 3 | 113 | 1147 | 1269 | 9.34e-33 | 121 |
| MsG0180002770.01.T04 | MTR_7g074720 | 80.822 | 73 | 13 | 1 | 57 | 128 | 2 | 74 | 1.61e-32 | 109 |
| MsG0180002770.01.T04 | MTR_7g016020 | 52.941 | 102 | 36 | 3 | 3 | 92 | 92 | 193 | 2.30e-18 | 79.7 |
| MsG0180002770.01.T04 | MTR_2g083020 | 51.961 | 102 | 37 | 3 | 3 | 92 | 92 | 193 | 6.10e-18 | 79.0 |
| MsG0180002770.01.T04 | MTR_3g026190 | 58.025 | 81 | 29 | 2 | 3 | 78 | 851 | 931 | 2.70e-15 | 71.2 |
| MsG0180002770.01.T04 | MTR_0053s0080 | 54.639 | 97 | 33 | 2 | 3 | 88 | 94 | 190 | 1.09e-14 | 69.3 |
| MsG0180002770.01.T01 | MTR_3g030260 | 67.686 | 229 | 62 | 3 | 1 | 217 | 1 | 229 | 9.85e-93 | 271 |
| MsG0180002770.01.T01 | MTR_6g033455 | 61.905 | 231 | 74 | 4 | 1 | 217 | 1 | 231 | 9.90e-87 | 256 |
| MsG0180002770.01.T01 | MTR_2g009950 | 65.639 | 227 | 66 | 3 | 1 | 215 | 1 | 227 | 2.74e-86 | 257 |
| MsG0180002770.01.T01 | MTR_0510s0010 | 58.009 | 231 | 83 | 4 | 1 | 217 | 8 | 238 | 5.06e-77 | 231 |
| MsG0180002770.01.T01 | MTR_7g016020 | 63.731 | 193 | 58 | 3 | 1 | 181 | 1 | 193 | 6.55e-60 | 192 |
| MsG0180002770.01.T01 | MTR_2g083020 | 64.249 | 193 | 57 | 4 | 1 | 181 | 1 | 193 | 4.66e-57 | 193 |
| MsG0180002770.01.T01 | MTR_7g045350 | 62.774 | 137 | 39 | 3 | 92 | 216 | 23 | 159 | 2.35e-42 | 140 |
| MsG0180002770.01.T01 | MTR_0053s0080 | 52.632 | 190 | 77 | 3 | 1 | 177 | 1 | 190 | 6.44e-35 | 127 |
| MsG0180002770.01.T01 | MTR_8g461570 | 78.378 | 74 | 15 | 1 | 145 | 217 | 5 | 78 | 3.98e-33 | 114 |
| MsG0180002770.01.T01 | MTR_0012s0290 | 64.228 | 123 | 32 | 3 | 92 | 202 | 1147 | 1269 | 2.85e-32 | 123 |
| MsG0180002770.01.T01 | MTR_7g074720 | 80.822 | 73 | 13 | 1 | 146 | 217 | 2 | 74 | 5.05e-32 | 111 |
| MsG0180002770.01.T01 | MTR_5g454260 | 63.793 | 116 | 42 | 0 | 1 | 116 | 1 | 116 | 1.01e-30 | 113 |
| MsG0180002770.01.T01 | MTR_3g026190 | 48.598 | 107 | 50 | 2 | 66 | 167 | 825 | 931 | 2.91e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 51 sgRNAs with CRISPR-Local
Find 51 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGACTCTCTCAAACATATT+TGG | 0.156108 | 1:+44866378 | None:intergenic |
| GTGATAAATTCTTCAATCTT+TGG | 0.234620 | 1:+44866481 | None:intergenic |
| GGAGGAATTCCATGAACTTT+AGG | 0.268489 | 1:+44866064 | None:intergenic |
| ATGTGTTGTCCGTCTCATTT+TGG | 0.313383 | 1:-44866017 | MsG0180002770.01.T01:CDS |
| TCCTTTGAAACCCTACGCTT+TGG | 0.349397 | 1:+44866042 | None:intergenic |
| GCCAACAATCAATCCATTCT+TGG | 0.351499 | 1:-44866417 | MsG0180002770.01.T01:CDS |
| CCTTTGAAACCCTACGCTTT+GGG | 0.365038 | 1:+44866043 | None:intergenic |
| GGTATCTTGCATGTTTATCA+TGG | 0.380452 | 1:+44866506 | None:intergenic |
| AGAAGTGATAGAGGTGGTAG+AGG | 0.393182 | 1:-44866226 | MsG0180002770.01.T01:CDS |
| GGAAGAAACATTTGAACAAA+AGG | 0.395964 | 1:-44866187 | MsG0180002770.01.T01:CDS |
| TGAGCAAGGCTGAAATTTAC+CGG | 0.398275 | 1:-44866155 | MsG0180002770.01.T01:CDS |
| ACATTGTTGATATTGTTGAT+AGG | 0.404560 | 1:+44866590 | None:intergenic |
| TCCAAGAATGGATTGATTGT+TGG | 0.413744 | 1:+44866416 | None:intergenic |
| GTCCATGACCTCCTGAACTT+TGG | 0.414042 | 1:+44866102 | None:intergenic |
| TCAGCTGTACCTAAAGTTCA+TGG | 0.424076 | 1:-44866073 | MsG0180002770.01.T01:CDS |
| TTATGAAGATGAGAGATATT+CGG | 0.429317 | 1:-44866565 | MsG0180002770.01.T01:CDS |
| GTTGATTCAAGCACAAATCA+TGG | 0.442225 | 1:-44866448 | MsG0180002770.01.T01:CDS |
| CCTTGTTCAAACCAAAGTTC+AGG | 0.445067 | 1:-44866113 | MsG0180002770.01.T01:CDS |
| GAATGGATTGATTGTTGGCT+TGG | 0.457063 | 1:+44866421 | None:intergenic |
| GTGGCCAACACTGTTGATAA+TGG | 0.457450 | 1:-44866249 | MsG0180002770.01.T01:CDS |
| TAAATTCTTCAATCTTTGGC+TGG | 0.462835 | 1:+44866485 | None:intergenic |
| TTGTTGATAGGATTCATACT+TGG | 0.469352 | 1:+44866602 | None:intergenic |
| GAAGAAACATTTGAACAAAA+GGG | 0.474308 | 1:-44866186 | MsG0180002770.01.T01:CDS |
| GACAAAATCATGGCTGATCA+TGG | 0.485385 | 1:-44866648 | None:intergenic |
| AGAAGTTGTTGTTCAAAATG+AGG | 0.492337 | 1:-44866343 | MsG0180002770.01.T01:CDS |
| CCTGAACTTTGGTTTGAACA+AGG | 0.502302 | 1:+44866113 | None:intergenic |
| CGCAAATTTCATCAATGACC+CGG | 0.514753 | 1:+44866136 | None:intergenic |
| TGTTGATAGGATTCATACTT+GGG | 0.517284 | 1:+44866603 | None:intergenic |
| AACTTTAGGTACAGCTGATG+TGG | 0.527312 | 1:+44866078 | None:intergenic |
| TTCTCCATTATCAACAGTGT+TGG | 0.531055 | 1:+44866245 | None:intergenic |
| AAGACGAACTTCCTCAAGAA+AGG | 0.539436 | 1:-44866284 | MsG0180002770.01.T01:CDS |
| AACCAAAGTTCAGGAGGTCA+TGG | 0.540463 | 1:-44866104 | MsG0180002770.01.T01:CDS |
| TGGAATTCCTCCCAAAGCGT+AGG | 0.545471 | 1:-44866053 | MsG0180002770.01.T01:CDS |
| CCCAAAGCGTAGGGTTTCAA+AGG | 0.548667 | 1:-44866043 | MsG0180002770.01.T01:CDS |
| TCAATATTTGACCTTTCTTG+AGG | 0.555926 | 1:+44866273 | None:intergenic |
| CCAAATATGTTTGAGAGAGT+CGG | 0.559778 | 1:-44866378 | MsG0180002770.01.T01:CDS |
| GGAATTCCTCCCAAAGCGTA+GGG | 0.566799 | 1:-44866052 | MsG0180002770.01.T01:CDS |
| TGATAATGGAGAAGTGATAG+AGG | 0.583165 | 1:-44866235 | MsG0180002770.01.T01:CDS |
| AGAAAGGTCAAATATTGAAG+TGG | 0.590226 | 1:-44866268 | MsG0180002770.01.T01:CDS |
| AGAGGAACGGTTACTTAGCA+AGG | 0.590261 | 1:-44866208 | MsG0180002770.01.T01:CDS |
| AAGAAACATTTGAACAAAAG+GGG | 0.596132 | 1:-44866185 | MsG0180002770.01.T01:CDS |
| TGATAGGATTCATACTTGGG+TGG | 0.604185 | 1:+44866606 | None:intergenic |
| TTGAAACCCTACGCTTTGGG+AGG | 0.607057 | 1:+44866046 | None:intergenic |
| TGATAGAGGTGGTAGAGGAA+CGG | 0.612805 | 1:-44866221 | MsG0180002770.01.T01:CDS |
| GTTACAACATTAGAAGAATG+TGG | 0.625446 | 1:-44866318 | MsG0180002770.01.T01:CDS |
| TAATGGAGAAGTGATAGAGG+TGG | 0.631937 | 1:-44866232 | MsG0180002770.01.T01:CDS |
| TGAGGAAGTTCGTCTTTGTG+TGG | 0.633527 | 1:+44866291 | None:intergenic |
| AAAGGGGAAGAAAGTGAGCA+AGG | 0.636089 | 1:-44866169 | MsG0180002770.01.T01:CDS |
| TGTTCAAACCAAAGTTCAGG+AGG | 0.642083 | 1:-44866110 | MsG0180002770.01.T01:CDS |
| GAGCAAGGCTGAAATTTACC+GGG | 0.643159 | 1:-44866154 | MsG0180002770.01.T01:CDS |
| TTAGGGTGGCCAAAATGAGA+CGG | 0.662957 | 1:+44866008 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAGAAACATTTGAACAAAAG+GGG | - | Chr1:44866462-44866481 | MsG0180002770.01.T01:CDS | 25.0% |
| ! | ACATTGTTGATATTGTTGAT+AGG | + | Chr1:44866060-44866079 | None:intergenic | 25.0% |
| ! | GAAGAAACATTTGAACAAAA+GGG | - | Chr1:44866461-44866480 | MsG0180002770.01.T01:CDS | 25.0% |
| ! | GTGATAAATTCTTCAATCTT+TGG | + | Chr1:44866169-44866188 | None:intergenic | 25.0% |
| ! | TTATGAAGATGAGAGATATT+CGG | - | Chr1:44866082-44866101 | MsG0180002770.01.T01:CDS | 25.0% |
| AGAAAGGTCAAATATTGAAG+TGG | - | Chr1:44866379-44866398 | MsG0180002770.01.T01:CDS | 30.0% | |
| GGAAGAAACATTTGAACAAA+AGG | - | Chr1:44866460-44866479 | MsG0180002770.01.T01:CDS | 30.0% | |
| GTTACAACATTAGAAGAATG+TGG | - | Chr1:44866329-44866348 | MsG0180002770.01.T01:CDS | 30.0% | |
| TAAATTCTTCAATCTTTGGC+TGG | + | Chr1:44866165-44866184 | None:intergenic | 30.0% | |
| TCAATATTTGACCTTTCTTG+AGG | + | Chr1:44866377-44866396 | None:intergenic | 30.0% | |
| ! | AGAAGTTGTTGTTCAAAATG+AGG | - | Chr1:44866304-44866323 | MsG0180002770.01.T01:CDS | 30.0% |
| ! | ATTTTCTTGTTCTCCAAGAA+TGG | + | Chr1:44866246-44866265 | None:intergenic | 30.0% |
| ! | TGTTGATAGGATTCATACTT+GGG | + | Chr1:44866047-44866066 | None:intergenic | 30.0% |
| ! | TTGTTGATAGGATTCATACT+TGG | + | Chr1:44866048-44866067 | None:intergenic | 30.0% |
| CCAAATATGTTTGAGAGAGT+CGG | - | Chr1:44866269-44866288 | MsG0180002770.01.T01:CDS | 35.0% | |
| GGTATCTTGCATGTTTATCA+TGG | + | Chr1:44866144-44866163 | None:intergenic | 35.0% | |
| TTCTCCATTATCAACAGTGT+TGG | + | Chr1:44866405-44866424 | None:intergenic | 35.0% | |
| ! | GTTGATTCAAGCACAAATCA+TGG | - | Chr1:44866199-44866218 | MsG0180002770.01.T01:CDS | 35.0% |
| !! | TCCAAGAATGGATTGATTGT+TGG | + | Chr1:44866234-44866253 | None:intergenic | 35.0% |
| !! | TGATAATGGAGAAGTGATAG+AGG | - | Chr1:44866412-44866431 | MsG0180002770.01.T01:CDS | 35.0% |
| AACTTTAGGTACAGCTGATG+TGG | + | Chr1:44866572-44866591 | None:intergenic | 40.0% | |
| AAGACGAACTTCCTCAAGAA+AGG | - | Chr1:44866363-44866382 | MsG0180002770.01.T01:CDS | 40.0% | |
| CCGACTCTCTCAAACATATT+TGG | + | Chr1:44866272-44866291 | None:intergenic | 40.0% | |
| CCTTGTTCAAACCAAAGTTC+AGG | - | Chr1:44866534-44866553 | MsG0180002770.01.T01:CDS | 40.0% | |
| CGCAAATTTCATCAATGACC+CGG | + | Chr1:44866514-44866533 | None:intergenic | 40.0% | |
| GCCAACAATCAATCCATTCT+TGG | - | Chr1:44866230-44866249 | MsG0180002770.01.T01:CDS | 40.0% | |
| GGAGGAATTCCATGAACTTT+AGG | + | Chr1:44866586-44866605 | None:intergenic | 40.0% | |
| TAATGGAGAAGTGATAGAGG+TGG | - | Chr1:44866415-44866434 | MsG0180002770.01.T01:CDS | 40.0% | |
| TCAGCTGTACCTAAAGTTCA+TGG | - | Chr1:44866574-44866593 | MsG0180002770.01.T01:CDS | 40.0% | |
| TGAGCAAGGCTGAAATTTAC+CGG | - | Chr1:44866492-44866511 | MsG0180002770.01.T01:CDS | 40.0% | |
| TGATAGGATTCATACTTGGG+TGG | + | Chr1:44866044-44866063 | None:intergenic | 40.0% | |
| TGTTCAAACCAAAGTTCAGG+AGG | - | Chr1:44866537-44866556 | MsG0180002770.01.T01:CDS | 40.0% | |
| ! | ATGTGTTGTCCGTCTCATTT+TGG | - | Chr1:44866630-44866649 | MsG0180002770.01.T01:CDS | 40.0% |
| !! | CCTGAACTTTGGTTTGAACA+AGG | + | Chr1:44866537-44866556 | None:intergenic | 40.0% |
| !! | GAATGGATTGATTGTTGGCT+TGG | + | Chr1:44866229-44866248 | None:intergenic | 40.0% |
| AAAGGGGAAGAAAGTGAGCA+AGG | - | Chr1:44866478-44866497 | MsG0180002770.01.T01:CDS | 45.0% | |
| AACCAAAGTTCAGGAGGTCA+TGG | - | Chr1:44866543-44866562 | MsG0180002770.01.T01:CDS | 45.0% | |
| AGAAGTGATAGAGGTGGTAG+AGG | - | Chr1:44866421-44866440 | MsG0180002770.01.T01:CDS | 45.0% | |
| AGAGGAACGGTTACTTAGCA+AGG | - | Chr1:44866439-44866458 | MsG0180002770.01.T01:CDS | 45.0% | |
| GAGCAAGGCTGAAATTTACC+GGG | - | Chr1:44866493-44866512 | MsG0180002770.01.T01:CDS | 45.0% | |
| TGAGGAAGTTCGTCTTTGTG+TGG | + | Chr1:44866359-44866378 | None:intergenic | 45.0% | |
| TGATAGAGGTGGTAGAGGAA+CGG | - | Chr1:44866426-44866445 | MsG0180002770.01.T01:CDS | 45.0% | |
| TTAGGGTGGCCAAAATGAGA+CGG | + | Chr1:44866642-44866661 | None:intergenic | 45.0% | |
| ! | GTGGCCAACACTGTTGATAA+TGG | - | Chr1:44866398-44866417 | MsG0180002770.01.T01:CDS | 45.0% |
| !! | CCTTTGAAACCCTACGCTTT+GGG | + | Chr1:44866607-44866626 | None:intergenic | 45.0% |
| !! | TCCTTTGAAACCCTACGCTT+TGG | + | Chr1:44866608-44866627 | None:intergenic | 45.0% |
| CCCAAAGCGTAGGGTTTCAA+AGG | - | Chr1:44866604-44866623 | MsG0180002770.01.T01:CDS | 50.0% | |
| GGAATTCCTCCCAAAGCGTA+GGG | - | Chr1:44866595-44866614 | MsG0180002770.01.T01:CDS | 50.0% | |
| GTCCATGACCTCCTGAACTT+TGG | + | Chr1:44866548-44866567 | None:intergenic | 50.0% | |
| TGGAATTCCTCCCAAAGCGT+AGG | - | Chr1:44866594-44866613 | MsG0180002770.01.T01:CDS | 50.0% | |
| ! | TTGAAACCCTACGCTTTGGG+AGG | + | Chr1:44866604-44866623 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 44866008 | 44866661 | 44866008 | ID=MsG0180002770.01;Name=MsG0180002770.01 |
| Chr1 | mRNA | 44866008 | 44866661 | 44866008 | ID=MsG0180002770.01.T01;Parent=MsG0180002770.01;Name=MsG0180002770.01.T01;_AED=0.15;_eAED=0.15;_QI=0|-1|0|1|-1|1|1|0|217 |
| Chr1 | exon | 44866008 | 44866661 | 44866008 | ID=MsG0180002770.01.T01:exon:9761;Parent=MsG0180002770.01.T01 |
| Chr1 | CDS | 44866008 | 44866661 | 44866008 | ID=MsG0180002770.01.T01:cds;Parent=MsG0180002770.01.T01 |
| Chr1 | mRNA | 44866008 | 44866538 | 44866008 | ID=MsG0180002770.01.T02;Parent=MsG0180002770.01;Name=MsG0180002770.01.T02;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|0|1|0|176 |
| Chr1 | exon | 44866008 | 44866538 | 44866008 | ID=MsG0180002770.01.T02:exon:9762;Parent=MsG0180002770.01.T02 |
| Chr1 | CDS | 44866008 | 44866538 | 44866008 | ID=MsG0180002770.01.T02:cds;Parent=MsG0180002770.01.T02 |
| Chr1 | mRNA | 44866008 | 44866526 | 44866008 | ID=MsG0180002770.01.T03;Parent=MsG0180002770.01;Name=MsG0180002770.01.T03;_AED=0.22;_eAED=0.23;_QI=0|-1|0|1|-1|0|1|0|172 |
| Chr1 | exon | 44866008 | 44866526 | 44866008 | ID=MsG0180002770.01.T03:exon:9763;Parent=MsG0180002770.01.T03 |
| Chr1 | CDS | 44866008 | 44866526 | 44866008 | ID=MsG0180002770.01.T03:cds;Parent=MsG0180002770.01.T03 |
| Chr1 | mRNA | 44866008 | 44866394 | 44866008 | ID=MsG0180002770.01.T04;Parent=MsG0180002770.01;Name=MsG0180002770.01.T04;_AED=0.29;_eAED=0.30;_QI=0|-1|0|1|-1|0|1|0|128 |
| Chr1 | exon | 44866008 | 44866394 | 44866008 | ID=MsG0180002770.01.T04:exon:9764;Parent=MsG0180002770.01.T04 |
| Chr1 | CDS | 44866008 | 44866394 | 44866008 | ID=MsG0180002770.01.T04:cds;Parent=MsG0180002770.01.T04 |
| Gene Sequence |
| Protein sequence |
