AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003622.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003622.01.T01 MTR_1g066970 83.021 748 35 5 26 773 253 908 0.0 1198
MsG0180003622.01.T01 MTR_4g061180 37.104 221 124 8 565 773 814 1031 9.12e-27 117
MsG0180003622.01.T01 MTR_4g061180 44.444 99 48 2 365 456 673 771 5.71e-13 73.2
MsG0180003622.01.T01 MTR_2g093100 35.294 221 128 8 565 773 779 996 3.62e-23 106
MsG0180003622.01.T01 MTR_3g102480 84.615 39 6 0 513 551 26 64 5.55e-16 75.1
MsG0180003622.01.T01 MTR_5g037350 86.842 38 5 0 517 554 492 529 5.62e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003622.01.T01 AT3G45630 32.589 224 131 8 566 771 755 976 4.49e-19 93.2
MsG0180003622.01.T01 AT3G45630 32.589 224 131 8 566 771 755 976 4.49e-19 93.2
MsG0180003622.01.T01 AT5G60170 31.364 220 128 9 568 770 758 971 2.15e-15 81.3
MsG0180003622.01.T01 AT5G60170 31.364 220 128 9 568 770 760 973 2.17e-15 81.3

Find 227 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAATTGTGACAGAATTTC+AGG 0.180494 1:-65335987 None:intergenic
TATATATATTAAACTCTATT+TGG 0.214080 1:-65336648 None:intergenic
GTTACTGTGACGAAACTTTC+TGG 0.228390 1:+65332648 MsG0180003622.01.T01:CDS
ACTTACATCTAAAGAACTTT+TGG 0.233420 1:-65331885 None:intergenic
TTCATTTGCAGGGCTTGTTT+TGG 0.243269 1:+65330627 MsG0180003622.01.T01:CDS
AACTCGACCGATTCCTCTTT+AGG 0.255910 1:+65332915 MsG0180003622.01.T01:CDS
AATTCTGAACAAACAATTTC+AGG 0.260991 1:-65336512 None:intergenic
CAGCAATCATTTGGGGTTGC+TGG 0.261328 1:+65333476 MsG0180003622.01.T01:CDS
TTTCAGATCATATTGGAAAT+AGG 0.261331 1:+65335506 MsG0180003622.01.T01:CDS
CACTGCCAAGCACTGGAATC+TGG 0.262289 1:+65336059 MsG0180003622.01.T01:three_prime_UTR
GAAGTATTGAATAATGAAAT+AGG 0.264396 1:+65335706 MsG0180003622.01.T01:CDS
CTGATTTGCAGCAATCATTT+GGG 0.265234 1:+65333468 MsG0180003622.01.T01:CDS
AGACAGGCCACTGAAATAAT+TGG 0.270957 1:-65335677 None:intergenic
TTTCCCTTCAATGCACTAAT+AGG 0.272870 1:+65335836 MsG0180003622.01.T01:three_prime_UTR
GCCGACCTTGGCGGTTATTA+TGG 0.274091 1:+65336156 MsG0180003622.01.T01:three_prime_UTR
GAAACTACAATCGAAGTTAT+AGG 0.282433 1:+65336421 MsG0180003622.01.T01:three_prime_UTR
TAAATTATCGCTGCCTTTGC+CGG 0.284152 1:-65333051 None:intergenic
ATTAGTTGTTCAGTCAATTC+AGG 0.284421 1:-65335777 None:intergenic
GCTTCAGATGATGGCTTGAT+TGG 0.295084 1:-65333115 None:intergenic
ATTCGTAACCAGAATCATTC+AGG 0.298934 1:+65333149 MsG0180003622.01.T01:CDS
ATTCAACCACACCAGCCTTT+TGG 0.298993 1:+65332976 MsG0180003622.01.T01:CDS
AAGCAGCCCCTGGCAGGGTT+TGG 0.311969 1:-65332470 None:intergenic
AAGGCTTCCCTGAATGATTC+TGG 0.318324 1:-65333157 None:intergenic
CGGTGCAAGCAGCCCCTGGC+AGG 0.321354 1:-65332476 None:intergenic
CAGTTCAGTAGTAATATTCT+TGG 0.321542 1:+65335622 MsG0180003622.01.T01:CDS
GAAAATAGGCTTAGATGGTT+TGG 0.322680 1:+65334514 MsG0180003622.01.T01:CDS
CCAGATGCATAATTCCCTTT+AGG 0.322792 1:-65333506 None:intergenic
TCAAGACTTTCAGATCATAT+TGG 0.327796 1:+65335499 MsG0180003622.01.T01:CDS
TTCTGTGAGTACAAGCTTCC+TGG 0.329107 1:+65332740 MsG0180003622.01.T01:CDS
TCTGATTTGCAGCAATCATT+TGG 0.331891 1:+65333467 MsG0180003622.01.T01:CDS
AGACTTGTTTCAAATCTGTT+TGG 0.334593 1:+65335953 MsG0180003622.01.T01:three_prime_UTR
ACTCGACCGATTCCTCTTTA+GGG 0.334806 1:+65332916 MsG0180003622.01.T01:CDS
TTTCCTCTGTCTTTCATTAG+TGG 0.335757 1:+65335024 MsG0180003622.01.T01:CDS
GTGCTAAGTTGGTAGAAAAT+AGG 0.336553 1:+65334500 MsG0180003622.01.T01:CDS
AGCAGCCCCTGGCAGGGTTT+GGG 0.337581 1:-65332469 None:intergenic
GGCAGCTCCATTGCTTGAAC+CGG 0.342584 1:-65332064 None:intergenic
TGGTAGAAAATAGGCTTAGA+TGG 0.349489 1:+65334509 MsG0180003622.01.T01:CDS
TTCATCACGTGCTGGTAATC+TGG 0.349908 1:+65332416 MsG0180003622.01.T01:CDS
ATCGAAGTTATAGGCCTTAC+TGG 0.351396 1:+65336430 MsG0180003622.01.T01:three_prime_UTR
ACCTGGACTGATTATTGTCT+TGG 0.354617 1:-65333406 None:intergenic
ATTTGATGGAAGTCTGTCTT+TGG 0.355483 1:+65333610 MsG0180003622.01.T01:CDS
GAATAACGGAATACCGAGTT+TGG 0.358182 1:-65336540 None:intergenic
AAGTATTGAATAATGAAATA+GGG 0.358868 1:+65335707 MsG0180003622.01.T01:CDS
AAGGTTTGCCCCAGGTTAAA+AGG 0.359911 1:-65335397 None:intergenic
CATGCTATGAATGGTGAAAT+AGG 0.361239 1:+65336462 MsG0180003622.01.T01:three_prime_UTR
GTGCTATCGGATAAATTTGA+TGG 0.365279 1:+65333596 MsG0180003622.01.T01:CDS
AAACTCACTGGAAAATTTAG+AGG 0.365826 1:-65333636 None:intergenic
GTTCTATAAGCATCACTTTG+AGG 0.368135 1:-65335535 None:intergenic
TGTATGTACAAAGTTAGTTT+TGG 0.371410 1:+65336601 MsG0180003622.01.T01:three_prime_UTR
ACTAGGGCAAGGTGTGTATC+TGG 0.372035 1:+65332366 MsG0180003622.01.T01:intron
GAATGCAGTTGTTCAGAAAA+TGG 0.376217 1:-65335595 None:intergenic
TTCATATTTCACTCGGGATT+CGG 0.378364 1:+65332872 MsG0180003622.01.T01:CDS
ACACAATTTCAGCCACATAA+AGG 0.380111 1:-65335910 None:intergenic
GAACAGAGTTGTAATAGTTC+TGG 0.383667 1:+65335124 MsG0180003622.01.T01:CDS
TTGAACCGGATTCTTTAATC+TGG 0.391628 1:-65332050 None:intergenic
GTGGCTGATGATACATGTTT+AGG 0.393495 1:-65331851 None:intergenic
AAAGAGGAATCGGTCGAGTT+AGG 0.394430 1:-65332912 None:intergenic
GCTGAAATTGTGTGGCAGTC+TGG 0.395484 1:+65335920 MsG0180003622.01.T01:three_prime_UTR
TCAGCAGCTTCCGTGGGCCT+TGG 0.396088 1:+65332699 MsG0180003622.01.T01:CDS
TCCTCCACTATTCCCCTACT+AGG 0.401309 1:-65335358 None:intergenic
GACTGAACAACTAATATTCA+TGG 0.407825 1:+65335785 MsG0180003622.01.T01:exon
AGATCAAATGGAGGAGAGTC+AGG 0.409734 1:+65334579 MsG0180003622.01.T01:CDS
GCGACTGAATTGAGGAAGTA+AGG 0.414883 1:-65335416 None:intergenic
CTAACAAGGCAGTTTCAAAT+CGG 0.419000 1:+65332790 MsG0180003622.01.T01:CDS
TCTTCTTACAACGGCATCTA+CGG 0.424045 1:-65334554 None:intergenic
GATTGCCGTTGACCATTTGA+TGG 0.426623 1:-65336010 None:intergenic
CTATGGTATTTGACCCTAGT+AGG 0.428418 1:+65335344 MsG0180003622.01.T01:CDS
TGTATCAAGAATAGACCTTT+CGG 0.429650 1:-65332496 None:intergenic
GAAGATGAACTAGTATCCTT+TGG 0.429995 1:-65332396 None:intergenic
GCGCAAAGCAGGTGCTTTGA+AGG 0.432491 1:-65333378 None:intergenic
TGCAGGAAGTGCTGTTGAAT+TGG 0.437192 1:-65332085 None:intergenic
TTACGGTTGTCAGACATAAC+TGG 0.438984 1:+65336092 MsG0180003622.01.T01:three_prime_UTR
CACAATTATATCTTCCCAAA+AGG 0.441190 1:-65332991 None:intergenic
AGATTCAATAGTTAAGTTGT+TGG 0.444149 1:+65333331 MsG0180003622.01.T01:CDS
CAAATAACCAGTGGGGAAGT+TGG 0.446372 1:+65335647 MsG0180003622.01.T01:CDS
GAAGTGATCCGTTGATACTT+AGG 0.447431 1:+65336680 MsG0180003622.01.T01:three_prime_UTR
ATTGATTCCCAAACCCTGCC+AGG 0.447448 1:+65332462 MsG0180003622.01.T01:CDS
ACCAGTACCCTCACTCTTCA+CGG 0.451024 1:-65333222 None:intergenic
CACTTCCTGCAGCCAACTCT+TGG 0.453295 1:+65332097 MsG0180003622.01.T01:CDS
AGAGCCTATTAGTGCATTGA+AGG 0.454023 1:-65335840 None:intergenic
GTTACTCATTAACACACATT+GGG 0.456899 1:-65333686 None:intergenic
AAATTATCGCTGCCTTTGCC+GGG 0.458700 1:-65333050 None:intergenic
CACAATTTCAGCCACATAAA+GGG 0.460767 1:-65335909 None:intergenic
TTGCTTGATGGGAAAGTGTA+TGG 0.460876 1:-65333569 None:intergenic
GATACATGTTTAGGATCATC+TGG 0.463183 1:-65331842 None:intergenic
TATGCATCTGGTGGTTGTAA+TGG 0.463874 1:+65333518 MsG0180003622.01.T01:CDS
CATGTGGTGCGGTGATCTCC+AGG 0.463912 1:-65332758 None:intergenic
CGTGGGCCTTGGTCAAGAAA+AGG 0.470197 1:+65332710 MsG0180003622.01.T01:CDS
AAGAACCAGATTAAAGAATC+CGG 0.476974 1:+65332045 MsG0180003622.01.T01:intron
CTTTCGGTGCAAGCAGCCCC+TGG 0.477164 1:-65332480 None:intergenic
CCTAAAGGGAATTATGCATC+TGG 0.477224 1:+65333506 MsG0180003622.01.T01:CDS
TCAGAATTTGTTTCCAAACT+CGG 0.482425 1:+65336527 MsG0180003622.01.T01:three_prime_UTR
TGTAAGAAGAGTAGATCAAA+TGG 0.483895 1:+65334567 MsG0180003622.01.T01:CDS
ACTGCCAAGCACTGGAATCT+GGG 0.485252 1:+65336060 MsG0180003622.01.T01:three_prime_UTR
GGATGTGCATGGCTCATGTT+CGG 0.485368 1:+65332812 MsG0180003622.01.T01:CDS
GTCACAATTATGCCATCAAA+TGG 0.485642 1:+65335998 MsG0180003622.01.T01:three_prime_UTR
ATGCAAATGCTTCCCTAAAG+AGG 0.485653 1:-65332928 None:intergenic
CTCCATCTGTAAATATCAGC+AGG 0.487534 1:+65335296 MsG0180003622.01.T01:CDS
GTCTTTGGAACTAGATGCAT+GGG 0.488988 1:+65333307 MsG0180003622.01.T01:CDS
AAGTGATCCGTTGATACTTA+GGG 0.493085 1:+65336681 MsG0180003622.01.T01:three_prime_UTR
ATGCTTCCCTAAAGAGGAAT+CGG 0.494776 1:-65332922 None:intergenic
GATAGCACAGAATTGCTTGA+TGG 0.494873 1:-65333581 None:intergenic
TGACCCTAGTAGGGGAATAG+TGG 0.500098 1:+65335354 MsG0180003622.01.T01:CDS
TCAATACTTCAGACATAGAC+AGG 0.502092 1:-65335693 None:intergenic
TGAAGGTACAGATACACTAT+TGG 0.504841 1:-65332562 None:intergenic
TCTTCATTGCGACTGAATTG+AGG 0.507830 1:-65335424 None:intergenic
TTGTCTGGCAAAGGAAAACC+TGG 0.512658 1:-65333423 None:intergenic
ATCAAGCAATTCTGTGCTAT+CGG 0.515337 1:+65333583 MsG0180003622.01.T01:CDS
GAGGAGAGTCAGGTTAAAAG+AGG 0.517218 1:+65334589 MsG0180003622.01.T01:CDS
TCTGTAAATATCAGCAGGAT+AGG 0.517263 1:+65335301 MsG0180003622.01.T01:CDS
ATGCTTATAGAACTAATTCG+AGG 0.518286 1:+65335545 MsG0180003622.01.T01:CDS
TTGCTGGACATGATCCTAAA+GGG 0.518964 1:+65333492 MsG0180003622.01.T01:CDS
TGTTACTCATTAACACACAT+TGG 0.520243 1:-65333687 None:intergenic
TTCTACTATAGGTGCTAAGT+TGG 0.521732 1:+65334489 MsG0180003622.01.T01:intron
TGTTAAAAGATCCCTTTATG+TGG 0.522640 1:+65335898 MsG0180003622.01.T01:three_prime_UTR
ATAAATCCATTACCAAGAGT+TGG 0.523397 1:-65332109 None:intergenic
TAACAAGGCAGTTTCAAATC+GGG 0.527922 1:+65332791 MsG0180003622.01.T01:CDS
GCTCATGCTTCAAGTCCACC+TGG 0.528672 1:+65335052 MsG0180003622.01.T01:CDS
AATGATTCCAATTATTTCAG+TGG 0.530132 1:+65335670 MsG0180003622.01.T01:CDS
CCTCCACTATTCCCCTACTA+GGG 0.530781 1:-65335357 None:intergenic
TTAGCTTCACTGCCAAGCAC+TGG 0.533987 1:+65336052 MsG0180003622.01.T01:three_prime_UTR
AACTTATTCAGCAGCTTCCG+TGG 0.534099 1:+65332692 MsG0180003622.01.T01:CDS
ATTATATCTTCCCAAAAGGC+TGG 0.535132 1:-65332987 None:intergenic
ATCTTCCCAAAAGGCTGGTG+TGG 0.535708 1:-65332982 None:intergenic
GCATGAATTTCCCACCAGTA+AGG 0.536061 1:-65336444 None:intergenic
AAAGAATCCGGTTCAAGCAA+TGG 0.536155 1:+65332057 MsG0180003622.01.T01:CDS
AATCATTCCAACTTCCCCAC+TGG 0.536419 1:-65335654 None:intergenic
ATCAAGCCATCATCTGAAGC+AGG 0.536789 1:+65333118 MsG0180003622.01.T01:CDS
AATCTGGGTCCTATGCATTA+CGG 0.537519 1:+65336075 MsG0180003622.01.T01:three_prime_UTR
AGTATTGAATAATGAAATAG+GGG 0.537525 1:+65335708 MsG0180003622.01.T01:CDS
GTTGCTGGACATGATCCTAA+AGG 0.542234 1:+65333491 MsG0180003622.01.T01:CDS
TATGGTATTTGACCCTAGTA+GGG 0.545322 1:+65335345 MsG0180003622.01.T01:CDS
GTCAGGAGAGCCGACCTTGG+CGG 0.545951 1:+65336147 MsG0180003622.01.T01:three_prime_UTR
TTCGTAACCAGAATCATTCA+GGG 0.546044 1:+65333150 MsG0180003622.01.T01:CDS
TGTCTTTGGAACTAGATGCA+TGG 0.546869 1:+65333306 MsG0180003622.01.T01:CDS
TTGATTCCCAAACCCTGCCA+GGG 0.546915 1:+65332463 MsG0180003622.01.T01:CDS
CAGGGGCTGCTTGCACCGAA+AGG 0.546984 1:+65332481 MsG0180003622.01.T01:CDS
GGTGCAAGCAGCCCCTGGCA+GGG 0.547321 1:-65332475 None:intergenic
TGTTGAGTTCAAGAATCCTA+TGG 0.549167 1:+65335327 MsG0180003622.01.T01:CDS
TTGAAGATTCATATTTCACT+CGG 0.550404 1:+65332865 MsG0180003622.01.T01:CDS
AGGTACAGATACACTATTGG+TGG 0.551077 1:-65332559 None:intergenic
CTTCTTACAACGGCATCTAC+GGG 0.551114 1:-65334553 None:intergenic
CATTACCAAGAGTTGGCTGC+AGG 0.551503 1:-65332102 None:intergenic
GCAGCGATAATTTAGCCTCC+AGG 0.551527 1:+65333060 MsG0180003622.01.T01:CDS
CCATGCATGACAATACTTTG+TGG 0.552172 1:-65330652 None:intergenic
ATACACTAATTAGTGAATAA+CGG 0.552368 1:-65336554 None:intergenic
TGATTTGCAGCAATCATTTG+GGG 0.553932 1:+65333469 MsG0180003622.01.T01:CDS
AGGACCCAGATTCCAGTGCT+TGG 0.554245 1:-65336064 None:intergenic
TCCAAGACAATAATCAGTCC+AGG 0.558162 1:+65333405 MsG0180003622.01.T01:CDS
TAAGCAAACAAGAGTGGGTG+AGG 0.562447 1:-65336032 None:intergenic
TCTTGGTTCAAATAACCAGT+GGG 0.566345 1:+65335639 MsG0180003622.01.T01:CDS
ATAATTGTGACAGAATTTCA+GGG 0.567695 1:-65335986 None:intergenic
TGGTTCAGATGTTGATAACA+AGG 0.567738 1:+65333241 MsG0180003622.01.T01:CDS
GAGAAGACCGTGAAGAGTGA+GGG 0.567760 1:+65333215 MsG0180003622.01.T01:CDS
ACCATAATAACCGCCAAGGT+CGG 0.571077 1:-65336157 None:intergenic
GTTTCAAATCGGGATGTGCA+TGG 0.571822 1:+65332801 MsG0180003622.01.T01:CDS
AAGAAGAGTAGATCAAATGG+AGG 0.572060 1:+65334570 MsG0180003622.01.T01:CDS
TGAGTCAATTGTTATCAATG+AGG 0.573873 1:+65332626 MsG0180003622.01.T01:CDS
AAGTTATAGGCCTTACTGGT+GGG 0.576685 1:+65336434 MsG0180003622.01.T01:three_prime_UTR
AGTTCATCTTCATCACGTGC+TGG 0.577681 1:+65332408 MsG0180003622.01.T01:CDS
TTGAACAAACATCACATTGG+TGG 0.578775 1:+65332588 MsG0180003622.01.T01:CDS
AACTTGATATTCTCATAACT+AGG 0.580208 1:-65335748 None:intergenic
CTACTAGGGTCAAATACCAT+AGG 0.581897 1:-65335343 None:intergenic
TGAAGATTCATATTTCACTC+GGG 0.583365 1:+65332866 MsG0180003622.01.T01:CDS
TTAGGATCATCTGGTGGTGG+AGG 0.584690 1:-65331833 None:intergenic
GTAGGGGAATAGTGGAGGAA+AGG 0.584951 1:+65335362 MsG0180003622.01.T01:CDS
TTGATCTACTCTTCTTACAA+CGG 0.585966 1:-65334563 None:intergenic
ATAGCACAGAATTGCTTGAT+GGG 0.586568 1:-65333580 None:intergenic
CAGATTTGAAACAAGTCTCA+AGG 0.587356 1:-65335948 None:intergenic
AGAGAAGACCGTGAAGAGTG+AGG 0.588042 1:+65333214 MsG0180003622.01.T01:CDS
GGCTCTCAGATGGCAGTGTG+TGG 0.592367 1:+65335857 MsG0180003622.01.T01:three_prime_UTR
TGTTTAGGATCATCTGGTGG+TGG 0.593160 1:-65331836 None:intergenic
ACAATGAGGTGAATAATGCC+TGG 0.593440 1:-65333078 None:intergenic
GAGGAAGTAAGGTTTGCCCC+AGG 0.593890 1:-65335405 None:intergenic
GAAGCTAAGCAAACAAGAGT+GGG 0.594190 1:-65336037 None:intergenic
CCACAAAGTATTGTCATGCA+TGG 0.596103 1:+65330652 MsG0180003622.01.T01:CDS
TGCTTGATGGGAAAGTGTAT+GGG 0.597143 1:-65333568 None:intergenic
AAATGATTGCTGCAAATCAG+AGG 0.597628 1:-65333465 None:intergenic
AGGAAGCTTGTACTCACAGA+AGG 0.598102 1:-65332738 None:intergenic
GGTTCAGTAAAATATTCAGA+AGG 0.600729 1:-65333176 None:intergenic
CTGCTGATATTTACAGATGG+AGG 0.601283 1:-65335295 None:intergenic
GGTGCTTTGAAGGATGTGTA+TGG 0.601951 1:-65333368 None:intergenic
ACTTATTCAGCAGCTTCCGT+GGG 0.602554 1:+65332693 MsG0180003622.01.T01:CDS
GAAGTTATAGGCCTTACTGG+TGG 0.604366 1:+65336433 MsG0180003622.01.T01:three_prime_UTR
AATGTCAGGAGAGCCGACCT+TGG 0.605273 1:+65336144 MsG0180003622.01.T01:three_prime_UTR
TGAAGCTAAGCAAACAAGAG+TGG 0.610309 1:-65336038 None:intergenic
TGTATCTGGCAGTCTTCCAA+AGG 0.610994 1:+65332380 MsG0180003622.01.T01:CDS
ACCGTGAAGAGTGAGGGTAC+TGG 0.611276 1:+65333221 MsG0180003622.01.T01:CDS
ATCCTGCTGATATTTACAGA+TGG 0.611333 1:-65335298 None:intergenic
TGATGTTTGTTCAACTCTGA+AGG 0.613376 1:-65332579 None:intergenic
CTTAGATTCTGAGCACAATG+AGG 0.615109 1:-65333092 None:intergenic
CTCATGCTTCAAGTCCACCT+GGG 0.617092 1:+65335053 MsG0180003622.01.T01:CDS
CCCTAGTAGGGGAATAGTGG+AGG 0.622353 1:+65335357 MsG0180003622.01.T01:CDS
TGACTTACCCTAAGTATCAA+CGG 0.622843 1:-65336688 None:intergenic
TGGGAAATTCATGCTATGAA+TGG 0.624607 1:+65336453 MsG0180003622.01.T01:three_prime_UTR
AACTCACTGGAAAATTTAGA+GGG 0.627206 1:-65333635 None:intergenic
AACAAGGTTTCTTCAGACGT+CGG 0.630644 1:+65333257 MsG0180003622.01.T01:CDS
TTCTTGGTTCAAATAACCAG+TGG 0.634073 1:+65335638 MsG0180003622.01.T01:CDS
CTGTCTGACATTGCAAACCC+AGG 0.638003 1:-65335070 None:intergenic
GTCTGACAACCGTAATGCAT+AGG 0.638270 1:-65336084 None:intergenic
TGCACTAATAGGCTCTCAGA+TGG 0.639965 1:+65335847 MsG0180003622.01.T01:three_prime_UTR
GAGCCTATTAGTGCATTGAA+GGG 0.641833 1:-65335839 None:intergenic
GATCAACAACAACCCGGCAA+AGG 0.642337 1:+65333038 MsG0180003622.01.T01:CDS
GACTGTGATCAACAACAACC+CGG 0.643140 1:+65333032 MsG0180003622.01.T01:CDS
TTATGCCATCAAATGGTCAA+CGG 0.646638 1:+65336005 MsG0180003622.01.T01:three_prime_UTR
TTTATGTGGCTGAAATTGTG+TGG 0.649931 1:+65335912 MsG0180003622.01.T01:three_prime_UTR
TTGTTAGTATTCAAATCATG+TGG 0.654500 1:-65332774 None:intergenic
TGATTCCCAAACCCTGCCAG+GGG 0.654633 1:+65332464 MsG0180003622.01.T01:CDS
ACTCTCCCGCGAGAAAACCC+AGG 0.659154 1:-65335100 None:intergenic
AAAGGGAATTATGCATCTGG+TGG 0.660201 1:+65333509 MsG0180003622.01.T01:CDS
TTGCCACTAATGAAAGACAG+AGG 0.660915 1:-65335027 None:intergenic
TCTGACATTGCAAACCCAGG+TGG 0.667610 1:-65335067 None:intergenic
ATGGTATTTGACCCTAGTAG+GGG 0.670671 1:+65335346 MsG0180003622.01.T01:CDS
ACTCACCATAATAACCGCCA+AGG 0.679005 1:-65336161 None:intergenic
ATGTCAGACAGAATACCACC+TGG 0.679445 1:+65335082 MsG0180003622.01.T01:CDS
ACATGATTTGAATACTAACA+AGG 0.682637 1:+65332776 MsG0180003622.01.T01:CDS
TCATGCATGGCTCAGAAATG+TGG 0.685600 1:+65330665 MsG0180003622.01.T01:CDS
TGAACAACTAATATTCATGG+TGG 0.689343 1:+65335788 MsG0180003622.01.T01:three_prime_UTR
GAGTTGAACAAACATCACAT+TGG 0.697798 1:+65332585 MsG0180003622.01.T01:CDS
CTTGGTTCAAATAACCAGTG+GGG 0.702385 1:+65335640 MsG0180003622.01.T01:CDS
ACAGATGGAGGAGCATACTG+TGG 0.707322 1:-65335283 None:intergenic
TGTCAGACAGAATACCACCT+GGG 0.740545 1:+65335083 MsG0180003622.01.T01:CDS
AGTATTCAAATCATGTGGTG+CGG 0.743229 1:-65332769 None:intergenic
CTCCCGCGAGAAAACCCAGG+TGG 0.744790 1:-65335097 None:intergenic
GTATTGAATAATGAAATAGG+GGG 0.745932 1:+65335709 MsG0180003622.01.T01:CDS
ATGAGGTGAATAATGCCTGG+AGG 0.749776 1:-65333075 None:intergenic
ACATGTTTAGGATCATCTGG+TGG 0.761344 1:-65331839 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTATAATATAAAAAACATT+TGG + Chr1:65334422-65334441 MsG0180003622.01.T01:intron 10.0%
!! TAAATAAAAAAAATGAGTTA+GGG - Chr1:65330967-65330986 None:intergenic 10.0%
!! TATATATATTAAACTCTATT+TGG - Chr1:65336651-65336670 None:intergenic 10.0%
!! TTAAATAAAAAAAATGAGTT+AGG - Chr1:65330968-65330987 None:intergenic 10.0%
!!! TTTTTTTTATTTAACTATAG+AGG + Chr1:65330974-65330993 MsG0180003622.01.T01:intron 10.0%
!! AAAAAAATAAAAAAACTCAC+TGG - Chr1:65333651-65333670 None:intergenic 15.0%
!! AAATTTATCAATTGATCATT+TGG + Chr1:65334447-65334466 MsG0180003622.01.T01:intron 15.0%
!!! AAGTATTGAATAATGAAATA+GGG + Chr1:65335707-65335726 MsG0180003622.01.T01:CDS 15.0%
!!! TTCTACTATTTTGTTTTTTT+AGG + Chr1:65331968-65331987 MsG0180003622.01.T01:intron 15.0%
!!! TTCTGTTTTATTTTATTATG+TGG + Chr1:65334175-65334194 MsG0180003622.01.T01:intron 15.0%
!!! TTTTTTTACTTTTCTACTAT+AGG + Chr1:65334478-65334497 MsG0180003622.01.T01:intron 15.0%
!! ATAATGCATCTTTAATAAAG+CGG + Chr1:65334818-65334837 MsG0180003622.01.T01:intron 20.0%
!! ATACACTAATTAGTGAATAA+CGG - Chr1:65336557-65336576 None:intergenic 20.0%
!! ATTCAAAAGTTCAATCAAAA+TGG - Chr1:65331339-65331358 None:intergenic 20.0%
!! ATTCTTGATACAAAAAAATC+AGG + Chr1:65332507-65332526 MsG0180003622.01.T01:CDS 20.0%
!! CATATAAAAGGCAAAATTTA+AGG - Chr1:65336322-65336341 None:intergenic 20.0%
!! GATAATTTATATAGTATGTG+AGG - Chr1:65331177-65331196 None:intergenic 20.0%
!! GTATATCTATAGTATTATTC+CGG + Chr1:65330787-65330806 MsG0180003622.01.T01:intron 20.0%
!! TAACAAAATTTGATGTTCAT+GGG + Chr1:65334096-65334115 MsG0180003622.01.T01:intron 20.0%
!! TACTATATAAATTATCTTGC+TGG + Chr1:65331181-65331200 MsG0180003622.01.T01:intron 20.0%
!! TTAACAAAATTTGATGTTCA+TGG + Chr1:65334095-65334114 MsG0180003622.01.T01:intron 20.0%
!! TTCTTGATACAAAAAAATCA+GGG + Chr1:65332508-65332527 MsG0180003622.01.T01:CDS 20.0%
!!! AGTATTGAATAATGAAATAG+GGG + Chr1:65335708-65335727 MsG0180003622.01.T01:CDS 20.0%
!!! CAAAATTTAAGGTATAAACA+TGG - Chr1:65336311-65336330 None:intergenic 20.0%
!!! GAAGTATTGAATAATGAAAT+AGG + Chr1:65335706-65335725 MsG0180003622.01.T01:CDS 20.0%
!!! GTAATGGATTTATGAATATT+TGG + Chr1:65332119-65332138 MsG0180003622.01.T01:intron 20.0%
!!! TATAGTTGCACTTTTTTAAT+AGG - Chr1:65334408-65334427 None:intergenic 20.0%
!!! TATATCTAACATTTTGTCTT+TGG + Chr1:65333292-65333311 MsG0180003622.01.T01:CDS 20.0%
!!! TATTATGGTGAGTTTTAAAT+TGG + Chr1:65336171-65336190 MsG0180003622.01.T01:intron 20.0%
!!! TTTGGTAGTTCAAATTTTAA+TGG + Chr1:65331417-65331436 MsG0180003622.01.T01:intron 20.0%
!!! TTTGTTTTTTGTTTTTTGAG+AGG + Chr1:65334001-65334020 MsG0180003622.01.T01:intron 20.0%
! AAAACTGAAAAGATAACACA+GGG + Chr1:65330874-65330893 MsG0180003622.01.T01:intron 25.0%
! AACCATTCGAAAATATTTAG+AGG + Chr1:65334642-65334661 MsG0180003622.01.T01:intron 25.0%
! AACTCTATTTGGTAAAAAGT+TGG - Chr1:65336640-65336659 None:intergenic 25.0%
! AACTTGATATTCTCATAACT+AGG - Chr1:65335751-65335770 None:intergenic 25.0%
! AATGATTCCAATTATTTCAG+TGG + Chr1:65335670-65335689 MsG0180003622.01.T01:CDS 25.0%
! AATTAGTATTAGCATTTGCA+AGG + Chr1:65331279-65331298 MsG0180003622.01.T01:intron 25.0%
! AATTCTGAACAAACAATTTC+AGG - Chr1:65336515-65336534 None:intergenic 25.0%
! ACAAATATGTCAAACAAGTA+TGG + Chr1:65331566-65331585 MsG0180003622.01.T01:intron 25.0%
! ACATGATTTGAATACTAACA+AGG + Chr1:65332776-65332795 MsG0180003622.01.T01:CDS 25.0%
! ACTAAAAAAAATGCTAGAAG+TGG - Chr1:65332319-65332338 None:intergenic 25.0%
! ATAATTGTGACAGAATTTCA+GGG - Chr1:65335989-65336008 None:intergenic 25.0%
! ATACTTGTTTGACATATTTG+TGG - Chr1:65331567-65331586 None:intergenic 25.0%
! ATTAATGAACATTACTTCTG+TGG + Chr1:65331908-65331927 MsG0180003622.01.T01:intron 25.0%
! CAAATATGTCAAACAAGTAT+GGG + Chr1:65331567-65331586 MsG0180003622.01.T01:intron 25.0%
! CATTAATTTAGTGCTTCTAT+AGG + Chr1:65334070-65334089 MsG0180003622.01.T01:intron 25.0%
! GATGTCTTTATGAAGTTATT+TGG + Chr1:65334223-65334242 MsG0180003622.01.T01:intron 25.0%
! GTATTGAATAATGAAATAGG+GGG + Chr1:65335709-65335728 MsG0180003622.01.T01:CDS 25.0%
! GTGGTAAACTTATTTATTGT+GGG + Chr1:65331927-65331946 MsG0180003622.01.T01:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG - Chr1:65334682-65334701 None:intergenic 25.0%
! TAAAACTGAAAAGATAACAC+AGG + Chr1:65330873-65330892 MsG0180003622.01.T01:intron 25.0%
! TAATAGCTATGACATAATGT+TGG + Chr1:65334041-65334060 MsG0180003622.01.T01:intron 25.0%
! TACCAAATGAATACACAATA+TGG - Chr1:65331404-65331423 None:intergenic 25.0%
! TACGTAAGGAAATAATTTAG+TGG - Chr1:65331047-65331066 None:intergenic 25.0%
! TATTATTCCGGAAATAATTC+TGG + Chr1:65330799-65330818 MsG0180003622.01.T01:intron 25.0%
! TCAGAAACTGATCATATAAA+AGG - Chr1:65336334-65336353 None:intergenic 25.0%
! TCTTGATACAAAAAAATCAG+GGG + Chr1:65332509-65332528 MsG0180003622.01.T01:CDS 25.0%
! TGACATATTTGTGGAAATTA+TGG - Chr1:65331558-65331577 None:intergenic 25.0%
! TGCTAATACTAATTCATCTT+TGG - Chr1:65331273-65331292 None:intergenic 25.0%
! TGGATTAAACTTTGTAGAAT+GGG + Chr1:65330765-65330784 MsG0180003622.01.T01:intron 25.0%
! TGTGGTAAACTTATTTATTG+TGG + Chr1:65331926-65331945 MsG0180003622.01.T01:intron 25.0%
! TTATTCCTGTATATATGTTC+TGG + Chr1:65334201-65334220 MsG0180003622.01.T01:intron 25.0%
! TTGAAGATTCATATTTCACT+CGG + Chr1:65332865-65332884 MsG0180003622.01.T01:CDS 25.0%
! TTGTTAGTATTCAAATCATG+TGG - Chr1:65332777-65332796 None:intergenic 25.0%
! TTTCAGATCATATTGGAAAT+AGG + Chr1:65335506-65335525 MsG0180003622.01.T01:CDS 25.0%
!! ACTTACATCTAAAGAACTTT+TGG - Chr1:65331888-65331907 None:intergenic 25.0%
!! AGATTCAATAGTTAAGTTGT+TGG + Chr1:65333331-65333350 MsG0180003622.01.T01:CDS 25.0%
!! ATCTTCTTTGATTGTAGTTT+TGG + Chr1:65331724-65331743 MsG0180003622.01.T01:intron 25.0%
!! TGGATTTTTCCTTAAAAATC+CGG + Chr1:65333867-65333886 MsG0180003622.01.T01:intron 25.0%
!! TTTTGTCTTTTGTGTGTTAA+AGG + Chr1:65331747-65331766 MsG0180003622.01.T01:intron 25.0%
!!! ACTTTTTGGTATATTGTACT+AGG + Chr1:65332349-65332368 MsG0180003622.01.T01:intron 25.0%
!!! ATCTTTTAACATTTTGAGAC+AGG - Chr1:65335889-65335908 None:intergenic 25.0%
!!! CTTTTTGGTATATTGTACTA+GGG + Chr1:65332350-65332369 MsG0180003622.01.T01:intron 25.0%
!!! TCTATTTTTGCAGTTAAACT+GGG + Chr1:65336371-65336390 MsG0180003622.01.T01:intron 25.0%
!!! TGTATGTACAAAGTTAGTTT+TGG + Chr1:65336601-65336620 MsG0180003622.01.T01:three_prime_UTR 25.0%
AAACATATCATGATACACCA+AGG - Chr1:65334877-65334896 None:intergenic 30.0%
AAACTCACTGGAAAATTTAG+AGG - Chr1:65333639-65333658 None:intergenic 30.0%
AAATAAAGAGGTCATACAGA+AGG - Chr1:65331623-65331642 None:intergenic 30.0%
AACATATCATGATACACCAA+GGG - Chr1:65334876-65334895 None:intergenic 30.0%
AACTCACTGGAAAATTTAGA+GGG - Chr1:65333638-65333657 None:intergenic 30.0%
AACTGCCATAAAAATATAGC+TGG - Chr1:65332270-65332289 None:intergenic 30.0%
AAGAACCAGATTAAAGAATC+CGG + Chr1:65332045-65332064 MsG0180003622.01.T01:intron 30.0%
AAGTACTTCATCTTTGAGTA+TGG + Chr1:65333715-65333734 MsG0180003622.01.T01:intron 30.0%
AATAATTTGAATCGTCCTTC+AGG + Chr1:65331800-65331819 MsG0180003622.01.T01:intron 30.0%
AATTAAGTAGCAGATTGCAT+GGG - Chr1:65331095-65331114 None:intergenic 30.0%
AGGAAATAATTTAGTGGTTC+AGG - Chr1:65331041-65331060 None:intergenic 30.0%
ATAAACATGGAGCAATCTTA+GGG - Chr1:65336298-65336317 None:intergenic 30.0%
ATAAATCCATTACCAAGAGT+TGG - Chr1:65332112-65332131 None:intergenic 30.0%
ATAATTTGAATCGTCCTTCA+GGG + Chr1:65331801-65331820 MsG0180003622.01.T01:intron 30.0%
ATATTTAGAGGTCAATGAGT+TGG + Chr1:65334654-65334673 MsG0180003622.01.T01:intron 30.0%
ATCAACAATGTTGCAATCTT+TGG + Chr1:65334257-65334276 MsG0180003622.01.T01:intron 30.0%
ATCATGCATAACATAGTCTT+AGG + Chr1:65331527-65331546 MsG0180003622.01.T01:intron 30.0%
ATGCTTATAGAACTAATTCG+AGG + Chr1:65335545-65335564 MsG0180003622.01.T01:CDS 30.0%
ATTAGTTGTTCAGTCAATTC+AGG - Chr1:65335780-65335799 None:intergenic 30.0%
CACAATTATATCTTCCCAAA+AGG - Chr1:65332994-65333013 None:intergenic 30.0%
CACTTAATTGATGGAGTAAA+TGG + Chr1:65333921-65333940 MsG0180003622.01.T01:intron 30.0%
CAGTTCAGTAGTAATATTCT+TGG + Chr1:65335622-65335641 MsG0180003622.01.T01:CDS 30.0%
CATAATTGTGACAGAATTTC+AGG - Chr1:65335990-65336009 None:intergenic 30.0%
CTAATATAGACCATAGTAGT+AGG + Chr1:65331149-65331168 MsG0180003622.01.T01:intron 30.0%
CTACTACTATGGTCTATATT+AGG - Chr1:65331151-65331170 None:intergenic 30.0%
CTGGATTAAACTTTGTAGAA+TGG + Chr1:65330764-65330783 MsG0180003622.01.T01:intron 30.0%
GAAACTACAATCGAAGTTAT+AGG + Chr1:65336421-65336440 MsG0180003622.01.T01:three_prime_UTR 30.0%
GACCATATTGTGTATTCATT+TGG + Chr1:65331399-65331418 MsG0180003622.01.T01:intron 30.0%
GACTGAACAACTAATATTCA+TGG + Chr1:65335785-65335804 MsG0180003622.01.T01:exon 30.0%
GGTTCAGTAAAATATTCAGA+AGG - Chr1:65333179-65333198 None:intergenic 30.0%
GTTACTCATTAACACACATT+GGG - Chr1:65333689-65333708 None:intergenic 30.0%
TAAGTGAACGAGAAAGATAA+AGG - Chr1:65333907-65333926 None:intergenic 30.0%
TAATTAAGTAGCAGATTGCA+TGG - Chr1:65331096-65331115 None:intergenic 30.0%
TATAAACATGGAGCAATCTT+AGG - Chr1:65336299-65336318 None:intergenic 30.0%
TCAAGACTTTCAGATCATAT+TGG + Chr1:65335499-65335518 MsG0180003622.01.T01:CDS 30.0%
TGAAAGCAATCAAACTTAAG+AGG - Chr1:65331481-65331500 None:intergenic 30.0%
TGAACAACTAATATTCATGG+TGG + Chr1:65335788-65335807 MsG0180003622.01.T01:three_prime_UTR 30.0%
TGAAGATTCATATTTCACTC+GGG + Chr1:65332866-65332885 MsG0180003622.01.T01:CDS 30.0%
TGAGTCAATTGTTATCAATG+AGG + Chr1:65332626-65332645 MsG0180003622.01.T01:CDS 30.0%
TGTAAGAAGAGTAGATCAAA+TGG + Chr1:65334567-65334586 MsG0180003622.01.T01:CDS 30.0%
TGTATCAAGAATAGACCTTT+CGG - Chr1:65332499-65332518 None:intergenic 30.0%
TGTTAAAAGATCCCTTTATG+TGG + Chr1:65335898-65335917 MsG0180003622.01.T01:three_prime_UTR 30.0%
TGTTACTCATTAACACACAT+TGG - Chr1:65333690-65333709 None:intergenic 30.0%
TGTTTGTATCTACATGATCA+TGG + Chr1:65331227-65331246 MsG0180003622.01.T01:intron 30.0%
TTGATCTACTCTTCTTACAA+CGG - Chr1:65334566-65334585 None:intergenic 30.0%
TTTCTCGTTCACTTAATTGA+TGG + Chr1:65333912-65333931 MsG0180003622.01.T01:intron 30.0%
! AATAGTACACCTTTTAACCT+GGG + Chr1:65335388-65335407 MsG0180003622.01.T01:CDS 30.0%
! AATATTTTACTGAACCCTTG+GGG + Chr1:65333183-65333202 MsG0180003622.01.T01:CDS 30.0%
! AGACTTGTTTCAAATCTGTT+TGG + Chr1:65335953-65335972 MsG0180003622.01.T01:three_prime_UTR 30.0%
! ATAGATTCTCCGGATTTTTA+AGG - Chr1:65333879-65333898 None:intergenic 30.0%
! ATTCAAGGAATCATTTTGTC+TGG - Chr1:65333441-65333460 None:intergenic 30.0%
! CTCTTGTAAATCTACGATTT+TGG - Chr1:65330843-65330862 None:intergenic 30.0%
! GAATATTTTACTGAACCCTT+GGG + Chr1:65333182-65333201 MsG0180003622.01.T01:CDS 30.0%
! GACCTCTAAATATTTTCGAA+TGG - Chr1:65334647-65334666 None:intergenic 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - Chr1:65334625-65334644 None:intergenic 30.0%
! TAAGTGTTTTCTTTCCAATC+AGG + Chr1:65333742-65333761 MsG0180003622.01.T01:intron 30.0%
! TATGACCTCTTTATTTGTCT+TGG + Chr1:65331627-65331646 MsG0180003622.01.T01:intron 30.0%
! TCAATGTCTTTTTACTTCTC+TGG + Chr1:65331447-65331466 MsG0180003622.01.T01:intron 30.0%
! TCAGAATTTGTTTCCAAACT+CGG + Chr1:65336527-65336546 MsG0180003622.01.T01:three_prime_UTR 30.0%
! TGAATATTTTACTGAACCCT+TGG + Chr1:65333181-65333200 MsG0180003622.01.T01:CDS 30.0%
! TGGTTTTTGATAGAACACTA+TGG + Chr1:65334686-65334705 MsG0180003622.01.T01:intron 30.0%
! TTTTCGAATGGTTTCTCTAA+TGG - Chr1:65334635-65334654 None:intergenic 30.0%
! TTTTGTGTGTTAAAGGAGTA+GGG + Chr1:65331754-65331773 MsG0180003622.01.T01:intron 30.0%
!! AACGATGTCAACTTTTTCTA+TGG + Chr1:65336117-65336136 MsG0180003622.01.T01:three_prime_UTR 30.0%
!! ACGATGTCAACTTTTTCTAT+GGG + Chr1:65336118-65336137 MsG0180003622.01.T01:three_prime_UTR 30.0%
!! CTTTTGGGAAGATATAATTG+TGG + Chr1:65332992-65333011 MsG0180003622.01.T01:CDS 30.0%
!! GAAGTGGATTTGTTATTTCA+TGG - Chr1:65332303-65332322 None:intergenic 30.0%
!! GCTTTAAAACTAGCCAATTA+AGG + Chr1:65334361-65334380 MsG0180003622.01.T01:intron 30.0%
!!! CAAATCAGAGGTTTTATTCA+AGG - Chr1:65333456-65333475 None:intergenic 30.0%
!!! CTCTATTTTTGCAGTTAAAC+TGG + Chr1:65336370-65336389 MsG0180003622.01.T01:intron 30.0%
!!! GTTGCACTTTTTTAATAGGT+TGG - Chr1:65334404-65334423 None:intergenic 30.0%
!!! TCGCATTAATTTGTTTTGCA+TGG + Chr1:65332147-65332166 MsG0180003622.01.T01:intron 30.0%
AAACAAGTATGGGTATGTCA+TGG + Chr1:65331577-65331596 MsG0180003622.01.T01:intron 35.0%
AAAGGTGAGAATAGATTCTC+CGG - Chr1:65333889-65333908 None:intergenic 35.0%
AAATGAGTAGTCCTACAAGT+CGG - Chr1:65330928-65330947 None:intergenic 35.0%
AAATGATTGCTGCAAATCAG+AGG - Chr1:65333468-65333487 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG + Chr1:65334570-65334589 MsG0180003622.01.T01:CDS 35.0%
AAGTGATCCGTTGATACTTA+GGG + Chr1:65336681-65336700 MsG0180003622.01.T01:three_prime_UTR 35.0%
ACACAATTTCAGCCACATAA+AGG - Chr1:65335913-65335932 None:intergenic 35.0%
ACATAGTAGCACAAAGATGT+AGG - Chr1:65330738-65330757 None:intergenic 35.0%
ACTGGTACCAGAATTATTTC+CGG - Chr1:65330809-65330828 None:intergenic 35.0%
AGTATTCAAATCATGTGGTG+CGG - Chr1:65332772-65332791 None:intergenic 35.0%
ATAGCACAGAATTGCTTGAT+GGG - Chr1:65333583-65333602 None:intergenic 35.0%
ATCAAGCAATTCTGTGCTAT+CGG + Chr1:65333583-65333602 MsG0180003622.01.T01:CDS 35.0%
ATCCAATTAATTGAGCAAGC+AGG - Chr1:65333852-65333871 None:intergenic 35.0%
ATCCTGCTGATATTTACAGA+TGG - Chr1:65335301-65335320 None:intergenic 35.0%
ATCCTGCTTGCTCAATTAAT+TGG + Chr1:65333847-65333866 MsG0180003622.01.T01:intron 35.0%
ATGAGTTAGGGTGAAGAAAA+AGG - Chr1:65330955-65330974 None:intergenic 35.0%
ATGCATCTTTAATAAAGCGG+AGG + Chr1:65334821-65334840 MsG0180003622.01.T01:intron 35.0%
ATTATATCTTCCCAAAAGGC+TGG - Chr1:65332990-65333009 None:intergenic 35.0%
ATTCGTAACCAGAATCATTC+AGG + Chr1:65333149-65333168 MsG0180003622.01.T01:CDS 35.0%
ATTTCCTTACGTACATCACT+AGG + Chr1:65331054-65331073 MsG0180003622.01.T01:intron 35.0%
ATTTGATGGAAGTCTGTCTT+TGG + Chr1:65333610-65333629 MsG0180003622.01.T01:CDS 35.0%
CACAATTTCAGCCACATAAA+GGG - Chr1:65335912-65335931 None:intergenic 35.0%
CATGCTATGAATGGTGAAAT+AGG + Chr1:65336462-65336481 MsG0180003622.01.T01:three_prime_UTR 35.0%
CTAACAAGGCAGTTTCAAAT+CGG + Chr1:65332790-65332809 MsG0180003622.01.T01:CDS 35.0%
GAAAATAGGCTTAGATGGTT+TGG + Chr1:65334514-65334533 MsG0180003622.01.T01:CDS 35.0%
GAAATAATTCTGGTACCAGT+AGG + Chr1:65330809-65330828 MsG0180003622.01.T01:intron 35.0%
GAACAGAGTTGTAATAGTTC+TGG + Chr1:65335124-65335143 MsG0180003622.01.T01:CDS 35.0%
GAAGATGAACTAGTATCCTT+TGG - Chr1:65332399-65332418 None:intergenic 35.0%
GAATGCAGTTGTTCAGAAAA+TGG - Chr1:65335598-65335617 None:intergenic 35.0%
GACAATACAGAAAACCTGAT+TGG - Chr1:65333759-65333778 None:intergenic 35.0%
GACATCCAGAACATATATAC+AGG - Chr1:65334209-65334228 None:intergenic 35.0%
GACTATGTTATGCATGATGT+AGG - Chr1:65331525-65331544 None:intergenic 35.0%
GAGTTGAACAAACATCACAT+TGG + Chr1:65332585-65332604 MsG0180003622.01.T01:CDS 35.0%
GCAATCCAAGACAAATAAAG+AGG - Chr1:65331635-65331654 None:intergenic 35.0%
GTCACAATTATGCCATCAAA+TGG + Chr1:65335998-65336017 MsG0180003622.01.T01:three_prime_UTR 35.0%
GTGCTATCGGATAAATTTGA+TGG + Chr1:65333596-65333615 MsG0180003622.01.T01:CDS 35.0%
GTTCTATAAGCATCACTTTG+AGG - Chr1:65335538-65335557 None:intergenic 35.0%
TAACAAGGCAGTTTCAAATC+GGG + Chr1:65332791-65332810 MsG0180003622.01.T01:CDS 35.0%
TACTTCATCTTTGAGTATGG+TGG + Chr1:65333718-65333737 MsG0180003622.01.T01:intron 35.0%
TAGCATTTGCAAGGTATGAT+TGG + Chr1:65331288-65331307 MsG0180003622.01.T01:intron 35.0%
TATATTAGGATACAGCGGAA+AGG - Chr1:65331137-65331156 None:intergenic 35.0%
TATGGTATTTGACCCTAGTA+GGG + Chr1:65335345-65335364 MsG0180003622.01.T01:CDS 35.0%
TCAATACTTCAGACATAGAC+AGG - Chr1:65335696-65335715 None:intergenic 35.0%
TCTGTAAATATCAGCAGGAT+AGG + Chr1:65335301-65335320 MsG0180003622.01.T01:CDS 35.0%
TCTTGGTTCAAATAACCAGT+GGG + Chr1:65335639-65335658 MsG0180003622.01.T01:CDS 35.0%
TGAAACACATTCATTGTCGA+TGG + Chr1:65333957-65333976 MsG0180003622.01.T01:intron 35.0%
TGACTTACCCTAAGTATCAA+CGG - Chr1:65336691-65336710 None:intergenic 35.0%
TGATGTTTGTTCAACTCTGA+AGG - Chr1:65332582-65332601 None:intergenic 35.0%
TGGGAAATTCATGCTATGAA+TGG + Chr1:65336453-65336472 MsG0180003622.01.T01:three_prime_UTR 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + Chr1:65334509-65334528 MsG0180003622.01.T01:CDS 35.0%
TGGTCTATATTAGGATACAG+CGG - Chr1:65331142-65331161 None:intergenic 35.0%
TGTTGAGTTCAAGAATCCTA+TGG + Chr1:65335327-65335346 MsG0180003622.01.T01:CDS 35.0%
TTAGGGCAGAGATTTCAAAA+GGG - Chr1:65336281-65336300 None:intergenic 35.0%
TTATGCCATCAAATGGTCAA+CGG + Chr1:65336005-65336024 MsG0180003622.01.T01:three_prime_UTR 35.0%
TTCATATTTCACTCGGGATT+CGG + Chr1:65332872-65332891 MsG0180003622.01.T01:CDS 35.0%
TTCGTAACCAGAATCATTCA+GGG + Chr1:65333150-65333169 MsG0180003622.01.T01:CDS 35.0%
TTCTACTATAGGTGCTAAGT+TGG + Chr1:65334489-65334508 MsG0180003622.01.T01:intron 35.0%
TTCTTGGTTCAAATAACCAG+TGG + Chr1:65335638-65335657 MsG0180003622.01.T01:CDS 35.0%
TTGAACAAACATCACATTGG+TGG + Chr1:65332588-65332607 MsG0180003622.01.T01:CDS 35.0%
TTGAACCGGATTCTTTAATC+TGG - Chr1:65332053-65332072 None:intergenic 35.0%
TTTATGTGGCTGAAATTGTG+TGG + Chr1:65335912-65335931 MsG0180003622.01.T01:three_prime_UTR 35.0%
TTTCCCTTCAATGCACTAAT+AGG + Chr1:65335836-65335855 MsG0180003622.01.T01:three_prime_UTR 35.0%
TTTCCTCTGTCTTTCATTAG+TGG + Chr1:65335024-65335043 MsG0180003622.01.T01:CDS 35.0%
! AGAACTTTTGGACACTACTT+TGG - Chr1:65331876-65331895 None:intergenic 35.0%
! AGTTCTGGTATAACTCTTCA+TGG + Chr1:65335139-65335158 MsG0180003622.01.T01:intron 35.0%
! ATAGTACACCTTTTAACCTG+GGG + Chr1:65335389-65335408 MsG0180003622.01.T01:CDS 35.0%
! ATATTTTACTGAACCCTTGG+GGG + Chr1:65333184-65333203 MsG0180003622.01.T01:CDS 35.0%
! CAATGAGTTGGATCCAAATA+TGG + Chr1:65334666-65334685 MsG0180003622.01.T01:intron 35.0%
! CAGATTTGAAACAAGTCTCA+AGG - Chr1:65335951-65335970 None:intergenic 35.0%
! CTGATTTGCAGCAATCATTT+GGG + Chr1:65333468-65333487 MsG0180003622.01.T01:CDS 35.0%
! CTGGTTCTTAATTGTCAAGA+TGG - Chr1:65332034-65332053 None:intergenic 35.0%
! CTTGTAGGACTACTCATTTT+CGG + Chr1:65330929-65330948 MsG0180003622.01.T01:intron 35.0%
! CTTGTGAATGGAAAGTATGA+TGG + Chr1:65334133-65334152 MsG0180003622.01.T01:intron 35.0%
! CTTTTGTGTGTTAAAGGAGT+AGG + Chr1:65331753-65331772 MsG0180003622.01.T01:intron 35.0%
! GAATAGTACACCTTTTAACC+TGG + Chr1:65335387-65335406 MsG0180003622.01.T01:CDS 35.0%
! GATACATGTTTAGGATCATC+TGG - Chr1:65331845-65331864 None:intergenic 35.0%
! TCTGATTTGCAGCAATCATT+TGG + Chr1:65333467-65333486 MsG0180003622.01.T01:CDS 35.0%
! TCTTTTTACTTCTCTGGTGT+TGG + Chr1:65331453-65331472 MsG0180003622.01.T01:intron 35.0%
! TGAAGGTACAGATACACTAT+TGG - Chr1:65332565-65332584 None:intergenic 35.0%
! TGAGAGTATGTCTAACTAGA+AGG - Chr1:65331666-65331685 None:intergenic 35.0%
! TGATTTGCAGCAATCATTTG+GGG + Chr1:65333469-65333488 MsG0180003622.01.T01:CDS 35.0%
! TGTGCTACTATGTTAGAAAC+TGG + Chr1:65330745-65330764 MsG0180003622.01.T01:intron 35.0%
! TTCAAAAGGGAAAGTACAAG+TGG - Chr1:65336268-65336287 None:intergenic 35.0%
! TTCTGTCATTTGCTTGTGAA+TGG + Chr1:65334121-65334140 MsG0180003622.01.T01:intron 35.0%
! TTGTAGCACCAATGATTTGT+AGG - Chr1:65331781-65331800 None:intergenic 35.0%
! TTTTCTATGGGGTAAATGTC+AGG + Chr1:65336130-65336149 MsG0180003622.01.T01:three_prime_UTR 35.0%
!! ATAGTAGAAGTTTTGTCCCT+TGG + Chr1:65334857-65334876 MsG0180003622.01.T01:intron 35.0%
!! CGATGTCAACTTTTTCTATG+GGG + Chr1:65336119-65336138 MsG0180003622.01.T01:three_prime_UTR 35.0%
!! CGTCACCAGCTATATTTTTA+TGG + Chr1:65332262-65332281 MsG0180003622.01.T01:intron 35.0%
!! GGTGGTTATTTTCATTTGCA+GGG + Chr1:65330617-65330636 MsG0180003622.01.T01:CDS 35.0%
!! GTGCATGAACTTTAGCTTTA+CGG + Chr1:65334316-65334335 MsG0180003622.01.T01:intron 35.0%
!! GTGCTAAGTTGGTAGAAAAT+AGG + Chr1:65334500-65334519 MsG0180003622.01.T01:CDS 35.0%
!! GTGGATTTGTTATTTCATGG+TGG - Chr1:65332300-65332319 None:intergenic 35.0%
!! TGGTTCAGATGTTGATAACA+AGG + Chr1:65333241-65333260 MsG0180003622.01.T01:CDS 35.0%
!!! ATTTGTTTTGCATGGCAGTA+CGG + Chr1:65332155-65332174 MsG0180003622.01.T01:intron 35.0%
AAACAGTCTCTATTGCTGCA+AGG - Chr1:65331212-65331231 None:intergenic 40.0%
AAAGAATCCGGTTCAAGCAA+TGG + Chr1:65332057-65332076 MsG0180003622.01.T01:CDS 40.0%
AAAGAGGTCATACAGAAGGA+AGG - Chr1:65331619-65331638 None:intergenic 40.0%
AAAGGGAATTATGCATCTGG+TGG + Chr1:65333509-65333528 MsG0180003622.01.T01:CDS 40.0%
AACAAGGTTTCTTCAGACGT+CGG + Chr1:65333257-65333276 MsG0180003622.01.T01:CDS 40.0%
AAGTTATAGGCCTTACTGGT+GGG + Chr1:65336434-65336453 MsG0180003622.01.T01:three_prime_UTR 40.0%
AATCTGGGTCCTATGCATTA+CGG + Chr1:65336075-65336094 MsG0180003622.01.T01:three_prime_UTR 40.0%
ACAACACAAAAAGGGAATCC+AGG - Chr1:65331016-65331035 None:intergenic 40.0%
ACAATGAGGTGAATAATGCC+TGG - Chr1:65333081-65333100 None:intergenic 40.0%
ACCTGGACTGATTATTGTCT+TGG - Chr1:65333409-65333428 None:intergenic 40.0%
ACTTGATATGTCACAGACAC+AGG - Chr1:65334928-65334947 None:intergenic 40.0%
AGACAGGCCACTGAAATAAT+TGG - Chr1:65335680-65335699 None:intergenic 40.0%
AGAGCCTATTAGTGCATTGA+AGG - Chr1:65335843-65335862 None:intergenic 40.0%
AGGTACAGATACACTATTGG+TGG - Chr1:65332562-65332581 None:intergenic 40.0%
AGTAGGGTCCTACAAATCAT+TGG + Chr1:65331770-65331789 MsG0180003622.01.T01:intron 40.0%
ATAAAGCGGAGGTTCTTAGT+TGG + Chr1:65334832-65334851 MsG0180003622.01.T01:intron 40.0%
ATACAGCGGAAAGGAAAACA+GGG - Chr1:65331128-65331147 None:intergenic 40.0%
ATCGAAGTTATAGGCCTTAC+TGG + Chr1:65336430-65336449 MsG0180003622.01.T01:three_prime_UTR 40.0%
ATGCAAATGCTTCCCTAAAG+AGG - Chr1:65332931-65332950 None:intergenic 40.0%
ATGCTTCCCTAAAGAGGAAT+CGG - Chr1:65332925-65332944 None:intergenic 40.0%
ATGGTATTTGACCCTAGTAG+GGG + Chr1:65335346-65335365 MsG0180003622.01.T01:CDS 40.0%
ATGTGAGGAACCTACTACTA+TGG - Chr1:65331162-65331181 None:intergenic 40.0%
CCAGATGCATAATTCCCTTT+AGG - Chr1:65333509-65333528 None:intergenic 40.0%
CCATGCATGACAATACTTTG+TGG - Chr1:65330655-65330674 None:intergenic 40.0%
CCTAAAGGGAATTATGCATC+TGG + Chr1:65333506-65333525 MsG0180003622.01.T01:CDS 40.0%
CTACTAGGGTCAAATACCAT+AGG - Chr1:65335346-65335365 None:intergenic 40.0%
CTATGGTATTTGACCCTAGT+AGG + Chr1:65335344-65335363 MsG0180003622.01.T01:CDS 40.0%
CTCCATCTGTAAATATCAGC+AGG + Chr1:65335296-65335315 MsG0180003622.01.T01:CDS 40.0%
CTGCTGATATTTACAGATGG+AGG - Chr1:65335298-65335317 None:intergenic 40.0%
CTTAGATTCTGAGCACAATG+AGG - Chr1:65333095-65333114 None:intergenic 40.0%
CTTAGGGCAGAGATTTCAAA+AGG - Chr1:65336282-65336301 None:intergenic 40.0%
CTTGGTTCAAATAACCAGTG+GGG + Chr1:65335640-65335659 MsG0180003622.01.T01:CDS 40.0%
GAAGCTAAGCAAACAAGAGT+GGG - Chr1:65336040-65336059 None:intergenic 40.0%
GAAGTGATCCGTTGATACTT+AGG + Chr1:65336680-65336699 MsG0180003622.01.T01:three_prime_UTR 40.0%
GAGCCTATTAGTGCATTGAA+GGG - Chr1:65335842-65335861 None:intergenic 40.0%
GATAGCACAGAATTGCTTGA+TGG - Chr1:65333584-65333603 None:intergenic 40.0%
GTACAGTTGAGGTCCTTAAT+TGG - Chr1:65334377-65334396 None:intergenic 40.0%
GTGGCTGATGATACATGTTT+AGG - Chr1:65331854-65331873 None:intergenic 40.0%
GTTACTGTGACGAAACTTTC+TGG + Chr1:65332648-65332667 MsG0180003622.01.T01:CDS 40.0%
TAAATTATCGCTGCCTTTGC+CGG - Chr1:65333054-65333073 None:intergenic 40.0%
TATGCATCTGGTGGTTGTAA+TGG + Chr1:65333518-65333537 MsG0180003622.01.T01:CDS 40.0%
TCCAAGACAATAATCAGTCC+AGG + Chr1:65333405-65333424 MsG0180003622.01.T01:CDS 40.0%
TCTTCATTGCGACTGAATTG+AGG - Chr1:65335427-65335446 None:intergenic 40.0%
TCTTCTTACAACGGCATCTA+CGG - Chr1:65334557-65334576 None:intergenic 40.0%
TGAAGCTAAGCAAACAAGAG+TGG - Chr1:65336041-65336060 None:intergenic 40.0%
TGCTAACATACATAGCAGGA+TGG + Chr1:65336224-65336243 MsG0180003622.01.T01:intron 40.0%
TGGTATATTGTACTAGGGCA+AGG + Chr1:65332355-65332374 MsG0180003622.01.T01:intron 40.0%
TGTGTGCTAACATACATAGC+AGG + Chr1:65336220-65336239 MsG0180003622.01.T01:intron 40.0%
TTACGGTTGTCAGACATAAC+TGG + Chr1:65336092-65336111 MsG0180003622.01.T01:three_prime_UTR 40.0%
TTCAGGCGACAACACAAAAA+GGG - Chr1:65331024-65331043 None:intergenic 40.0%
TTGCCACTAATGAAAGACAG+AGG - Chr1:65335030-65335049 None:intergenic 40.0%
TTGCTGGACATGATCCTAAA+GGG + Chr1:65333492-65333511 MsG0180003622.01.T01:CDS 40.0%
! ACATGTTTAGGATCATCTGG+TGG - Chr1:65331842-65331861 None:intergenic 40.0%
! ACTTTTGGACACTACTTTGG+TGG - Chr1:65331873-65331892 None:intergenic 40.0%
! GAATAACGGAATACCGAGTT+TGG - Chr1:65336543-65336562 None:intergenic 40.0%
! GATTTTCCTGCTTCAGATGA+TGG - Chr1:65333127-65333146 None:intergenic 40.0%
! GGAATCATTTTGTCTGGCAA+AGG - Chr1:65333435-65333454 None:intergenic 40.0%
! TCATGATGCCAGTTTTCTTG+TGG + Chr1:65333823-65333842 MsG0180003622.01.T01:intron 40.0%
! TGCTTGATGGGAAAGTGTAT+GGG - Chr1:65333571-65333590 None:intergenic 40.0%
! TTGCTTGATGGGAAAGTGTA+TGG - Chr1:65333572-65333591 None:intergenic 40.0%
!! CCACAAAGTATTGTCATGCA+TGG + Chr1:65330652-65330671 MsG0180003622.01.T01:CDS 40.0%
!! GGGTGGTTATTTTCATTTGC+AGG + Chr1:65330616-65330635 MsG0180003622.01.T01:CDS 40.0%
!! GTCTTTGGAACTAGATGCAT+GGG + Chr1:65333307-65333326 MsG0180003622.01.T01:CDS 40.0%
!! TGTCTTTGGAACTAGATGCA+TGG + Chr1:65333306-65333325 MsG0180003622.01.T01:CDS 40.0%
!! TTCATTTGCAGGGCTTGTTT+TGG + Chr1:65330627-65330646 MsG0180003622.01.T01:CDS 40.0%
!!! TAGTGTGAACGCTGACTTTT+TGG + Chr1:65332335-65332354 MsG0180003622.01.T01:intron 40.0%
AAAGAGGAATCGGTCGAGTT+AGG - Chr1:65332915-65332934 None:intergenic 45.0%
AAATTATCGCTGCCTTTGCC+GGG - Chr1:65333053-65333072 None:intergenic 45.0%
AACTTATTCAGCAGCTTCCG+TGG + Chr1:65332692-65332711 MsG0180003622.01.T01:CDS 45.0%
AAGGCTTCCCTGAATGATTC+TGG - Chr1:65333160-65333179 None:intergenic 45.0%
AAGGTTTGCCCCAGGTTAAA+AGG - Chr1:65335400-65335419 None:intergenic 45.0%
AAGTCGGTAAAGCAGAGTGA+AGG - Chr1:65330912-65330931 None:intergenic 45.0%
AATCATTCCAACTTCCCCAC+TGG - Chr1:65335657-65335676 None:intergenic 45.0%
ACAAAAAGGGAATCCAGGCT+GGG - Chr1:65331011-65331030 None:intergenic 45.0%
ACCATAATAACCGCCAAGGT+CGG - Chr1:65336160-65336179 None:intergenic 45.0%
ACTCACCATAATAACCGCCA+AGG - Chr1:65336164-65336183 None:intergenic 45.0%
ACTTATTCAGCAGCTTCCGT+GGG + Chr1:65332693-65332712 MsG0180003622.01.T01:CDS 45.0%
AGATCAAATGGAGGAGAGTC+AGG + Chr1:65334579-65334598 MsG0180003622.01.T01:CDS 45.0%
AGGAAGCTTGTACTCACAGA+AGG - Chr1:65332741-65332760 None:intergenic 45.0%
AGTCGGTAAAGCAGAGTGAA+GGG - Chr1:65330911-65330930 None:intergenic 45.0%
AGTTCATCTTCATCACGTGC+TGG + Chr1:65332408-65332427 MsG0180003622.01.T01:CDS 45.0%
ATGAGGTGAATAATGCCTGG+AGG - Chr1:65333078-65333097 None:intergenic 45.0%
ATGTCAGACAGAATACCACC+TGG + Chr1:65335082-65335101 MsG0180003622.01.T01:CDS 45.0%
CAAATAACCAGTGGGGAAGT+TGG + Chr1:65335647-65335666 MsG0180003622.01.T01:CDS 45.0%
CTTCTTACAACGGCATCTAC+GGG - Chr1:65334556-65334575 None:intergenic 45.0%
GAAGTTATAGGCCTTACTGG+TGG + Chr1:65336433-65336452 MsG0180003622.01.T01:three_prime_UTR 45.0%
GACTGTGATCAACAACAACC+CGG + Chr1:65333032-65333051 MsG0180003622.01.T01:CDS 45.0%
GATACAGCGGAAAGGAAAAC+AGG - Chr1:65331129-65331148 None:intergenic 45.0%
GATTGCCGTTGACCATTTGA+TGG - Chr1:65336013-65336032 None:intergenic 45.0%
GCATGAATTTCCCACCAGTA+AGG - Chr1:65336447-65336466 None:intergenic 45.0%
GCGACTGAATTGAGGAAGTA+AGG - Chr1:65335419-65335438 None:intergenic 45.0%
GGTCAAAAGACAACTAGCTG+AGG - Chr1:65331383-65331402 None:intergenic 45.0%
GTCTGACAACCGTAATGCAT+AGG - Chr1:65336087-65336106 None:intergenic 45.0%
GTTCAGGCGACAACACAAAA+AGG - Chr1:65331025-65331044 None:intergenic 45.0%
GTTGCTGGACATGATCCTAA+AGG + Chr1:65333491-65333510 MsG0180003622.01.T01:CDS 45.0%
GTTTCAAATCGGGATGTGCA+TGG + Chr1:65332801-65332820 MsG0180003622.01.T01:CDS 45.0%
TAAGCAAACAAGAGTGGGTG+AGG - Chr1:65336035-65336054 None:intergenic 45.0%
TACGCCTAGTGATGTACGTA+AGG - Chr1:65331061-65331080 None:intergenic 45.0%
TCATGCATGGCTCAGAAATG+TGG + Chr1:65330665-65330684 MsG0180003622.01.T01:CDS 45.0%
TGCACTAATAGGCTCTCAGA+TGG + Chr1:65335847-65335866 MsG0180003622.01.T01:three_prime_UTR 45.0%
TGTATCTGGCAGTCTTCCAA+AGG + Chr1:65332380-65332399 MsG0180003622.01.T01:CDS 45.0%
TGTCAGACAGAATACCACCT+GGG + Chr1:65335083-65335102 MsG0180003622.01.T01:CDS 45.0%
TGTGGCTGCAAATGTTCAAC+TGG - Chr1:65335268-65335287 None:intergenic 45.0%
TTCTGTGAGTACAAGCTTCC+TGG + Chr1:65332740-65332759 MsG0180003622.01.T01:CDS 45.0%
TTGTCTGGCAAAGGAAAACC+TGG - Chr1:65333426-65333445 None:intergenic 45.0%
! AACTCGACCGATTCCTCTTT+AGG + Chr1:65332915-65332934 MsG0180003622.01.T01:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - Chr1:65334735-65334754 None:intergenic 45.0%
! ACTCGACCGATTCCTCTTTA+GGG + Chr1:65332916-65332935 MsG0180003622.01.T01:CDS 45.0%
! ATCAAGCCATCATCTGAAGC+AGG + Chr1:65333118-65333137 MsG0180003622.01.T01:CDS 45.0%
! ATTCAACCACACCAGCCTTT+TGG + Chr1:65332976-65332995 MsG0180003622.01.T01:CDS 45.0%
! CAACCTAAAGCAGAAGCATG+CGG - Chr1:65332242-65332261 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - Chr1:65334736-65334755 None:intergenic 45.0%
! GCTTCAGATGATGGCTTGAT+TGG - Chr1:65333118-65333137 None:intergenic 45.0%
! GTGCAACCTTTTCTTGACCA+AGG - Chr1:65332719-65332738 None:intergenic 45.0%
! TCTTGGATTTTGCGCAAAGC+AGG - Chr1:65333392-65333411 None:intergenic 45.0%
! TGTTTAGGATCATCTGGTGG+TGG - Chr1:65331839-65331858 None:intergenic 45.0%
! TTCAACCACACCAGCCTTTT+GGG + Chr1:65332977-65332996 MsG0180003622.01.T01:CDS 45.0%
! TTCATCACGTGCTGGTAATC+TGG + Chr1:65332416-65332435 MsG0180003622.01.T01:CDS 45.0%
!! ACTCTGCTTTACCGACTTGT+AGG + Chr1:65330914-65330933 MsG0180003622.01.T01:intron 45.0%
!! ATTTTGGCACTGCTTCCTAC+TGG - Chr1:65330827-65330846 None:intergenic 45.0%
!! GGTGCTTTGAAGGATGTGTA+TGG - Chr1:65333371-65333390 None:intergenic 45.0%
!! TGCAGGAAGTGCTGTTGAAT+TGG - Chr1:65332088-65332107 None:intergenic 45.0%
AAAAAGGGAATCCAGGCTGG+GGG - Chr1:65331009-65331028 None:intergenic 50.0%
ACCAGTACCCTCACTCTTCA+CGG - Chr1:65333225-65333244 None:intergenic 50.0%
ACTAAGTGGGGTAGGCTACA+TGG - Chr1:65334723-65334742 None:intergenic 50.0%
ACTAGGGCAAGGTGTGTATC+TGG + Chr1:65332366-65332385 MsG0180003622.01.T01:intron 50.0%
AGAGAAGACCGTGAAGAGTG+AGG + Chr1:65333214-65333233 MsG0180003622.01.T01:CDS 50.0%
AGGTTGGCACTGTACAGTTG+AGG - Chr1:65334388-65334407 None:intergenic 50.0%
AGTCTCTATTGCTGCAAGGC+TGG - Chr1:65331208-65331227 None:intergenic 50.0%
ATCTTCCCAAAAGGCTGGTG+TGG - Chr1:65332985-65333004 None:intergenic 50.0%
ATGTAGCCTACCCCACTTAG+TGG + Chr1:65334722-65334741 MsG0180003622.01.T01:intron 50.0%
CAAAAAGGGAATCCAGGCTG+GGG - Chr1:65331010-65331029 None:intergenic 50.0%
CACAAAAAGGGAATCCAGGC+TGG - Chr1:65331012-65331031 None:intergenic 50.0%
CATTACCAAGAGTTGGCTGC+AGG - Chr1:65332105-65332124 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr1:65334734-65334753 MsG0180003622.01.T01:intron 50.0%
CCTCCACTATTCCCCTACTA+GGG - Chr1:65335360-65335379 None:intergenic 50.0%
CTACCCCACTTAGTGGGATA+AGG + Chr1:65334729-65334748 MsG0180003622.01.T01:intron 50.0%
CTCATGCTTCAAGTCCACCT+GGG + Chr1:65335053-65335072 MsG0180003622.01.T01:CDS 50.0%
CTGCAGCCAACTCTTGGTAA+TGG + Chr1:65332103-65332122 MsG0180003622.01.T01:intron 50.0%
CTGTCTGACATTGCAAACCC+AGG - Chr1:65335073-65335092 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+AGG - Chr1:65334731-65334750 None:intergenic 50.0%
GAGAAGACCGTGAAGAGTGA+GGG + Chr1:65333215-65333234 MsG0180003622.01.T01:CDS 50.0%
GATCAACAACAACCCGGCAA+AGG + Chr1:65333038-65333057 MsG0180003622.01.T01:CDS 50.0%
GCAGCGATAATTTAGCCTCC+AGG + Chr1:65333060-65333079 MsG0180003622.01.T01:CDS 50.0%
GCAGGATGCCACAAGAAAAC+TGG - Chr1:65333834-65333853 None:intergenic 50.0%
GCTGAAATTGTGTGGCAGTC+TGG + Chr1:65335920-65335939 MsG0180003622.01.T01:three_prime_UTR 50.0%
GGAGGTAAAACACTCCCTGA+AGG - Chr1:65331818-65331837 None:intergenic 50.0%
GGATGTGCATGGCTCATGTT+CGG + Chr1:65332812-65332831 MsG0180003622.01.T01:CDS 50.0%
TAGCCGCATGCTTCTGCTTT+AGG + Chr1:65332236-65332255 MsG0180003622.01.T01:intron 50.0%
TCCTCCACTATTCCCCTACT+AGG - Chr1:65335361-65335380 None:intergenic 50.0%
TCTGACATTGCAAACCCAGG+TGG - Chr1:65335070-65335089 None:intergenic 50.0%
TGACCCTAGTAGGGGAATAG+TGG + Chr1:65335354-65335373 MsG0180003622.01.T01:CDS 50.0%
TGTAGCCTACCCCACTTAGT+GGG + Chr1:65334723-65334742 MsG0180003622.01.T01:intron 50.0%
TTAGCTTCACTGCCAAGCAC+TGG + Chr1:65336052-65336071 MsG0180003622.01.T01:three_prime_UTR 50.0%
TTCTCTAATCCTGCCCCCAA+GGG - Chr1:65333200-65333219 None:intergenic 50.0%
TTGATTCCCAAACCCTGCCA+GGG + Chr1:65332463-65332482 MsG0180003622.01.T01:CDS 50.0%
! ACAGATGGAGGAGCATACTG+TGG - Chr1:65335286-65335305 None:intergenic 50.0%
! ATACCACCTGGGTTTTCTCG+CGG + Chr1:65335094-65335113 MsG0180003622.01.T01:CDS 50.0%
! ATTGATTCCCAAACCCTGCC+AGG + Chr1:65332462-65332481 MsG0180003622.01.T01:CDS 50.0%
! CAAGTGGATTTCGCAAGTGC+TGG - Chr1:65336252-65336271 None:intergenic 50.0%
! CAGCAATCATTTGGGGTTGC+TGG + Chr1:65333476-65333495 MsG0180003622.01.T01:CDS 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr1:65334737-65334756 None:intergenic 50.0%
! CTTTTCTTGACCAAGGCCCA+CGG - Chr1:65332712-65332731 None:intergenic 50.0%
! GTAGGGGAATAGTGGAGGAA+AGG + Chr1:65335362-65335381 MsG0180003622.01.T01:CDS 50.0%
!! ACTGCCAAGCACTGGAATCT+GGG + Chr1:65336060-65336079 MsG0180003622.01.T01:three_prime_UTR 50.0%
!! TTAGGATCATCTGGTGGTGG+AGG - Chr1:65331836-65331855 None:intergenic 50.0%
!!! CAGTACGGCTGCTGTTTTCA+TGG + Chr1:65332170-65332189 MsG0180003622.01.T01:intron 50.0%
!!! TACGGCTGCTGTTTTCATGG+TGG + Chr1:65332173-65332192 MsG0180003622.01.T01:intron 50.0%
AATGTCAGGAGAGCCGACCT+TGG + Chr1:65336144-65336163 MsG0180003622.01.T01:three_prime_UTR 55.0%
AGGACCCAGATTCCAGTGCT+TGG - Chr1:65336067-65336086 None:intergenic 55.0%
CACTTCCTGCAGCCAACTCT+TGG + Chr1:65332097-65332116 MsG0180003622.01.T01:CDS 55.0%
CCCTAGTAGGGGAATAGTGG+AGG + Chr1:65335357-65335376 MsG0180003622.01.T01:CDS 55.0%
CGTGGGCCTTGGTCAAGAAA+AGG + Chr1:65332710-65332729 MsG0180003622.01.T01:CDS 55.0%
CTTCTCTAATCCTGCCCCCA+AGG - Chr1:65333201-65333220 None:intergenic 55.0%
GAGGAAGTAAGGTTTGCCCC+AGG - Chr1:65335408-65335427 None:intergenic 55.0%
GCCGACCTTGGCGGTTATTA+TGG + Chr1:65336156-65336175 MsG0180003622.01.T01:three_prime_UTR 55.0%
GCGCAAAGCAGGTGCTTTGA+AGG - Chr1:65333381-65333400 None:intergenic 55.0%
GCTCATGCTTCAAGTCCACC+TGG + Chr1:65335052-65335071 MsG0180003622.01.T01:CDS 55.0%
GGCAGCTCCATTGCTTGAAC+CGG - Chr1:65332067-65332086 None:intergenic 55.0%
TGATTCCCAAACCCTGCCAG+GGG + Chr1:65332464-65332483 MsG0180003622.01.T01:CDS 55.0%
TTTACTGAACCCTTGGGGGC+AGG + Chr1:65333188-65333207 MsG0180003622.01.T01:CDS 55.0%
! ACCGTGAAGAGTGAGGGTAC+TGG + Chr1:65333221-65333240 MsG0180003622.01.T01:CDS 55.0%
! TACCACCTGGGTTTTCTCGC+GGG + Chr1:65335095-65335114 MsG0180003622.01.T01:CDS 55.0%
!! CACTGCCAAGCACTGGAATC+TGG + Chr1:65336059-65336078 MsG0180003622.01.T01:three_prime_UTR 55.0%
ACTCTCCCGCGAGAAAACCC+AGG - Chr1:65335103-65335122 None:intergenic 60.0%
CATGTGGTGCGGTGATCTCC+AGG - Chr1:65332761-65332780 None:intergenic 60.0%
GGCTCTCAGATGGCAGTGTG+TGG + Chr1:65335857-65335876 MsG0180003622.01.T01:three_prime_UTR 60.0%
AAGCAGCCCCTGGCAGGGTT+TGG - Chr1:65332473-65332492 None:intergenic 65.0%
AGCAGCCCCTGGCAGGGTTT+GGG - Chr1:65332472-65332491 None:intergenic 65.0%
CAGGGGCTGCTTGCACCGAA+AGG + Chr1:65332481-65332500 MsG0180003622.01.T01:CDS 65.0%
CTCCCGCGAGAAAACCCAGG+TGG - Chr1:65335100-65335119 None:intergenic 65.0%
GGTCAACTATGCCCCCAGCC+TGG + Chr1:65330995-65331014 MsG0180003622.01.T01:intron 65.0%
GTCAGGAGAGCCGACCTTGG+CGG + Chr1:65336147-65336166 MsG0180003622.01.T01:three_prime_UTR 65.0%
TCAGCAGCTTCCGTGGGCCT+TGG + Chr1:65332699-65332718 MsG0180003622.01.T01:CDS 65.0%
! CTTTCGGTGCAAGCAGCCCC+TGG - Chr1:65332483-65332502 None:intergenic 65.0%
GGTGCAAGCAGCCCCTGGCA+GGG - Chr1:65332478-65332497 None:intergenic 70.0%
CGGTGCAAGCAGCCCCTGGC+AGG - Chr1:65332479-65332498 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 65330611 65336742 65330611 ID=MsG0180003622.01;Name=MsG0180003622.01
Chr1 mRNA 65330611 65336742 65330611 ID=MsG0180003622.01.T01;Parent=MsG0180003622.01;Name=MsG0180003622.01.T01;_AED=0.33;_eAED=0.39;_QI=0|0.57|0.37|1|0.42|0.25|8|750|773
Chr1 exon 65330611 65330686 65330611 ID=MsG0180003622.01.T01:exon:50545;Parent=MsG0180003622.01.T01
Chr1 exon 65331822 65331901 65331822 ID=MsG0180003622.01.T01:exon:50546;Parent=MsG0180003622.01.T01
Chr1 exon 65332048 65332118 65332048 ID=MsG0180003622.01.T01:exon:50547;Parent=MsG0180003622.01.T01
Chr1 exon 65332371 65333695 65332371 ID=MsG0180003622.01.T01:exon:50548;Parent=MsG0180003622.01.T01
Chr1 exon 65334500 65334610 65334500 ID=MsG0180003622.01.T01:exon:50549;Parent=MsG0180003622.01.T01
Chr1 exon 65335005 65335145 65335005 ID=MsG0180003622.01.T01:exon:50550;Parent=MsG0180003622.01.T01
Chr1 exon 65335269 65336177 65335269 ID=MsG0180003622.01.T01:exon:50551;Parent=MsG0180003622.01.T01
Chr1 exon 65336384 65336742 65336384 ID=MsG0180003622.01.T01:exon:50552;Parent=MsG0180003622.01.T01
Chr1 CDS 65330611 65330686 65330611 ID=MsG0180003622.01.T01:cds;Parent=MsG0180003622.01.T01
Chr1 CDS 65331822 65331901 65331822 ID=MsG0180003622.01.T01:cds;Parent=MsG0180003622.01.T01
Chr1 CDS 65332048 65332118 65332048 ID=MsG0180003622.01.T01:cds;Parent=MsG0180003622.01.T01
Chr1 CDS 65332371 65333695 65332371 ID=MsG0180003622.01.T01:cds;Parent=MsG0180003622.01.T01
Chr1 CDS 65334500 65334610 65334500 ID=MsG0180003622.01.T01:cds;Parent=MsG0180003622.01.T01
Chr1 CDS 65335005 65335145 65335005 ID=MsG0180003622.01.T01:cds;Parent=MsG0180003622.01.T01
Chr1 CDS 65335269 65335786 65335269 ID=MsG0180003622.01.T01:cds;Parent=MsG0180003622.01.T01
Chr1 three_prime_UTR 65335787 65336177 65335787 ID=MsG0180003622.01.T01:three_prime_utr;Parent=MsG0180003622.01.T01
Chr1 three_prime_UTR 65336384 65336742 65336384 ID=MsG0180003622.01.T01:three_prime_utr;Parent=MsG0180003622.01.T01
Gene Sequence

>MsG0180003622.01.T01

ATGATGGGTGGTTATTTTCATTTGCAGGGCTTGTTTTGGAACCACAAAGTATTGTCATGCATGGCTCAGAAATGTGGGAGTGTTTTACCTCCACCACCAGATGATCCTAAACATGTATCATCAGCCACCAAAGTAGTGTCCAAAAGTTCTTTAGATAACCAGATTAAAGAATCCGGTTCAAGCAATGGAGCTGCCAATTCAACAGCACTTCCTGCAGCCAACTCTTGGGCAAGGTGTGTATCTGGCAGTCTTCCAAAGGATACTAGTTCATCTTCATCACGTGCTGGTAATCTGGTCAATAGAAAGATTGAAGCATCTATTGATTCCCAAACCCTGCCAGGGGCTGCTTGCACCGAAAGGTCTATTCTTGATACAAAAAAATCAGGGGAAGTTAAAGACAGCTCTGACGTGCATTCCACCAATAGTGTATCTGTACCTTCAGAGTTGAACAAACATCACATTGGTGGAAATTTTCAAACATGTGAGTCAATTGTTATCAATGAGGTTACTGTGACGAAACTTTCTGGCATTATTTTGTCTAACTGTGAAACTTATTCAGCAGCTTCCGTGGGCCTTGGTCAAGAAAAGGTTGCACCTTCTGTGAGTACAAGCTTCCTGGAGATCACCGCACCACATGATTTGAATACTAACAAGGCAGTTTCAAATCGGGATGTGCATGGCTCATGTTCGGAGTTATCATCTGTTAGCATCAACAGTCATCTTGAAGATTCATATTTCACTCGGGATTCGGACAGAATACTTTTTACTCCTAACTCGACCGATTCCTCTTTAGGGAAGCATTTGCATCAAGATAATGAGTATTGTAAAGATCATTCAACCACACCAGCCTTTTGGGAAGATATAATTGTGGATGATATGCTAAACAAAGACTGTGATCAACAACAACCCGGCAAAGGCAGCGATAATTTAGCCTCCAGGCATTATTCACCTCATTGTGCTCAGAATCTAAGCCAATCAAGCCATCATCTGAAGCAGGAAAATCAAATTCGTAACCAGAATCATTCAGGGAAGCCTTCTGAATATTTTACTGAACCCTTGGGGGCAGGATTAGAGAAGACCGTGAAGAGTGAGGGTACTGGTTCAGATGTTGATAACAAGGTTTCTTCAGACGTCGGCGAAAACAACATTATATCTAACATTTTGTCTTTGGAACTAGATGCATGGGAAGATTCAATAGTTAAGTTGTTGGATGAAAGTGATGAGCCATACACATCCTTCAAAGCACCTGCTTTGCGCAAAATCCAAGACAATAATCAGTCCAGGTTTTCCTTTGCCAGACAAAATGATTCCTTGAATAAAACCTCTGATTTGCAGCAATCATTTGGGGTTGCTGGACATGATCCTAAAGGGAATTATGCATCTGGTGGTTGTAATGGAAACAAAGACATGTTCGCTGTGAAACACCCATACACTTTCCCATCAAGCAATTCTGTGCTATCGGATAAATTTGATGGAAGTCTGTCTTTGGCGCCCTCTAAATTTTCCAGTGAGTTTTTTTATTTTTTTTATTTTGAAGAATTTCCCAATGTGTGTGCTAAGTTGGTAGAAAATAGGCTTAGATGGTTTGGACATGTAGAGAGAAGACCCGTAGATGCCGTTGTAAGAAGAGTAGATCAAATGGAGGAGAGTCAGGTTAAAAGAGTTTTGATCAAACTGATATTTTTCCTCTGTCTTTCATTAGTGGCAAAAGCTCATGCTTCAAGTCCACCTGGGTTTGCAATGTCAGACAGAATACCACCTGGGTTTTCTCGCGGGAGAGTAGAACAGAGTTGTAATAGTTCTGTTGAACATTTGCAGCCACAGTATGCTCCTCCATCTGTAAATATCAGCAGGATAGGAAATGTTGAGTTCAAGAATCCTATGGTATTTGACCCTAGTAGGGGAATAGTGGAGGAAAGGCTGAATAGTACACCTTTTAACCTGGGGCAAACCTTACTTCCTCAATTCAGTCGCAATGAAGATGATGCTAGACTTAAGCTGTTAATACAACAACAATCTACAGCTTCGCAGAATTCAAGACTTTCAGATCATATTGGAAATAGGTTTTCACCTCAAAGTGATGCTTATAGAACTAATTCGAGGTTTCTCGATCAATTTCAGTCTAACACACCATTTTCTGAACAACTGCATTCTCAACAGTTCAGTAGTAATATTCTTGGTTCAAATAACCAGTGGGGAAGTTGGAATGATTCCAATTATTTCAGTGGCCTGTCTATGTCTGAAGTATTGAATAATGAAATAGGGGGATTCAACAATTTCATGCCTAGTTATGAGAATATCAAGTTTAAGCACCTGAATTGA
Protein sequence

>MsG0180003622.01.T01

MMGGYFHLQGLFWNHKVLSCMAQKCGSVLPPPPDDPKHVSSATKVVSKSSLDNQIKESGSSNGAANSTALPAANSWARCVSGSLPKDTSSSSSRAGNLVNRKIEASIDSQTLPGAACTERSILDTKKSGEVKDSSDVHSTNSVSVPSELNKHHIGGNFQTCESIVINEVTVTKLSGIILSNCETYSAASVGLGQEKVAPSVSTSFLEITAPHDLNTNKAVSNRDVHGSCSELSSVSINSHLEDSYFTRDSDRILFTPNSTDSSLGKHLHQDNEYCKDHSTTPAFWEDIIVDDMLNKDCDQQQPGKGSDNLASRHYSPHCAQNLSQSSHHLKQENQIRNQNHSGKPSEYFTEPLGAGLEKTVKSEGTGSDVDNKVSSDVGENNIISNILSLELDAWEDSIVKLLDESDEPYTSFKAPALRKIQDNNQSRFSFARQNDSLNKTSDLQQSFGVAGHDPKGNYASGGCNGNKDMFAVKHPYTFPSSNSVLSDKFDGSLSLAPSKFSSEFFYFFYFEEFPNVCAKLVENRLRWFGHVERRPVDAVVRRVDQMEESQVKRVLIKLIFFLCLSLVAKAHASSPPGFAMSDRIPPGFSRGRVEQSCNSSVEHLQPQYAPPSVNISRIGNVEFKNPMVFDPSRGIVEERLNSTPFNLGQTLLPQFSRNEDDARLKLLIQQQSTASQNSRLSDHIGNRFSPQSDAYRTNSRFLDQFQSNTPFSEQLHSQQFSSNILGSNNQWGSWNDSNYFSGLSMSEVLNNEIGGFNNFMPSYENIKFKHLN*